Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CHST11_chr12_104451948_104767014	104544769	T T	TCCCCCCC others(7): Show TCCCCCCCCCGCGCC	intron_variant intron_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0041 a0001c0001t0003g0041	1	240	0.0042	14	c.119 others(33): Show c.119-57131_119-57130insCCCGCGCCCCCCCC	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST11_chr12_104451948_104767014	104544769	T T	TCCCCCCC others(7): Show TCCCCCCCCGCCCCC	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00597.hp1 HG00738.hp2 others(19): Show HG00423.hp1 HG00597.hp1 HG00738.hp2 HG01168.hp1 HG01168.hp2 HG01255.hp1 HG02109.hp2 HG02451.hp2 HG02818.hp1 HG03704.hp2 HG03710.hp1 HG04184.hp1 HG04204.hp2 NA18522.hp2 NA18941.hp1 NA18948.hp2 NA18961.hp2 NA18964.hp1 NA18966.hp1 NA19000.hp1 NA19000.hp2 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0001t0023 a0001c0001t0026 a0001c0001t0030 a0001c0001t0032 a0001c0001t0035 a0001c0001t0057	a0001c0001t0001g0002 a0001c0001t0001g0020 a0001c0001t0001g0033 others(19): Show a0001c0001t0001g0002 a0001c0001t0001g0020 a0001c0001t0001g0033 a0001c0001t0001g0045 a0001c0001t0001g0048 a0001c0001t0001g0111 a0001c0001t0001g0142 a0001c0001t0001g0156 a0001c0001t0002g0096 a0001c0001t0003g0027 a0001c0001t0003g0036 a0001c0001t0003g0070 a0001c0001t0003g0230 a0001c0001t0004g0029 a0001c0001t0004g0106 a0001c0001t0008g0163 a0001c0001t0023g0190 a0001c0001t0026g0047 a0001c0001t0030g0032 a0001c0001t0032g0120 a0001c0001t0035g0171 a0001c0001t0057g0209	22	240	0.0917	14	c.119 others(33): Show c.119-57131_119-57130insCCGCCCCCCCCCCC	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST11_chr12_104451948_104767014	104553568	C C	CGAGAGAG others(7): Show CGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02895.hp1 HG02922.hp2 others(6): Show HG02145.hp1 HG02895.hp1 HG02922.hp2 HG02965.hp1 HG02976.hp1 HG03195.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0015 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0015 a0001c0001t0022 a0001c0001t0023 a0001c0001t0029 a0001c0001t0053 a0001c0001t0055	a0001c0001t0001g0122 a0001c0001t0001g0213 a0001c0001t0002g0199 others(6): Show a0001c0001t0001g0122 a0001c0001t0001g0213 a0001c0001t0002g0199 a0001c0001t0015g0061 a0001c0001t0022g0185 a0001c0001t0023g0196 a0001c0001t0029g0005 a0001c0001t0053g0057 a0001c0001t0055g0219	9	240	0.0375	14	c.119 others(33): Show c.119-48318_119-48305dupAGAGAGAGAGAGAG	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST11_chr12_104451948_104767014	104686232	T T	TAAAAAAA others(7): Show TAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG03516.hp1 HG03942.hp1 others(1): Show HG02559.hp1 HG03516.hp1 HG03942.hp1 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0063 a0001c0001t0068 a0001c0001t0003 a0001c0001t0063 a0001c0001t0068	a0001c0001t0003g0030 a0001c0001t0003g0216 a0001c0001t0063g0058 others(1): Show a0001c0001t0003g0030 a0001c0001t0003g0216 a0001c0001t0063g0058 a0001c0001t0068g0059	4	240	0.0167	14	c.205 others(33): Show c.205-70713_205-70700dupAAAAAAAAAAAAAA	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST11_chr12_104451948_104767014	104722155	A A	AGTGTGTG others(7): Show AGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01884.hp2 HG01891.hp1 others(11): Show HG01243.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG02258.hp2 HG02683.hp1 HG02723.hp2 HG02896.hp2 HG02922.hp2 HG02970.hp1 HG03195.hp2 HG03486.hp2 NA18906.hp2 NA19083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0014 a0001c0001t0017 a0001c0001t0018 a0001c0001t0029 a0001c0001t0042 a0001c0001t0043 a0001c0001t0045 a0001c0001t0053 a0001c0001t0070	a0001c0001t0001g0118 a0001c0001t0001g0211 a0001c0001t0002g0206 others(11): Show a0001c0001t0001g0118 a0001c0001t0001g0211 a0001c0001t0002g0206 a0001c0001t0003g0227 a0001c0001t0014g0176 a0001c0001t0017g0015 a0001c0001t0017g0065 a0001c0001t0018g0205 a0001c0001t0029g0005 a0001c0001t0042g0194 a0001c0001t0043g0187 a0001c0001t0045g0189 a0001c0001t0053g0057 a0001c0001t0070g0172	14	240	0.0583	14	c.205 others(33): Show c.205-34773_205-34760dupGTGTGTGTGTGTGT	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST11_chr12_104451948_104767014	104750428	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02155.hp1 HG02970.hp1 HG03471.hp1 others(3): Show HG02155.hp1 HG02970.hp1 HG03471.hp1 NA19077.hp2 NA19088.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0011 a0001c0001t0024 a0001c0001t0001 a0001c0001t0011 a0001c0001t0024	a0001c0001t0001g0042 a0001c0001t0001g0089 a0001c0001t0001g0211 others(3): Show a0001c0001t0001g0042 a0001c0001t0001g0089 a0001c0001t0001g0211 a0001c0001t0001g0234 a0001c0001t0011g0203 a0001c0001t0024g0182	6	240	0.0250	14	c.205 others(31): Show c.205-6506_205-6493dupTTTTTTTTTTTTTT	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST11_chr12_104451948_104767014	104756532	G G	GGGGTGTG others(7): Show GGGGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00423.hp1 HG02040.hp2 others(6): Show HG00408.hp2 HG00423.hp1 HG02040.hp2 HG03453.hp1 NA18986.hp1 NA18993.hp1 NA19057.hp1 NA19081.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0011 a0001c0001t0024 others(3): Show a0001c0001t0010 a0001c0001t0011 a0001c0001t0024 a0001c0001t0030 a0001c0001t0031 a0001c0001t0066	a0001c0001t0010g0012 a0001c0001t0010g0014 a0001c0001t0010g0123 others(6): Show a0001c0001t0010g0012 a0001c0001t0010g0014 a0001c0001t0010g0123 a0001c0001t0011g0105 a0001c0001t0024g0195 a0001c0001t0030g0032 a0001c0001t0031g0010 a0001c0001t0031g0013 a0001c0001t0066g0053	9	240	0.0375	14	c.205 others(29): Show c.205-416_205-415insGGTGTGTGTGTGTG	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST11_chr12_104451948_104767014	104756532	G G	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00558.hp2 HG01071.hp1 others(11): Show HG00140.hp2 HG00558.hp2 HG01071.hp1 HG01081.hp2 HG02074.hp1 HG02145.hp1 HG02155.hp2 HG02559.hp2 HG02895.hp1 HG02970.hp2 HG03195.hp1 HG03654.hp2 HG03710.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0021 a0001c0001t0030 a0001c0001t0035 a0001c0001t0038 a0001c0001t0044 a0001c0001t0055 a0001c0001t0056 a0001c0001t0061	a0001c0001t0001g0122 a0001c0001t0001g0213 a0001c0001t0002g0064 others(11): Show a0001c0001t0001g0122 a0001c0001t0001g0213 a0001c0001t0002g0064 a0001c0001t0007g0095 a0001c0001t0007g0153 a0001c0001t0021g0183 a0001c0001t0030g0110 a0001c0001t0035g0161 a0001c0001t0035g0171 a0001c0001t0038g0068 a0001c0001t0044g0184 a0001c0001t0055g0219 a0001c0001t0056g0202 a0001c0001t0061g0091	14	240	0.0583	14	c.205 others(29): Show c.205-400_205-387dupGTGTGTGTGTGTGT	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST11_chr12_104451948_104767014	104761464	T T	TACACACA others(7): Show TACACACACACACAC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00544.hp1 HG01257.hp2 HG01884.hp1 others(11): Show HG00544.hp1 HG01257.hp2 HG01884.hp1 HG03209.hp2 HG03225.hp2 HG03453.hp2 HG03471.hp1 HG03516.hp1 NA18522.hp1 NA18522.hp2 NA18966.hp2 NA19081.hp1 NA19088.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0015 a0001c0001t0024 others(4): Show a0001c0001t0011 a0001c0001t0015 a0001c0001t0024 a0001c0001t0027 a0001c0001t0041 a0001c0001t0057 a0001c0001t0063	a0001c0001t0011g0067 a0001c0001t0011g0097 a0001c0001t0011g0105 others(11): Show a0001c0001t0011g0067 a0001c0001t0011g0097 a0001c0001t0011g0105 a0001c0001t0011g0203 a0001c0001t0015g0061 a0001c0001t0015g0128 a0001c0001t0015g0210 a0001c0001t0024g0182 a0001c0001t0024g0195 a0001c0001t0027g0121 a0001c0001t0027g0201 a0001c0001t0041g0001 a0001c0001t0057g0209 a0001c0001t0063g0058	14	240	0.0583	14	c.36 others(25): Show c.3685_*3698dupCACACACACACACA	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	3/3	3699	INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST12_chr7_2398611_2453484	2432141	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01934.hp1 HG01099.hp2 HG01934.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0094 a0001c0001t0219 a0001c0001t0094 a0001c0001t0219	a0001c0001t0094g0158 a0001c0001t0219g0272 a0001c0001t0094g0158 a0001c0001t0219g0272	2	344	0.0058	14	c.-77 others(29): Show c.-77-399_-77-386dupAAAAAAAAAAAAAA	CHST12	ENSG00000136213.10	transcript	ENST00000618655.2	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHST12_chr7_2398611_2453484	2434579	T T	TAAAAAAA others(7): Show TAAAAAAAAAAAAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02148.hp1 NA18747.hp2 HG02148.hp1 NA18747.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0036 a0003c0003t0035 a0001c0001t0036 a0003c0003t0035	a0001c0001t0036g0015 a0003c0003t0035g0153 a0001c0001t0036g0015 a0003c0003t0035g0153	2	344	0.0058	14	c.71 others(23): Show c.719_*732dupAAAAAAAAAAAAAA	CHST12	ENSG00000136213.10	transcript	ENST00000618655.2	protein_coding	2/2	733	INFO_REALIGN_3_PRIME	chr7	TogoVar
CHST13_chr3_126519155_126548291	126523553	A A	AACACACA others(7): Show AACACACACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG02559.hp1 NA19062.hp2 HG01243.hp2 HG02559.hp1 NA19062.hp2	a0002 a0003 a0002 a0003	a0002c0002 a0003c0004 a0003c0005 a0002c0002 a0003c0004 a0003c0005	a0002c0002t0001 a0003c0004t0001 a0003c0005t0001 a0002c0002t0001 a0003c0004t0001 a0003c0005t0001	a0002c0002t0001g0002 a0003c0004t0001g0016 a0003c0005t0001g0017 a0002c0002t0001g0002 a0003c0004t0001g0016 a0003c0005t0001g0017	3	364	0.0082	14	c.-78 others(23): Show c.-780_-779insACACACACACACAC	CHST13	ENSG00000180767.11	transcript	ENST00000319340.7	protein_coding		601		chr3	TogoVar
CHST15_chr10_124002668_124098598	124045112	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02083.hp1 NA18612.hp1 HG02083.hp1 NA18612.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0036 a0001c0001t0001g0127 a0001c0001t0001g0036 a0001c0001t0001g0127	2	392	0.0051	14	c.547 others(29): Show c.547-207_547-194dupTTTTTTTTTTTTTT	CHST15	ENSG00000182022.18	transcript	ENST00000435907.6	protein_coding	2/7			chr10	TogoVar
CHST1_chr11_45642689_45670622	45659862	C C	CTCTCTGC others(7): Show CTCTCTGCCCAGTTG	intron_variant intron_variant	MODIFIER	NA19055.hp2 NA19055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0111 a0001c0001t0001g0111	1	386	0.0026	14	c.-22 others(33): Show c.-227+5302_-227+5315dupCAACTGGGCAGAGA	CHST1	ENSG00000175264.8	transcript	ENST00000308064.7	protein_coding	1/3			chr11	TogoVar
CHST5_chr16_75523530_75541108	75526241	G G	GCATGTGA others(7): Show GCATGTGAGTGTGCA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19068.hp2 NA19068.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0015 a0001c0001t0001g0015	1	394	0.0025	14	c.29 others(25): Show c.2907_*2908insTGCACACTCACATG	CHST5	ENSG00000135702.15	transcript	ENST00000336257.8	protein_coding		2288		chr16	TogoVar
CHST6_chr16_75467052_75500441	75491176	A A	AATATATA others(7): Show AATATATATATATAT	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0200 a0001c0001t0020g0200	1	371	0.0027	14	c.-92 others(31): Show c.-92+3763_-92+3764insATATATATATATAT	CHST6	ENSG00000183196.10	transcript	ENST00000332272.9	protein_coding	1/2			chr16	TogoVar
CHST6_chr16_75467052_75500441	75491190	A A	AAAAAATA others(7): Show AAAAAATATATATAT	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG03041.hp1 HG01257.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0016 a0001c0004t0022 a0001c0001t0016 a0001c0004t0022	a0001c0001t0016g0054 a0001c0004t0022g0053 a0001c0001t0016g0054 a0001c0004t0022g0053	2	371	0.0054	14	c.-92 others(31): Show c.-92+3749_-92+3750insATATATATATTTTT	CHST6	ENSG00000183196.10	transcript	ENST00000332272.9	protein_coding	1/2			chr16	TogoVar
CHST6_chr16_75467052_75500441	75491190	A A	AAAATATA others(7): Show AAAATATATATATAT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG03225.hp2 HG03486.hp2 HG01243.hp2 HG03225.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0005 a0001c0001t0011 a0001c0001t0003 a0001c0001t0005 a0001c0001t0011	a0001c0001t0003g0045 a0001c0001t0005g0067 a0001c0001t0011g0046 a0001c0001t0003g0045 a0001c0001t0005g0067 a0001c0001t0011g0046	3	371	0.0081	14	c.-92 others(31): Show c.-92+3749_-92+3750insATATATATATATTT	CHST6	ENSG00000183196.10	transcript	ENST00000332272.9	protein_coding	1/2			chr16	TogoVar
CHST8_chr19_33616953_33778506	33618621	C C	CTCTTCTC others(7): Show CTCTTCTCTTCTTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0012	1	254	0.0039	14	c.-38 others(25): Show c.-3839_-3838insTCTTCTCTTCTTCT	CHST8	ENSG00000124302.13	transcript	ENST00000650847.1	protein_coding		3331		chr19	TogoVar
CHST8_chr19_33616953_33778506	33657156	C C	CACACACA others(7): Show CACACACACACACAA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0229 a0001c0001t0001g0229	1	254	0.0039	14	c.-16 others(35): Show c.-163-10610_-163-10609insCACACACACACAAA	CHST8	ENSG00000124302.13	transcript	ENST00000650847.1	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr19	TogoVar
CHST8_chr19_33616953_33778506	33694093	C C	CATATATA others(7): Show CATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG03491.hp1 HG04199.hp1 others(2): Show HG01496.hp2 HG03491.hp1 HG04199.hp1 NA18990.hp1 NA19002.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0007 a0001c0001 a0005c0007	a0001c0001t0001 a0001c0001t0011 a0005c0007t0001 a0001c0001t0001 a0001c0001t0011 a0005c0007t0001	a0001c0001t0001g0114 a0001c0001t0001g0202 a0001c0001t0001g0224 others(2): Show a0001c0001t0001g0114 a0001c0001t0001g0202 a0001c0001t0001g0224 a0001c0001t0011g0004 a0005c0007t0001g0227	5	254	0.0197	14	c.130 others(31): Show c.130+4726_130+4739dupTATATATATATATA	CHST8	ENSG00000124302.13	transcript	ENST00000650847.1	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr19	TogoVar
CHST8_chr19_33616953_33778506	33723362	G G	GCACGCGT others(7): Show GCACGCGTGTGTCTA	intron_variant intron_variant	MODIFIER	HG02083.hp2 HG02083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0050 a0001c0001t0002g0050	1	254	0.0039	14	c.130 others(33): Show c.130+33975_130+33988dupGCGTGTGTCTACAC	CHST8	ENSG00000124302.13	transcript	ENST00000650847.1	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr19	TogoVar
CHST8_chr19_33616953_33778506	33757522	G G	GAAAGAAA others(7): Show GAAAGAAAGAAAGAA	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0205 a0001c0001t0001g0205	1	254	0.0039	14	c.131 others(33): Show c.131-13890_131-13889insAAGAAAGAAAGAAA	CHST8	ENSG00000124302.13	transcript	ENST00000650847.1	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr19	TogoVar
CHST8_chr19_33616953_33778506	33757522	G G	GAGAGAGA others(7): Show GAGAGAGAGAGAGAA	intron_variant intron_variant	MODIFIER	NA19002.hp1 NA19002.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0075 a0001c0001t0001g0075	1	254	0.0039	14	c.131 others(33): Show c.131-13888_131-13887insGAGAGAGAGAAAGA	CHST8	ENSG00000124302.13	transcript	ENST00000650847.1	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr19	TogoVar
CHST8_chr19_33616953_33778506	33765053	C C	CATATATA others(7): Show CATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0208 a0001c0001t0001g0208	1	254	0.0039	14	c.131 others(31): Show c.131-6353_131-6340dupATATATATATATAT	CHST8	ENSG00000124302.13	transcript	ENST00000650847.1	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr19	TogoVar
CHST9_chr18_26901481_27190308	26969376	C C	CTGTGTGT others(7): Show CTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0032 a0001c0001t0007g0032	1	262	0.0038	14	c.203 others(33): Show c.203-25024_203-25011dupCACACACACACACA	CHST9	ENSG00000154080.14	transcript	ENST00000618847.5	protein_coding	4/5			chr18	TogoVar
CHST9_chr18_26901481_27190308	27015323	T T	TTGTGTGT others(7): Show TTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01243.hp2 HG02258.hp2 others(2): Show HG01081.hp1 HG01243.hp2 HG02258.hp2 HG02630.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0007 a0001c0001t0009 others(2): Show a0001c0001t0004 a0001c0001t0007 a0001c0001t0009 a0001c0001t0017 a0001c0001t0025	a0001c0001t0004g0095 a0001c0001t0007g0032 a0001c0001t0009g0151 others(2): Show a0001c0001t0004g0095 a0001c0001t0007g0032 a0001c0001t0009g0151 a0001c0001t0017g0090 a0001c0001t0025g0027	5	262	0.0191	14	c.202 others(31): Show c.202+8779_202+8792dupCACACACACACACA	CHST9	ENSG00000154080.14	transcript	ENST00000618847.5	protein_coding	4/5			chr18	TogoVar
CHST9_chr18_26901481_27190308	27047388	T T	TTGTGTGT others(7): Show TTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG00741.hp2 HG01074.hp1 others(16): Show HG00673.hp2 HG00741.hp2 HG01074.hp1 HG01106.hp1 HG01167.hp1 HG01192.hp2 HG01891.hp1 HG01943.hp2 HG01993.hp2 HG02040.hp2 HG02135.hp1 HG02145.hp1 HG02165.hp2 HG03225.hp1 HG03239.hp2 HG03492.hp1 NA18952.hp2 NA18956.hp2 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 others(12): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0017 a0001c0001t0020 a0001c0001t0028 a0001c0001t0037 a0001c0001t0045 a0001c0001t0062 a0001c0001t0084 a0002c0003t0054	a0001c0001t0002g0051 a0001c0001t0002g0114 a0001c0001t0002g0124 others(16): Show a0001c0001t0002g0051 a0001c0001t0002g0114 a0001c0001t0002g0124 a0001c0001t0002g0246 a0001c0001t0003g0156 a0001c0001t0006g0176 a0001c0001t0006g0177 a0001c0001t0007g0122 a0001c0001t0008g0206 a0001c0001t0009g0250 a0001c0001t0011g0152 a0001c0001t0017g0213 a0001c0001t0020g0137 a0001c0001t0028g0087 a0001c0001t0037g0186 a0001c0001t0045g0175 a0001c0001t0062g0125 a0001c0001t0084g0212 a0002c0003t0054g0112	19	262	0.0725	14	c.160 others(31): Show c.160+1063_160+1076dupCACACACACACACA	CHST9	ENSG00000154080.14	transcript	ENST00000618847.5	protein_coding	3/5			chr18	TogoVar
CHST9_chr18_26901481_27190308	27053195	A A	AGGAGGAA others(7): Show AGGAGGAAGAGGAAG	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0034 a0001c0001t0005g0034	1	262	0.0038	14	c.122 others(31): Show c.122-4693_122-4692insCTTCCTCTTCCTCC	CHST9	ENSG00000154080.14	transcript	ENST00000618847.5	protein_coding	2/5			chr18	TogoVar
CHST9_chr18_26901481_27190308	27112597	G G	GTGTGTGT others(7): Show GTGTGTGTGTGTGTT	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03225.hp1 NA19240.hp1 others(1): Show HG03041.hp1 HG03225.hp1 NA19240.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0017 a0001c0001t0023 others(1): Show a0001c0001t0005 a0001c0001t0017 a0001c0001t0023 a0001c0001t0039	a0001c0001t0005g0034 a0001c0001t0017g0213 a0001c0001t0023g0214 others(1): Show a0001c0001t0005g0034 a0001c0001t0017g0213 a0001c0001t0023g0214 a0001c0001t0039g0085	4	262	0.0153	14	c.121 others(33): Show c.121+30091_121+30092insAACACACACACACA	CHST9	ENSG00000154080.14	transcript	ENST00000618847.5	protein_coding	2/5			chr18	TogoVar
CHST9_chr18_26901481_27190308	27141591	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19057.hp1 NA19057.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0088 a0001c0001t0088	a0001c0001t0088g0211 a0001c0001t0088g0211	1	262	0.0038	14	c.121 others(31): Show c.121+1084_121+1097dupTTTTTTTTTTTTTT	CHST9	ENSG00000154080.14	transcript	ENST00000618847.5	protein_coding	2/5			chr18	TogoVar
CHSY1_chr15_101170727_101257048	101252386	G G	GCCGGCCC others(7): Show GCCGGCCCCGCGCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0019 a0001c0019	a0001c0019t0008 a0001c0019t0008	a0001c0019t0008g0076 a0001c0019t0008g0076	1	422	0.0024	14	c.-93 others(23): Show c.-931_-930insGAGCGCGGGGCCGG	CHSY1	ENSG00000131873.7	transcript	ENST00000254190.4	protein_coding		339		chr15	TogoVar
CHSY1_chr15_101170727_101257048	101255803	C C	CTGTGTGT others(7): Show CTGTGTGTGTGTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18965.hp1 NA18966.hp2 NA20300.hp2 NA18965.hp1 NA18966.hp2 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0005 a0002c0002t0002 a0001c0001t0005 a0002c0002t0002	a0001c0001t0005g0352 a0002c0002t0002g0108 a0002c0002t0002g0154 a0001c0001t0005g0352 a0002c0002t0002g0108 a0002c0002t0002g0154	3	422	0.0071	14	c.-43 others(25): Show c.-4348_-4347insCACACACACACACA	CHSY1	ENSG00000131873.7	transcript	ENST00000254190.4	protein_coding		3756		chr15	TogoVar
CHSY3_chr5_129899465_130191634	129932103	C C	CATATATA others(7): Show CATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02559.hp2 NA18747.hp2 HG02559.hp2 NA18747.hp2	a0002 a0004 a0002 a0004	a0002c0003 a0004c0009 a0002c0003 a0004c0009	a0002c0003t0002 a0004c0009t0004 a0002c0003t0002 a0004c0009t0004	a0002c0003t0002g0187 a0004c0009t0004g0135 a0002c0003t0002g0187 a0004c0009t0004g0135	2	276	0.0073	14	c.108 others(35): Show c.1086+23770_1086+23783dupATATATATATATAT	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHSY3_chr5_129899465_130191634	130020422	A A	AATATATA others(7): Show AATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0007 a0003c0004t0007	a0003c0004t0007g0254 a0003c0004t0007g0254	1	276	0.0036	14	c.108 others(37): Show c.1086+112089_1086+112102dupATATATATATATAT	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHSY3_chr5_129899465_130191634	130020461	A A	ATATATAT others(7): Show ATATATATATATATT	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG01516.hp2 HG01517.hp1 HG01123.hp2 HG01516.hp2 HG01517.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0006 a0002c0003t0020 a0001c0001t0006 a0002c0003t0020	a0001c0001t0006g0264 a0001c0001t0006g0268 a0002c0003t0020g0263 a0001c0001t0006g0264 a0001c0001t0006g0268 a0002c0003t0020g0263	3	276	0.0109	14	c.108 others(37): Show c.1086+112102_1086+112103insATATATATATATTT	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHSY3_chr5_129899465_130191634	130091146	G G	GCGCGCGC others(7): Show GCGCGCGCACACACA	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0009 a0002c0007t0009	a0002c0007t0009g0125 a0002c0007t0009g0125	1	276	0.0036	14	c.108 others(35): Show c.1087-93082_1087-93081insGCGCGCACACACAC	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHSY3_chr5_129899465_130191634	130128229	G G	GGTGTGTG others(7): Show GGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02896.hp2 HG02897.hp2 others(1): Show HG02280.hp1 HG02896.hp2 HG02897.hp2 NA19030.hp1	a0002 a0002	a0002c0003 a0002c0007 a0002c0003 a0002c0007	a0002c0003t0010 a0002c0007t0009 a0002c0003t0010 a0002c0007t0009	a0002c0003t0010g0250 a0002c0003t0010g0251 a0002c0007t0009g0274 others(1): Show a0002c0003t0010g0250 a0002c0003t0010g0251 a0002c0007t0009g0274 a0002c0007t0009g0275	4	276	0.0145	14	c.108 others(35): Show c.1087-55988_1087-55975dupTGTGTGTGTGTGTG	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHSY3_chr5_129899465_130191634	130128253	T T	TGTGTGTG others(7): Show TGTGTGTGTGTGTGC	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG02451.hp1 NA19079.hp1 HG01496.hp1 HG02451.hp1 NA19079.hp1	a0002 a0005 a0002 a0005	a0002c0007 a0005c0010 a0002c0007 a0005c0010	a0002c0007t0008 a0005c0010t0003 a0002c0007t0008 a0005c0010t0003	a0002c0007t0008g0243 a0002c0007t0008g0244 a0005c0010t0003g0065 a0002c0007t0008g0243 a0002c0007t0008g0244 a0005c0010t0003g0065	3	276	0.0109	14	c.108 others(35): Show c.1087-55975_1087-55974insTGTGTGTGTGTGCG	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHSY3_chr5_129899465_130191634	130143730	G G	GTATATAT others(7): Show GTATATATATATATA	intron_variant intron_variant	MODIFIER	HG01952.hp1 HG01978.hp2 HG02148.hp2 others(3): Show HG01952.hp1 HG01978.hp2 HG02148.hp2 HG02615.hp1 HG02723.hp2 HG03098.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0002 a0003c0006 others(1): Show a0001c0001 a0001c0002 a0003c0006 a0004c0009	a0001c0001t0013 a0001c0002t0001 a0003c0006t0003 others(1): Show a0001c0001t0013 a0001c0002t0001 a0003c0006t0003 a0004c0009t0004	a0001c0001t0013g0241 a0001c0002t0001g0107 a0001c0002t0001g0108 others(3): Show a0001c0001t0013g0241 a0001c0002t0001g0107 a0001c0002t0001g0108 a0003c0006t0003g0038 a0004c0009t0004g0139 a0004c0009t0004g0142	6	276	0.0217	14	c.108 others(35): Show c.1087-40498_1087-40497insATATATATATATAT	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHSY3_chr5_129899465_130191634	130143732	G G	GTATATAT others(7): Show GTATATATATATATA	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0006 a0006	a0006c0011 a0006c0011	a0006c0011t0008 a0006c0011t0008	a0006c0011t0008g0134 a0006c0011t0008g0134	1	276	0.0036	14	c.108 others(35): Show c.1087-40496_1087-40495insATATATATATATAT	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHSY3_chr5_129899465_130191634	130143734	G G	GTGTATAT others(7): Show GTGTATATATATATA	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG01516.hp2 HG01517.hp1 others(1): Show HG01123.hp2 HG01516.hp2 HG01517.hp1 HG02145.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0006 a0002c0003t0020 a0001c0001t0006 a0002c0003t0020	a0001c0001t0006g0264 a0001c0001t0006g0267 a0001c0001t0006g0268 others(1): Show a0001c0001t0006g0264 a0001c0001t0006g0267 a0001c0001t0006g0268 a0002c0003t0020g0263	4	276	0.0145	14	c.108 others(35): Show c.1087-40494_1087-40493insGTATATATATATAT	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHSY3_chr5_129899465_130191634	130143756	A A	ATATATAT others(7): Show ATATATATATATGTG	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG03139.hp2 HG02818.hp2 HG03139.hp2	a0002 a0003 a0002 a0003	a0002c0003 a0003c0004 a0002c0003 a0003c0004	a0002c0003t0001 a0003c0004t0018 a0002c0003t0001 a0003c0004t0018	a0002c0003t0001g0122 a0003c0004t0018g0130 a0002c0003t0001g0122 a0003c0004t0018g0130	2	276	0.0073	14	c.108 others(35): Show c.1087-40472_1087-40471insATATATATATGTGT	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHSY3_chr5_129899465_130191634	130143792	A A	ATATATAT others(7): Show ATATATATATATGTG	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG03139.hp2 HG02818.hp2 HG03139.hp2	a0002 a0003 a0002 a0003	a0002c0003 a0003c0004 a0002c0003 a0003c0004	a0002c0003t0001 a0003c0004t0018 a0002c0003t0001 a0003c0004t0018	a0002c0003t0001g0122 a0003c0004t0018g0130 a0002c0003t0001g0122 a0003c0004t0018g0130	2	276	0.0073	14	c.108 others(35): Show c.1087-40426_1087-40425insGTGTATATATATAT	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHSY3_chr5_129899465_130191634	130143792	A A	ATATATAT others(7): Show ATATATATATGTGTG	intron_variant intron_variant	MODIFIER	NA18939.hp1 NA18939.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0195 a0001c0001t0002g0195	1	276	0.0036	14	c.108 others(35): Show c.1087-40428_1087-40427insGTGTGTATATATAT	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHSY3_chr5_129899465_130191634	130143808	G G	GTATATAT others(7): Show GTATATATATATATA	intron_variant intron_variant	MODIFIER	HG02735.hp2 HG02735.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0222 a0002c0003t0002g0222	1	276	0.0036	14	c.108 others(35): Show c.1087-40420_1087-40419insATATATATATATAT	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHSY3_chr5_129899465_130191634	130163797	A A	ATTTATTT others(7): Show ATTTATTTACTTTCT	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG02451.hp1 HG01496.hp1 HG02451.hp1	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0008 a0002c0007t0008	a0002c0007t0008g0243 a0002c0007t0008g0244 a0002c0007t0008g0243 a0002c0007t0008g0244	2	276	0.0073	14	c.108 others(35): Show c.1087-20432_1087-20431insTTTATTTACTTTCT	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2			chr5	TogoVar
CHSY3_chr5_129899465_130191634	130178253	A A	ATATTTTT others(7): Show ATATTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19060.hp2 NA19060.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0014 a0001c0002t0014	a0001c0002t0014g0024 a0001c0002t0014g0024	1	276	0.0036	14	c.108 others(33): Show c.1087-5975_1087-5974insATTTTTTTTTTTTT	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHTF18_chr16_783620_803074	791642	T T	TTTGTCTG others(7): Show TTTGTCTGCACGAAC	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01261.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0242 a0001c0001t0001g0242	1	428	0.0023	14	c.110 others(31): Show c.1105-206_1105-193dupGTCTGCACGAACTT	CHTF18	ENSG00000127586.17	transcript	ENST00000262315.14	protein_coding	8/21		INFO_REALIGN_3_PRIME	chr16	TogoVar
CHTF18_chr16_783620_803074	795584	G G	GCCCCTCC others(7): Show GCCCCTCCCCTCCAC	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG01346.hp2	a0002 a0002	a0002c0079 a0002c0079	a0002c0079t0001 a0002c0079t0001	a0002c0079t0001g0229 a0002c0079t0001g0229	1	428	0.0023	14	c.217 others(29): Show c.2176-97_2176-96insTCCCCTCCACCCCC	CHTF18	ENSG00000127586.17	transcript	ENST00000262315.14	protein_coding	16/21		INFO_REALIGN_3_PRIME	chr16	TogoVar

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