Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
MACROD2_chr20_13990516_16058197	14273798	A A	AAAGAATC others(6): Show AAAGAATCAAATAG	intron_variant intron_variant	MODIFIER	NA18970.hp2 NA18970.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0008 a0002c0002t0008	a0002c0002t0008g0023 a0002c0002t0008g0023	1	24	0.0417	13	c.271 others(34): Show c.271+188071_271+188072insAGAATCAAATAGA	MACROD2	ENSG00000172264.19	transcript	ENST00000684519.1	protein_coding	3/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
MACROD2_chr20_13990516_16058197	14575017	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0008 a0001c0001t0004g0008	1	24	0.0417	13	c.301 others(32): Show c.301+81522_301+81534dupAAAAAAAAAAAAA	MACROD2	ENSG00000172264.19	transcript	ENST00000684519.1	protein_coding	4/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
MACROD2_chr20_13990516_16058197	14930161	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0006 a0003c0003t0006	a0003c0003t0006g0019 a0003c0003t0006g0019	1	24	0.0417	13	c.418 others(34): Show c.418+245203_418+245215dupAAAAAAAAAAAAA	MACROD2	ENSG00000172264.19	transcript	ENST00000684519.1	protein_coding	5/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
MACROD2_chr20_13990516_16058197	15101534	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0001 a0001c0001t0003g0001	1	24	0.0417	13	c.419 others(34): Show c.419-128404_419-128392dupAAAAAAAAAAAAA	MACROD2	ENSG00000172264.19	transcript	ENST00000684519.1	protein_coding	5/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
MACROD2_chr20_13990516_16058197	15206721	G G	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0017 a0002c0002t0001g0017	1	24	0.0417	13	c.419 others(32): Show c.419-23205_419-23193dupTTTTTTTTTTTTT	MACROD2	ENSG00000172264.19	transcript	ENST00000684519.1	protein_coding	5/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
MACROD2_chr20_13990516_16058197	15461006	A A	ATATATAT others(6): Show ATATATATTTTTTT	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0017 a0002c0002t0001g0017	1	24	0.0417	13	c.571 others(32): Show c.571+29572_571+29573insATATATTTTTTTT	MACROD2	ENSG00000172264.19	transcript	ENST00000684519.1	protein_coding	7/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
MACROD2_chr20_13990516_16058197	15560762	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0008 a0001c0001t0004g0008	1	24	0.0417	13	c.645 others(32): Show c.645+60932_645+60944dupAAAAAAAAAAAAA	MACROD2	ENSG00000172264.19	transcript	ENST00000684519.1	protein_coding	8/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
MACROD2_chr20_13990516_16058197	15729831	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01081.hp1 HG01081.hp2 others(5): Show HG00738.hp1 HG01081.hp1 HG01081.hp2 HG01168.hp1 HG02559.hp2 NA19030.hp1 NA19043.hp1 NA19043.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0013 a0002c0002t0001 a0002c0002t0002 a0003c0003t0006	a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0002g0015 others(5): Show a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0002g0015 a0001c0001t0004g0016 a0001c0001t0013g0006 a0002c0002t0001g0018 a0002c0002t0002g0022 a0003c0003t0006g0019	8	24	0.3333	13	c.646 others(34): Show c.646-132911_646-132899dupTTTTTTTTTTTTT	MACROD2	ENSG00000172264.19	transcript	ENST00000684519.1	protein_coding	8/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
MACROD2_chr20_13990516_16058197	15782717	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp2 HG00738.hp1 HG00738.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0009 a0003c0003t0006 a0001c0001t0009 a0003c0003t0006	a0001c0001t0009g0005 a0003c0003t0006g0019 a0001c0001t0009g0005 a0003c0003t0006g0019	2	24	0.0833	13	c.646 others(32): Show c.646-80018_646-80006dupAAAAAAAAAAAAA	MACROD2	ENSG00000172264.19	transcript	ENST00000684519.1	protein_coding	8/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
MACROD2_chr20_13990516_16058197	15819297	G G	GTATATAA others(6): Show GTATATAAAGTATA	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01168.hp1 HG00738.hp1 HG01168.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0013 a0003c0003t0006 a0001c0001t0013 a0003c0003t0006	a0001c0001t0013g0006 a0003c0003t0006g0019 a0001c0001t0013g0006 a0003c0003t0006g0019	2	24	0.0833	13	c.646 others(32): Show c.646-43440_646-43439insGTATATATATAAA	MACROD2	ENSG00000172264.19	transcript	ENST00000684519.1	protein_coding	8/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
MACROH2A1_chr5_135329381_135404231	135336516	A A	AGCCACAG others(6): Show AGCCACAGAGCACG	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00408.hp2 HG00423.hp1 others(144): Show HG00140.hp2 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00438.hp2 HG00621.hp2 HG00642.hp2 HG00733.hp1 HG00735.hp1 HG01069.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01099.hp1 HG01099.hp2 HG01167.hp2 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01496.hp2 HG01884.hp1 HG01884.hp2 HG01928.hp2 HG01978.hp1 HG02004.hp2 HG02027.hp1 HG02055.hp1 HG02056.hp1 HG02080.hp2 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02165.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03669.hp1 HG03710.hp1 HG03710.hp2 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp2 NA18940.hp1 NA18948.hp2 NA18949.hp1 NA18962.hp1 NA18966.hp1 NA18968.hp1 NA18969.hp2 NA18978.hp1 NA18978.hp2 NA18983.hp2 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18995.hp2 NA18998.hp2 NA19003.hp1 NA19003.hp2 NA19007.hp1 NA19010.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp2 NA19060.hp1 NA19063.hp2 NA19065.hp1 NA19070.hp2 NA19076.hp1 NA19088.hp2 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0006	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0002t0001 a0001c0002t0002 a0001c0003t0002 a0001c0004t0001 a0001c0006t0001	a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0008 others(123): Show a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0039 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0061 a0001c0001t0001g0068 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0107 a0001c0001t0001g0109 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0001g0120 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0148 a0001c0001t0001g0153 a0001c0001t0001g0157 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0003g0005 a0001c0001t0003g0016 a0001c0001t0003g0154 a0001c0001t0003g0155 a0001c0001t0003g0156 a0001c0001t0004g0020 a0001c0002t0001g0052 a0001c0002t0001g0133 a0001c0002t0001g0158 a0001c0002t0001g0159 a0001c0002t0001g0160 a0001c0002t0001g0161 a0001c0002t0001g0162 a0001c0002t0001g0163 a0001c0002t0001g0164 a0001c0002t0001g0165 a0001c0002t0001g0166 a0001c0002t0001g0167 a0001c0002t0001g0168 a0001c0002t0001g0169 a0001c0002t0001g0170 a0001c0002t0001g0171 a0001c0002t0001g0172 a0001c0002t0001g0191 a0001c0002t0002g0024 a0001c0002t0002g0025 a0001c0002t0002g0026 a0001c0002t0002g0027 a0001c0002t0002g0079 a0001c0002t0002g0134 a0001c0002t0002g0149 a0001c0002t0002g0177 a0001c0002t0002g0178 a0001c0002t0002g0179 a0001c0003t0002g0001 a0001c0003t0002g0003 a0001c0003t0002g0007 a0001c0003t0002g0028 a0001c0003t0002g0030 a0001c0003t0002g0031 a0001c0003t0002g0032 a0001c0003t0002g0127 a0001c0003t0002g0192 a0001c0004t0001g0137 a0001c0006t0001g0193	147	220	0.6682	13	c.954 others(30): Show c.954-1376_954-1375insCGTGCTCTGTGGC	MACROH2A1	ENSG00000113648.17	transcript	ENST00000511689.6	protein_coding	8/8			chr5	TogoVar
MACROH2A1_chr5_135329381_135404231	135336516	A A	AGCCACAG others(6): Show AGCCACAGAGCATG	intron_variant intron_variant	MODIFIER	HG02055.hp2 NA19030.hp1 NA20129.hp2 HG02055.hp2 NA19030.hp1 NA20129.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0018 a0001c0002t0002g0176 a0001c0002t0002g0018 a0001c0002t0002g0176	3	220	0.0136	13	c.954 others(30): Show c.954-1376_954-1375insCATGCTCTGTGGC	MACROH2A1	ENSG00000113648.17	transcript	ENST00000511689.6	protein_coding	8/8			chr5	TogoVar
MAD1L1_chr7_1810795_2237945	1832640	G G	GGGGGGGG others(6): Show GGGGGGGGGGGGGT	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0161 a0001c0001t0001g0161	1	264	0.0038	13	c.199 others(34): Show c.1999-16413_1999-16412insACCCCCCCCCCCC	MAD1L1	ENSG00000002822.16	transcript	ENST00000265854.12	protein_coding	18/18			chr7	TogoVar
MAD2L1_chr4_120050623_120071848	120055476	G G	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG03453.hp2 HG00099.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0037 a0001c0001t0001 a0001c0001t0037	a0001c0001t0001g0027 a0001c0001t0037g0044 a0001c0001t0001g0027 a0001c0001t0037g0044	2	382	0.0052	13	c.46 others(24): Show c.4641_*4642insAAAAAAAAAAAAA	MAD2L1	ENSG00000164109.14	transcript	ENST00000296509.11	protein_coding		146		chr4	TogoVar
MADD_chr11_47265133_47335031	47281850	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03098.hp2 NA19067.hp2 NA19068.hp2 HG03098.hp2 NA19067.hp2 NA19068.hp2	a0001 a0002 a0001 a0002	a0001c0004 a0002c0001 a0001c0004 a0002c0001	a0001c0004t0002 a0002c0001t0001 a0001c0004t0002 a0002c0001t0001	a0001c0004t0002g0164 a0002c0001t0001g0077 a0002c0001t0001g0137 a0001c0004t0002g0164 a0002c0001t0001g0077 a0002c0001t0001g0137	3	344	0.0087	13	c.146 others(30): Show c.1469+107_1469+108insTTTTTTTTTTTTT	MADD	ENSG00000110514.20	transcript	ENST00000706887.1	protein_coding	8/36		INFO_REALIGN_3_PRIME	chr11	TogoVar
MAGEA6_chrX_152761136_152774689	152770761	G G	GTTTTGTT others(6): Show GTTTTGTTGCGTAA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19000.hp1 NA19000.hp1	a0000 a0000	a0000c0015 a0000c0015	a0000c0015t0002 a0000c0015t0002	a0000c0015t0002g0034 a0000c0015t0002g0034	1	183	0.0055	13	c.-12 others(24): Show c.-1240_-1239insTTACGCAACAAAA	MAGEA6	ENSG00000197172.11	transcript	ENST00000329342.10	protein_coding		1073		chrX	TogoVar
MAGEA8_chrX_149876183_149890825	149881591	A A	AGGCATGG others(6): Show AGGCATGGCGGCCG	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00597.hp2 HG00733.hp1 others(76): Show HG00597.hp1 HG00597.hp2 HG00733.hp1 HG00735.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp1 HG01099.hp1 HG01106.hp1 HG01243.hp1 HG01346.hp2 HG01496.hp1 HG01884.hp2 HG02015.hp1 HG02056.hp1 HG02109.hp1 HG02132.hp1 HG02135.hp1 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02257.hp2 HG02280.hp2 HG02451.hp1 HG02559.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02683.hp2 HG02717.hp1 HG02818.hp1 HG02922.hp1 HG02965.hp1 HG03041.hp1 HG03239.hp2 HG03490.hp1 HG03491.hp1 HG03579.hp1 HG03669.hp1 HG03710.hp1 HG03834.hp2 HG03927.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18612.hp1 NA18950.hp2 NA18953.hp1 NA18956.hp2 NA18963.hp1 NA18966.hp1 NA18970.hp1 NA18974.hp1 NA18978.hp1 NA18978.hp2 NA18983.hp1 NA18986.hp1 NA18990.hp1 NA18994.hp1 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19002.hp2 NA19005.hp1 NA19007.hp1 NA19011.hp1 NA19030.hp1 NA19030.hp2 NA19058.hp1 NA19060.hp1 NA19064.hp2 NA19066.hp1 NA19077.hp1 NA19081.hp1 NA19082.hp1 NA19091.hp1 NA20300.hp2 NA20752.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0002c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0008 a0001c0002t0001 a0001c0003t0001 a0002c0004t0001	a0001c0001t0001g0002 a0001c0001t0001g0014 a0001c0001t0001g0015 others(10): Show a0001c0001t0001g0002 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0002g0002 a0001c0001t0004g0002 a0001c0001t0006g0002 a0001c0001t0008g0002 a0001c0002t0001g0002 a0001c0003t0001g0008 a0002c0004t0001g0002	79	287	0.2753	13	c.-12 others(30): Show c.-126+375_-126+387dupATGGCGGCCGGGC	MAGEA8	ENSG00000156009.10	transcript	ENST00000286482.6	protein_coding	1/2		INFO_REALIGN_3_PRIME	chrX	TogoVar
MAGED4_chrX_52179888_52197268	52193869	G G	GCTGCTGG others(6): Show GCTGCTGGACTCCT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18980.hp1 NA18980.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0033 a0001c0001t0001g0033	1	220	0.0046	13	c.18 others(24): Show c.1803_*1804insCTGCTGGACTCCT	MAGED4	ENSG00000154545.17	transcript	ENST00000471932.6	protein_coding		1602		chrX	TogoVar
MAGI1_chr3_65348526_66043918	65395636	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0010 a0002c0002t0010	a0002c0002t0010g0013 a0002c0002t0010g0013	1	104	0.0096	13	c.220 others(32): Show c.2200-4291_2200-4279dupTTTTTTTTTTTTT	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	13/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65680795	T T	TATGATAT others(6): Show TATGATATGATATG	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG03041.hp1 HG03195.hp1 others(3): Show HG02572.hp1 HG03041.hp1 HG03195.hp1 HG03209.hp2 HG03540.hp1 NA20300.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0005 a0004c0004 a0001c0001 a0001c0005 a0004c0004	a0001c0001t0001 a0001c0001t0009 a0001c0005t0001 others(1): Show a0001c0001t0001 a0001c0001t0009 a0001c0005t0001 a0004c0004t0012	a0001c0001t0001g0071 a0001c0001t0001g0091 a0001c0001t0001g0096 others(3): Show a0001c0001t0001g0071 a0001c0001t0001g0091 a0001c0001t0001g0096 a0001c0001t0009g0007 a0001c0005t0001g0027 a0004c0004t0012g0103	6	104	0.0577	13	c.314 others(32): Show c.314-58708_314-58707insCATATCATATCAT	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	1/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65735383	G G	GTGTGTGT others(6): Show GTGTGTGTGTGTAC	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG03942.hp1 HG00735.hp2 HG03942.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0064 a0002c0002t0001g0069 a0001c0001t0001g0064 a0002c0002t0001g0069	2	104	0.0192	13	c.314 others(34): Show c.314-113296_314-113295insGTACACACACACA	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	1/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65778430	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01258.hp1 HG01261.hp2 others(3): Show HG00738.hp2 HG01258.hp1 HG01261.hp2 HG03492.hp1 HG03492.hp2 NA19240.hp1	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0001 a0001c0005 a0002c0002 others(1): Show a0001c0001 a0001c0005 a0002c0002 a0006c0008	a0001c0001t0001 a0001c0001t0002 a0001c0005t0001 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0005t0001 a0002c0002t0001 a0006c0008t0001	a0001c0001t0001g0033 a0001c0001t0001g0089 a0001c0001t0002g0024 others(3): Show a0001c0001t0001g0033 a0001c0001t0001g0089 a0001c0001t0002g0024 a0001c0005t0001g0006 a0002c0002t0001g0061 a0006c0008t0001g0092	6	104	0.0577	13	c.314 others(34): Show c.314-156355_314-156343dupTTTTTTTTTTTTT	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	1/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65798631	A A	ATCTAAGG others(6): Show ATCTAAGGCAACCC	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp2 HG01071.hp1 others(31): Show HG00738.hp1 HG00738.hp2 HG01071.hp1 HG01071.hp2 HG01123.hp2 HG01167.hp1 HG01192.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp2 HG01891.hp1 HG01952.hp1 HG01952.hp2 HG02055.hp2 HG02486.hp2 HG02572.hp1 HG02622.hp2 HG02698.hp1 HG02896.hp2 HG02970.hp2 HG03041.hp1 HG03098.hp1 HG03195.hp2 HG03225.hp1 HG03225.hp2 HG03492.hp2 NA18747.hp2 NA18906.hp2 NA19030.hp1 NA19240.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA20805.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0005 a0006 a0008	a0001c0001 a0002c0002 a0003c0003 others(4): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0005c0006 a0006c0008 a0008c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0009 a0002c0002t0001 a0002c0002t0003 a0003c0003t0001 a0004c0004t0012 a0005c0006t0001 a0006c0008t0001 a0008c0010t0001	a0001c0001t0001g0003 a0001c0001t0001g0015 a0001c0001t0001g0016 others(31): Show a0001c0001t0001g0003 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0037 a0001c0001t0001g0040 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0059 a0001c0001t0001g0063 a0001c0001t0001g0082 a0001c0001t0001g0096 a0001c0001t0001g0101 a0001c0001t0002g0024 a0001c0001t0002g0065 a0001c0001t0003g0029 a0001c0001t0003g0046 a0001c0001t0004g0001 a0001c0001t0009g0007 a0002c0002t0001g0023 a0002c0002t0001g0039 a0002c0002t0001g0049 a0002c0002t0001g0061 a0002c0002t0003g0050 a0003c0003t0001g0012 a0003c0003t0001g0081 a0003c0003t0001g0099 a0004c0004t0012g0103 a0005c0006t0001g0054 a0005c0006t0001g0095 a0005c0006t0001g0100 a0006c0008t0001g0092 a0008c0010t0001g0067	34	104	0.3269	13	c.314 others(34): Show c.314-176544_314-176543insGGGTTGCCTTAGA	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	1/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65910855	C C	CATTTTTT others(6): Show CATTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02155.hp2 HG02155.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0044 a0002c0002t0001g0044	1	104	0.0096	13	c.313 others(34): Show c.313+127140_313+127141insAAAAAAAAAAAAT	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	1/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65910855	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG01192.hp1 HG01261.hp2 others(17): Show HG00140.hp1 HG01192.hp1 HG01261.hp2 HG01361.hp2 HG01891.hp2 HG02040.hp2 HG02145.hp2 HG02622.hp1 HG02630.hp1 HG02965.hp1 HG02965.hp2 HG03139.hp1 HG03453.hp1 HG03453.hp2 HG03540.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 NA18522.hp1 NA19030.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0007	a0001c0001 a0002c0002 a0003c0003 others(3): Show a0001c0001 a0002c0002 a0003c0003 a0003c0009 a0004c0004 a0007c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0002c0002t0001 a0002c0002t0002 a0002c0002t0010 a0003c0003t0002 a0003c0009t0001 a0004c0004t0001 a0007c0007t0003	a0001c0001t0001g0002 a0001c0001t0001g0051 a0001c0001t0001g0052 others(17): Show a0001c0001t0001g0002 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0058 a0001c0001t0001g0075 a0001c0001t0001g0079 a0001c0001t0002g0024 a0001c0001t0003g0029 a0002c0002t0001g0031 a0002c0002t0001g0069 a0002c0002t0001g0083 a0002c0002t0001g0087 a0002c0002t0002g0084 a0002c0002t0010g0013 a0003c0003t0002g0008 a0003c0003t0002g0074 a0003c0003t0002g0080 a0003c0009t0001g0025 a0004c0004t0001g0057 a0007c0007t0003g0062	20	104	0.1923	13	c.313 others(34): Show c.313+127128_313+127140dupAAAAAAAAAAAAA	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	1/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65963313	T T	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp2 HG02896.hp1 others(5): Show HG02572.hp1 HG02572.hp2 HG02896.hp1 HG03041.hp1 HG03041.hp2 HG03209.hp2 NA18522.hp2 NA21309.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0005 a0002c0002 others(1): Show a0001c0001 a0001c0005 a0002c0002 a0004c0004	a0001c0001t0001 a0001c0001t0008 a0001c0001t0009 others(4): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0005t0001 a0002c0002t0002 a0004c0004t0012	a0001c0001t0001g0086 a0001c0001t0001g0091 a0001c0001t0008g0010 others(5): Show a0001c0001t0001g0086 a0001c0001t0001g0091 a0001c0001t0008g0010 a0001c0001t0009g0007 a0001c0001t0011g0102 a0001c0005t0001g0043 a0002c0002t0002g0068 a0004c0004t0012g0103	8	104	0.0769	13	c.313 others(32): Show c.313+74670_313+74682dupTTTTTTTTTTTTT	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	1/22			chr3	TogoVar
MAGI2_chr7_78012055_79458667	78109303	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0005 a0001c0005t0001g0005	1	40	0.0250	13	c.356 others(34): Show c.3567+16378_3567+16390dupTTTTTTTTTTTTT	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	20/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	78227850	T T	TTTGTGTG others(6): Show TTTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0002 a0001c0010t0002	a0001c0010t0002g0021 a0001c0010t0002g0021	1	40	0.0250	13	c.204 others(34): Show c.2048-26658_2048-26657insCACACACACACAA	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	10/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	78367100	A A	ACACACAC others(6): Show ACACACACACACAC	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0029 a0001c0001t0002g0029	1	40	0.0250	13	c.110 others(32): Show c.1103+2055_1103+2056insGTGTGTGTGTGTG	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	7/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	78527006	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00140.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0020 a0001c0001t0002g0020	1	40	0.0250	13	c.539 others(30): Show c.539-5374_539-5362dupTTTTTTTTTTTTT	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	3/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	78529668	G G	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0026 a0001c0002t0001g0026	1	40	0.0250	13	c.539 others(30): Show c.539-8036_539-8024dupAAAAAAAAAAAAA	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	3/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	78704777	T T	TCTTTTTT others(6): Show TCTTTTTTTTTTTC	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00639.hp2 HG00738.hp1 others(14): Show HG00140.hp1 HG00639.hp2 HG00738.hp1 HG01261.hp2 HG02451.hp1 HG02451.hp2 HG02897.hp1 HG02965.hp1 HG03041.hp2 HG03130.hp1 HG03130.hp2 HG03209.hp2 HG03486.hp1 HG03579.hp2 NA18522.hp1 NA18522.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0007 a0001c0010 a0001c0013	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0003t0001 a0001c0003t0003 a0001c0003t0004 a0001c0004t0001 a0001c0005t0001 a0001c0007t0001 a0001c0010t0002 a0001c0013t0001	a0001c0001t0001g0015 a0001c0001t0001g0036 a0001c0001t0002g0006 others(14): Show a0001c0001t0001g0015 a0001c0001t0001g0036 a0001c0001t0002g0006 a0001c0001t0002g0013 a0001c0001t0002g0033 a0001c0002t0001g0008 a0001c0002t0001g0009 a0001c0002t0001g0024 a0001c0002t0001g0026 a0001c0003t0001g0011 a0001c0003t0003g0001 a0001c0003t0004g0002 a0001c0004t0001g0034 a0001c0005t0001g0005 a0001c0007t0001g0040 a0001c0010t0002g0021 a0001c0013t0001g0039	17	40	0.4250	13	c.419 others(32): Show c.419-77539_419-77538insGAAAAAAAAAAAG	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	2/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	78804754	A A	AAAAAACA others(6): Show AAAAAACAAAAAAC	intron_variant intron_variant	MODIFIER	HG02451.hp1 NA18522.hp2 HG02451.hp1 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0013 a0001c0001 a0001c0013	a0001c0001t0002 a0001c0013t0001 a0001c0001t0002 a0001c0013t0001	a0001c0001t0002g0006 a0001c0013t0001g0039 a0001c0001t0002g0006 a0001c0013t0001g0039	2	40	0.0500	13	c.419 others(34): Show c.419-177516_419-177515insGTTTTTTGTTTTT	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	2/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	78882086	C C	CAACAACA others(6): Show CAACAACAAAAAAA	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0040 a0001c0007t0001g0040	1	40	0.0250	13	c.418 others(34): Show c.418+125003_418+125004insTTTTTTTGTTGTT	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	2/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	78955769	C C	CTTTCTTT others(6): Show CTTTCTTTCTTTCT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00140.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0020 a0001c0001t0002g0020	1	40	0.0250	13	c.418 others(32): Show c.418+51308_418+51320dupAGAAAGAAAGAAA	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	2/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	79171770	A A	ATATATAT others(6): Show ATATATATATATTT	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0040 a0001c0007t0001g0040	1	40	0.0250	13	c.302 others(34): Show c.302-164565_302-164564insAAATATATATATA	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	1/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	79299554	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG03486.hp1 NA18522.hp2 others(1): Show HG02451.hp2 HG03486.hp1 NA18522.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0005t0001 a0001c0001t0001 a0001c0001t0002 a0001c0005t0001	a0001c0001t0001g0007 a0001c0001t0002g0006 a0001c0001t0002g0013 others(1): Show a0001c0001t0001g0007 a0001c0001t0002g0006 a0001c0001t0002g0013 a0001c0005t0001g0005	4	40	0.1000	13	c.301 others(34): Show c.301+153453_301+153465dupTTTTTTTTTTTTT	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	1/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	79416725	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG03225.hp1 HG03579.hp1 others(1): Show HG00639.hp1 HG03225.hp1 HG03579.hp1 NA18906.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0004 others(1): Show a0001c0002 a0001c0003 a0001c0004 a0001c0015	a0001c0002t0001 a0001c0003t0002 a0001c0004t0001 others(1): Show a0001c0002t0001 a0001c0003t0002 a0001c0004t0001 a0001c0015t0001	a0001c0002t0001g0025 a0001c0003t0002g0004 a0001c0004t0001g0031 others(1): Show a0001c0002t0001g0025 a0001c0003t0002g0004 a0001c0004t0001g0031 a0001c0015t0001g0027	4	40	0.1000	13	c.301 others(32): Show c.301+36294_301+36295insAAAAAAAAAAAAA	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	1/21			chr7	TogoVar
MAGI3_chr1_113385515_113690923	113395087	G G	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG01255.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0133 a0001c0001t0007g0133	1	236	0.0042	13	c.316 others(30): Show c.316+3755_316+3767dupTTTTTTTTTTTTT	MAGI3	ENSG00000081026.19	transcript	ENST00000307546.14	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr1	TogoVar
MAGI3_chr1_113385515_113690923	113416296	A A	AATTAATG others(6): Show AATTAATGACACAT	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG01255.hp2 HG01496.hp1 HG00621.hp2 HG01255.hp2 HG01496.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0129 a0001c0001t0007g0131 a0001c0001t0007g0133 a0001c0001t0007g0129 a0001c0001t0007g0131 a0001c0001t0007g0133	3	236	0.0127	13	c.316 others(32): Show c.316+24953_316+24954insGACACATATTAAT	MAGI3	ENSG00000081026.19	transcript	ENST00000307546.14	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr1	TogoVar
MAGI3_chr1_113385515_113690923	113416296	A A	AATTAATT others(6): Show AATTAATTACACAT	intron_variant intron_variant	MODIFIER	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0132 a0001c0002t0006g0132	1	236	0.0042	13	c.316 others(32): Show c.316+24955_316+24956insCACATATTAATTA	MAGI3	ENSG00000081026.19	transcript	ENST00000307546.14	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr1	TogoVar
MAGI3_chr1_113385515_113690923	113416299	T T	TAATCACA others(6): Show TAATCACACATATC	intron_variant intron_variant	MODIFIER	HG02083.hp2 HG02083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0079 a0001c0001t0003g0079	1	236	0.0042	13	c.316 others(32): Show c.316+24953_316+24954insCACACATATCAAT	MAGI3	ENSG00000081026.19	transcript	ENST00000307546.14	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr1	TogoVar
MAGI3_chr1_113385515_113690923	113416299	T T	TAATTACA others(6): Show TAATTACACATATC	intron_variant intron_variant	MODIFIER	NA18747.hp2 NA18747.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0083 a0001c0001t0005g0083	1	236	0.0042	13	c.316 others(32): Show c.316+24955_316+24956insCACATATCAATTA	MAGI3	ENSG00000081026.19	transcript	ENST00000307546.14	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr1	TogoVar
MAGI3_chr1_113385515_113690923	113416331	T T	TAATTAAT others(6): Show TAATTAATTATGTA	intron_variant intron_variant	MODIFIER	HG03834.hp2 HG03834.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0046 a0001c0001t0004g0046	1	236	0.0042	13	c.316 others(32): Show c.316+24983_316+24984insATTAATTATGTAA	MAGI3	ENSG00000081026.19	transcript	ENST00000307546.14	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr1	TogoVar
MAGI3_chr1_113385515_113690923	113416443	A A	ATATTAAT others(6): Show ATATTAATATATAT	intron_variant intron_variant	MODIFIER	NA19077.hp2 NA19077.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0071 a0001c0001t0003g0071	1	236	0.0042	13	c.316 others(32): Show c.316+25095_316+25096insATTAATATATATT	MAGI3	ENSG00000081026.19	transcript	ENST00000307546.14	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr1	TogoVar
MAGI3_chr1_113385515_113690923	113654518	A A	AAGAGGCA others(6): Show AAGAGGCATACCTT	intron_variant intron_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0108 a0001c0001t0003g0108	1	236	0.0042	13	c.262 others(30): Show c.2629+501_2629+513dupAGAGGCATACCTT	MAGI3	ENSG00000081026.19	transcript	ENST00000307546.14	protein_coding	15/20		INFO_REALIGN_3_PRIME	chr1	TogoVar
MAGIX_chrX_49157758_49173774	49169081	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02896.hp1 HG02976.hp1 HG06807.hp1 HG02896.hp1 HG02976.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0012 a0001c0001t0004 a0001c0001t0012	a0001c0001t0004g0003 a0001c0001t0012g0003 a0001c0001t0004g0003 a0001c0001t0012g0003	3	260	0.0115	13	c.26 others(24): Show c.2682_*2683insAAAAAAAAAAAAA	MAGIX	ENSG00000269313.6	transcript	ENST00000595224.6	protein_coding		308		chrX	TogoVar
MAGOH_chr1_53221900_53243518	53237673	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0109 a0001c0001t0001g0109	1	438	0.0023	13	c.88+ others(26): Show c.88+675_88+687dupTTTTTTTTTTTTT	MAGOH	ENSG00000162385.11	transcript	ENST00000371470.8	protein_coding	1/4			chr1	TogoVar
MAGT1_chrX_77820747_77900435	77876165	T T	TATATATA others(6): Show TATATATATATATA	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0139 a0001c0002t0001g0139	1	260	0.0039	13	c.103 others(28): Show c.103-569_103-568insTATATATATATAT	MAGT1	ENSG00000102158.22	transcript	ENST00000618282.5	protein_coding	1/9			chrX	TogoVar
MAJIN_chr11_64933230_64977108	64948639	A A	ATATATAT others(6): Show ATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03669.hp1 HG03669.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0034 a0001c0001t0001g0034	1	384	0.0026	13	c.350 others(28): Show c.350-821_350-820insATATATATATATA	MAJIN	ENSG00000168070.12	transcript	ENST00000301896.6	protein_coding	6/10			chr11	TogoVar

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