Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CIT_chr12_119680791_119882320	119745374	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00408.hp2 HG00733.hp2 others(33): Show HG00280.hp2 HG00408.hp2 HG00733.hp2 HG00735.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG02080.hp1 HG02109.hp1 HG02165.hp2 HG02293.hp1 HG03017.hp1 HG03017.hp2 HG03225.hp2 HG03239.hp1 HG03492.hp1 HG03710.hp1 HG04199.hp1 NA18747.hp1 NA18906.hp1 NA18939.hp1 NA18969.hp2 NA18981.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp2 NA18993.hp1 NA18993.hp2 NA19006.hp1 NA19006.hp2 NA19010.hp1 NA19012.hp1 NA19043.hp2 NA19089.hp1 NA19240.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0023 a0001c0001 a0001c0003 a0001c0023	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0015 a0001c0003t0003 a0001c0023t0004	a0001c0001t0001g0034 a0001c0001t0001g0047 a0001c0001t0001g0108 others(33): Show a0001c0001t0001g0034 a0001c0001t0001g0047 a0001c0001t0001g0108 a0001c0001t0001g0122 a0001c0001t0001g0126 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0138 a0001c0001t0001g0140 a0001c0001t0001g0143 a0001c0001t0001g0145 a0001c0001t0001g0158 a0001c0001t0001g0172 a0001c0001t0001g0174 a0001c0001t0001g0179 a0001c0001t0001g0199 a0001c0001t0001g0201 a0001c0001t0002g0110 a0001c0001t0002g0188 a0001c0001t0004g0146 a0001c0001t0004g0151 a0001c0001t0004g0157 a0001c0001t0004g0164 a0001c0001t0004g0166 a0001c0001t0004g0168 a0001c0001t0004g0169 a0001c0001t0004g0170 a0001c0001t0004g0194 a0001c0001t0006g0011 a0001c0001t0006g0119 a0001c0001t0015g0094 a0001c0003t0003g0026 a0001c0003t0003g0080 a0001c0003t0003g0086 a0001c0003t0003g0213 a0001c0023t0004g0059	36	236	0.1525	13	c.290 others(32): Show c.2905-2923_2905-2911dupTTTTTTTTTTTTT	CIT	ENSG00000122966.18	transcript	ENST00000392521.7	protein_coding	23/47			chr12	TogoVar
CIT_chr12_119680791_119882320	119745386	A A	AAAAAAAA others(6): Show AAAAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	NA18959.hp1 NA18959.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0141 a0001c0001t0002g0141	1	236	0.0042	13	c.290 others(32): Show c.2905-2935_2905-2923dupGTTTTTTTTTTTT	CIT	ENSG00000122966.18	transcript	ENST00000392521.7	protein_coding	23/47			chr12	TogoVar
CIT_chr12_119680791_119882320	119745390	A A	AAAAAAAA others(6): Show AAAAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	NA18960.hp2 NA18960.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0120 a0001c0001t0002g0120	1	236	0.0042	13	c.290 others(32): Show c.2905-2927_2905-2926insGTTTTTTTTTTTT	CIT	ENSG00000122966.18	transcript	ENST00000392521.7	protein_coding	23/47			chr12	TogoVar
CIT_chr12_119680791_119882320	119825672	C C	CTAATACA others(6): Show CTAATACAAGTTAT	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0184 a0001c0003t0003g0184	1	236	0.0042	13	c.754 others(28): Show c.754-317_754-305dupATAACTTGTATTA	CIT	ENSG00000122966.18	transcript	ENST00000392521.7	protein_coding	7/47			chr12	TogoVar
CIT_chr12_119680791_119882320	119862808	T T	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02896.hp2 HG00735.hp2 HG02896.hp2	a0001 a0001	a0001c0003 a0001c0005 a0001c0003 a0001c0005	a0001c0003t0003 a0001c0005t0008 a0001c0003t0003 a0001c0005t0008	a0001c0003t0003g0086 a0001c0005t0008g0085 a0001c0003t0003g0086 a0001c0005t0008g0085	2	236	0.0085	13	c.239 others(30): Show c.239-5123_239-5111dupTTTTTTTTTTTTT	CIT	ENSG00000122966.18	transcript	ENST00000392521.7	protein_coding	3/47			chr12	TogoVar
CIT_chr12_119680791_119882320	119862808	T T	TTAAAAAA others(6): Show TTAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19002.hp1 NA19002.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0092 a0001c0002t0002g0092	1	236	0.0042	13	c.239 others(30): Show c.239-5111_239-5110insTTTTTTTTTTTTA	CIT	ENSG00000122966.18	transcript	ENST00000392521.7	protein_coding	3/47			chr12	TogoVar
CIZ1_chr9_128161065_128196572	128161087	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG00323.hp1 HG00408.hp1 others(110): Show HG00280.hp1 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00609.hp2 HG00673.hp1 HG01109.hp2 HG01346.hp2 HG01433.hp1 HG01928.hp1 HG01928.hp2 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02055.hp1 HG02074.hp1 HG02074.hp2 HG02080.hp2 HG02129.hp1 HG02135.hp1 HG02145.hp1 HG02165.hp1 HG02293.hp1 HG02300.hp2 HG02486.hp2 HG02615.hp1 HG02622.hp2 HG02647.hp2 HG02886.hp2 HG03130.hp2 HG03486.hp1 HG03490.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp2 HG03654.hp2 HG03688.hp2 HG03704.hp2 HG04115.hp1 HG04204.hp1 HG04228.hp1 NA18612.hp2 NA18747.hp2 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18953.hp2 NA18954.hp2 NA18959.hp2 NA18961.hp1 NA18962.hp2 NA18963.hp2 NA18968.hp2 NA18969.hp2 NA18970.hp2 NA18971.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp2 NA18978.hp2 NA18981.hp1 NA18984.hp2 NA18985.hp2 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp2 NA18993.hp1 NA18995.hp2 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19001.hp1 NA19004.hp1 NA19007.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp2 NA19012.hp1 NA19054.hp1 NA19057.hp1 NA19058.hp2 NA19062.hp2 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp2 NA19068.hp1 NA19070.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp2 NA19091.hp1 NA19091.hp2 NA20300.hp1 NA20905.hp2 NA21309.hp2	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0004 a0005 a0007 a0009 a0011 a0012	a0001c0001 a0001c0003 a0001c0004 others(9): Show a0001c0001 a0001c0003 a0001c0004 a0002c0002 a0003c0005 a0004c0006 a0004c0019 a0005c0008 a0007c0013 a0009c0021 a0011c0015 a0012c0018	a0001c0001t0001 a0001c0003t0001 a0001c0004t0001 others(9): Show a0001c0001t0001 a0001c0003t0001 a0001c0004t0001 a0002c0002t0001 a0003c0005t0001 a0004c0006t0001 a0004c0019t0001 a0005c0008t0001 a0007c0013t0001 a0009c0021t0001 a0011c0015t0001 a0012c0018t0001	a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0015 others(94): Show a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0028 a0001c0001t0001g0038 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0074 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0084 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0121 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0140 a0001c0001t0001g0145 a0001c0001t0001g0154 a0001c0001t0001g0157 a0001c0001t0001g0169 a0001c0001t0001g0180 a0001c0001t0001g0185 a0001c0001t0001g0195 a0001c0001t0001g0198 a0001c0001t0001g0210 a0001c0001t0001g0277 a0001c0001t0001g0285 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0297 a0001c0001t0001g0298 a0001c0001t0001g0310 a0001c0003t0001g0008 a0001c0004t0001g0014 a0001c0004t0001g0051 a0001c0004t0001g0055 a0001c0004t0001g0056 a0001c0004t0001g0076 a0001c0004t0001g0086 a0002c0002t0001g0269 a0003c0005t0001g0301 a0004c0006t0001g0135 a0004c0019t0001g0085 a0005c0008t0001g0024 a0007c0013t0001g0073 a0007c0013t0001g0083 a0009c0021t0001g0072 a0011c0015t0001g0211 a0012c0018t0001g0071	113	380	0.2974	13	c.51 others(24): Show c.5109_*5110insTTTTTTTTTTTTT	CIZ1	ENSG00000148337.22	transcript	ENST00000372938.10	protein_coding		4977		chr9	TogoVar
CIZ1_chr9_128161065_128196572	128180624	C C	CCCTGCCT others(6): Show CCCTGCCTCCCACA	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02559.hp1 HG02615.hp2 others(7): Show HG02109.hp1 HG02559.hp1 HG02615.hp2 HG02622.hp1 HG02647.hp1 HG02717.hp1 HG02965.hp2 HG02976.hp2 NA19043.hp2 NA20129.hp2	a0001 a0001	a0001c0007 a0001c0009 a0001c0011 a0001c0007 a0001c0009 a0001c0011	a0001c0007t0001 a0001c0009t0001 a0001c0011t0001 a0001c0007t0001 a0001c0009t0001 a0001c0011t0001	a0001c0007t0001g0078 a0001c0007t0001g0079 a0001c0007t0001g0111 others(6): Show a0001c0007t0001g0078 a0001c0007t0001g0079 a0001c0007t0001g0111 a0001c0007t0001g0119 a0001c0007t0001g0120 a0001c0007t0001g0292 a0001c0009t0001g0030 a0001c0011t0001g0040 a0001c0011t0001g0041	10	380	0.0263	13	c.682 others(26): Show c.682+84_682+96dupTGTGGGAGGCAGG	CIZ1	ENSG00000148337.22	transcript	ENST00000372938.10	protein_coding	6/16			chr9	TogoVar
CIZ1_chr9_128161065_128196572	128188049	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00544.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0223 a0001c0001t0001g0223	1	380	0.0026	13	c.287 others(28): Show c.287-128_287-116dupTTTTTTTTTTTTT	CIZ1	ENSG00000148337.22	transcript	ENST00000372938.10	protein_coding	3/16			chr9	TogoVar
CKAP2_chr13_52450478_52481627	52452963	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00621.hp1 HG01261.hp2 HG01891.hp2 others(10): Show HG00621.hp1 HG01261.hp2 HG01891.hp2 HG01943.hp2 HG01952.hp2 HG01978.hp1 HG02055.hp1 HG02922.hp1 HG02970.hp2 HG04115.hp2 HG06807.hp1 NA18940.hp2 NA19080.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0001c0013 a0006c0008 a0001c0001 a0001c0013 a0006c0008	a0001c0001t0001 a0001c0001t0005 a0001c0013t0008 others(1): Show a0001c0001t0001 a0001c0001t0005 a0001c0013t0008 a0006c0008t0001	a0001c0001t0001g0002 a0001c0001t0001g0007 a0001c0001t0001g0025 others(9): Show a0001c0001t0001g0002 a0001c0001t0001g0007 a0001c0001t0001g0025 a0001c0001t0001g0048 a0001c0001t0001g0056 a0001c0001t0001g0103 a0001c0001t0001g0125 a0001c0001t0001g0144 a0001c0001t0001g0160 a0001c0001t0005g0035 a0001c0013t0008g0155 a0006c0008t0001g0207	13	406	0.0320	13	c.-25 others(24): Show c.-2594_-2593insTTTTTTTTTTTTT	CKAP2	ENSG00000136108.15	transcript	ENST00000258607.10	protein_coding		2514		chr13	TogoVar
CKAP2_chr13_52450478_52481627	52477787	A A	ACTCCATT others(6): Show ACTCCATTGCTCCT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18978.hp1 NA18978.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0225 a0001c0001t0002g0225	1	406	0.0025	13	c.26 others(24): Show c.2646_*2647insCTCCATTGCTCCT	CKAP2	ENSG00000136108.15	transcript	ENST00000258607.10	protein_coding		1161		chr13	TogoVar
CKAP4_chr12_106232881_106253020	106237526	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01361.hp2 HG02486.hp2 HG03516.hp2 others(4): Show HG01361.hp2 HG02486.hp2 HG03516.hp2 HG03579.hp2 NA18943.hp1 NA18992.hp1 NA19043.hp2	a0002 a0004 a0002 a0004	a0002c0002 a0004c0005 a0002c0002 a0004c0005	a0002c0002t0002 a0002c0002t0003 a0004c0005t0001 others(2): Show a0002c0002t0002 a0002c0002t0003 a0004c0005t0001 a0004c0005t0003 a0004c0005t0010	a0002c0002t0002g0004 a0002c0002t0003g0003 a0004c0005t0001g0019 others(2): Show a0002c0002t0002g0004 a0002c0002t0003g0003 a0004c0005t0001g0019 a0004c0005t0003g0018 a0004c0005t0010g0032	7	418	0.0168	13	c.14 others(24): Show c.1497_*1498insTTTTTTTTTTTTT	CKAP4	ENSG00000136026.14	transcript	ENST00000378026.5	protein_coding		354		chr12	TogoVar
CKMT2_chr5_81228322_81271398	81250940	A A	ACACACAC others(6): Show ACACACACACACAC	intron_variant intron_variant	MODIFIER	HG04199.hp1 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0261 a0001c0001t0002g0261	1	356	0.0028	13	c.-20 others(28): Show c.-20-173_-20-172insCACACACACACAC	CKMT2	ENSG00000131730.16	transcript	ENST00000254035.9	protein_coding	1/9			chr5	TogoVar
CKM_chr19_45301413_45327875	45315849	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01169.hp2 HG01192.hp1 others(15): Show HG00280.hp2 HG01169.hp2 HG01192.hp1 HG01261.hp2 HG01891.hp2 HG02109.hp1 HG02257.hp1 HG02559.hp1 HG02615.hp1 HG02622.hp2 HG02647.hp1 HG03098.hp1 HG03471.hp1 HG03540.hp1 HG03579.hp1 NA19043.hp2 NA20129.hp2 NA20805.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0002c0011 a0001c0002 a0001c0003 a0002c0011	a0001c0002t0001 a0001c0002t0004 a0001c0003t0001 others(2): Show a0001c0002t0001 a0001c0002t0004 a0001c0003t0001 a0001c0003t0004 a0002c0011t0001	a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0146 others(15): Show a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0146 a0001c0002t0001g0147 a0001c0002t0001g0166 a0001c0002t0001g0213 a0001c0002t0001g0214 a0001c0002t0001g0289 a0001c0002t0001g0319 a0001c0002t0001g0329 a0001c0002t0001g0330 a0001c0002t0001g0331 a0001c0002t0004g0140 a0001c0003t0001g0126 a0001c0003t0001g0136 a0001c0003t0001g0290 a0001c0003t0004g0291 a0002c0011t0001g0148	18	392	0.0459	13	c.349 others(28): Show c.349-253_349-252insAAAAAAAAAAAAA	CKM	ENSG00000104879.5	transcript	ENST00000221476.4	protein_coding	3/7			chr19	TogoVar
CKM_chr19_45301413_45327875	45325626	C C	CCTCCCCC others(6): Show CCTCCCCCCCCCCT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18977.hp1 NA18977.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0220 a0001c0001t0001g0220	1	392	0.0026	13	c.-28 others(24): Show c.-2825_-2824insAGGGGGGGGGGAG	CKM	ENSG00000104879.5	transcript	ENST00000221476.4	protein_coding		2752		chr19	TogoVar
CLASP1_chr2_121332776_121654462	121442481	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp2 HG00558.hp1 others(26): Show HG00408.hp1 HG00423.hp2 HG00558.hp1 HG00673.hp2 HG00735.hp2 HG01074.hp1 HG01981.hp1 HG01993.hp1 HG02040.hp2 HG02293.hp2 HG02523.hp2 HG02735.hp2 HG02896.hp1 HG03209.hp1 NA18612.hp1 NA18947.hp1 NA18964.hp1 NA18966.hp1 NA18975.hp1 NA18984.hp2 NA18998.hp2 NA18999.hp2 NA19011.hp2 NA19054.hp1 NA19058.hp1 NA19062.hp2 NA19065.hp2 NA19083.hp2 NA19240.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0002 a0001c0001t0007 a0001c0001t0027 others(7): Show a0001c0001t0002 a0001c0001t0007 a0001c0001t0027 a0001c0001t0034 a0001c0001t0035 a0001c0001t0071 a0001c0001t0081 a0001c0001t0082 a0003c0005t0002 a0003c0005t0007	a0001c0001t0002g0101 a0001c0001t0002g0105 a0001c0001t0002g0106 others(26): Show a0001c0001t0002g0101 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0109 a0001c0001t0002g0110 a0001c0001t0002g0111 a0001c0001t0002g0112 a0001c0001t0002g0113 a0001c0001t0002g0115 a0001c0001t0002g0116 a0001c0001t0002g0117 a0001c0001t0002g0126 a0001c0001t0007g0119 a0001c0001t0007g0120 a0001c0001t0007g0121 a0001c0001t0007g0122 a0001c0001t0007g0123 a0001c0001t0007g0124 a0001c0001t0027g0098 a0001c0001t0027g0099 a0001c0001t0034g0118 a0001c0001t0035g0102 a0001c0001t0035g0128 a0001c0001t0071g0100 a0001c0001t0081g0104 a0001c0001t0082g0108 a0003c0005t0002g0114 a0003c0005t0007g0103	29	214	0.1355	13	c.191 others(32): Show c.1912+4843_1912+4855dupAAAAAAAAAAAAA	CLASP1	ENSG00000074054.21	transcript	ENST00000696935.1	protein_coding	19/40			chr2	TogoVar
CLASP1_chr2_121332776_121654462	121478665	C C	CCACACAC others(6): Show CCACACACACCACA	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0044 a0001c0001t0044	a0001c0001t0044g0005 a0001c0001t0044g0005	1	214	0.0047	13	c.713 others(30): Show c.713-8718_713-8706dupTGTGGTGTGTGTG	CLASP1	ENSG00000074054.21	transcript	ENST00000696935.1	protein_coding	8/40			chr2	TogoVar
CLASP1_chr2_121332776_121654462	121478855	C C	CACCACAC others(6): Show CACCACACCACACA	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp2 HG00558.hp1 others(25): Show HG00408.hp1 HG00423.hp2 HG00558.hp1 HG00673.hp2 HG00735.hp2 HG01074.hp1 HG01981.hp1 HG01993.hp1 HG02027.hp1 HG02040.hp2 HG02293.hp2 HG02523.hp2 HG02735.hp2 HG03239.hp1 NA18612.hp1 NA18947.hp1 NA18964.hp1 NA18966.hp1 NA18975.hp1 NA18984.hp2 NA18998.hp2 NA18999.hp2 NA19011.hp2 NA19054.hp1 NA19058.hp1 NA19062.hp2 NA19065.hp2 NA19083.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0002 a0001c0001t0007 a0001c0001t0034 others(5): Show a0001c0001t0002 a0001c0001t0007 a0001c0001t0034 a0001c0001t0035 a0001c0001t0081 a0001c0001t0082 a0003c0005t0002 a0003c0005t0007	a0001c0001t0002g0101 a0001c0001t0002g0105 a0001c0001t0002g0106 others(25): Show a0001c0001t0002g0101 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0109 a0001c0001t0002g0110 a0001c0001t0002g0111 a0001c0001t0002g0112 a0001c0001t0002g0113 a0001c0001t0002g0115 a0001c0001t0002g0116 a0001c0001t0002g0117 a0001c0001t0002g0126 a0001c0001t0002g0127 a0001c0001t0007g0119 a0001c0001t0007g0120 a0001c0001t0007g0121 a0001c0001t0007g0122 a0001c0001t0007g0123 a0001c0001t0007g0124 a0001c0001t0034g0118 a0001c0001t0034g0125 a0001c0001t0035g0102 a0001c0001t0035g0128 a0001c0001t0081g0104 a0001c0001t0082g0108 a0003c0005t0002g0114 a0003c0005t0007g0103	28	214	0.1308	13	c.713 others(30): Show c.713-8896_713-8895insTGTGTGGTGTGGT	CLASP1	ENSG00000074054.21	transcript	ENST00000696935.1	protein_coding	8/40			chr2	TogoVar
CLASP1_chr2_121332776_121654462	121478992	C C	CCACACAC others(6): Show CCACACACACACCA	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01884.hp1 HG01891.hp1 others(6): Show HG01433.hp1 HG01884.hp1 HG01891.hp1 HG01943.hp2 HG02486.hp1 HG02818.hp2 HG03098.hp1 HG06807.hp2 NA19043.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0001c0009 a0006c0007 a0001c0001 a0001c0009 a0006c0007	a0001c0001t0025 a0001c0001t0049 a0001c0001t0058 others(6): Show a0001c0001t0025 a0001c0001t0049 a0001c0001t0058 a0001c0001t0059 a0001c0001t0064 a0001c0001t0067 a0001c0001t0075 a0001c0009t0076 a0006c0007t0063	a0001c0001t0025g0008 a0001c0001t0049g0011 a0001c0001t0058g0010 others(6): Show a0001c0001t0025g0008 a0001c0001t0049g0011 a0001c0001t0058g0010 a0001c0001t0059g0009 a0001c0001t0064g0007 a0001c0001t0067g0018 a0001c0001t0075g0017 a0001c0009t0076g0012 a0006c0007t0063g0016	9	214	0.0421	13	c.713 others(30): Show c.713-9045_713-9033dupTGGTGTGTGTGTG	CLASP1	ENSG00000074054.21	transcript	ENST00000696935.1	protein_coding	8/40			chr2	TogoVar
CLASP1_chr2_121332776_121654462	121517858	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0017 a0001c0002t0017	a0001c0002t0017g0205 a0001c0002t0017g0205	1	214	0.0047	13	c.547 others(30): Show c.547-2109_547-2097dupAAAAAAAAAAAAA	CLASP1	ENSG00000074054.21	transcript	ENST00000696935.1	protein_coding	6/40			chr2	TogoVar
CLASP1_chr2_121332776_121654462	121581260	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG03486.hp2 HG02615.hp1 HG03486.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0011 a0001c0002t0019 a0001c0002t0011 a0001c0002t0019	a0001c0002t0011g0176 a0001c0002t0019g0174 a0001c0002t0011g0176 a0001c0002t0019g0174	2	214	0.0094	13	c.195 others(32): Show c.195+24428_195+24440dupAAAAAAAAAAAAA	CLASP1	ENSG00000074054.21	transcript	ENST00000696935.1	protein_coding	2/40			chr2	TogoVar
CLASP2_chr3_33491245_33723254	33506377	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02922.hp1 HG03098.hp1 others(1): Show HG02280.hp2 HG02922.hp1 HG03098.hp1 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0014 a0001c0001t0001 a0001c0001t0014	a0001c0001t0001g0151 a0001c0001t0001g0160 a0001c0001t0001g0170 others(1): Show a0001c0001t0001g0151 a0001c0001t0001g0160 a0001c0001t0001g0170 a0001c0001t0014g0158	4	278	0.0144	13	c.431 others(32): Show c.4317+4180_4317+4181insTTTTTTTTTTTTT	CLASP2	ENSG00000163539.19	transcript	ENST00000682230.1	protein_coding	37/38			chr3	TogoVar
CLASP2_chr3_33491245_33723254	33568553	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG01106.hp1 NA18964.hp2 others(2): Show HG01071.hp2 HG01106.hp1 NA18964.hp2 NA19066.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0232 a0001c0001t0002g0235 a0001c0001t0002g0240 others(2): Show a0001c0001t0002g0232 a0001c0001t0002g0235 a0001c0001t0002g0240 a0001c0001t0002g0246 a0001c0001t0002g0252	5	278	0.0180	13	c.276 others(32): Show c.2764-1832_2764-1820dupTTTTTTTTTTTTT	CLASP2	ENSG00000163539.19	transcript	ENST00000682230.1	protein_coding	26/38			chr3	TogoVar
CLASP2_chr3_33491245_33723254	33571015	A A	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02165.hp2 HG02717.hp1 NA18612.hp1 HG02165.hp2 HG02717.hp1 NA18612.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0009 a0001c0001 a0003c0009	a0001c0001t0002 a0003c0009t0003 a0001c0001t0002 a0003c0009t0003	a0001c0001t0002g0053 a0003c0009t0003g0047 a0003c0009t0003g0146 a0001c0001t0002g0053 a0003c0009t0003g0047 a0003c0009t0003g0146	3	278	0.0108	13	c.270 others(30): Show c.2700-238_2700-226dupAAAAAAAAAAAAA	CLASP2	ENSG00000163539.19	transcript	ENST00000682230.1	protein_coding	25/38			chr3	TogoVar
CLASP2_chr3_33491245_33723254	33667406	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG01175.hp2 HG02040.hp2 others(13): Show HG00609.hp2 HG01175.hp2 HG02040.hp2 HG02055.hp1 HG02300.hp2 HG02738.hp2 HG03669.hp1 NA18939.hp1 NA18946.hp2 NA18968.hp2 NA18990.hp1 NA19007.hp2 NA19056.hp2 NA19063.hp1 NA19065.hp1 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0003 a0001c0004t0002 a0001c0001t0003 a0001c0004t0002	a0001c0001t0003g0015 a0001c0001t0003g0017 a0001c0001t0003g0033 others(13): Show a0001c0001t0003g0015 a0001c0001t0003g0017 a0001c0001t0003g0033 a0001c0001t0003g0036 a0001c0001t0003g0037 a0001c0001t0003g0043 a0001c0001t0003g0046 a0001c0001t0003g0069 a0001c0001t0003g0071 a0001c0001t0003g0136 a0001c0001t0003g0140 a0001c0001t0003g0148 a0001c0001t0003g0149 a0001c0001t0003g0150 a0001c0001t0003g0214 a0001c0004t0002g0268	16	278	0.0576	13	c.645 others(30): Show c.645-3904_645-3892dupTTTTTTTTTTTTT	CLASP2	ENSG00000163539.19	transcript	ENST00000682230.1	protein_coding	6/38			chr3	TogoVar
CLASP2_chr3_33491245_33723254	33713012	C C	CAGAAAAA others(6): Show CAGAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01516.hp1 HG01517.hp2 HG01106.hp1 HG01516.hp1 HG01517.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0240 a0001c0001t0002g0241 a0001c0001t0002g0242 a0001c0001t0002g0240 a0001c0001t0002g0241 a0001c0001t0002g0242	3	278	0.0108	13	c.195 others(30): Show c.195+4795_195+4796insTTTTTTTTTTTCT	CLASP2	ENSG00000163539.19	transcript	ENST00000682230.1	protein_coding	1/38			chr3	TogoVar
CLASRP_chr19_45034045_45075956	45063436	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01515.hp2 HG01516.hp1 HG01517.hp2 others(13): Show HG01515.hp2 HG01516.hp1 HG01517.hp2 HG02145.hp2 HG02258.hp2 HG02615.hp1 HG02647.hp2 HG02717.hp1 HG02895.hp2 HG03041.hp2 HG03195.hp2 HG03492.hp1 HG03516.hp2 HG03579.hp2 NA18984.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0017 a0001c0001t0001g0189 a0001c0001t0001g0194 others(12): Show a0001c0001t0001g0017 a0001c0001t0001g0189 a0001c0001t0001g0194 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0217 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0224 a0001c0001t0001g0290 a0001c0001t0001g0292 a0001c0001t0001g0296 a0001c0001t0001g0297 a0001c0001t0001g0327	16	364	0.0440	13	c.906 others(28): Show c.906-561_906-549dupTTTTTTTTTTTTT	CLASRP	ENSG00000104859.15	transcript	ENST00000221455.8	protein_coding	11/20		INFO_REALIGN_3_PRIME	chr19	TogoVar
CLCN1_chr7_143311111_143357083	143327257	A A	AAAGAAAG others(6): Show AAAGAAAGAAAAAG	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0029 a0001c0029	a0001c0029t0001 a0001c0029t0001	a0001c0029t0001g0377 a0001c0029t0001g0377	1	414	0.0024	13	c.853 others(30): Show c.853+2767_853+2768insGAAAGAAAAAGAA	CLCN1	ENSG00000188037.14	transcript	ENST00000343257.7	protein_coding	7/22		INFO_REALIGN_3_PRIME	chr7	TogoVar
CLCN3_chr4_169615578_169728673	169672220	T T	TAGATAGA others(6): Show TAGATAGATAGATA	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01175.hp2 HG01346.hp1 others(9): Show HG00639.hp2 HG01175.hp2 HG01346.hp1 HG01884.hp2 HG02145.hp2 HG02280.hp1 HG02451.hp1 HG02559.hp1 HG03130.hp2 HG03139.hp2 NA18940.hp1 NA20129.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0004 a0001c0003t0029 others(2): Show a0001c0003t0003 a0001c0003t0004 a0001c0003t0029 a0001c0003t0039 a0001c0003t0040	a0001c0003t0003g0018 a0001c0003t0003g0020 a0001c0003t0004g0037 others(9): Show a0001c0003t0003g0018 a0001c0003t0003g0020 a0001c0003t0004g0037 a0001c0003t0004g0042 a0001c0003t0004g0043 a0001c0003t0004g0048 a0001c0003t0004g0049 a0001c0003t0004g0050 a0001c0003t0004g0051 a0001c0003t0029g0047 a0001c0003t0039g0015 a0001c0003t0040g0278	12	288	0.0417	13	c.161 others(30): Show c.161-7830_161-7829insAGATAGATAGATA	CLCN3	ENSG00000109572.16	transcript	ENST00000513761.6	protein_coding	2/12			chr4	TogoVar
CLCN3_chr4_169615578_169728673	169720526	T T	TCTCTCTC others(6): Show TCTCTCTCTCTCTC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03927.hp1 HG03927.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0027	a0001c0001t0027g0223 a0001c0001t0027g0223	1	288	0.0035	13	c.52 others(22): Show c.529_*530insCTCTCTCTCTCTC	CLCN3	ENSG00000109572.16	transcript	ENST00000513761.6	protein_coding	13/13	530		chr4	TogoVar
CLCN4_chrX_10151975_10242660	10153116	A A	ATATATAT others(6): Show ATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01255.hp1 HG01261.hp1 HG01255.hp1 HG01261.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0168 a0001c0001t0010g0169 a0001c0001t0010g0168 a0001c0001t0010g0169	2	264	0.0076	13	c.-42 others(24): Show c.-4259_-4258insTATATATATATAT	CLCN4	ENSG00000073464.13	transcript	ENST00000380833.9	protein_coding		3858		chrX	TogoVar
CLCN4_chrX_10151975_10242660	10204613	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03486.hp2 NA18906.hp1 HG03486.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0034 a0001c0001t0006 a0001c0001t0034	a0001c0001t0006g0065 a0001c0001t0034g0073 a0001c0001t0006g0065 a0001c0001t0034g0073	2	264	0.0076	13	c.556 others(30): Show c.556-1721_556-1709dupTTTTTTTTTTTTT	CLCN4	ENSG00000073464.13	transcript	ENST00000380833.9	protein_coding	6/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
CLCN4_chrX_10151975_10242660	10206905	T T	TTGTTTTG others(6): Show TTGTTTTGTTTTTG	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp1 HG00323.hp2 others(38): Show HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00438.hp2 HG00621.hp1 HG00642.hp1 HG01123.hp1 HG01168.hp1 HG01255.hp1 HG01257.hp1 HG01261.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02129.hp1 HG02155.hp1 HG02155.hp2 HG02273.hp2 HG02683.hp2 HG03490.hp1 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG04115.hp1 HG04228.hp1 NA18612.hp1 NA18747.hp1 NA18965.hp1 NA18966.hp1 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18986.hp1 NA18998.hp2 NA19002.hp2 NA19010.hp1 NA19056.hp1 NA19060.hp2 NA19068.hp1 NA19080.hp1 NA19091.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0010 a0001c0001t0011 a0001c0001t0024 a0001c0001t0025 a0002c0004t0003	a0001c0001t0001g0016 a0001c0001t0001g0154 a0001c0001t0001g0183 others(38): Show a0001c0001t0001g0016 a0001c0001t0001g0154 a0001c0001t0001g0183 a0001c0001t0001g0197 a0001c0001t0001g0206 a0001c0001t0001g0230 a0001c0001t0001g0246 a0001c0001t0001g0252 a0001c0001t0002g0161 a0001c0001t0002g0193 a0001c0001t0003g0153 a0001c0001t0003g0157 a0001c0001t0003g0159 a0001c0001t0003g0170 a0001c0001t0003g0174 a0001c0001t0003g0176 a0001c0001t0003g0178 a0001c0001t0003g0185 a0001c0001t0003g0189 a0001c0001t0003g0192 a0001c0001t0003g0194 a0001c0001t0003g0195 a0001c0001t0003g0213 a0001c0001t0003g0224 a0001c0001t0003g0229 a0001c0001t0003g0237 a0001c0001t0003g0239 a0001c0001t0003g0240 a0001c0001t0004g0121 a0001c0001t0004g0158 a0001c0001t0004g0177 a0001c0001t0004g0187 a0001c0001t0004g0190 a0001c0001t0010g0168 a0001c0001t0010g0169 a0001c0001t0011g0181 a0001c0001t0011g0243 a0001c0001t0011g0247 a0001c0001t0024g0209 a0001c0001t0025g0129 a0002c0004t0003g0196	41	264	0.1553	13	c.843 others(28): Show c.843+129_843+130insTGTTTTGTTTTTG	CLCN4	ENSG00000073464.13	transcript	ENST00000380833.9	protein_coding	8/12			chrX	TogoVar
CLCN5_chrX_49917596_50104230	50066202	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01167.hp1 HG02145.hp1 others(8): Show HG00738.hp1 HG01167.hp1 HG02145.hp1 HG02280.hp1 HG02809.hp1 HG02922.hp2 HG03130.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0004 a0001c0001t0027 a0001c0002t0002 others(2): Show a0001c0001t0004 a0001c0001t0027 a0001c0002t0002 a0001c0002t0024 a0001c0003t0003	a0001c0001t0004g0169 a0001c0001t0027g0132 a0001c0002t0002g0009 others(8): Show a0001c0001t0004g0169 a0001c0001t0027g0132 a0001c0002t0002g0009 a0001c0002t0002g0014 a0001c0002t0002g0128 a0001c0002t0024g0010 a0001c0003t0003g0018 a0001c0003t0003g0161 a0001c0003t0003g0162 a0001c0003t0003g0168 a0001c0003t0003g0175	11	175	0.0629	13	c.164 others(30): Show c.164-3675_164-3663dupAAAAAAAAAAAAA	CLCN5	ENSG00000171365.17	transcript	ENST00000376091.8	protein_coding	4/14		INFO_REALIGN_3_PRIME	chrX	TogoVar
CLCN7_chr16_1439935_1480028	1440495	A A	AGAGAAGA others(6): Show AGAGAAGAGAAGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp2 NA18954.hp1 NA19056.hp1 others(1): Show HG03130.hp2 NA18954.hp1 NA19056.hp1 NA20905.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0004 a0001c0005t0004	a0001c0005t0004g0166 a0001c0005t0004g0167 a0001c0005t0004g0185 others(1): Show a0001c0005t0004g0166 a0001c0005t0004g0167 a0001c0005t0004g0185 a0001c0005t0004g0186	4	404	0.0099	13	c.61 others(24): Show c.6135_*6136insCTCTTCTCTTCTC	CLCN7	ENSG00000103249.19	transcript	ENST00000382745.9	protein_coding		4439		chr16	TogoVar
CLDN16_chr3_190383163_190417138	190392059	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG03453.hp1 HG02818.hp2 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0017 a0001c0001t0004 a0001c0001t0017	a0001c0001t0004g0077 a0001c0001t0017g0063 a0001c0001t0004g0077 a0001c0001t0017g0063	2	438	0.0046	13	c.114 others(30): Show c.114+3621_114+3633dupTTTTTTTTTTTTT	CLDN16	ENSG00000113946.4	transcript	ENST00000264734.3	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLDN19_chr1_42728093_42745236	42729447	A A	ATATATAT others(6): Show ATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0023 a0001c0001t0001g0023	1	428	0.0023	13	c.56 others(24): Show c.5638_*5639insATATATATATATA	CLDN19	ENSG00000164007.11	transcript	ENST00000296387.6	protein_coding		3645		chr1	TogoVar
CLDN19_chr1_42728093_42745236	42729449	A A	ATATATAT others(6): Show ATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00099.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0026 a0001c0001t0009g0026	1	428	0.0023	13	c.56 others(24): Show c.5636_*5637insATATATATATATA	CLDN19	ENSG00000164007.11	transcript	ENST00000296387.6	protein_coding		3643		chr1	TogoVar
CLDN34_chrX_9962358_9973352	9968882	G G	GGTTTTTT others(6): Show GGTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01106.hp1 NA20300.hp1 HG01106.hp1 NA20300.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0002 a0002c0004t0002	a0002c0004t0002g0000 a0002c0004t0002g0000	2	330	0.0061	13	c.88 others(22): Show c.880_*881insGTTTTTTTTTTTT	CLDN34	ENSG00000234469.4	transcript	ENST00000445307.4	protein_coding		531		chrX	TogoVar
CLDN34_chrX_9962358_9973352	9968882	G G	GTTTTTTG others(6): Show GTTTTTTGTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp1 HG01943.hp1 HG02027.hp1 others(7): Show HG01243.hp1 HG01943.hp1 HG02027.hp1 HG03239.hp2 HG03942.hp1 NA18999.hp1 NA19060.hp1 NA19075.hp1 NA19090.hp1 NA20300.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0000 a0001c0002t0001g0000	10	330	0.0303	13	c.88 others(22): Show c.880_*881insTTTTTTGTTTTTT	CLDN34	ENSG00000234469.4	transcript	ENST00000445307.4	protein_coding		531		chrX	TogoVar
CLDN7_chr17_7254903_7267478	7265112	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18986.hp2 NA19067.hp2 NA18986.hp2 NA19067.hp2	a0001 a0002 a0001 a0002	a0001c0003 a0002c0002 a0001c0003 a0002c0002	a0001c0003t0002 a0002c0002t0002 a0001c0003t0002 a0002c0002t0002	a0001c0003t0002g0003 a0002c0002t0002g0002 a0001c0003t0002g0003 a0002c0002t0002g0002	2	418	0.0048	13	c.-30 others(24): Show c.-3070_-3069insAAAAAAAAAAAAA	CLDN7	ENSG00000181885.18	transcript	ENST00000360325.11	protein_coding		2635		chr17	TogoVar
CLEC10A_chr17_7069537_7085251	7070600	A A	AAAAGAAA others(6): Show AAAAGAAAGAAAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01167.hp1 HG02451.hp1 HG03579.hp2 HG01167.hp1 HG02451.hp1 HG03579.hp2	a0001 a0001	a0001c0002 a0001c0005 a0001c0002 a0001c0005	a0001c0002t0001 a0001c0005t0005 a0001c0002t0001 a0001c0005t0005	a0001c0002t0001g0002 a0001c0002t0001g0085 a0001c0005t0005g0031 a0001c0002t0001g0002 a0001c0002t0001g0085 a0001c0005t0005g0031	3	458	0.0066	13	c.44 others(24): Show c.4453_*4454insCTTTTCTTTCTTT	CLEC10A	ENSG00000132514.14	transcript	ENST00000416562.7	protein_coding		3936		chr17	TogoVar
CLEC16A_chr16_10939564_11187186	11018748	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0002 a0002	a0002c0011 a0002c0011	a0002c0011t0006 a0002c0011t0006	a0002c0011t0006g0092 a0002c0011t0006g0092	1	274	0.0037	13	c.130 others(32): Show c.1304-1440_1304-1428dupAAAAAAAAAAAAA	CLEC16A	ENSG00000038532.17	transcript	ENST00000409790.6	protein_coding	11/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CLEC18A_chr16_69946334_69968986	69962639	T T	TCTTGCCT others(6): Show TCTTGCCTGGAGAA	intron_variant intron_variant	MODIFIER	HG03492.hp2 HG03492.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0183 a0003c0003t0002g0183	1	379	0.0026	13	c.121 others(30): Show c.1212-337_1212-336insCTTGCCTGGAGAA	CLEC18A	ENSG00000157322.18	transcript	ENST00000288040.11	protein_coding	10/11			chr16	TogoVar
CLEC18B_chr16_74403631_74426478	74408110	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18941.hp1 NA18973.hp2 NA19000.hp1 others(1): Show NA18941.hp1 NA18973.hp2 NA19000.hp1 NA19011.hp2	a0001 a0004 a0006 a0001 a0004 a0006	a0001c0001 a0004c0007 a0006c0009 a0001c0001 a0004c0007 a0006c0009	a0001c0001t0001 a0004c0007t0001 a0006c0009t0001 a0001c0001t0001 a0004c0007t0001 a0006c0009t0001	a0001c0001t0001g0002 a0001c0001t0001g0024 a0004c0007t0001g0086 others(1): Show a0001c0001t0001g0002 a0001c0001t0001g0024 a0004c0007t0001g0086 a0006c0009t0001g0020	4	287	0.0139	13	c.89 others(22): Show c.895_*896insTTTTTTTTTTTTT	CLEC18B	ENSG00000140839.13	transcript	ENST00000682950.1	protein_coding		520		chr16	TogoVar
CLEC18B_chr16_74403631_74426478	74408116	A A	AAAAAAAA others(6): Show AAAAAAAAAAAAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02622.hp1 HG02886.hp1 HG03471.hp2 HG02622.hp1 HG02886.hp1 HG03471.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0059 a0001c0002t0001g0060 a0001c0002t0001g0061 a0001c0002t0001g0059 a0001c0002t0001g0060 a0001c0002t0001g0061	3	287	0.0105	13	c.88 others(22): Show c.889_*890insCTTTTTTTTTTTT	CLEC18B	ENSG00000140839.13	transcript	ENST00000682950.1	protein_coding		514		chr16	TogoVar
CLEC19A_chr16_19280731_19315947	19294859	T T	TTGTGTTG others(6): Show TTGTGTTGCTGTGC	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00408.hp1 HG00558.hp1 others(37): Show HG00323.hp1 HG00408.hp1 HG00558.hp1 HG00609.hp2 HG00642.hp2 HG00738.hp2 HG01071.hp1 HG01123.hp2 HG01167.hp1 HG01346.hp1 HG01433.hp2 HG01952.hp1 HG02004.hp1 HG02056.hp1 HG02071.hp1 HG02109.hp2 HG02135.hp2 HG02148.hp1 HG02165.hp1 HG02683.hp2 HG02698.hp2 HG03490.hp1 HG03704.hp1 HG04228.hp1 HG06807.hp2 NA18943.hp2 NA18950.hp2 NA18956.hp2 NA18979.hp1 NA18980.hp1 NA18986.hp1 NA18992.hp1 NA18999.hp2 NA19002.hp1 NA19005.hp1 NA19009.hp1 NA19060.hp2 NA19063.hp2 NA19084.hp1 NA20129.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0006	a0001c0002 a0002c0003 a0003c0005 others(1): Show a0001c0002 a0002c0003 a0003c0005 a0006c0009	a0001c0002t0001 a0001c0002t0003 a0001c0002t0016 others(4): Show a0001c0002t0001 a0001c0002t0003 a0001c0002t0016 a0002c0003t0001 a0002c0003t0004 a0003c0005t0001 a0006c0009t0001	a0001c0002t0001g0025 a0001c0002t0001g0036 a0001c0002t0001g0052 others(34): Show a0001c0002t0001g0025 a0001c0002t0001g0036 a0001c0002t0001g0052 a0001c0002t0001g0108 a0001c0002t0001g0110 a0001c0002t0001g0112 a0001c0002t0001g0114 a0001c0002t0001g0116 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0131 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0193 a0001c0002t0001g0197 a0001c0002t0001g0201 a0001c0002t0001g0207 a0001c0002t0001g0210 a0001c0002t0001g0211 a0001c0002t0001g0213 a0001c0002t0001g0214 a0001c0002t0001g0216 a0001c0002t0001g0237 a0001c0002t0003g0209 a0001c0002t0003g0212 a0001c0002t0016g0111 a0002c0003t0001g0077 a0002c0003t0001g0113 a0002c0003t0001g0115 a0002c0003t0004g0025 a0003c0005t0001g0034 a0003c0005t0001g0035 a0003c0005t0001g0206 a0003c0005t0001g0208 a0003c0005t0001g0215 a0003c0005t0001g0218 a0006c0009t0001g0109	40	426	0.0939	13	c.89- others(28): Show c.89-3809_89-3797dupTTGCTGTGCTGTG	CLEC19A	ENSG00000261210.8	transcript	ENST00000636231.2	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr16	TogoVar
CLEC19A_chr16_19280731_19315947	19301727	G G	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02647.hp2 HG03453.hp2 HG02630.hp1 HG02647.hp2 HG03453.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0009	a0001c0002t0009g0044 a0001c0002t0009g0171 a0001c0002t0009g0044 a0001c0002t0009g0171	3	426	0.0070	13	c.255 others(30): Show c.255-2328_255-2327insTTTTTTTTTTTTT	CLEC19A	ENSG00000261210.8	transcript	ENST00000636231.2	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr16	TogoVar
CLEC4A_chr12_8118617_8143607	8134973	G G	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19076.hp1 NA19076.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0269 a0001c0001t0001g0269	1	458	0.0022	13	c.299 others(28): Show c.299-607_299-606insTTTTTTTTTTTTT	CLEC4A	ENSG00000111729.15	transcript	ENST00000229332.12	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr12	TogoVar
CLEC4A_chr12_8118617_8143607	8134974	T T	TTTTTTTT others(6): Show TTTTTTTTTGTTTG	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0005 a0002c0002t0005	a0002c0002t0005g0182 a0002c0002t0005g0182	1	458	0.0022	13	c.299 others(28): Show c.299-607_299-606insTTTTGTTTGTTTT	CLEC4A	ENSG00000111729.15	transcript	ENST00000229332.12	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr12	TogoVar

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