Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CDH12_chr5_21745673_22858344	21751632	T T	TTGTGTGT others(7): Show TTGTGTGTGTGTGTG	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0024 a0001c0002t0024	a0001c0002t0024g0007 a0001c0002t0024g0007	1	60	0.0167	14	c.91 others(22): Show c.91_*104dupCACACACACACACA	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	15/15	104		chr5	TogoVar
CDH12_chr5_21745673_22858344	21804643	A A	AAAACACA others(7): Show AAAACACACACACAC	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0004 a0002c0006t0004	a0002c0006t0004g0018 a0002c0006t0004g0018	1	60	0.0167	14	c.100 others(33): Show c.1003-2224_1003-2223insGTGTGTGTGTGTTT	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	9/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	21816624	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0021 a0002c0004t0021	a0002c0004t0021g0013 a0002c0004t0021g0013	1	60	0.0167	14	c.100 others(31): Show c.1002+307_1002+320dupTTTTTTTTTTTTTT	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	9/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	21891572	T T	TACACACA others(7): Show TACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG02622.hp2 HG03579.hp2 others(1): Show HG01361.hp1 HG02622.hp2 HG03579.hp2 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0002c0004 a0001c0002 a0002c0003 a0002c0004	a0001c0002t0015 a0002c0003t0002 a0002c0004t0003 others(1): Show a0001c0002t0015 a0002c0003t0002 a0002c0004t0003 a0002c0004t0006	a0001c0002t0015g0032 a0002c0003t0002g0011 a0002c0004t0003g0041 others(1): Show a0001c0002t0015g0032 a0002c0003t0002g0011 a0002c0004t0003g0041 a0002c0004t0006g0037	4	60	0.0667	14	c.527 others(33): Show c.527-36796_527-36783dupGTGTGTGTGTGTGT	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	6/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	21938723	C C	CATATATA others(7): Show CATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03486.hp2 HG03225.hp1 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0025 a0001c0001t0001 a0001c0002t0025	a0001c0001t0001g0042 a0001c0002t0025g0019 a0001c0001t0001g0042 a0001c0002t0025g0019	2	60	0.0333	14	c.526 others(33): Show c.526+36354_526+36367dupATATATATATATAT	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	6/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	21938748	A A	ATATATAT others(7): Show ATATATATATATATC	intron_variant intron_variant	MODIFIER	HG02647.hp1 NA18906.hp1 HG02647.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0016 a0001c0002t0004 a0001c0001t0016 a0001c0002t0004	a0001c0001t0016g0045 a0001c0002t0004g0008 a0001c0001t0016g0045 a0001c0002t0004g0008	2	60	0.0333	14	c.526 others(33): Show c.526+36342_526+36343insGATATATATATATA	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	6/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	21942334	G G	GTATATAT others(7): Show GTATATATATATATA	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0012 a0002c0004t0012	a0002c0004t0012g0020 a0002c0004t0012g0020	1	60	0.0167	14	c.526 others(33): Show c.526+32743_526+32756dupTATATATATATATA	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	6/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22100652	G G	GACACACA others(7): Show GACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG01358.hp1	a0006 a0006	a0006c0009 a0006c0009	a0006c0009t0001 a0006c0009t0001	a0006c0009t0001g0006 a0006c0009t0001g0006	1	60	0.0167	14	c.-18 others(35): Show c.-186-21804_-186-21791dupGTGTGTGTGTGTGT	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	4/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22138845	A A	AATATATA others(7): Show AATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0047 a0001c0001t0001g0047	1	60	0.0167	14	c.-18 others(35): Show c.-186-59997_-186-59984dupATATATATATATAT	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	4/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22315119	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03471.hp2 HG03669.hp2 others(1): Show HG03209.hp1 HG03471.hp2 HG03669.hp2 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0002c0004	a0001c0001t0019 a0001c0002t0004 a0002c0003t0005 others(1): Show a0001c0001t0019 a0001c0002t0004 a0002c0003t0005 a0002c0004t0012	a0001c0001t0019g0014 a0001c0002t0004g0002 a0002c0003t0005g0017 others(1): Show a0001c0001t0019g0014 a0001c0002t0004g0002 a0002c0003t0005g0017 a0002c0004t0012g0020	4	60	0.0667	14	c.-33 others(35): Show c.-333+90124_-333+90137dupAAAAAAAAAAAAAA	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	3/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22425156	T T	TATATATA others(7): Show TATATATATATAAAA	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00639.hp2 HG01070.hp2 others(8): Show HG00558.hp1 HG00639.hp2 HG01070.hp2 HG02258.hp1 HG02258.hp2 HG02572.hp1 HG03195.hp1 HG03486.hp2 HG03579.hp2 NA18906.hp1 NA19002.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0002c0004	a0001c0001t0001 a0001c0001t0014 a0001c0002t0003 others(8): Show a0001c0001t0001 a0001c0001t0014 a0001c0002t0003 a0001c0002t0004 a0001c0002t0007 a0001c0002t0015 a0001c0002t0024 a0002c0003t0001 a0002c0003t0002 a0002c0004t0003 a0002c0004t0004	a0001c0001t0001g0042 a0001c0001t0014g0055 a0001c0002t0003g0022 others(8): Show a0001c0001t0001g0042 a0001c0001t0014g0055 a0001c0002t0003g0022 a0001c0002t0004g0008 a0001c0002t0007g0001 a0001c0002t0015g0032 a0001c0002t0024g0007 a0002c0003t0001g0026 a0002c0003t0002g0015 a0002c0004t0003g0016 a0002c0004t0004g0033	11	60	0.1833	14	c.-42 others(35): Show c.-427-19806_-427-19805insTTTTATATATATAT	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	2/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22425156	T T	TATATATA others(7): Show TATATATATATATAA	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG03209.hp2 HG02572.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0003 a0001c0001t0002 a0001c0002t0003	a0001c0001t0002g0021 a0001c0002t0003g0052 a0001c0001t0002g0021 a0001c0002t0003g0052	2	60	0.0333	14	c.-42 others(35): Show c.-427-19806_-427-19805insTTATATATATATAT	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	2/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22435498	A A	ATATGTGT others(7): Show ATATGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG01358.hp1	a0006 a0006	a0006c0009 a0006c0009	a0006c0009t0001 a0006c0009t0001	a0006c0009t0001g0006 a0006c0009t0001g0006	1	60	0.0167	14	c.-42 others(35): Show c.-427-30148_-427-30147insCACACACACACATA	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	2/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22460713	A A	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0024 a0001c0002t0024	a0001c0002t0024g0007 a0001c0002t0024g0007	1	60	0.0167	14	c.-42 others(35): Show c.-428+44543_-428+44556dupAAAAAAAAAAAAAA	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	2/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22483748	C C	CTATATAT others(7): Show CTATATATATATATA	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG03225.hp2 HG02572.hp2 HG03225.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0010 a0001c0001 a0005c0010	a0001c0001t0002 a0005c0010t0001 a0001c0001t0002 a0005c0010t0001	a0001c0001t0002g0021 a0005c0010t0001g0004 a0001c0001t0002g0021 a0005c0010t0001g0004	2	60	0.0333	14	c.-42 others(35): Show c.-428+21508_-428+21521dupTATATATATATATA	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	2/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22489056	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG01070.hp1 NA19002.hp1 HG00558.hp1 HG01070.hp1 NA19002.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0018 a0001c0002t0007 a0001c0002t0011 a0001c0001t0018 a0001c0002t0007 a0001c0002t0011	a0001c0001t0018g0010 a0001c0002t0007g0001 a0001c0002t0011g0009 a0001c0001t0018g0010 a0001c0002t0007g0001 a0001c0002t0011g0009	3	60	0.0500	14	c.-42 others(35): Show c.-428+16200_-428+16213dupAAAAAAAAAAAAAA	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	2/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22493480	G G	GATATGCA others(7): Show GATATGCATAGATGC	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02647.hp2 HG02809.hp1 HG02559.hp2 HG02647.hp2 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0023 a0001c0001t0002 a0001c0002t0023	a0001c0001t0002g0028 a0001c0001t0002g0035 a0001c0002t0023g0046 a0001c0001t0002g0028 a0001c0001t0002g0035 a0001c0002t0023g0046	3	60	0.0500	14	c.-42 others(35): Show c.-428+11789_-428+11790insGCATCTATGCATAT	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	2/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22532350	G G	GATATATA others(7): Show GATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0045 a0001c0001t0016g0045	1	60	0.0167	14	c.-52 others(35): Show c.-522-27000_-522-26987dupATATATATATATAT	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	1/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22675870	C C	CATATATA others(7): Show CATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0026 a0002c0003t0001g0026	1	60	0.0167	14	c.-52 others(37): Show c.-522-170520_-522-170507dupATATATATATATAT	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	1/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22705116	C C	CATATATA others(7): Show CATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01070.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0010 a0001c0001t0018g0010	1	60	0.0167	14	c.-52 others(37): Show c.-523+147928_-523+147941dupATATATATATATAT	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	1/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22705130	T T	TATATATA others(7): Show TATATATACACACAC	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp2 HG02280.hp1 HG02280.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0013 a0001c0001 a0002c0013	a0001c0001t0010 a0002c0013t0002 a0001c0001t0010 a0002c0013t0002	a0001c0001t0010g0012 a0002c0013t0002g0034 a0001c0001t0010g0012 a0002c0013t0002g0034	2	60	0.0333	14	c.-52 others(37): Show c.-523+147927_-523+147928insGTGTGTGTATATAT	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	1/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22705499	G G	GCACACAC others(7): Show GCACACACACACACA	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG02809.hp2 HG03130.hp2 HG01358.hp1 HG02809.hp2 HG03130.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0009 a0001c0001 a0006c0009	a0001c0001t0001 a0001c0001t0002 a0006c0009t0001 a0001c0001t0001 a0001c0001t0002 a0006c0009t0001	a0001c0001t0001g0050 a0001c0001t0002g0051 a0006c0009t0001g0006 a0001c0001t0001g0050 a0001c0001t0002g0051 a0006c0009t0001g0006	3	60	0.0500	14	c.-52 others(37): Show c.-523+147545_-523+147558dupTGTGTGTGTGTGTG	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	1/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22836223	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0002 a0001c0002t0004g0002	1	60	0.0167	14	c.-52 others(35): Show c.-523+16821_-523+16834dupAAAAAAAAAAAAAA	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	1/14			chr5	TogoVar
CDH13_chr16_82621969_83805640	82627337	C C	CGTGCGTG others(7): Show CGTGCGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0037 a0001c0001t0037	a0001c0001t0037g0022 a0001c0001t0037g0022	1	110	0.0091	14	c.45+ others(27): Show c.45+203_45+204insCGTGTGTGTGTGTG	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	82637428	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0033 a0001c0001t0033	a0001c0001t0033g0049 a0001c0001t0033g0049	1	110	0.0091	14	c.45+ others(31): Show c.45+10298_45+10311dupTTTTTTTTTTTTTT	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	82689982	T T	TAAAAAAA others(7): Show TAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0015 a0001c0008t0015	a0001c0008t0015g0048 a0001c0008t0015g0048	1	110	0.0091	14	c.45+ others(31): Show c.45+62868_45+62881dupAAAAAAAAAAAAAA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	82701926	A A	ATGGGTGG others(7): Show ATGGGTGGGTGCAGT	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG03471.hp2 HG02717.hp1 HG03471.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0010 a0001c0002t0013 a0001c0002t0010 a0001c0002t0013	a0001c0002t0010g0036 a0001c0002t0013g0092 a0001c0002t0010g0036 a0001c0002t0013g0092	2	110	0.0182	14	c.45+ others(31): Show c.45+74791_45+74804dupGGGTGGGTGCAGTT	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	82710550	A A	AATATATA others(7): Show AATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00438.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0030 a0001c0002t0001g0030	1	110	0.0091	14	c.45+ others(31): Show c.45+83414_45+83415insTATATATATATATA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	82761017	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01168.hp1 HG01255.hp2 others(7): Show HG00438.hp1 HG01168.hp1 HG01255.hp2 HG01258.hp2 HG01261.hp1 HG01884.hp1 HG02258.hp2 HG03669.hp1 NA18522.hp2 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0002c0012	a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 others(6): Show a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0002t0001 a0001c0002t0006 a0001c0002t0038 a0001c0003t0032 a0001c0004t0042 a0002c0012t0002	a0001c0001t0023g0021 a0001c0001t0024g0018 a0001c0001t0025g0071 others(7): Show a0001c0001t0023g0021 a0001c0001t0024g0018 a0001c0001t0025g0071 a0001c0002t0001g0097 a0001c0002t0001g0098 a0001c0002t0006g0037 a0001c0002t0038g0023 a0001c0003t0032g0060 a0001c0004t0042g0061 a0002c0012t0002g0019	10	110	0.0909	14	c.46- others(31): Show c.46-97329_46-97316dupTTTTTTTTTTTTTT	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	82804297	A A	ACACACAC others(7): Show ACACACACACACATG	intron_variant intron_variant	MODIFIER	HG02698.hp2 HG03239.hp1 HG03239.hp2 others(1): Show HG02698.hp2 HG03239.hp1 HG03239.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 a0001c0001 a0001c0003 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0003t0043 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0003t0043 a0001c0004t0016	a0001c0001t0001g0095 a0001c0001t0002g0007 a0001c0003t0043g0094 others(1): Show a0001c0001t0001g0095 a0001c0001t0002g0007 a0001c0003t0043g0094 a0001c0004t0016g0056	4	110	0.0364	14	c.46- others(31): Show c.46-54053_46-54052insTGCACACACACACA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	82804312	C C	CACACACA others(7): Show CACACACACACACAT	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01175.hp1 HG01167.hp1 HG01175.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0012 a0001c0002t0012	a0001c0002t0012g0044 a0001c0002t0012g0105 a0001c0002t0012g0044 a0001c0002t0012g0105	2	110	0.0182	14	c.46- others(31): Show c.46-54050_46-54049insACACACACACACAT	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	1/13			chr16	TogoVar
CDH13_chr16_82621969_83805640	82834548	A A	ACCCACAG others(7): Show ACCCACAGCCCACAG	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01081.hp2 HG02895.hp2 others(5): Show HG00738.hp2 HG01081.hp2 HG02895.hp2 HG02897.hp1 HG02922.hp1 HG03453.hp2 HG03471.hp1 HG03579.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0004 others(2): Show a0001c0001 a0001c0002 a0001c0004 a0001c0007 a0002c0009	a0001c0001t0001 a0001c0001t0008 a0001c0002t0006 others(4): Show a0001c0001t0001 a0001c0001t0008 a0001c0002t0006 a0001c0002t0009 a0001c0004t0003 a0001c0007t0004 a0002c0009t0002	a0001c0001t0001g0053 a0001c0001t0001g0108 a0001c0001t0008g0066 others(5): Show a0001c0001t0001g0053 a0001c0001t0001g0108 a0001c0001t0008g0066 a0001c0002t0006g0027 a0001c0002t0009g0075 a0001c0004t0003g0058 a0001c0007t0004g0107 a0002c0009t0002g0050	8	110	0.0727	14	c.46- others(31): Show c.46-23797_46-23784dupCACAGCCCACAGCC	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	82877924	G G	GACACACA others(7): Show GACACACACACACAC	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0014 a0001c0014	a0001c0014t0046 a0001c0014t0046	a0001c0014t0046g0013 a0001c0014t0046g0013	1	110	0.0091	14	c.157 others(33): Show c.157+19475_157+19488dupCACACACACACACA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	82889300	A A	ATCTCTCT others(7): Show ATCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0110 a0001c0003t0004g0110	1	110	0.0091	14	c.157 others(33): Show c.157+30837_157+30850dupCTCTCTCTCTCTCT	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	82896276	A A	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG03516.hp2 HG01168.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0008 a0001c0001t0003 a0001c0001t0008	a0001c0001t0003g0085 a0001c0001t0008g0052 a0001c0001t0003g0085 a0001c0001t0008g0052	2	110	0.0182	14	c.157 others(33): Show c.157+37823_157+37836dupTTTTTTTTTTTTTT	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	82909252	A A	ATGTGTGT others(7): Show ATGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01258.hp1 HG02717.hp2 HG03486.hp1 HG01258.hp1 HG02717.hp2 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0037 a0001c0001t0002 a0001c0001t0037	a0001c0001t0002g0016 a0001c0001t0002g0089 a0001c0001t0037g0022 a0001c0001t0002g0016 a0001c0001t0002g0089 a0001c0001t0037g0022	3	110	0.0273	14	c.157 others(33): Show c.157+50807_157+50820dupGTGTGTGTGTGTGT	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	82947004	C C	CTGTGTGT others(7): Show CTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG02027.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0029 a0001c0001t0001g0029	1	110	0.0091	14	c.158 others(33): Show c.158-84975_158-84962dupTGTGTGTGTGTGTG	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83015673	G G	GTGTATGT others(7): Show GTGTATGTATATATA	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02630.hp2 HG02451.hp1 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0011 a0001c0001 a0001c0011	a0001c0001t0001 a0001c0011t0035 a0001c0001t0001 a0001c0011t0035	a0001c0001t0001g0087 a0001c0011t0035g0074 a0001c0001t0001g0087 a0001c0011t0035g0074	2	110	0.0182	14	c.158 others(33): Show c.158-16336_158-16335insGTATGTATATATAT	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83015677	G G	GTATATAT others(7): Show GTATATATATATATA	intron_variant intron_variant	MODIFIER	HG03669.hp2 HG03669.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0104 a0001c0001t0001g0104	1	110	0.0091	14	c.158 others(33): Show c.158-16300_158-16287dupTATATATATATATA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83121962	T T	TCACACAC others(7): Show TCACACACACACACA	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0013 a0001c0002t0013	a0001c0002t0013g0092 a0001c0002t0013g0092	1	110	0.0091	14	c.367 others(31): Show c.367-3403_367-3390dupACACACACACACAC	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83134544	G G	GGAGAGAG others(7): Show GGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG00597.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0043 a0001c0002t0002g0043	1	110	0.0091	14	c.483 others(31): Show c.483+9079_483+9092dupAGAGAGAGAGAGAG	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	4/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83167499	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG03579.hp2 HG01884.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0026 a0001c0001t0008 a0001c0001t0026	a0001c0001t0008g0066 a0001c0001t0026g0070 a0001c0001t0008g0066 a0001c0001t0026g0070	2	110	0.0182	14	c.483 others(33): Show c.483+42007_483+42020dupAAAAAAAAAAAAAA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	4/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83179481	T T	TAAAAAAA others(7): Show TAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00323.hp2	a0004 a0004	a0004c0013 a0004c0013	a0004c0013t0044 a0004c0013t0044	a0004c0013t0044g0001 a0004c0013t0044g0001	1	110	0.0091	14	c.484 others(33): Show c.484-37856_484-37843dupAAAAAAAAAAAAAA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	4/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83215073	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0041 a0001c0002t0041	a0001c0002t0041g0079 a0001c0002t0041g0079	1	110	0.0091	14	c.484 others(31): Show c.484-2264_484-2251dupTTTTTTTTTTTTTT	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	4/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83216397	A A	AATATATA others(7): Show AATATATATATATGT	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG02622.hp1 HG03453.hp2 HG00323.hp2 HG02622.hp1 HG03453.hp2	a0001 a0004 a0001 a0004	a0001c0002 a0004c0013 a0001c0002 a0004c0013	a0001c0002t0006 a0001c0002t0014 a0004c0013t0044 a0001c0002t0006 a0001c0002t0014 a0004c0013t0044	a0001c0002t0006g0027 a0001c0002t0014g0109 a0004c0013t0044g0001 a0001c0002t0006g0027 a0001c0002t0014g0109 a0004c0013t0044g0001	3	110	0.0273	14	c.484 others(29): Show c.484-936_484-935insGTATATATATATAT	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	4/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83216427	T T	TATATATA others(7): Show TATATATATATAAAA	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0071 a0001c0001t0025g0071	1	110	0.0091	14	c.484 others(29): Show c.484-907_484-906insAAAATATATATATA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	4/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83216427	T T	TATATATA others(7): Show TATATATATATATAA	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01169.hp2 HG01255.hp2 others(3): Show HG00639.hp2 HG01169.hp2 HG01255.hp2 HG02451.hp2 HG03041.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004	a0001c0001t0009 a0001c0001t0036 a0001c0002t0007 others(3): Show a0001c0001t0009 a0001c0001t0036 a0001c0002t0007 a0001c0002t0009 a0001c0003t0004 a0001c0004t0042	a0001c0001t0009g0047 a0001c0001t0036g0002 a0001c0002t0007g0100 others(3): Show a0001c0001t0009g0047 a0001c0001t0036g0002 a0001c0002t0007g0100 a0001c0002t0009g0075 a0001c0003t0004g0091 a0001c0004t0042g0061	6	110	0.0546	14	c.484 others(29): Show c.484-905_484-904insAATATATATATATA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	4/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83252107	T T	TACACACA others(7): Show TACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00438.hp1 HG00597.hp2 others(3): Show HG00323.hp1 HG00438.hp1 HG00597.hp2 HG01261.hp2 HG02698.hp2 HG03491.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0010	a0001c0001t0045 a0001c0002t0001 a0001c0002t0002 others(3): Show a0001c0001t0045 a0001c0002t0001 a0001c0002t0002 a0001c0003t0043 a0001c0004t0003 a0001c0010t0003	a0001c0001t0045g0065 a0001c0002t0001g0098 a0001c0002t0002g0043 others(3): Show a0001c0001t0045g0065 a0001c0002t0001g0098 a0001c0002t0002g0043 a0001c0003t0043g0094 a0001c0004t0003g0020 a0001c0010t0003g0062	6	110	0.0546	14	c.636 others(33): Show c.636+34620_636+34633dupCACACACACACACA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	5/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83271422	T T	TTAAAAAA others(7): Show TTAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02647.hp1 HG02922.hp1 others(2): Show HG01255.hp2 HG02647.hp1 HG02922.hp1 HG03098.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0005 others(1): Show a0001c0001 a0001c0004 a0001c0005 a0001c0006	a0001c0001t0001 a0001c0001t0005 a0001c0004t0042 others(2): Show a0001c0001t0001 a0001c0001t0005 a0001c0004t0042 a0001c0005t0047 a0001c0006t0029	a0001c0001t0001g0053 a0001c0001t0005g0106 a0001c0004t0042g0061 others(2): Show a0001c0001t0001g0053 a0001c0001t0005g0106 a0001c0004t0042g0061 a0001c0005t0047g0078 a0001c0006t0029g0051	5	110	0.0455	14	c.636 others(33): Show c.636+53925_636+53926insTAAAAAAAAAAAAA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	5/13			chr16	TogoVar
CDH13_chr16_82621969_83805640	83341989	C C	CCACACAC others(7): Show CCACACACACACACA	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01175.hp1 HG01255.hp2 others(1): Show HG01167.hp1 HG01175.hp1 HG01255.hp2 HG03239.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0002 a0001c0002t0012 a0001c0004t0042 a0001c0001t0002 a0001c0002t0012 a0001c0004t0042	a0001c0001t0002g0007 a0001c0002t0012g0044 a0001c0002t0012g0105 others(1): Show a0001c0001t0002g0007 a0001c0002t0012g0044 a0001c0002t0012g0105 a0001c0004t0042g0061	4	110	0.0364	14	c.637 others(31): Show c.637-2843_637-2830dupACACACACACACAC	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	5/13		INFO_REALIGN_3_PRIME	chr16	TogoVar

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