Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ATAD3C_chr1_1444689_1475163	1457595	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03486.hp2 NA20300.hp1 HG03486.hp2 NA20300.hp1	a0004 a0004	a0004c0012 a0004c0012	a0004c0012t0027 a0004c0012t0027	a0004c0012t0027g0035 a0004c0012t0027g0035	2	410	0.0049	13	c.741 others(28): Show c.741+422_741+434dupAAAAAAAAAAAAA	ATAD3C	ENSG00000215915.10	transcript	ENST00000378785.7	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATAD3C_chr1_1444689_1475163	1469099	T T	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00323.hp2 HG01109.hp2 HG01168.hp2 others(1): Show HG00323.hp2 HG01109.hp2 HG01168.hp2 HG01256.hp1	a0002 a0016 a0002 a0016	a0002c0002 a0016c0047 a0002c0002 a0016c0047	a0002c0002t0171 a0002c0002t0172 a0002c0002t0176 others(1): Show a0002c0002t0171 a0002c0002t0172 a0002c0002t0176 a0016c0047t0185	a0002c0002t0171g0218 a0002c0002t0172g0214 a0002c0002t0176g0232 others(1): Show a0002c0002t0171g0218 a0002c0002t0172g0214 a0002c0002t0176g0232 a0016c0047t0185g0150	4	410	0.0098	13	c.59 others(22): Show c.594_*606dupAAAAAAAAAAAAA	ATAD3C	ENSG00000215915.10	transcript	ENST00000378785.7	protein_coding	12/12	607	INFO_REALIGN_3_PRIME	chr1	TogoVar
ATAD5_chr17_30826966_30900869	30827140	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0004 a0003c0003t0004	a0003c0003t0004g0111 a0003c0003t0004g0111	1	286	0.0035	13	c.-52 others(24): Show c.-5208_-5207insAAAAAAAAAAAAA	ATAD5	ENSG00000176208.9	transcript	ENST00000321990.5	protein_coding		4825		chr17	TogoVar
ATAD5_chr17_30826966_30900869	30850869	A A	ATATATAT others(6): Show ATATATATATATTT	intron_variant intron_variant	MODIFIER	NA18939.hp1 NA18939.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0227 a0001c0001t0003g0227	1	286	0.0035	13	c.245 others(32): Show c.2451-4273_2451-4272insATATATATATTTT	ATAD5	ENSG00000176208.9	transcript	ENST00000321990.5	protein_coding	6/22		INFO_REALIGN_3_PRIME	chr17	TogoVar
ATAD5_chr17_30826966_30900869	30850870	T T	TATATATA others(6): Show TATATATATATATA	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0255 a0001c0001t0007g0255	1	286	0.0035	13	c.245 others(32): Show c.2451-4273_2451-4272insATATATATATATA	ATAD5	ENSG00000176208.9	transcript	ENST00000321990.5	protein_coding	6/22			chr17	TogoVar
ATE1_chr10_121735424_121933031	121770233	A A	ACACACAC others(6): Show ACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0003 a0001c0002t0003g0003	1	320	0.0031	13	c.137 others(34): Show c.1378+19935_1378+19936insGTGTGTGTGTGTG	ATE1	ENSG00000107669.19	transcript	ENST00000224652.12	protein_coding	11/11			chr10	TogoVar
ATF2_chr2_175067259_175173203	175110337	A A	AAAAATAA others(6): Show AAAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG02074.hp2 HG04199.hp2 NA18948.hp1 HG02074.hp2 HG04199.hp2 NA18948.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0197 a0001c0001t0005g0198 a0001c0001t0005g0199 a0001c0001t0005g0197 a0001c0001t0005g0198 a0001c0001t0005g0199	3	224	0.0134	13	c.828 others(30): Show c.828+1230_828+1231insATTTATTTATTTT	ATF2	ENSG00000115966.18	transcript	ENST00000264110.7	protein_coding	10/13			chr2	TogoVar
ATF2_chr2_175067259_175173203	175141018	A A	ATATATAT others(6): Show ATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0143 a0001c0001t0003g0143	1	224	0.0045	13	c.-43 others(30): Show c.-43-4533_-43-4532insATATATATATATA	ATF2	ENSG00000115966.18	transcript	ENST00000264110.7	protein_coding	2/13			chr2	TogoVar
ATF2_chr2_175067259_175173203	175163918	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00733.hp2 HG01433.hp2 others(6): Show HG00099.hp2 HG00733.hp2 HG01433.hp2 HG01952.hp1 HG02622.hp2 HG02965.hp1 HG03486.hp2 HG03579.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0011 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0011 a0001c0001t0013	a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0004g0015 others(6): Show a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0004g0015 a0001c0001t0004g0016 a0001c0001t0004g0017 a0001c0001t0004g0018 a0001c0001t0004g0201 a0001c0001t0011g0010 a0001c0001t0013g0014	9	224	0.0402	13	c.-14 others(32): Show c.-143+4119_-143+4131dupTTTTTTTTTTTTT	ATF2	ENSG00000115966.18	transcript	ENST00000264110.7	protein_coding	1/13			chr2	TogoVar
ATF4_chr22_39515562_39527683	39523993	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01496.hp1 HG01516.hp1 HG01516.hp2 others(6): Show HG01496.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG02818.hp2 HG02886.hp1 HG03225.hp2 HG04204.hp1 NA20905.hp2	a0002 a0004 a0007 a0002 a0004 a0007	a0002c0002 a0004c0005 a0007c0006 a0002c0002 a0004c0005 a0007c0006	a0002c0002t0002 a0004c0005t0001 a0007c0006t0001 a0002c0002t0002 a0004c0005t0001 a0007c0006t0001	a0002c0002t0002g0001 a0002c0002t0002g0008 a0004c0005t0001g0005 others(1): Show a0002c0002t0002g0001 a0002c0002t0002g0008 a0004c0005t0001g0005 a0007c0006t0001g0003	9	354	0.0254	13	c.13 others(24): Show c.1391_*1392insTTTTTTTTTTTTT	ATF4	ENSG00000128272.18	transcript	ENST00000674920.3	protein_coding		1311		chr22	TogoVar
ATF6_chr1_161761320_161969070	161773140	A A	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00642.hp1 HG00733.hp1 others(40): Show HG00140.hp2 HG00642.hp1 HG00733.hp1 HG01167.hp1 HG01243.hp2 HG01255.hp2 HG01258.hp2 HG01358.hp2 HG01361.hp2 HG01934.hp2 HG01993.hp2 HG02056.hp2 HG02071.hp2 HG02109.hp1 HG02148.hp2 HG02572.hp1 HG02615.hp2 HG02895.hp2 HG02897.hp1 HG02922.hp1 HG02976.hp2 HG03139.hp1 HG03195.hp1 HG03834.hp2 NA18939.hp2 NA18940.hp1 NA18941.hp2 NA18953.hp2 NA18954.hp2 NA18961.hp2 NA18962.hp2 NA18964.hp1 NA18969.hp1 NA18970.hp1 NA18972.hp2 NA18984.hp2 NA18988.hp1 NA18990.hp1 NA18992.hp2 NA18994.hp1 NA19009.hp2 NA19066.hp1 NA20300.hp1	a0002 a0004 a0002 a0004	a0002c0003 a0004c0005 a0004c0006 others(1): Show a0002c0003 a0004c0005 a0004c0006 a0004c0007	a0002c0003t0002 a0002c0003t0008 a0002c0003t0010 others(10): Show a0002c0003t0002 a0002c0003t0008 a0002c0003t0010 a0002c0003t0022 a0002c0003t0025 a0002c0003t0049 a0002c0003t0053 a0002c0003t0054 a0004c0005t0026 a0004c0005t0063 a0004c0006t0027 a0004c0006t0055 a0004c0007t0001	a0002c0003t0002g0271 a0002c0003t0002g0272 a0002c0003t0002g0273 others(39): Show a0002c0003t0002g0271 a0002c0003t0002g0272 a0002c0003t0002g0273 a0002c0003t0002g0277 a0002c0003t0002g0279 a0002c0003t0002g0281 a0002c0003t0002g0293 a0002c0003t0002g0295 a0002c0003t0002g0296 a0002c0003t0002g0297 a0002c0003t0002g0298 a0002c0003t0002g0299 a0002c0003t0002g0300 a0002c0003t0002g0301 a0002c0003t0002g0302 a0002c0003t0002g0304 a0002c0003t0002g0305 a0002c0003t0008g0282 a0002c0003t0008g0286 a0002c0003t0008g0287 a0002c0003t0008g0288 a0002c0003t0008g0289 a0002c0003t0008g0290 a0002c0003t0008g0292 a0002c0003t0008g0294 a0002c0003t0010g0270 a0002c0003t0010g0278 a0002c0003t0010g0284 a0002c0003t0010g0291 a0002c0003t0022g0269 a0002c0003t0022g0283 a0002c0003t0025g0276 a0002c0003t0049g0280 a0002c0003t0053g0303 a0002c0003t0054g0285 a0004c0005t0026g0317 a0004c0005t0026g0318 a0004c0005t0063g0316 a0004c0006t0027g0235 a0004c0006t0055g0236 a0004c0007t0001g0004 a0004c0007t0001g0315	43	332	0.1295	13	c.83- others(28): Show c.83-5103_83-5091dupTTTTTTTTTTTTT	ATF6	ENSG00000118217.7	transcript	ENST00000367942.4	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATF6_chr1_161761320_161969070	161829189	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02886.hp1 NA18992.hp2 HG02486.hp1 HG02886.hp1 NA18992.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0011 a0002c0003t0022 a0001c0001t0011 a0002c0003t0022	a0001c0001t0011g0323 a0001c0001t0011g0325 a0002c0003t0022g0269 a0001c0001t0011g0323 a0001c0001t0011g0325 a0002c0003t0022g0269	3	332	0.0090	13	c.118 others(32): Show c.1187+8041_1187+8053dupTTTTTTTTTTTTT	ATF6	ENSG00000118217.7	transcript	ENST00000367942.4	protein_coding	9/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATF6_chr1_161761320_161969070	161894521	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0063 a0004c0005t0063	a0004c0005t0063g0316 a0004c0005t0063g0316	1	332	0.0030	13	c.172 others(34): Show c.1720-17754_1720-17742dupTTTTTTTTTTTTT	ATF6	ENSG00000118217.7	transcript	ENST00000367942.4	protein_coding	14/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATF6_chr1_161761320_161969070	161920294	C C	CTCTTTTT others(6): Show CTCTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03831.hp2 HG03831.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0032 a0001c0002t0032	a0001c0002t0032g0012 a0001c0002t0032g0012	1	332	0.0030	13	c.180 others(32): Show c.1804+7915_1804+7916insCTTTTTTTTTTTT	ATF6	ENSG00000118217.7	transcript	ENST00000367942.4	protein_coding	15/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATF6_chr1_161761320_161969070	161920294	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01069.hp1 HG01081.hp1 others(27): Show HG00280.hp2 HG01069.hp1 HG01081.hp1 HG01081.hp2 HG01168.hp1 HG01169.hp1 HG01175.hp1 HG01261.hp2 HG01433.hp2 HG02300.hp2 HG02683.hp1 HG02698.hp2 HG02735.hp1 HG03041.hp1 HG03239.hp2 HG03453.hp2 HG03490.hp2 HG03834.hp1 HG04228.hp2 NA18747.hp1 NA18945.hp1 NA18961.hp1 NA18974.hp2 NA18986.hp1 NA19006.hp1 NA19055.hp2 NA19077.hp1 NA19082.hp2 NA20300.hp2 NA20805.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0003c0004 a0001c0001 a0001c0002 a0003c0004	a0001c0001t0004 a0001c0002t0001 a0001c0002t0003 others(7): Show a0001c0001t0004 a0001c0002t0001 a0001c0002t0003 a0001c0002t0009 a0001c0002t0017 a0001c0002t0035 a0001c0002t0039 a0001c0002t0042 a0001c0002t0046 a0003c0004t0007	a0001c0001t0004g0163 a0001c0001t0004g0167 a0001c0001t0004g0189 others(27): Show a0001c0001t0004g0163 a0001c0001t0004g0167 a0001c0001t0004g0189 a0001c0001t0004g0191 a0001c0001t0004g0196 a0001c0001t0004g0198 a0001c0001t0004g0201 a0001c0001t0004g0234 a0001c0002t0001g0013 a0001c0002t0001g0017 a0001c0002t0001g0019 a0001c0002t0001g0021 a0001c0002t0001g0024 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0107 a0001c0002t0001g0153 a0001c0002t0001g0155 a0001c0002t0001g0156 a0001c0002t0001g0157 a0001c0002t0001g0158 a0001c0002t0001g0160 a0001c0002t0003g0208 a0001c0002t0009g0035 a0001c0002t0017g0014 a0001c0002t0035g0018 a0001c0002t0039g0020 a0001c0002t0042g0023 a0001c0002t0046g0036 a0003c0004t0007g0165	30	332	0.0904	13	c.180 others(32): Show c.1804+7920_1804+7932dupTTTTTTTTTTTTT	ATF6	ENSG00000118217.7	transcript	ENST00000367942.4	protein_coding	15/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATF7IP2_chr16_10381061_10488638	10475722	G G	GAAAAAAA others(6): Show GAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0002 a0002	a0002c0008 a0002c0008	a0002c0008t0010 a0002c0008t0010	a0002c0008t0010g0033 a0002c0008t0010g0033	1	376	0.0027	13	c.154 others(32): Show c.1549+1743_1549+1755dupAAAAAAAAAAAAA	ATF7IP2	ENSG00000166669.14	transcript	ENST00000562102.6	protein_coding	12/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
ATF7_chr12_53507054_53631382	53542107	G G	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01358.hp2 HG01515.hp1 others(2): Show HG01192.hp1 HG01358.hp2 HG01515.hp1 HG03486.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0251 a0001c0001t0001g0265 a0001c0001t0001g0266 others(2): Show a0001c0001t0001g0251 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0283 a0001c0001t0001g0288	5	330	0.0152	13	c.264 others(30): Show c.264+1210_264+1222dupAAAAAAAAAAAAA	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	4/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53587366	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00423.hp2 HG00621.hp2 others(34): Show HG00280.hp2 HG00423.hp2 HG00621.hp2 HG00738.hp1 HG00741.hp2 HG01175.hp1 HG01261.hp1 HG01358.hp2 HG01943.hp2 HG01993.hp2 HG02056.hp2 HG02129.hp2 HG02165.hp1 HG02602.hp1 HG02886.hp2 HG03130.hp1 HG03195.hp2 HG04228.hp1 NA18941.hp1 NA18946.hp2 NA18970.hp1 NA18971.hp1 NA18980.hp2 NA18989.hp2 NA18999.hp1 NA19000.hp2 NA19002.hp2 NA19005.hp2 NA19010.hp1 NA19010.hp2 NA19062.hp2 NA19070.hp1 NA19081.hp2 NA19087.hp1 NA19090.hp2 NA19240.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0013 a0001c0001t0017 a0001c0001t0020 a0001c0001t0022 a0001c0002t0003 a0001c0002t0005 a0001c0003t0030	a0001c0001t0001g0168 a0001c0001t0001g0179 a0001c0001t0001g0265 others(34): Show a0001c0001t0001g0168 a0001c0001t0001g0179 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0281 a0001c0001t0001g0304 a0001c0001t0001g0313 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0026 a0001c0001t0002g0115 a0001c0001t0002g0120 a0001c0001t0002g0128 a0001c0001t0002g0132 a0001c0001t0002g0133 a0001c0001t0002g0137 a0001c0001t0003g0028 a0001c0001t0003g0174 a0001c0001t0003g0176 a0001c0001t0003g0185 a0001c0001t0004g0160 a0001c0001t0004g0162 a0001c0001t0004g0163 a0001c0001t0004g0164 a0001c0001t0004g0187 a0001c0001t0004g0192 a0001c0001t0007g0113 a0001c0001t0007g0114 a0001c0001t0007g0130 a0001c0001t0007g0136 a0001c0001t0013g0020 a0001c0001t0017g0173 a0001c0001t0020g0316 a0001c0001t0022g0169 a0001c0002t0003g0189 a0001c0002t0005g0159 a0001c0003t0030g0330	37	330	0.1121	13	c.48+ others(30): Show c.48+13574_48+13586dupTTTTTTTTTTTTT	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	2/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53587843	A A	ATATATAT others(6): Show ATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG03491.hp1 HG00140.hp1 HG03491.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0264 a0001c0001t0001g0297 a0001c0001t0001g0264 a0001c0001t0001g0297	2	330	0.0061	13	c.48+ others(30): Show c.48+13109_48+13110insATATATATATATA	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	2/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53587843	A A	ATATATAT others(6): Show ATATATATATATTT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0313 a0001c0001t0001g0313	1	330	0.0030	13	c.48+ others(30): Show c.48+13109_48+13110insAAATATATATATA	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	2/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53587843	A A	ATATATAT others(6): Show ATATATATATTTTT	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01256.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0076 a0001c0001t0001g0076	1	330	0.0030	13	c.48+ others(30): Show c.48+13109_48+13110insAAAAATATATATA	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	2/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53587843	A A	ATATTTTT others(6): Show ATATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0101 a0001c0001t0001g0101	1	330	0.0030	13	c.48+ others(30): Show c.48+13109_48+13110insAAAAAAAAAAATA	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	2/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53587844	T T	TATATATA others(6): Show TATATATATATATA	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01361.hp2 HG01934.hp2 others(13): Show HG01192.hp1 HG01361.hp2 HG01934.hp2 HG02523.hp2 HG03239.hp2 HG03486.hp2 HG03704.hp2 NA18947.hp2 NA18956.hp2 NA18960.hp2 NA18969.hp2 NA18991.hp2 NA18999.hp2 NA19068.hp1 NA19087.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0023 a0001c0001t0001 a0001c0001t0023	a0001c0001t0001g0238 a0001c0001t0001g0242 a0001c0001t0001g0257 others(13): Show a0001c0001t0001g0238 a0001c0001t0001g0242 a0001c0001t0001g0257 a0001c0001t0001g0267 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0278 a0001c0001t0001g0283 a0001c0001t0001g0285 a0001c0001t0001g0288 a0001c0001t0001g0291 a0001c0001t0001g0303 a0001c0001t0001g0312 a0001c0001t0001g0314 a0001c0001t0023g0302	16	330	0.0485	13	c.48+ others(30): Show c.48+13108_48+13109insTATATATATATAT	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	2/11			chr12	TogoVar
ATG10_chr5_81967023_82261133	81993360	C C	CTTCTTTC others(6): Show CTTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01261.hp2 HG01515.hp2 others(2): Show HG00738.hp1 HG01261.hp2 HG01515.hp2 HG03491.hp1 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0004 a0002c0002t0006 a0001c0001t0001 a0002c0002t0004 a0002c0002t0006	a0001c0001t0001g0211 a0002c0002t0004g0075 a0002c0002t0004g0080 others(2): Show a0001c0001t0001g0211 a0002c0002t0004g0075 a0002c0002t0004g0080 a0002c0002t0004g0117 a0002c0002t0006g0090	5	226	0.0221	13	c.108 others(30): Show c.108+5688_108+5689insCTTTCTTTTCTTT	ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG10_chr5_81967023_82261133	82138840	T T	TCCCTCCC others(6): Show TCCCTCCCCCTCCC	intron_variant intron_variant	MODIFIER	HG04184.hp1 HG04184.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0089 a0002c0002t0002g0089	1	226	0.0044	13	c.217 others(32): Show c.217-25556_217-25544dupCTCCCCCTCCCCC	ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG10_chr5_81967023_82261133	82138844	T T	TCCCCCTC others(6): Show TCCCCCTCCCCCTC	intron_variant intron_variant	MODIFIER	HG01192.hp1 NA18940.hp2 HG01192.hp1 NA18940.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0006 a0002c0002t0002 a0002c0002t0006	a0002c0002t0002g0069 a0002c0002t0006g0116 a0002c0002t0002g0069 a0002c0002t0006g0116	2	226	0.0089	13	c.217 others(32): Show c.217-25550_217-25538dupCTCCCCCTCCCCC	ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG10_chr5_81967023_82261133	82161696	A A	ACACACAC others(6): Show ACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0190 a0003c0003t0001g0190	1	226	0.0044	13	c.217 others(30): Show c.217-2703_217-2702insCACACACACACAC	ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	3/7			chr5	TogoVar
ATG12_chr5_115823200_115846565	115845836	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0044 a0001c0001t0001g0044	1	402	0.0025	13	c.-42 others(24): Show c.-4297_-4285dupTTTTTTTTTTTTT	ATG12	ENSG00000145782.13	transcript	ENST00000509910.2	protein_coding		4272		chr5	TogoVar
ATG13_chr11_46612553_46679518	46619372	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02896.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0062 a0001c0001t0002g0062	1	218	0.0046	13	c.-70 others(30): Show c.-70+1499_-70+1511dupTTTTTTTTTTTTT	ATG13	ENSG00000175224.17	transcript	ENST00000683050.1	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr11	TogoVar
ATG14_chr14_55361391_55416830	55380876	T T	TATATATA others(6): Show TATATATATATATA	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0218 a0001c0001t0003g0218	1	366	0.0027	13	c.878 others(28): Show c.878-187_878-186insTATATATATATAT	ATG14	ENSG00000126775.9	transcript	ENST00000247178.6	protein_coding	6/9			chr14	TogoVar
ATG14_chr14_55361391_55416830	55402922	A A	ATATATAT others(6): Show ATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0105 a0001c0001t0007g0105	1	366	0.0027	13	c.222 others(30): Show c.222-5489_222-5488insATATATATATATA	ATG14	ENSG00000126775.9	transcript	ENST00000247178.6	protein_coding	1/9			chr14	TogoVar
ATG14_chr14_55361391_55416830	55402924	A A	ATATATAT others(6): Show ATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0066 a0001c0002t0002g0066	1	366	0.0027	13	c.222 others(30): Show c.222-5491_222-5490insATATATATATATA	ATG14	ENSG00000126775.9	transcript	ENST00000247178.6	protein_coding	1/9			chr14	TogoVar
ATG14_chr14_55361391_55416830	55402926	A A	ATATATAT others(6): Show ATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0181 a0001c0001t0006g0181	1	366	0.0027	13	c.222 others(30): Show c.222-5493_222-5492insATATATATATATA	ATG14	ENSG00000126775.9	transcript	ENST00000247178.6	protein_coding	1/9			chr14	TogoVar
ATG16L1_chr2_233246673_233300669	233286621	C C	CATTTTTT others(6): Show CATTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG03239.hp1 HG03490.hp2 others(9): Show HG00733.hp2 HG03239.hp1 HG03490.hp2 HG03704.hp2 NA18944.hp1 NA18946.hp1 NA18959.hp1 NA18966.hp2 NA18968.hp1 NA18977.hp1 NA19056.hp1 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0061 a0001c0001t0004g0089 a0001c0001t0004g0104 others(9): Show a0001c0001t0004g0061 a0001c0001t0004g0089 a0001c0001t0004g0104 a0001c0001t0004g0107 a0001c0001t0004g0117 a0001c0001t0004g0118 a0001c0001t0004g0138 a0001c0001t0004g0146 a0001c0001t0004g0154 a0001c0001t0004g0172 a0001c0001t0004g0173 a0001c0001t0004g0192	12	354	0.0339	13	c.120 others(32): Show c.1204-3233_1204-3232insATTTTTTTTTTTT	ATG16L1	ENSG00000085978.22	transcript	ENST00000392017.9	protein_coding	12/17			chr2	TogoVar
ATG2A_chr11_64889546_64922209	64904816	T T	TTATTTTA others(6): Show TTATTTTATCTATC	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG01255.hp2 HG01433.hp1 others(17): Show HG00609.hp1 HG01255.hp2 HG01433.hp1 HG01952.hp2 HG02071.hp1 HG02083.hp2 HG02165.hp1 HG02602.hp2 HG02630.hp1 HG02698.hp2 HG02895.hp1 HG02896.hp1 HG03130.hp1 HG03209.hp2 NA18522.hp2 NA18956.hp1 NA18975.hp1 NA19057.hp1 NA19066.hp1 NA20905.hp2	a0001 a0003 a0004 others(3): Show a0001 a0003 a0004 a0005 a0020 a0027	a0001c0001 a0001c0002 a0001c0021 others(6): Show a0001c0001 a0001c0002 a0001c0021 a0001c0023 a0003c0003 a0004c0005 a0005c0008 a0020c0033 a0027c0043	a0001c0001t0001 a0001c0002t0001 a0001c0021t0001 others(6): Show a0001c0001t0001 a0001c0002t0001 a0001c0021t0001 a0001c0023t0001 a0003c0003t0001 a0004c0005t0001 a0005c0008t0001 a0020c0033t0007 a0027c0043t0001	a0001c0001t0001g0040 a0001c0001t0001g0202 a0001c0001t0001g0203 others(15): Show a0001c0001t0001g0040 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0215 a0001c0002t0001g0096 a0001c0002t0001g0123 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0144 a0001c0021t0001g0126 a0001c0023t0001g0137 a0003c0003t0001g0080 a0004c0005t0001g0039 a0004c0005t0001g0179 a0005c0008t0001g0108 a0020c0033t0007g0075 a0027c0043t0001g0168	20	372	0.0538	13	c.346 others(30): Show c.3464+746_3464+747insGATAGATAAAATA	ATG2A	ENSG00000110046.14	transcript	ENST00000377264.8	protein_coding	24/40			chr11	TogoVar
ATG2B_chr14_96274195_96368341	96308283	T T	TGTATATA others(6): Show TGTATATATATATA	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0005 a0002c0001t0005	a0002c0001t0005g0180 a0002c0001t0005g0180	1	356	0.0028	13	c.430 others(32): Show c.4303+1169_4303+1170insTATATATATATAC	ATG2B	ENSG00000066739.12	transcript	ENST00000359933.6	protein_coding	29/41			chr14	TogoVar
ATG3_chr3_112527510_112566962	112529622	T T	TATATCAG others(6): Show TATATCAGGGGGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18943.hp2 NA18943.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	376	0.0027	13	c.30 others(24): Show c.3076_*3077insCTCCCCCTGATAT	ATG3	ENSG00000144848.11	transcript	ENST00000283290.10	protein_coding		2887		chr3	TogoVar
ATG3_chr3_112527510_112566962	112544658	G G	GAAAAAAA others(6): Show GAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00280.hp2 others(195): Show HG00099.hp1 HG00099.hp2 HG00280.hp2 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp2 HG01069.hp1 HG01070.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01167.hp1 HG01192.hp2 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01361.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01884.hp2 HG01891.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02109.hp2 HG02129.hp2 HG02132.hp2 HG02145.hp1 HG02148.hp2 HG02165.hp1 HG02293.hp1 HG02486.hp1 HG02572.hp1 HG02602.hp2 HG02647.hp2 HG02717.hp2 HG02723.hp1 HG02738.hp1 HG02809.hp1 HG02886.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03130.hp2 HG03139.hp2 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp2 HG03491.hp1 HG03492.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18943.hp2 NA18944.hp1 NA18945.hp2 NA18947.hp2 NA18948.hp1 NA18950.hp1 NA18950.hp2 NA18953.hp2 NA18954.hp1 NA18955.hp1 NA18955.hp2 NA18957.hp1 NA18959.hp2 NA18962.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18979.hp1 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp1 NA18984.hp1 NA18985.hp1 NA18987.hp1 NA18989.hp2 NA18994.hp2 NA18995.hp2 NA18998.hp1 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp2 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19076.hp2 NA19078.hp1 NA19079.hp1 NA19079.hp2 NA19082.hp2 NA19086.hp1 NA19088.hp1 NA19088.hp2 NA19089.hp2 NA20129.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0002c0004t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(104): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0029 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0053 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0061 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0102 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0147 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0156 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0173 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0190 a0001c0001t0001g0192 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0002g0026 a0001c0001t0005g0196 a0001c0001t0006g0197 a0001c0001t0007g0207 a0002c0004t0001g0182	198	376	0.5266	13	c.344 others(28): Show c.344-553_344-552insTTTTTTTTTTTTT	ATG3	ENSG00000144848.11	transcript	ENST00000283290.10	protein_coding	5/11			chr3	TogoVar
ATG4B_chr2_241632693_241678857	241642871	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18941.hp2 NA18941.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0076 a0001c0002t0005g0076	1	410	0.0024	13	c.10+ others(28): Show c.10+5147_10+5148insTTTTTTTTTTTTT	ATG4B	ENSG00000168397.17	transcript	ENST00000404914.8	protein_coding	1/12			chr2	TogoVar
ATG4D_chr19_10538904_10558418	10548003	A A	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG03492.hp2 HG06807.hp2 others(3): Show HG01433.hp2 HG03492.hp2 HG06807.hp2 NA18944.hp1 NA19011.hp1 NA19064.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0038 a0001c0001t0001g0082 a0001c0001t0001g0092 others(2): Show a0001c0001t0001g0038 a0001c0001t0001g0082 a0001c0001t0001g0092 a0001c0001t0001g0128 a0001c0001t0001g0149	6	406	0.0148	13	c.835 others(28): Show c.835+783_835+795dupTTTTTTTTTTTTT	ATG4D	ENSG00000130734.10	transcript	ENST00000309469.9	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr19	TogoVar
ATG5_chr6_106179476_106330760	106294845	G G	GAAAAAAA others(6): Show GAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG03540.hp2 NA19030.hp2 HG02145.hp1 HG03540.hp2 NA19030.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0003 a0003c0005 a0001c0001 a0001c0003 a0003c0005	a0001c0001t0001 a0001c0003t0002 a0003c0005t0008 a0001c0001t0001 a0001c0003t0002 a0003c0005t0008	a0001c0001t0001g0106 a0001c0003t0002g0014 a0003c0005t0008g0068 a0001c0001t0001g0106 a0001c0003t0002g0014 a0003c0005t0008g0068	3	358	0.0084	13	c.237 others(30): Show c.237-1752_237-1740dupTTTTTTTTTTTTT	ATG5	ENSG00000057663.16	transcript	ENST00000369076.8	protein_coding	3/7			chr6	TogoVar
ATG7_chr3_11267397_11562665	11268006	T T	TCTCTCTC others(6): Show TCTCTCTCCACACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01099.hp1 HG01099.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0126 a0001c0001t0001g0126	1	292	0.0034	13	c.-47 others(24): Show c.-4790_-4789insCTCTCTCCACACA	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding		4390		chr3	TogoVar
ATG7_chr3_11267397_11562665	11271223	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02055.hp2 HG02615.hp1 HG03486.hp1 HG02055.hp2 HG02615.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0044 a0001c0001t0002 a0001c0001t0003 a0001c0001t0044	a0001c0001t0002g0189 a0001c0001t0003g0256 a0001c0001t0044g0262 a0001c0001t0002g0189 a0001c0001t0003g0256 a0001c0001t0044g0262	3	292	0.0103	13	c.-15 others(24): Show c.-1573_-1572insTTTTTTTTTTTTT	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding		1173		chr3	TogoVar
ATG7_chr3_11267397_11562665	11378027	A A	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02886.hp1 HG03486.hp1 HG02280.hp2 HG02886.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0045 a0001c0001t0002 a0001c0001t0045	a0001c0001t0002g0189 a0001c0001t0002g0241 a0001c0001t0045g0274 a0001c0001t0002g0189 a0001c0001t0002g0241 a0001c0001t0045g0274	3	292	0.0103	13	c.187 others(32): Show c.1876-1939_1876-1927dupTTTTTTTTTTTTT	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	18/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11397365	G G	GGTTTTAA others(6): Show GGTTTTAATTCACC	intron_variant intron_variant	MODIFIER	NA18974.hp1 NA18974.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0068 a0001c0001t0003g0068	1	292	0.0034	13	c.195 others(34): Show c.1956+17314_1956+17326dupGTTTTAATTCACC	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	19/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11411619	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02897.hp1 HG02896.hp1 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0027 a0001c0001t0001g0088 a0001c0001t0001g0027 a0001c0001t0001g0088	2	292	0.0069	13	c.195 others(34): Show c.1957-15168_1957-15156dupAAAAAAAAAAAAA	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	19/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11422769	T T	TTTTTTTT others(6): Show TTTTTTTTTTTTTG	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0206 a0001c0001t0002g0206	1	292	0.0034	13	c.195 others(32): Show c.1957-4035_1957-4034insTTTTTTTTTTTTG	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	19/20			chr3	TogoVar
ATG7_chr3_11267397_11562665	11442739	C C	CCAAAAAA others(6): Show CCAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02056.hp1 HG02683.hp2 others(1): Show HG00639.hp1 HG02056.hp1 HG02683.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0043 a0001c0002t0029 a0001c0001t0001 a0001c0001t0043 a0001c0002t0029	a0001c0001t0001g0091 a0001c0001t0001g0134 a0001c0001t0043g0054 others(1): Show a0001c0001t0001g0091 a0001c0001t0001g0134 a0001c0001t0043g0054 a0001c0002t0029g0043	4	292	0.0137	13	c.207 others(34): Show c.2079+15813_2079+15814insCAAAAAAAAAAAA	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20			chr3	TogoVar
ATG7_chr3_11267397_11562665	11446871	T T	TCGTGTTG others(6): Show TCGTGTTGTCCATC	intron_variant intron_variant	MODIFIER	NA19002.hp1 NA19002.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0135 a0001c0001t0003g0135	1	292	0.0034	13	c.207 others(34): Show c.2079+19946_2079+19958dupCGTGTTGTCCATC	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11469988	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02280.hp1 NA18522.hp2 HG02257.hp1 HG02280.hp1 NA18522.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0007 a0001c0002t0013 a0001c0002t0007 a0001c0002t0013	a0001c0002t0007g0173 a0001c0002t0007g0177 a0001c0002t0013g0133 a0001c0002t0007g0173 a0001c0002t0007g0177 a0001c0002t0013g0133	3	292	0.0103	13	c.207 others(34): Show c.2079+43071_2079+43083dupAAAAAAAAAAAAA	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar

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