Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CCNT2_chr2_134913822_134964342	134931262	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00597.hp1 HG00741.hp1 others(12): Show HG00438.hp2 HG00597.hp1 HG00741.hp1 HG01255.hp2 HG02074.hp1 HG02145.hp1 HG03486.hp2 NA18956.hp1 NA18957.hp2 NA18960.hp1 NA18984.hp2 NA18993.hp2 NA18994.hp2 NA18995.hp1 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0013 a0001c0001t0003g0030 a0001c0001t0003g0186 others(9): Show a0001c0001t0003g0013 a0001c0001t0003g0030 a0001c0001t0003g0186 a0001c0001t0003g0188 a0001c0001t0003g0191 a0001c0001t0003g0193 a0001c0001t0003g0201 a0001c0001t0003g0202 a0001c0001t0003g0203 a0001c0001t0003g0204 a0001c0001t0003g0212 a0001c0001t0003g0220	15	404	0.0371	14	c.241 others(31): Show c.241-5567_241-5554dupTTTTTTTTTTTTTT	CCNT2	ENSG00000082258.13	transcript	ENST00000264157.10	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CCNYL1_chr2_207706640_207761174	207708084	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00673.hp1 HG01243.hp2 HG01891.hp2 others(24): Show HG00673.hp1 HG01243.hp2 HG01891.hp2 HG02027.hp1 HG02040.hp1 HG02071.hp2 HG02129.hp2 HG02602.hp2 HG02896.hp2 HG03139.hp1 HG03453.hp2 HG03704.hp2 NA18949.hp1 NA18965.hp2 NA18973.hp2 NA18983.hp2 NA19000.hp2 NA19011.hp2 NA19054.hp2 NA19076.hp2 NA19085.hp1 NA19087.hp1 NA19089.hp2 NA19090.hp1 NA19091.hp1 NA20300.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0008 others(23): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0008 a0001c0001t0001g0027 a0001c0001t0001g0031 a0001c0001t0001g0043 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0059 a0001c0001t0001g0067 a0001c0001t0001g0074 a0001c0001t0001g0076 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0095 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0110 a0001c0001t0001g0112 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0002g0145 a0001c0001t0002g0147	27	354	0.0763	14	c.-38 others(25): Show c.-3813_-3812insTTTTTTTTTTTTTT	CCNYL1	ENSG00000163249.13	transcript	ENST00000295414.8	protein_coding		3555		chr2	TogoVar
CCNYL1_chr2_207706640_207761174	207731290	A A	AGGTACTT others(7): Show AGGTACTTTACCTTT	intron_variant intron_variant	MODIFIER	NA18961.hp2 NA18961.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0097 a0001c0001t0001g0097	1	354	0.0028	14	c.331 others(31): Show c.331-2656_331-2643dupGGTACTTTACCTTT	CCNYL1	ENSG00000163249.13	transcript	ENST00000295414.8	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
CCNY_chr10_35331509_35577667	35416160	C C	CGTGTGTG others(7): Show CGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01243.hp1 NA18946.hp2 HG01243.hp1 NA18946.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0023 a0001c0001t0002 a0001c0001t0023	a0001c0001t0002g0023 a0001c0001t0023g0005 a0001c0001t0002g0023 a0001c0001t0023g0005	2	296	0.0068	14	c.155 others(33): Show c.155-67223_155-67210dupGTGTGTGTGTGTGT	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35465938	A A	AGAGAGAG others(7): Show AGAGAGAGAGTGTGT	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG02273.hp2 HG02293.hp2 others(1): Show HG01256.hp1 HG02273.hp2 HG02293.hp2 NA18949.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0048 a0001c0001t0002g0059 a0001c0001t0002g0110 others(1): Show a0001c0001t0002g0048 a0001c0001t0002g0059 a0001c0001t0002g0110 a0001c0001t0005g0049	4	296	0.0135	14	c.155 others(33): Show c.155-17465_155-17464insAGAGAGAGTGTGTG	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35473858	T T	TGATTTCT others(7): Show TGATTTCTGCATTTC	intron_variant intron_variant	MODIFIER	NA18954.hp1 NA18954.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0091 a0001c0001t0002g0091	1	296	0.0034	14	c.155 others(31): Show c.155-9545_155-9532dupGATTTCTGCATTTC	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35482749	G G	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG03017.hp2 NA18939.hp1 others(2): Show HG02280.hp2 HG03017.hp2 NA18939.hp1 NA18980.hp2 NA18991.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0168 a0001c0002t0001g0179 a0001c0002t0001g0232 others(2): Show a0001c0002t0001g0168 a0001c0002t0001g0179 a0001c0002t0001g0232 a0001c0002t0001g0263 a0001c0002t0001g0279	5	296	0.0169	14	c.155 others(29): Show c.155-616_155-603dupGTGTGTGTGTGTGT	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35548292	G G	GTATATAT others(7): Show GTATATATATGTATA	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0282 a0001c0001t0017g0282	1	296	0.0034	14	c.580 others(31): Show c.580-4718_580-4717insGTATATATATATAT	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	7/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCPG1_chr15_55350239_55413359	55363799	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0045 a0001c0002t0006g0045	1	354	0.0028	14	c.828 others(31): Show c.828+1375_828+1388dupAAAAAAAAAAAAAA	CCPG1	ENSG00000260916.8	transcript	ENST00000442196.8	protein_coding	7/8			chr15	TogoVar
CCPG1_chr15_55350239_55413359	55379161	C C	CGTGTGTG others(7): Show CGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00408.hp1 HG00609.hp2 others(14): Show HG00280.hp1 HG00408.hp1 HG00609.hp2 HG01891.hp2 HG02015.hp2 HG02080.hp1 HG02109.hp2 HG02559.hp1 HG02647.hp1 HG02976.hp1 HG03486.hp2 HG03516.hp1 NA18953.hp1 NA18967.hp1 NA19002.hp1 NA19030.hp1 NA19240.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0008 a0001c0002 a0001c0003 a0001c0008	a0001c0002t0001 a0001c0003t0002 a0001c0003t0003 others(1): Show a0001c0002t0001 a0001c0003t0002 a0001c0003t0003 a0001c0008t0002	a0001c0002t0001g0017 a0001c0002t0001g0058 a0001c0002t0001g0146 others(13): Show a0001c0002t0001g0017 a0001c0002t0001g0058 a0001c0002t0001g0146 a0001c0002t0001g0147 a0001c0002t0001g0268 a0001c0002t0001g0270 a0001c0003t0002g0297 a0001c0003t0002g0302 a0001c0003t0002g0303 a0001c0003t0002g0307 a0001c0003t0002g0312 a0001c0003t0003g0321 a0001c0003t0003g0323 a0001c0003t0003g0324 a0001c0003t0003g0327 a0001c0008t0002g0330	17	354	0.0480	14	c.176 others(29): Show c.176-799_176-786dupACACACACACACAC	CCPG1	ENSG00000260916.8	transcript	ENST00000442196.8	protein_coding	3/8			chr15	TogoVar
CCR2_chr3_46349111_46365940	46362340	C C	CTGTGTGT others(7): Show CTGTGTGTGTGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0008 a0001c0001t0001g0008	1	438	0.0023	14	c.37 others(25): Show c.3730_*3731insTGTGTGTGTGTGTG	CCR2	ENSG00000121807.7	transcript	ENST00000445132.3	protein_coding		1401		chr3	TogoVar
CCR3_chr3_46237460_46271706	46241166	G G	GCTCTCTC others(7): Show GCTCTCTCTCTCTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00673.hp2 HG01934.hp1 HG00673.hp2 HG01934.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0041 a0001c0001t0001g0071 a0001c0001t0001g0041 a0001c0001t0001g0071	2	408	0.0049	14	c.-13 others(25): Show c.-1384_-1383insCTCTCTCTCTCTCT	CCR3	ENSG00000183625.16	transcript	ENST00000395940.3	protein_coding		1293		chr3	TogoVar
CCR6_chr6_167118096_167144141	167130977	C C	CCTCCCTC others(7): Show CCTCCCTCCGGGACT	intron_variant intron_variant	MODIFIER	HG03927.hp2 NA18961.hp2 HG03927.hp2 NA18961.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0008 a0001c0002t0010 a0001c0001t0008 a0001c0002t0010	a0001c0001t0008g0335 a0001c0002t0010g0336 a0001c0001t0008g0335 a0001c0002t0010g0336	2	460	0.0044	14	c.-97 others(31): Show c.-97-5060_-97-5059insTCCCTCCGGGACTC	CCR6	ENSG00000112486.18	transcript	ENST00000341935.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
CCR6_chr6_167118096_167144141	167133930	G G	GTATATAT others(7): Show GTATATATATATATA	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0093 a0001c0002t0006g0093	1	460	0.0022	14	c.-97 others(31): Show c.-97-2107_-97-2106insATATATATATATAT	CCR6	ENSG00000112486.18	transcript	ENST00000341935.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
CCR6_chr6_167118096_167144141	167133932	G G	GTATATAT others(7): Show GTATATATATATATA	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG02486.hp2 HG03195.hp1 others(6): Show HG00621.hp2 HG02486.hp2 HG03195.hp1 HG03209.hp2 HG06807.hp1 NA18950.hp2 NA18987.hp2 NA18989.hp1 NA18993.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0001c0002 a0006c0013 a0001c0001 a0001c0002 a0006c0013	a0001c0001t0008 a0001c0001t0009 a0001c0001t0024 others(4): Show a0001c0001t0008 a0001c0001t0009 a0001c0001t0024 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0006c0013t0006	a0001c0001t0008g0343 a0001c0001t0009g0247 a0001c0001t0024g0249 others(5): Show a0001c0001t0008g0343 a0001c0001t0009g0247 a0001c0001t0024g0249 a0001c0002t0002g0036 a0001c0002t0002g0065 a0001c0002t0003g0286 a0001c0002t0004g0293 a0006c0013t0006g0095	9	460	0.0196	14	c.-97 others(31): Show c.-97-2081_-97-2068dupTATATATATATATA	CCR6	ENSG00000112486.18	transcript	ENST00000341935.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
CCR6_chr6_167118096_167144141	167133932	G G	GTGTATAT others(7): Show GTGTATATATATATA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00597.hp2 others(27): Show HG00099.hp2 HG00140.hp1 HG00597.hp2 HG00741.hp1 HG01109.hp2 HG01516.hp2 HG01517.hp1 HG02071.hp2 HG02074.hp1 HG02630.hp1 HG02735.hp2 HG03017.hp2 HG03654.hp1 HG04199.hp1 NA18747.hp2 NA18946.hp2 NA18957.hp1 NA18959.hp2 NA18972.hp2 NA18975.hp2 NA18977.hp2 NA18997.hp1 NA18998.hp1 NA19006.hp1 NA19057.hp2 NA19070.hp1 NA19074.hp2 NA19085.hp1 NA20752.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0005 a0001c0001t0016 others(3): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0016 a0001c0002t0002 a0001c0002t0003 a0001c0002t0011	a0001c0001t0001g0006 a0001c0001t0001g0020 a0001c0001t0001g0024 others(22): Show a0001c0001t0001g0006 a0001c0001t0001g0020 a0001c0001t0001g0024 a0001c0001t0001g0089 a0001c0001t0001g0101 a0001c0001t0001g0118 a0001c0001t0001g0150 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0174 a0001c0001t0001g0186 a0001c0001t0001g0226 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0267 a0001c0001t0001g0367 a0001c0001t0005g0006 a0001c0001t0005g0020 a0001c0001t0016g0136 a0001c0002t0002g0031 a0001c0002t0002g0038 a0001c0002t0002g0039 a0001c0002t0002g0155 a0001c0002t0003g0031 a0001c0002t0011g0173	30	460	0.0652	14	c.-97 others(31): Show c.-97-2105_-97-2104insGTATATATATATAT	CCR6	ENSG00000112486.18	transcript	ENST00000341935.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
CCR6_chr6_167118096_167144141	167133932	G G	GTGTGTAT others(7): Show GTGTGTATATATATA	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02083.hp1 HG02155.hp2 others(1): Show HG01081.hp1 HG02083.hp1 HG02155.hp2 NA18990.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0002t0037 a0001c0001t0001 a0001c0002t0002 a0001c0002t0037	a0001c0001t0001g0180 a0001c0002t0002g0190 a0001c0002t0002g0260 others(1): Show a0001c0001t0001g0180 a0001c0002t0002g0190 a0001c0002t0002g0260 a0001c0002t0037g0191	4	460	0.0087	14	c.-97 others(31): Show c.-97-2105_-97-2104insGTGTATATATATAT	CCR6	ENSG00000112486.18	transcript	ENST00000341935.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
CCR6_chr6_167118096_167144141	167133932	G G	GTGTGTGT others(7): Show GTGTGTGTATATATA	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01433.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0269 a0001c0003t0004g0269	1	460	0.0022	14	c.-97 others(31): Show c.-97-2105_-97-2104insGTGTGTATATATAT	CCR6	ENSG00000112486.18	transcript	ENST00000341935.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
CCR6_chr6_167118096_167144141	167133964	A A	ATATATAT others(7): Show ATATATATATATATG	intron_variant intron_variant	MODIFIER	NA19056.hp2 NA19056.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0128 a0001c0003t0004g0128	1	460	0.0022	14	c.-97 others(31): Show c.-97-2068_-97-2067insTATATATGTATATA	CCR6	ENSG00000112486.18	transcript	ENST00000341935.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
CCR8_chr3_39324709_39338680	39337233	C C	CATATATA others(7): Show CATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp1 HG01109.hp2 HG01243.hp1 others(7): Show HG00639.hp1 HG01109.hp2 HG01243.hp1 HG02486.hp1 HG02647.hp2 HG02818.hp1 HG02895.hp1 HG02896.hp2 HG02965.hp2 HG03098.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0002 a0001c0001t0001g0014 a0002c0002t0001g0003 a0001c0001t0001g0002 a0001c0001t0001g0014 a0002c0002t0001g0003	10	398	0.0251	14	c.38 others(25): Show c.3834_*3835insATATATATATATAT	CCR8	ENSG00000179934.7	transcript	ENST00000326306.5	protein_coding		3554		chr3	TogoVar
CCSAP_chr1_229316015_229348047	229337670	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19072.hp2 NA19072.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0115 a0001c0002t0002g0115	1	436	0.0023	14	c.367 others(31): Show c.367+4428_367+4429insTTTTTTTTTTTTTT	CCSAP	ENSG00000154429.11	transcript	ENST00000284617.7	protein_coding	2/3			chr1	TogoVar
CCSAP_chr1_229316015_229348047	229337717	A A	ATATATAT others(7): Show ATATATATATATATG	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00735.hp1 HG00738.hp2 others(11): Show HG00438.hp1 HG00735.hp1 HG00738.hp2 HG01981.hp1 HG02165.hp1 HG02735.hp1 HG03540.hp1 HG03688.hp1 HG04199.hp1 NA18945.hp2 NA18959.hp1 NA18982.hp1 NA19012.hp2 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0002t0002	a0001c0001t0002g0067 a0001c0001t0002g0225 a0001c0001t0002g0258 others(11): Show a0001c0001t0002g0067 a0001c0001t0002g0225 a0001c0001t0002g0258 a0001c0001t0002g0259 a0001c0001t0003g0130 a0001c0001t0003g0240 a0001c0001t0003g0241 a0001c0001t0003g0331 a0001c0001t0004g0096 a0001c0001t0004g0332 a0001c0002t0002g0316 a0001c0002t0002g0361 a0001c0002t0002g0362 a0001c0002t0002g0372	14	436	0.0321	14	c.367 others(31): Show c.367+4381_367+4382insCATATATATATATA	CCSAP	ENSG00000154429.11	transcript	ENST00000284617.7	protein_coding	2/3			chr1	TogoVar
CCSAP_chr1_229316015_229348047	229345525	A A	AACACACA others(7): Show AACACACACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0368 a0001c0001t0001g0368	1	436	0.0023	14	c.-26 others(25): Show c.-2663_-2662insGTGTGTGTGTGTGT	CCSAP	ENSG00000154429.11	transcript	ENST00000284617.7	protein_coding		2479		chr1	TogoVar
CCSER1_chr4_90122394_91610295	90196656	T T	TACACACA others(7): Show TACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02723.hp1 HG02723.hp2 others(2): Show HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02897.hp1 NA19240.hp2	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0001 a0002c0002 a0006c0006 a0001c0001 a0002c0002 a0006c0006	a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 others(2): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0002c0002t0003 a0006c0006t0016	a0001c0001t0003g0012 a0001c0001t0004g0022 a0001c0001t0007g0007 others(2): Show a0001c0001t0003g0012 a0001c0001t0004g0022 a0001c0001t0007g0007 a0002c0002t0003g0013 a0006c0006t0016g0020	5	38	0.1316	14	c.-42 others(33): Show c.-42+68845_-42+68858dupCACACACACACACA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90200061	G G	GACACACA others(7): Show GACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG03209.hp2 NA19240.hp1 HG02897.hp1 HG03209.hp2 NA19240.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0006 a0001c0001 a0006c0006	a0001c0001t0007 a0001c0001t0013 a0006c0006t0016 a0001c0001t0007 a0001c0001t0013 a0006c0006t0016	a0001c0001t0007g0036 a0001c0001t0013g0035 a0006c0006t0016g0020 a0001c0001t0007g0036 a0001c0001t0013g0035 a0006c0006t0016g0020	3	38	0.0790	14	c.-42 others(33): Show c.-42+72249_-42+72262dupACACACACACACAC	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90206781	A A	ATTGACAG others(7): Show ATTGACAGTGGGGTG	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01192.hp1 HG01243.hp1 others(32): Show HG01099.hp2 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01884.hp1 HG01884.hp2 HG02109.hp1 HG02109.hp2 HG02258.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02897.hp1 HG02897.hp2 HG03017.hp1 HG03017.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03239.hp2 HG03516.hp1 HG03516.hp2 NA18906.hp1 NA18906.hp2 NA19240.hp1 NA19240.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0006	a0001c0001 a0001c0003 a0001c0008 others(5): Show a0001c0001 a0001c0003 a0001c0008 a0002c0002 a0003c0005 a0004c0004 a0005c0007 a0006c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(24): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0001t0015 a0001c0001t0020 a0001c0003t0002 a0001c0008t0019 a0002c0002t0001 a0002c0002t0003 a0002c0002t0006 a0002c0002t0008 a0002c0002t0017 a0002c0002t0018 a0003c0005t0005 a0003c0005t0010 a0004c0004t0001 a0004c0004t0004 a0005c0007t0012 a0006c0006t0016	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0016 others(32): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0016 a0001c0001t0001g0032 a0001c0001t0002g0027 a0001c0001t0003g0012 a0001c0001t0003g0034 a0001c0001t0004g0005 a0001c0001t0004g0022 a0001c0001t0005g0017 a0001c0001t0006g0023 a0001c0001t0007g0007 a0001c0001t0007g0036 a0001c0001t0008g0038 a0001c0001t0009g0037 a0001c0001t0011g0003 a0001c0001t0013g0035 a0001c0001t0015g0019 a0001c0001t0020g0033 a0001c0003t0002g0014 a0001c0003t0002g0015 a0001c0003t0002g0026 a0001c0008t0019g0029 a0002c0002t0001g0006 a0002c0002t0003g0013 a0002c0002t0006g0025 a0002c0002t0008g0030 a0002c0002t0017g0008 a0002c0002t0018g0009 a0003c0005t0005g0011 a0003c0005t0010g0004 a0004c0004t0001g0021 a0004c0004t0004g0018 a0005c0007t0012g0010 a0006c0006t0016g0020	35	38	0.9211	14	c.-42 others(33): Show c.-42+78952_-42+78953insGACAGTGGGGTGTT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90271826	T T	TTATATAT others(7): Show TTATATATATATATA	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0003 a0001c0001t0011g0003	1	38	0.0263	14	c.-41 others(33): Show c.-41-36394_-41-36381dupATATATATATATAT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90469524	A A	AACACACA others(7): Show AACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	38	0.0263	14	c.172 others(33): Show c.1724+1200_1724+1213dupCACACACACACACA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90579015	T T	TGATTGCT others(7): Show TGATTGCTTCTTTAC	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01192.hp1 HG01192.hp2 others(26): Show HG01099.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01884.hp1 HG02109.hp1 HG02258.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02897.hp1 HG02897.hp2 HG03017.hp1 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp2 HG03516.hp2 NA18906.hp1 NA18906.hp2 NA19240.hp1 NA19240.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0006	a0001c0001 a0001c0003 a0001c0008 others(5): Show a0001c0001 a0001c0003 a0001c0008 a0002c0002 a0003c0005 a0004c0004 a0005c0007 a0006c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(20): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0001t0015 a0001c0001t0020 a0001c0003t0002 a0001c0008t0019 a0002c0002t0001 a0002c0002t0003 a0002c0002t0006 a0002c0002t0008 a0002c0002t0018 a0003c0005t0010 a0004c0004t0001 a0004c0004t0004 a0005c0007t0012 a0006c0006t0016	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0016 others(26): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0016 a0001c0001t0002g0027 a0001c0001t0003g0012 a0001c0001t0003g0031 a0001c0001t0003g0034 a0001c0001t0004g0022 a0001c0001t0007g0007 a0001c0001t0007g0036 a0001c0001t0008g0038 a0001c0001t0009g0037 a0001c0001t0011g0003 a0001c0001t0013g0035 a0001c0001t0015g0019 a0001c0001t0020g0033 a0001c0003t0002g0014 a0001c0003t0002g0015 a0001c0008t0019g0029 a0002c0002t0001g0006 a0002c0002t0003g0013 a0002c0002t0006g0025 a0002c0002t0008g0030 a0002c0002t0018g0009 a0003c0005t0010g0004 a0004c0004t0001g0021 a0004c0004t0004g0018 a0005c0007t0012g0010 a0006c0006t0016g0020	29	38	0.7632	14	c.172 others(35): Show c.1725-49010_1725-49009insGATTGCTTCTTTAC	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	5/10			chr4	TogoVar
CCSER1_chr4_90122394_91610295	90732027	T T	TTCTCTCT others(7): Show TTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG02886.hp1 NA18906.hp1 HG02886.hp1 NA18906.hp1	a0002 a0003 a0002 a0003	a0002c0002 a0003c0005 a0002c0002 a0003c0005	a0002c0002t0008 a0003c0005t0005 a0002c0002t0008 a0003c0005t0005	a0002c0002t0008g0030 a0003c0005t0005g0011 a0002c0002t0008g0030 a0003c0005t0005g0011	2	38	0.0526	14	c.201 others(33): Show c.2010+8057_2010+8070dupTCTCTCTCTCTCTC	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90811983	T T	TAAACACA others(7): Show TAAACACACACACAC	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG02897.hp1	a0006 a0006	a0006c0006 a0006c0006	a0006c0006t0016 a0006c0006t0016	a0006c0006t0016g0020 a0006c0006t0016g0020	1	38	0.0263	14	c.201 others(33): Show c.2011-3778_2011-3777insAACACACACACACA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90811995	C C	CACACACA others(7): Show CACACACACATATAT	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp2 NA18906.hp1 HG02809.hp1 HG02809.hp2 NA18906.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0008 a0002c0002t0008 a0001c0001t0001 a0001c0001t0008 a0002c0002t0008	a0001c0001t0001g0002 a0001c0001t0008g0038 a0002c0002t0008g0030 a0001c0001t0001g0002 a0001c0001t0008g0038 a0002c0002t0008g0030	3	38	0.0790	14	c.201 others(33): Show c.2011-3766_2011-3765insCACACACATATATA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90932908	G G	GAAAGAAA others(7): Show GAAAGAAAGAAAGAA	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG01192.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0031 a0001c0001t0003g0031	1	38	0.0263	14	c.217 others(33): Show c.2172+9462_2172+9463insAAGAAAGAAAGAAA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90937480	A A	AACACACA others(7): Show AACACACACACACAC	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0019 a0001c0008t0019	a0001c0008t0019g0029 a0001c0008t0019g0029	1	38	0.0263	14	c.217 others(35): Show c.2172+14043_2172+14056dupCACACACACACACA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	91296449	T T	TTATATAT others(7): Show TTATATATATATATA	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0035 a0001c0001t0013g0035	1	38	0.0263	14	c.221 others(37): Show c.2217+210459_2217+210472dupATATATATATATAT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	91392363	G G	GCACACAC others(7): Show GCACACACGCACACA	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01243.hp1 HG01884.hp2 others(7): Show HG01192.hp1 HG01243.hp1 HG01884.hp2 HG02109.hp2 HG02258.hp1 HG02717.hp2 HG03239.hp2 HG03516.hp1 NA18906.hp2 NA19240.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0005	a0001c0001 a0001c0003 a0002c0002 others(2): Show a0001c0001 a0001c0003 a0002c0002 a0004c0004 a0005c0007	a0001c0001t0001 a0001c0001t0005 a0001c0001t0011 others(5): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0011 a0001c0001t0013 a0001c0003t0002 a0002c0002t0001 a0004c0004t0001 a0005c0007t0012	a0001c0001t0001g0001 a0001c0001t0001g0024 a0001c0001t0001g0032 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0024 a0001c0001t0001g0032 a0001c0001t0005g0017 a0001c0001t0011g0003 a0001c0001t0013g0035 a0001c0003t0002g0026 a0002c0002t0001g0006 a0004c0004t0001g0021 a0005c0007t0012g0010	10	38	0.2632	14	c.221 others(37): Show c.2218-206202_2218-206201insGCACACACACACAC	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	91411491	C C	CATATATA others(7): Show CATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG03209.hp1 HG01243.hp1 HG03209.hp1	a0002 a0005 a0002 a0005	a0002c0002 a0005c0007 a0002c0002 a0005c0007	a0002c0002t0018 a0005c0007t0012 a0002c0002t0018 a0005c0007t0012	a0002c0002t0018g0009 a0005c0007t0012g0010 a0002c0002t0018g0009 a0005c0007t0012g0010	2	38	0.0526	14	c.221 others(37): Show c.2218-187059_2218-187046dupTATATATATATATA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER2_chr10_84323589_84523517	84332436	A A	ATATATAT others(7): Show ATATATATATATTTT	intron_variant intron_variant	MODIFIER	HG03704.hp1 HG03704.hp1	a0005 a0005	a0005c0007 a0005c0007	a0005c0007t0002 a0005c0007t0002	a0005c0007t0002g0052 a0005c0007t0002g0052	1	370	0.0027	14	c.-40 others(31): Show c.-40+3629_-40+3630insATATATATATTTTT	CCSER2	ENSG00000107771.17	transcript	ENST00000372088.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCSER2_chr10_84323589_84523517	84385004	A A	AACACACA others(7): Show AACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG01928.hp2 HG02135.hp2 others(24): Show HG00408.hp1 HG01928.hp2 HG02135.hp2 HG02559.hp2 HG02615.hp2 HG02886.hp2 HG02897.hp2 HG03098.hp2 HG03130.hp2 HG03516.hp1 NA18747.hp1 NA18942.hp1 NA18950.hp2 NA18957.hp1 NA18968.hp1 NA18969.hp1 NA18969.hp2 NA18978.hp1 NA18990.hp2 NA18999.hp1 NA19011.hp1 NA19030.hp2 NA19062.hp1 NA19064.hp1 NA19078.hp1 NA19081.hp2 NA19084.hp2	a0002 a0003 a0002 a0003	a0002c0002 a0002c0003 a0003c0004 a0002c0002 a0002c0003 a0003c0004	a0002c0002t0005 a0002c0002t0014 a0002c0002t0015 others(3): Show a0002c0002t0005 a0002c0002t0014 a0002c0002t0015 a0002c0003t0006 a0003c0004t0007 a0003c0004t0019	a0002c0002t0005g0076 a0002c0002t0005g0077 a0002c0002t0005g0078 others(24): Show a0002c0002t0005g0076 a0002c0002t0005g0077 a0002c0002t0005g0078 a0002c0002t0005g0079 a0002c0002t0005g0083 a0002c0002t0005g0086 a0002c0002t0005g0087 a0002c0002t0005g0088 a0002c0002t0005g0089 a0002c0002t0005g0090 a0002c0002t0005g0094 a0002c0002t0005g0095 a0002c0002t0005g0096 a0002c0002t0005g0097 a0002c0002t0005g0100 a0002c0002t0014g0092 a0002c0002t0015g0081 a0002c0003t0006g0019 a0002c0003t0006g0023 a0003c0004t0007g0042 a0003c0004t0007g0043 a0003c0004t0007g0045 a0003c0004t0007g0047 a0003c0004t0007g0071 a0003c0004t0007g0072 a0003c0004t0007g0341 a0003c0004t0019g0044	27	370	0.0730	14	c.161 others(35): Show c.1614+11206_1614+11219dupACACACACACACAC	CCSER2	ENSG00000107771.17	transcript	ENST00000372088.8	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCSER2_chr10_84323589_84523517	84394385	A A	ATGTGTGT others(7): Show ATGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01975.hp2 HG02148.hp2 HG04184.hp2 others(2): Show HG01975.hp2 HG02148.hp2 HG04184.hp2 NA18944.hp1 NA18990.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0027 a0001c0001t0001 a0001c0001t0027	a0001c0001t0001g0260 a0001c0001t0001g0264 a0001c0001t0001g0299 others(2): Show a0001c0001t0001g0260 a0001c0001t0001g0264 a0001c0001t0001g0299 a0001c0001t0001g0315 a0001c0001t0027g0311	5	370	0.0135	14	c.161 others(35): Show c.1614+20596_1614+20609dupGTGTGTGTGTGTGT	CCSER2	ENSG00000107771.17	transcript	ENST00000372088.8	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCSER2_chr10_84323589_84523517	84419364	A A	AAATAAAA others(7): Show AAATAAAATAAAAAT	intron_variant intron_variant	MODIFIER	NA19084.hp2 NA19084.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0015 a0002c0002t0015	a0002c0002t0015g0081 a0002c0002t0015g0081	1	370	0.0027	14	c.170 others(33): Show c.1705+1505_1705+1506insTAAAATAAAAATAA	CCSER2	ENSG00000107771.17	transcript	ENST00000372088.8	protein_coding	4/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCSER2_chr10_84323589_84523517	84441734	A A	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19087.hp1 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0347 a0001c0001t0001g0347	1	370	0.0027	14	c.206 others(33): Show c.2064+3028_2064+3029insTTTTTTTTTTTTTT	CCSER2	ENSG00000107771.17	transcript	ENST00000372088.8	protein_coding	6/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCSER2_chr10_84323589_84523517	84483953	T T	TTATATAT others(7): Show TTATATATATATATA	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG02004.hp1 HG01099.hp1 HG02004.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0005 a0002c0002t0005	a0002c0002t0005g0084 a0002c0002t0005g0085 a0002c0002t0005g0084 a0002c0002t0005g0085	2	370	0.0054	14	c.232 others(33): Show c.2325+6320_2325+6333dupTATATATATATATA	CCSER2	ENSG00000107771.17	transcript	ENST00000372088.8	protein_coding	9/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCSER2_chr10_84323589_84523517	84483995	A A	ATATATAT others(7): Show ATATATATATATATG	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00280.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0005 a0002c0002t0005	a0002c0002t0005g0099 a0002c0002t0005g0099	1	370	0.0027	14	c.232 others(33): Show c.2325+6333_2325+6334insTATATATATATGTA	CCSER2	ENSG00000107771.17	transcript	ENST00000372088.8	protein_coding	9/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCT2_chr12_69580459_69606570	69580494	A A	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00544.hp2 HG00544.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0009 a0001c0002t0002g0009	1	410	0.0024	14	c.-50 others(25): Show c.-5028_-5027insTTTTTTTTTTTTTT	CCT2	ENSG00000166226.13	transcript	ENST00000299300.11	protein_coding		4964		chr12	TogoVar
CCT7_chr2_73229308_73258005	73252324	G G	GATATATA others(7): Show GATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG02055.hp2 HG02109.hp1 others(7): Show HG01261.hp1 HG02055.hp2 HG02109.hp1 HG02622.hp1 HG02630.hp1 HG02723.hp2 HG03098.hp2 HG03486.hp1 HG03579.hp1 NA19043.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0014 a0004c0009 a0001c0001 a0001c0014 a0004c0009	a0001c0001t0001 a0001c0014t0001 a0004c0009t0001 a0001c0001t0001 a0001c0014t0001 a0004c0009t0001	a0001c0001t0001g0018 a0001c0001t0001g0046 a0001c0001t0001g0114 others(4): Show a0001c0001t0001g0018 a0001c0001t0001g0046 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0146 a0001c0014t0001g0144 a0004c0009t0001g0137	10	378	0.0265	14	c.141 others(31): Show c.1411-302_1411-289dupTATATATATATATA	CCT7	ENSG00000135624.17	transcript	ENST00000258091.10	protein_coding	11/11		INFO_REALIGN_3_PRIME	chr2	TogoVar
CCZ1B_chr7_6793937_6831275	6804424	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01516.hp2 HG02922.hp1 HG01516.hp2 HG02922.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0003 a0002c0003t0003	a0002c0003t0003g0106 a0002c0003t0003g0169 a0002c0003t0003g0106 a0002c0003t0003g0169	2	354	0.0057	14	c.110 others(31): Show c.1106+513_1106+514insTTTTTTTTTTTTTT	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding	12/14			chr7	TogoVar
CCZ1B_chr7_6793937_6831275	6804433	A A	AAAAAAAA others(7): Show AAAAAAAAAAAAAAT	intron_variant intron_variant	MODIFIER	NA19002.hp1 NA19002.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0003 a0002c0003t0003	a0002c0003t0003g0160 a0002c0003t0003g0160	1	354	0.0028	14	c.110 others(31): Show c.1106+504_1106+505insATTTTTTTTTTTTT	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding	12/14			chr7	TogoVar
CCZ1B_chr7_6793937_6831275	6825641	C C	CCACACAC others(7): Show CCACACACACACACA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00735.hp1 HG00741.hp2 others(61): Show HG00099.hp1 HG00735.hp1 HG00741.hp2 HG01099.hp1 HG01168.hp2 HG01169.hp1 HG01192.hp1 HG01358.hp1 HG01928.hp2 HG01943.hp1 HG01952.hp2 HG01975.hp1 HG01978.hp1 HG01981.hp1 HG02004.hp1 HG02083.hp2 HG02148.hp2 HG02293.hp1 HG02300.hp2 HG02523.hp1 HG02602.hp2 HG02735.hp2 HG03239.hp1 HG03492.hp2 HG03704.hp2 HG03710.hp2 HG03834.hp2 HG03942.hp2 HG04115.hp2 HG04228.hp1 NA18747.hp2 NA18939.hp2 NA18941.hp1 NA18943.hp2 NA18945.hp1 NA18946.hp1 NA18949.hp1 NA18950.hp2 NA18953.hp1 NA18955.hp2 NA18957.hp2 NA18961.hp2 NA18964.hp1 NA18969.hp1 NA18971.hp1 NA18972.hp1 NA18973.hp1 NA18980.hp1 NA18991.hp2 NA18999.hp2 NA19002.hp1 NA19007.hp1 NA19055.hp1 NA19062.hp2 NA19068.hp2 NA19070.hp1 NA19075.hp2 NA19076.hp1 NA19080.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp2 NA19091.hp1 NA20905.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0003 a0004c0012 a0001c0001 a0002c0003 a0004c0012	a0001c0001t0002 a0002c0003t0003 a0002c0003t0004 others(2): Show a0001c0001t0002 a0002c0003t0003 a0002c0003t0004 a0002c0003t0005 a0004c0012t0003	a0001c0001t0002g0240 a0002c0003t0003g0003 a0002c0003t0003g0021 others(53): Show a0001c0001t0002g0240 a0002c0003t0003g0003 a0002c0003t0003g0021 a0002c0003t0003g0103 a0002c0003t0003g0104 a0002c0003t0003g0105 a0002c0003t0003g0113 a0002c0003t0003g0114 a0002c0003t0003g0115 a0002c0003t0003g0116 a0002c0003t0003g0117 a0002c0003t0003g0118 a0002c0003t0003g0119 a0002c0003t0003g0120 a0002c0003t0003g0121 a0002c0003t0003g0122 a0002c0003t0003g0123 a0002c0003t0003g0124 a0002c0003t0003g0125 a0002c0003t0003g0126 a0002c0003t0003g0127 a0002c0003t0003g0128 a0002c0003t0003g0129 a0002c0003t0003g0130 a0002c0003t0003g0131 a0002c0003t0003g0132 a0002c0003t0003g0133 a0002c0003t0003g0135 a0002c0003t0003g0136 a0002c0003t0003g0137 a0002c0003t0003g0139 a0002c0003t0003g0140 a0002c0003t0003g0145 a0002c0003t0003g0146 a0002c0003t0003g0147 a0002c0003t0003g0148 a0002c0003t0003g0149 a0002c0003t0003g0150 a0002c0003t0003g0151 a0002c0003t0003g0152 a0002c0003t0003g0153 a0002c0003t0003g0154 a0002c0003t0003g0155 a0002c0003t0003g0156 a0002c0003t0003g0157 a0002c0003t0003g0160 a0002c0003t0004g0159 a0002c0003t0005g0004 a0002c0003t0005g0022 a0002c0003t0005g0138 a0002c0003t0005g0141 a0002c0003t0005g0142 a0002c0003t0005g0143 a0002c0003t0005g0144 a0002c0003t0005g0158 a0004c0012t0003g0134	64	354	0.1808	14	c.120 others(29): Show c.120+423_120+436dupTGTGTGTGTGTGTG	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding	1/14			chr7	TogoVar
CCZ1B_chr7_6793937_6831275	6827388	G G	GCCCCCCC others(7): Show GCCCCCCCCCCCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0006 a0003c0004t0006	a0003c0004t0006g0031 a0003c0004t0006g0031	1	354	0.0028	14	c.-11 others(25): Show c.-1192_-1191insGGGGGGGGGGGGGG	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding		1114		chr7	TogoVar

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