Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CPSF2_chr14_92116969_92177145	92173330	T T	TATATATA others(7): Show TATATATATACATAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp1 HG00558.hp2 HG01167.hp2 others(5): Show HG00408.hp1 HG00558.hp2 HG01167.hp2 HG03942.hp1 NA18982.hp2 NA18991.hp2 NA18999.hp2 NA19011.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0016 a0001c0001t0053 others(3): Show a0001c0001t0012 a0001c0001t0016 a0001c0001t0053 a0001c0001t0054 a0001c0001t0129 a0001c0001t0131	a0001c0001t0012g0002 a0001c0001t0016g0131 a0001c0001t0016g0132 others(4): Show a0001c0001t0012g0002 a0001c0001t0016g0131 a0001c0001t0016g0132 a0001c0001t0053g0213 a0001c0001t0054g0214 a0001c0001t0129g0215 a0001c0001t0131g0187	8	388	0.0206	14	c.11 others(27): Show c.11586_*11587insATATATATACATAC	CPSF2	ENSG00000165934.13	transcript	ENST00000298875.9	protein_coding		1186		chr14	TogoVar
CPSF2_chr14_92116969_92177145	92173330	T T	TATATATA others(7): Show TATATATATATACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01099.hp1 HG02572.hp1 HG02738.hp2 others(4): Show HG01099.hp1 HG02572.hp1 HG02738.hp2 HG03239.hp2 NA18942.hp2 NA18962.hp2 NA19010.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0023 others(2): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0023 a0001c0001t0038 a0001c0001t0078	a0001c0001t0001g0110 a0001c0001t0001g0141 a0001c0001t0001g0184 others(4): Show a0001c0001t0001g0110 a0001c0001t0001g0141 a0001c0001t0001g0184 a0001c0001t0008g0148 a0001c0001t0023g0003 a0001c0001t0038g0142 a0001c0001t0078g0035	7	388	0.0180	14	c.11 others(27): Show c.11586_*11587insATATATATATACAC	CPSF2	ENSG00000165934.13	transcript	ENST00000298875.9	protein_coding		1186		chr14	TogoVar
CPSF2_chr14_92116969_92177145	92173330	T T	TATATATA others(7): Show TATATATATATATAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02976.hp1 NA18906.hp2 HG02976.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0042 a0001c0001t0084 a0001c0001t0042 a0001c0001t0084	a0001c0001t0042g0252 a0001c0001t0084g0172 a0001c0001t0042g0252 a0001c0001t0084g0172	2	388	0.0052	14	c.11 others(27): Show c.11586_*11587insATATATATATATAC	CPSF2	ENSG00000165934.13	transcript	ENST00000298875.9	protein_coding		1186		chr14	TogoVar
CPSF2_chr14_92116969_92177145	92173370	T T	TGTATATA others(7): Show TGTATATATATATAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00738.hp2 HG02055.hp1 HG02451.hp1 others(3): Show HG00738.hp2 HG02055.hp1 HG02451.hp1 HG02615.hp1 HG02965.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0086 a0001c0001t0087 others(1): Show a0001c0001t0025 a0001c0001t0086 a0001c0001t0087 a0001c0001t0098	a0001c0001t0025g0037 a0001c0001t0025g0175 a0001c0001t0025g0176 others(3): Show a0001c0001t0025g0037 a0001c0001t0025g0175 a0001c0001t0025g0176 a0001c0001t0086g0037 a0001c0001t0087g0177 a0001c0001t0098g0001	6	388	0.0155	14	c.11 others(27): Show c.11626_*11627insGTATATATATATAC	CPSF2	ENSG00000165934.13	transcript	ENST00000298875.9	protein_coding		1226		chr14	TogoVar
CPSF2_chr14_92116969_92177145	92173382	C C	CGTATATA others(7): Show CGTATATATATACGT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0173 a0001c0001t0008g0173	1	388	0.0026	14	c.11 others(27): Show c.11638_*11639insGTATATATATACGT	CPSF2	ENSG00000165934.13	transcript	ENST00000298875.9	protein_coding		1238		chr14	TogoVar
CPSF2_chr14_92116969_92177145	92173382	C C	CGTATATA others(7): Show CGTATATATATATGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp1 HG02055.hp2 HG02717.hp2 others(1): Show HG00408.hp1 HG02055.hp2 HG02717.hp2 NA19011.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0124 a0001c0001t0130 a0001c0001t0012 a0001c0001t0124 a0001c0001t0130	a0001c0001t0012g0002 a0001c0001t0124g0245 a0001c0001t0130g0208 a0001c0001t0012g0002 a0001c0001t0124g0245 a0001c0001t0130g0208	4	388	0.0103	14	c.11 others(27): Show c.11638_*11639insGTATATATATATGT	CPSF2	ENSG00000165934.13	transcript	ENST00000298875.9	protein_coding		1238		chr14	TogoVar
CPSF2_chr14_92116969_92177145	92173385	A A	ATATATAT others(7): Show ATATATATATGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02922.hp1 HG02965.hp1 HG02970.hp1 others(7): Show HG02922.hp1 HG02965.hp1 HG02970.hp1 HG03486.hp1 HG03579.hp1 NA18980.hp2 NA18986.hp2 NA18989.hp2 NA19088.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0006 a0001c0001t0013 others(6): Show a0001c0001t0005 a0001c0001t0006 a0001c0001t0013 a0001c0001t0116 a0001c0001t0117 a0001c0001t0118 a0001c0001t0119 a0001c0001t0120 a0001c0001t0165	a0001c0001t0005g0018 a0001c0001t0006g0018 a0001c0001t0013g0186 others(6): Show a0001c0001t0005g0018 a0001c0001t0006g0018 a0001c0001t0013g0186 a0001c0001t0116g0023 a0001c0001t0117g0023 a0001c0001t0118g0261 a0001c0001t0119g0023 a0001c0001t0120g0260 a0001c0001t0165g0259	10	388	0.0258	14	c.11 others(27): Show c.11641_*11642insTATATATATGTGTG	CPSF2	ENSG00000165934.13	transcript	ENST00000298875.9	protein_coding		1241		chr14	TogoVar
CPSF3_chr2_9418654_9478101	9459638	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0146 a0001c0001t0001g0146	1	230	0.0044	14	c.178 others(29): Show c.1786+35_1786+48dupTTTTTTTTTTTTTT	CPSF3	ENSG00000119203.14	transcript	ENST00000238112.8	protein_coding	15/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
CPSF4_chr7_99433943_99462373	99440655	C C	CGCATATA others(7): Show CGCATATATATATAT	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0111 a0001c0003t0002g0111	1	364	0.0028	14	c.103 others(31): Show c.103+1470_103+1471insGCATATATATATAT	CPSF4	ENSG00000160917.15	transcript	ENST00000292476.10	protein_coding	1/7			chr7	TogoVar
CPSF4_chr7_99433943_99462373	99446771	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0075 a0001c0001t0010g0075	1	364	0.0028	14	c.155 others(31): Show c.155-1326_155-1313dupTTTTTTTTTTTTTT	CPSF4	ENSG00000160917.15	transcript	ENST00000292476.10	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr7	TogoVar
CPSF6_chr12_69234569_69279358	69249152	C C	CGGTGGGG others(7): Show CGGTGGGGGGGGGGG	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG01258.hp1 HG01261.hp2 others(11): Show HG00609.hp2 HG01258.hp1 HG01261.hp2 HG01496.hp2 HG01517.hp1 HG01981.hp1 HG02886.hp1 HG03704.hp1 HG03942.hp1 NA18612.hp1 NA18966.hp1 NA18970.hp2 NA18992.hp2 NA19006.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0004 a0001c0002t0006 others(3): Show a0001c0002t0001 a0001c0002t0004 a0001c0002t0006 a0001c0002t0024 a0001c0002t0026 a0001c0002t0081	a0001c0002t0001g0054 a0001c0002t0001g0095 a0001c0002t0001g0127 others(11): Show a0001c0002t0001g0054 a0001c0002t0001g0095 a0001c0002t0001g0127 a0001c0002t0001g0129 a0001c0002t0001g0131 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0004g0128 a0001c0002t0006g0165 a0001c0002t0006g0166 a0001c0002t0006g0220 a0001c0002t0024g0130 a0001c0002t0026g0051 a0001c0002t0081g0100	14	392	0.0357	14	c.61- others(29): Show c.61-1975_61-1974insTGGGGGGGGGGGGG	CPSF6	ENSG00000111605.18	transcript	ENST00000435070.7	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr12	TogoVar
CPSF7_chr11_61397729_61434975	61434591	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02451.hp2 HG02818.hp2 HG03209.hp1 HG02451.hp2 HG02818.hp2 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0133 a0001c0001t0001g0136 a0001c0001t0002g0131 a0001c0001t0001g0133 a0001c0001t0001g0136 a0001c0001t0002g0131	3	190	0.0158	14	c.-47 others(25): Show c.-4747_-4734dupAAAAAAAAAAAAAA	CPSF7	ENSG00000149532.16	transcript	ENST00000439958.8	protein_coding		4617		chr11	TogoVar
CPT1A_chr11_68749883_68846916	68836993	A A	ATTATGAA others(7): Show ATTATGAAAAATCAT	intron_variant intron_variant	MODIFIER	HG02132.hp2 HG02132.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0003 a0001c0001t0013g0003	1	236	0.0042	14	c.-14 others(31): Show c.-14+4781_-14+4782insATGATTTTTCATAA	CPT1A	ENSG00000110090.13	transcript	ENST00000265641.10	protein_coding	1/18			chr11	TogoVar
CPT1A_chr11_68749883_68846916	68838571	T T	TAAAAAAA others(7): Show TAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02004.hp1 HG02735.hp1 HG03491.hp1 HG02004.hp1 HG02735.hp1 HG03491.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0174 a0001c0001t0003g0173 a0001c0001t0003g0175 a0001c0001t0001g0174 a0001c0001t0003g0173 a0001c0001t0003g0175	3	236	0.0127	14	c.-14 others(31): Show c.-14+3203_-14+3204insTTTTTTTTTTTTTT	CPT1A	ENSG00000110090.13	transcript	ENST00000265641.10	protein_coding	1/18			chr11	TogoVar
CPT1A_chr11_68749883_68846916	68838572	T T	TAAAAAAA others(7): Show TAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0105 a0001c0001t0003g0105	1	236	0.0042	14	c.-14 others(31): Show c.-14+3189_-14+3202dupTTTTTTTTTTTTTT	CPT1A	ENSG00000110090.13	transcript	ENST00000265641.10	protein_coding	1/18			chr11	TogoVar
CPT1C_chr19_49686116_49718731	49712343	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01975.hp1 HG01981.hp2 others(16): Show HG01175.hp1 HG01975.hp1 HG01981.hp2 HG02155.hp2 HG02293.hp2 HG02300.hp1 NA18612.hp2 NA18939.hp2 NA18956.hp1 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18969.hp2 NA19002.hp2 NA19004.hp1 NA19081.hp1 NA19082.hp2 NA19085.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0001t0002 a0001c0006t0001 a0001c0001t0001 a0001c0001t0002 a0001c0006t0001	a0001c0001t0001g0003 a0001c0001t0001g0128 a0001c0001t0001g0134 others(15): Show a0001c0001t0001g0003 a0001c0001t0001g0128 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0156 a0001c0001t0001g0162 a0001c0001t0002g0074 a0001c0006t0001g0003 a0001c0006t0001g0143 a0001c0006t0001g0145	19	350	0.0543	14	c.201 others(31): Show c.2019+385_2020-377dupAAAAAAAAAAAAAA	CPT1C	ENSG00000169169.15	transcript	ENST00000598293.6	protein_coding	17/19		INFO_REALIGN_3_PRIME	chr19	TogoVar
CPVL_chr7_28990235_29151537	29123628	A A	AAAATATA others(7): Show AAAATATATATATAT	intron_variant intron_variant	MODIFIER	HG02071.hp2 HG02071.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0259 a0003c0003t0001g0259	1	282	0.0036	14	c.-10 others(31): Show c.-10-2558_-10-2557insATATATATATATTT	CPVL	ENSG00000106066.15	transcript	ENST00000265394.10	protein_coding	1/12			chr7	TogoVar
CPXM2_chr10_123740639_123896807	123750251	A A	AGAGCCTG others(7): Show AGAGCCTGAGGGTTC	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0157 a0001c0001t0001g0157	1	288	0.0035	14	c.201 others(33): Show c.2018-3248_2018-3235dupGAACCCTCAGGCTC	CPXM2	ENSG00000121898.13	transcript	ENST00000241305.4	protein_coding	13/13			chr10	TogoVar
CPXM2_chr10_123740639_123896807	123794734	C C	CGTGTGTG others(7): Show CGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG02027.hp2	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0001 a0001c0011t0001	a0001c0011t0001g0210 a0001c0011t0001g0210	1	288	0.0035	14	c.889 others(31): Show c.889+3228_889+3241dupACACACACACACAC	CPXM2	ENSG00000121898.13	transcript	ENST00000241305.4	protein_coding	6/13			chr10	TogoVar
CPXM2_chr10_123740639_123896807	123832826	T T	TAAAAAAA others(7): Show TAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03669.hp2 HG04204.hp1 HG03669.hp2 HG04204.hp1	a0001 a0014 a0001 a0014	a0001c0011 a0014c0033 a0001c0011 a0014c0033	a0001c0011t0002 a0014c0033t0001 a0001c0011t0002 a0014c0033t0001	a0001c0011t0002g0209 a0014c0033t0001g0179 a0001c0011t0002g0209 a0014c0033t0001g0179	2	288	0.0069	14	c.653 others(31): Show c.653+9522_653+9523insTTTTTTTTTTTTTT	CPXM2	ENSG00000121898.13	transcript	ENST00000241305.4	protein_coding	4/13			chr10	TogoVar
CPZ_chr4_8587765_8624752	8608134	C C	CTCCAGCT others(7): Show CTCCAGCTTCCAGCT	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00558.hp1 HG00609.hp1 others(41): Show HG00408.hp2 HG00558.hp1 HG00609.hp1 HG00609.hp2 HG00642.hp1 HG01884.hp2 HG01891.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp2 HG02080.hp2 HG02109.hp1 HG02165.hp1 HG02451.hp1 HG02615.hp2 HG02809.hp2 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02970.hp2 HG02976.hp1 HG03453.hp1 HG03491.hp1 HG03492.hp2 NA18522.hp1 NA18947.hp1 NA18950.hp2 NA18959.hp1 NA18963.hp1 NA18964.hp2 NA18972.hp1 NA18974.hp1 NA18975.hp1 NA18977.hp2 NA18991.hp2 NA19000.hp1 NA19000.hp2 NA19010.hp1 NA19055.hp2 NA19072.hp2 NA19081.hp2 NA19087.hp1 NA21309.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0007 a0001c0012 others(6): Show a0001c0001 a0001c0007 a0001c0012 a0001c0058 a0002c0004 a0002c0009 a0002c0065 a0003c0059 a0004c0017	a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 a0001c0007t0002 a0001c0012t0002 a0001c0058t0002 a0002c0004t0002 a0002c0009t0002 a0002c0065t0003 a0003c0059t0002 a0004c0017t0002	a0001c0001t0001g0222 a0001c0001t0001g0300 a0001c0001t0002g0024 others(32): Show a0001c0001t0001g0222 a0001c0001t0001g0300 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0065 a0001c0001t0002g0154 a0001c0001t0002g0280 a0001c0001t0002g0281 a0001c0001t0002g0285 a0001c0001t0002g0290 a0001c0001t0002g0291 a0001c0001t0002g0292 a0001c0001t0002g0293 a0001c0001t0002g0294 a0001c0001t0002g0295 a0001c0001t0002g0296 a0001c0001t0002g0297 a0001c0001t0002g0298 a0001c0001t0002g0301 a0001c0001t0002g0302 a0001c0001t0008g0068 a0001c0007t0002g0307 a0001c0012t0002g0223 a0001c0012t0002g0224 a0001c0058t0002g0069 a0002c0004t0002g0259 a0002c0009t0002g0062 a0002c0009t0002g0063 a0002c0009t0002g0257 a0002c0065t0003g0266 a0003c0059t0002g0079 a0004c0017t0002g0190 a0004c0017t0002g0219 a0004c0017t0002g0220	44	442	0.0996	14	c.122 others(31): Show c.1227+715_1227+716insTTCCAGCTTCCAGC	CPZ	ENSG00000109625.19	transcript	ENST00000360986.9	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CPZ_chr4_8587765_8624752	8608135	T T	TCCAGCCC others(7): Show TCCAGCCCCCAGCCC	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01099.hp2 HG01106.hp1 others(1): Show HG00738.hp2 HG01099.hp2 HG01106.hp1 NA18982.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0046 a0001c0001t0001g0136 a0001c0001t0001g0172 a0001c0001t0001g0046 a0001c0001t0001g0136 a0001c0001t0001g0172	4	442	0.0091	14	c.122 others(31): Show c.1227+723_1227+736dupCCCCAGCCCCCAGC	CPZ	ENSG00000109625.19	transcript	ENST00000360986.9	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CPZ_chr4_8587765_8624752	8608646	G G	GTGTGTGT others(7): Show GTGTGTGTGTATGCC	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG01106.hp2 HG02723.hp1 others(4): Show HG00323.hp1 HG01106.hp2 HG02723.hp1 HG02976.hp2 HG03041.hp2 HG03209.hp1 NA19030.hp1	a0000 a0005 a0006 others(1): Show a0000 a0005 a0006 a0007	a0000c0035 a0005c0033 a0006c0015 others(1): Show a0000c0035 a0005c0033 a0006c0015 a0007c0043	a0000c0035t0001 a0005c0033t0001 a0006c0015t0002 others(1): Show a0000c0035t0001 a0005c0033t0001 a0006c0015t0002 a0007c0043t0002	a0000c0035t0001g0248 a0005c0033t0001g0249 a0006c0015t0002g0239 others(4): Show a0000c0035t0001g0248 a0005c0033t0001g0249 a0006c0015t0002g0239 a0006c0015t0002g0241 a0006c0015t0002g0242 a0006c0015t0002g0243 a0007c0043t0002g0176	7	442	0.0158	14	c.122 others(33): Show c.1227+1223_1227+1224insTGTGTGTATGCCTG	CPZ	ENSG00000109625.19	transcript	ENST00000360986.9	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CP_chr3_149167497_149226829	149172318	T T	TCACACAC others(7): Show TCACACACACACACA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01346.hp2 HG01884.hp1 HG02683.hp2 others(1): Show HG01346.hp2 HG01884.hp1 HG02683.hp2 NA18906.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0003 a0001c0003t0007 a0002c0002t0003 others(1): Show a0001c0001t0003 a0001c0003t0007 a0002c0002t0003 a0002c0002t0007	a0001c0001t0003g0336 a0001c0003t0007g0092 a0002c0002t0003g0288 others(1): Show a0001c0001t0003g0336 a0001c0003t0007g0092 a0002c0002t0003g0288 a0002c0002t0007g0318	4	376	0.0106	14	c.13 others(25): Show c.1382_*1395dupTGTGTGTGTGTGTG	CP	ENSG00000047457.14	transcript	ENST00000264613.11	protein_coding		178		chr3	TogoVar
CP_chr3_149167497_149226829	149175664	A A	AGTGTGTG others(7): Show AGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00408.hp1 HG00558.hp1 others(42): Show HG00280.hp1 HG00408.hp1 HG00558.hp1 HG00673.hp2 HG01175.hp1 HG01358.hp2 HG02602.hp1 HG02895.hp2 HG02922.hp2 HG02976.hp2 HG03098.hp2 HG03139.hp1 HG03195.hp1 HG03225.hp1 HG03516.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG04228.hp2 HG06807.hp2 NA18747.hp2 NA18943.hp2 NA18945.hp2 NA18956.hp1 NA18966.hp1 NA18970.hp2 NA18989.hp1 NA18991.hp2 NA19000.hp2 NA19001.hp1 NA19003.hp2 NA19009.hp1 NA19011.hp2 NA19012.hp2 NA19030.hp2 NA19064.hp1 NA19077.hp1 NA19079.hp1 NA19081.hp1 NA19081.hp2 NA19088.hp1 NA19090.hp2 NA20129.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0011 a0012	a0001c0001 a0001c0003 a0002c0002 others(4): Show a0001c0001 a0001c0003 a0002c0002 a0002c0006 a0003c0004 a0011c0020 a0012c0017	a0001c0001t0001 a0001c0001t0002 a0001c0003t0007 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0003t0007 a0002c0002t0002 a0002c0006t0002 a0003c0004t0002 a0011c0020t0002 a0012c0017t0007	a0001c0001t0001g0024 a0001c0001t0001g0030 a0001c0001t0001g0049 others(39): Show a0001c0001t0001g0024 a0001c0001t0001g0030 a0001c0001t0001g0049 a0001c0001t0001g0060 a0001c0001t0001g0064 a0001c0001t0001g0068 a0001c0001t0001g0079 a0001c0001t0001g0119 a0001c0001t0001g0121 a0001c0001t0001g0188 a0001c0001t0001g0245 a0001c0001t0001g0268 a0001c0001t0002g0003 a0001c0001t0002g0006 a0001c0001t0002g0052 a0001c0001t0002g0063 a0001c0001t0002g0065 a0001c0001t0002g0117 a0001c0001t0002g0150 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0248 a0001c0001t0002g0285 a0001c0001t0002g0312 a0001c0001t0002g0324 a0001c0001t0002g0328 a0001c0001t0002g0329 a0001c0001t0002g0332 a0001c0001t0002g0337 a0001c0003t0007g0313 a0002c0002t0002g0275 a0002c0002t0002g0276 a0002c0002t0002g0281 a0002c0002t0002g0338 a0002c0006t0002g0277 a0002c0006t0002g0278 a0002c0006t0002g0279 a0002c0006t0002g0280 a0003c0004t0002g0228 a0003c0004t0002g0231 a0011c0020t0002g0164 a0012c0017t0007g0306	45	376	0.1197	14	c.318 others(31): Show c.3181+572_3181+585dupACACACACACACAC	CP	ENSG00000047457.14	transcript	ENST00000264613.11	protein_coding	18/18			chr3	TogoVar
CP_chr3_149167497_149226829	149175667	G G	GTGTGTGT others(7): Show GTGTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0016 a0016	a0016c0015 a0016c0015	a0016c0015t0009 a0016c0015t0009	a0016c0015t0009g0314 a0016c0015t0009g0314	1	376	0.0027	14	c.318 others(31): Show c.3181+582_3181+583insTACACACACACACA	CP	ENSG00000047457.14	transcript	ENST00000264613.11	protein_coding	18/18			chr3	TogoVar
CR1L_chr1_207640133_207728703	207643914	G G	GTATATAT others(7): Show GTATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03195.hp1 NA18747.hp2 HG03195.hp1 NA18747.hp2	a0002 a0024 a0002 a0024	a0002c0002 a0024c0029 a0002c0002 a0024c0029	a0002c0002t0001 a0024c0029t0001 a0002c0002t0001 a0024c0029t0001	a0002c0002t0001g0059 a0024c0029t0001g0041 a0002c0002t0001g0059 a0024c0029t0001g0041	2	346	0.0058	14	c.-13 others(25): Show c.-1320_-1319insTATATATATATATA	CR1L	ENSG00000197721.17	transcript	ENST00000508064.7	protein_coding		1218		chr1	TogoVar
CR1L_chr1_207640133_207728703	207648202	C C	CACACACA others(7): Show CACACACACACACAG	intron_variant intron_variant	MODIFIER	HG03704.hp2 HG03704.hp2	a0015 a0015	a0015c0024 a0015c0024	a0015c0024t0001 a0015c0024t0001	a0015c0024t0001g0260 a0015c0024t0001g0260	1	346	0.0029	14	c.97+ others(29): Show c.97+2875_97+2876insCACACACACAGACA	CR1L	ENSG00000197721.17	transcript	ENST00000508064.7	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
CR1L_chr1_207640133_207728703	207706013	G G	GTATATAT others(7): Show GTATATATATATATA	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0001 a0005c0005t0001	a0005c0005t0001g0028 a0005c0005t0001g0028	1	346	0.0029	14	c.132 others(33): Show c.1329-2146_1329-2133dupTATATATATATATA	CR1L	ENSG00000197721.17	transcript	ENST00000508064.7	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
CR1L_chr1_207640133_207728703	207707785	T T	TACACACA others(7): Show TACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01071.hp2 HG01358.hp1 others(21): Show HG01070.hp2 HG01071.hp2 HG01358.hp1 HG02818.hp1 HG02976.hp1 HG03041.hp1 HG03098.hp1 HG03927.hp1 NA18612.hp1 NA18944.hp2 NA18959.hp2 NA18960.hp1 NA18963.hp2 NA18971.hp2 NA18977.hp1 NA18978.hp2 NA18984.hp2 NA18985.hp1 NA18989.hp2 NA18995.hp1 NA19010.hp1 NA19012.hp2 NA19030.hp1 NA19079.hp1	a0001 a0002 a0004 others(4): Show a0001 a0002 a0004 a0005 a0007 a0013 a0029	a0001c0001 a0002c0002 a0004c0004 others(5): Show a0001c0001 a0002c0002 a0004c0004 a0005c0005 a0005c0036 a0007c0007 a0013c0011 a0029c0026	a0001c0001t0001 a0002c0002t0001 a0004c0004t0001 others(5): Show a0001c0001t0001 a0002c0002t0001 a0004c0004t0001 a0005c0005t0001 a0005c0036t0001 a0007c0007t0001 a0013c0011t0001 a0029c0026t0001	a0001c0001t0001g0167 a0001c0001t0001g0201 a0001c0001t0001g0207 others(21): Show a0001c0001t0001g0167 a0001c0001t0001g0201 a0001c0001t0001g0207 a0001c0001t0001g0212 a0001c0001t0001g0222 a0001c0001t0001g0223 a0002c0002t0001g0045 a0002c0002t0001g0107 a0004c0004t0001g0288 a0004c0004t0001g0293 a0004c0004t0001g0299 a0004c0004t0001g0304 a0004c0004t0001g0308 a0004c0004t0001g0313 a0004c0004t0001g0318 a0005c0005t0001g0021 a0005c0005t0001g0027 a0005c0036t0001g0015 a0007c0007t0001g0130 a0007c0007t0001g0178 a0007c0007t0001g0276 a0013c0011t0001g0140 a0013c0011t0001g0145 a0029c0026t0001g0317	24	346	0.0694	14	c.132 others(31): Show c.1329-371_1329-358dupCACACACACACACA	CR1L	ENSG00000197721.17	transcript	ENST00000508064.7	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
CR1_chr1_207491157_207646765	207538093	C C	CATATATA others(7): Show CATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00597.hp2 HG00738.hp1 others(14): Show HG00408.hp2 HG00597.hp2 HG00738.hp1 HG01168.hp1 HG01934.hp2 HG01943.hp2 HG02083.hp1 HG02109.hp2 HG02273.hp1 HG02630.hp1 HG03041.hp1 HG03688.hp1 NA18940.hp1 NA18940.hp2 NA18978.hp1 NA18993.hp1 NA19060.hp2	a0002 a0004 a0007 others(4): Show a0002 a0004 a0007 a0009 a0010 a0015 a0044	a0002c0002 a0004c0004 a0007c0032 others(4): Show a0002c0002 a0004c0004 a0007c0032 a0009c0007 a0010c0009 a0015c0055 a0044c0072	a0002c0002t0001 a0004c0004t0003 a0007c0032t0001 others(4): Show a0002c0002t0001 a0004c0004t0003 a0007c0032t0001 a0009c0007t0001 a0010c0009t0002 a0015c0055t0002 a0044c0072t0002	a0002c0002t0001g0114 a0002c0002t0001g0163 a0002c0002t0001g0167 others(14): Show a0002c0002t0001g0114 a0002c0002t0001g0163 a0002c0002t0001g0167 a0002c0002t0001g0170 a0002c0002t0001g0203 a0002c0002t0001g0215 a0002c0002t0001g0221 a0002c0002t0001g0223 a0004c0004t0003g0116 a0007c0032t0001g0051 a0009c0007t0001g0202 a0009c0007t0001g0214 a0009c0007t0001g0216 a0009c0007t0001g0217 a0010c0009t0002g0335 a0015c0055t0002g0070 a0044c0072t0002g0304	17	360	0.0472	14	c.175 others(33): Show c.1752-1871_1752-1858dupATATATATATATAT	CR1	ENSG00000203710.12	transcript	ENST00000367049.9	protein_coding	11/46		INFO_REALIGN_3_PRIME	chr1	TogoVar
CR1_chr1_207491157_207646765	207617483	G G	GTATATAT others(7): Show GTATATATATATATA	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02965.hp2 HG03130.hp1 HG02257.hp2 HG02965.hp2 HG03130.hp1	a0011 a0025 a0036 a0011 a0025 a0036	a0011c0010 a0025c0025 a0036c0038 a0011c0010 a0025c0025 a0036c0038	a0011c0010t0002 a0025c0025t0001 a0036c0038t0016 a0011c0010t0002 a0025c0025t0001 a0036c0038t0016	a0011c0010t0002g0181 a0025c0025t0001g0017 a0036c0038t0016g0060 a0011c0010t0002g0181 a0025c0025t0001g0017 a0036c0038t0016g0060	3	360	0.0083	14	c.689 others(31): Show c.6890-576_6890-563dupATATATATATATAT	CR1	ENSG00000203710.12	transcript	ENST00000367049.9	protein_coding	41/46		INFO_REALIGN_3_PRIME	chr1	TogoVar
CR1_chr1_207491157_207646765	207617507	A A	ATATATAT others(7): Show ATATATATATGTGTG	intron_variant intron_variant	MODIFIER	HG00544.hp1 NA18960.hp2 NA18987.hp2 others(1): Show HG00544.hp1 NA18960.hp2 NA18987.hp2 NA18988.hp1	a0004 a0008 a0018 others(1): Show a0004 a0008 a0018 a0051	a0004c0004 a0008c0036 a0018c0014 others(1): Show a0004c0004 a0008c0036 a0018c0014 a0051c0069	a0004c0004t0018 a0008c0036t0001 a0018c0014t0001 others(1): Show a0004c0004t0018 a0008c0036t0001 a0018c0014t0001 a0051c0069t0001	a0004c0004t0018g0120 a0008c0036t0001g0145 a0018c0014t0001g0117 others(1): Show a0004c0004t0018g0120 a0008c0036t0001g0145 a0018c0014t0001g0117 a0051c0069t0001g0173	4	360	0.0111	14	c.689 others(31): Show c.6890-563_6890-562insATATATATGTGTGT	CR1	ENSG00000203710.12	transcript	ENST00000367049.9	protein_coding	41/46		INFO_REALIGN_3_PRIME	chr1	TogoVar
CR1_chr1_207491157_207646765	207617507	A A	ATATGTGT others(7): Show ATATGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02559.hp1 HG02630.hp1 others(5): Show HG02109.hp2 HG02559.hp1 HG02630.hp1 HG02818.hp2 HG02895.hp1 HG02897.hp2 HG03486.hp1 HG03579.hp2	a0010 a0044 a0047 a0010 a0044 a0047	a0010c0009 a0044c0072 a0047c0071 a0010c0009 a0044c0072 a0047c0071	a0010c0009t0002 a0044c0072t0002 a0047c0071t0012 a0010c0009t0002 a0044c0072t0002 a0047c0071t0012	a0010c0009t0002g0258 a0010c0009t0002g0259 a0010c0009t0002g0269 others(5): Show a0010c0009t0002g0258 a0010c0009t0002g0259 a0010c0009t0002g0269 a0010c0009t0002g0273 a0010c0009t0002g0303 a0010c0009t0002g0335 a0044c0072t0002g0304 a0047c0071t0012g0271	8	360	0.0222	14	c.689 others(31): Show c.6890-563_6890-562insATGTGTGTGTGTGT	CR1	ENSG00000203710.12	transcript	ENST00000367049.9	protein_coding	41/46		INFO_REALIGN_3_PRIME	chr1	TogoVar
CR1_chr1_207491157_207646765	207617507	A A	ATGTGTGT others(7): Show ATGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0010 a0010	a0010c0009 a0010c0009	a0010c0009t0002 a0010c0009t0002	a0010c0009t0002g0270 a0010c0009t0002g0270	1	360	0.0028	14	c.689 others(31): Show c.6890-546_6890-533dupGTGTGTGTGTGTGT	CR1	ENSG00000203710.12	transcript	ENST00000367049.9	protein_coding	41/46		INFO_REALIGN_3_PRIME	chr1	TogoVar
CR1_chr1_207491157_207646765	207643914	G G	GTATATAT others(7): Show GTATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03195.hp1 NA18747.hp1 HG03195.hp1 NA18747.hp1	a0003 a0006 a0003 a0006	a0003c0003 a0006c0006 a0003c0003 a0006c0006	a0003c0003t0002 a0006c0006t0002 a0003c0003t0002 a0006c0006t0002	a0003c0003t0002g0142 a0006c0006t0002g0081 a0003c0003t0002g0142 a0006c0006t0002g0081	2	360	0.0056	14	c.45 others(25): Show c.4505_*4506insTATATATATATATA	CR1	ENSG00000203710.12	transcript	ENST00000367049.9	protein_coding		2150		chr1	TogoVar
CR2_chr1_207449328_207494892	207458059	A A	AACACACA others(7): Show AACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00735.hp1 HG01168.hp1 others(30): Show HG00408.hp1 HG00735.hp1 HG01168.hp1 HG01496.hp1 HG01884.hp1 HG01884.hp2 HG02080.hp2 HG02083.hp1 HG02132.hp1 HG02145.hp2 HG02293.hp2 HG02523.hp1 HG02602.hp2 HG02615.hp1 HG02630.hp1 HG02922.hp2 HG02970.hp2 HG02976.hp1 HG03017.hp2 HG03130.hp1 HG03225.hp1 HG03688.hp1 HG03688.hp2 HG04228.hp2 HG06807.hp2 NA18942.hp1 NA18963.hp2 NA18969.hp1 NA19000.hp1 NA19003.hp1 NA19009.hp2 NA19011.hp1 NA19083.hp1	a0001 a0002 a0008 others(3): Show a0001 a0002 a0008 a0012 a0015 a0021	a0001c0001 a0002c0005 a0008c0012 others(3): Show a0001c0001 a0002c0005 a0008c0012 a0012c0014 a0015c0018 a0021c0027	a0001c0001t0001 a0001c0001t0003 a0002c0005t0001 others(4): Show a0001c0001t0001 a0001c0001t0003 a0002c0005t0001 a0008c0012t0003 a0012c0014t0001 a0015c0018t0001 a0021c0027t0001	a0001c0001t0001g0003 a0001c0001t0001g0029 a0001c0001t0001g0077 others(26): Show a0001c0001t0001g0003 a0001c0001t0001g0029 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0003g0081 a0002c0005t0001g0254 a0008c0012t0003g0055 a0012c0014t0001g0003 a0012c0014t0001g0082 a0015c0018t0001g0255 a0021c0027t0001g0003	33	378	0.0873	14	c.58+ others(29): Show c.58+3610_58+3623dupACACACACACACAC	CR2	ENSG00000117322.19	transcript	ENST00000367057.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
CR2_chr1_207449328_207494892	207486230	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0003 a0001c0007t0003	a0001c0007t0003g0187 a0001c0007t0003g0187	1	378	0.0027	14	c.18 others(29): Show c.18+671_*18+684dupAAAAAAAAAAAAAA	CR2	ENSG00000117322.19	transcript	ENST00000367057.8	protein_coding	19/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
CRACDL_chr2_98788846_98941225	98795040	A A	AATATATA others(7): Show AATATATAAAAATTT	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG01346.hp1 HG02735.hp1 others(1): Show HG01255.hp2 HG01346.hp1 HG02735.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0105 a0001c0001t0001g0149 a0001c0001t0001g0168 others(1): Show a0001c0001t0001g0105 a0001c0001t0001g0149 a0001c0001t0001g0168 a0001c0001t0001g0177	4	316	0.0127	14	c.275 others(31): Show c.2750-370_2750-369insAAATTTTTATATAT	CRACDL	ENSG00000196872.12	transcript	ENST00000397899.7	protein_coding	9/9			chr2	TogoVar
CRACDL_chr2_98788846_98941225	98795075	A A	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0043 a0001c0001t0001g0043	1	316	0.0032	14	c.275 others(31): Show c.2750-405_2750-404insAAAAAAAAAAAAAA	CRACDL	ENSG00000196872.12	transcript	ENST00000397899.7	protein_coding	9/9			chr2	TogoVar
CRACDL_chr2_98788846_98941225	98795077	A A	ATATTTTT others(7): Show ATATTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02083.hp2 HG02135.hp1 HG02523.hp2 others(1): Show HG02083.hp2 HG02135.hp1 HG02523.hp2 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0015 others(1): Show a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0264	4	316	0.0127	14	c.275 others(31): Show c.2750-407_2750-406insAAAAAAAAAAAATA	CRACDL	ENSG00000196872.12	transcript	ENST00000397899.7	protein_coding	9/9			chr2	TogoVar
CRACDL_chr2_98788846_98941225	98795077	A A	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02056.hp2 HG02300.hp1 HG02630.hp1 others(4): Show HG02056.hp2 HG02300.hp1 HG02630.hp1 HG03491.hp1 HG03669.hp2 NA18994.hp2 NA20905.hp2	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0001 a0003c0003 a0005c0005 a0001c0001 a0003c0003 a0005c0005	a0001c0001t0001 a0003c0003t0001 a0005c0005t0001 a0001c0001t0001 a0003c0003t0001 a0005c0005t0001	a0001c0001t0001g0139 a0001c0001t0001g0146 a0001c0001t0001g0157 others(4): Show a0001c0001t0001g0139 a0001c0001t0001g0146 a0001c0001t0001g0157 a0001c0001t0001g0254 a0003c0003t0001g0162 a0003c0003t0001g0188 a0005c0005t0001g0031	7	316	0.0222	14	c.275 others(31): Show c.2750-420_2750-407dupAAAAAAAAAAAAAA	CRACDL	ENSG00000196872.12	transcript	ENST00000397899.7	protein_coding	9/9			chr2	TogoVar
CRACDL_chr2_98788846_98941225	98891376	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01167.hp1 HG01192.hp2 others(12): Show HG01109.hp2 HG01167.hp1 HG01192.hp2 HG01975.hp2 HG02109.hp2 HG02293.hp1 HG02630.hp2 HG02723.hp2 HG02818.hp1 HG03471.hp2 NA18948.hp2 NA18962.hp2 NA18988.hp1 NA20300.hp1 NA20752.hp1	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0010	a0001c0001 a0003c0003 a0004c0004 others(1): Show a0001c0001 a0003c0003 a0004c0004 a0010c0008	a0001c0001t0001 a0003c0003t0001 a0004c0004t0001 others(1): Show a0001c0001t0001 a0003c0003t0001 a0004c0004t0001 a0010c0008t0001	a0001c0001t0001g0036 a0001c0001t0001g0051 a0001c0001t0001g0052 others(12): Show a0001c0001t0001g0036 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0064 a0001c0001t0001g0081 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0196 a0001c0001t0001g0198 a0001c0001t0001g0285 a0001c0001t0001g0286 a0003c0003t0001g0291 a0004c0004t0001g0301 a0010c0008t0001g0297	15	316	0.0475	14	c.-11 others(33): Show c.-11+44548_-11+44561dupTTTTTTTTTTTTTT	CRACDL	ENSG00000196872.12	transcript	ENST00000397899.7	protein_coding	1/9			chr2	TogoVar
CRACDL_chr2_98788846_98941225	98918539	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01496.hp1 NA20752.hp2 HG01496.hp1 NA20752.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0004 a0003c0003t0002g0005 a0003c0003t0002g0004 a0003c0003t0002g0005	2	316	0.0063	14	c.-11 others(33): Show c.-11+17385_-11+17398dupTTTTTTTTTTTTTT	CRACDL	ENSG00000196872.12	transcript	ENST00000397899.7	protein_coding	1/9			chr2	TogoVar
CRACD_chr4_56044098_56335609	56070847	C C	CTGTGTGT others(7): Show CTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00544.hp2 HG00733.hp1 others(15): Show HG00323.hp2 HG00544.hp2 HG00733.hp1 HG01255.hp2 HG01358.hp1 HG02027.hp1 HG02055.hp1 HG02559.hp1 HG03209.hp2 HG03486.hp1 HG03540.hp2 HG03669.hp2 HG03704.hp2 HG04115.hp1 NA18952.hp1 NA18978.hp2 NA18979.hp2 NA19084.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0008	a0001c0001 a0002c0003 a0002c0006 others(4): Show a0001c0001 a0002c0003 a0002c0006 a0003c0002 a0003c0007 a0004c0004 a0008c0010	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(7): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0023 a0002c0003t0001 a0002c0006t0001 a0003c0002t0002 a0003c0007t0001 a0004c0004t0004 a0008c0010t0008	a0001c0001t0001g0114 a0001c0001t0003g0105 a0001c0001t0003g0107 others(15): Show a0001c0001t0001g0114 a0001c0001t0003g0105 a0001c0001t0003g0107 a0001c0001t0003g0220 a0001c0001t0005g0021 a0001c0001t0005g0167 a0001c0001t0023g0225 a0002c0003t0001g0027 a0002c0003t0001g0089 a0002c0003t0001g0190 a0002c0003t0001g0211 a0002c0003t0001g0221 a0002c0006t0001g0247 a0003c0002t0002g0106 a0003c0002t0002g0224 a0003c0007t0001g0242 a0004c0004t0004g0229 a0008c0010t0008g0094	18	250	0.0720	14	c.-33 others(35): Show c.-336+21578_-336+21591dupGTGTGTGTGTGTGT	CRACD	ENSG00000109265.15	transcript	ENST00000682029.1	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CRACD_chr4_56044098_56335609	56182863	A A	ATGTGTGT others(7): Show ATGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG00609.hp1 HG00609.hp2 others(6): Show HG00544.hp1 HG00609.hp1 HG00609.hp2 HG02109.hp1 HG02132.hp2 HG02145.hp2 HG03669.hp1 NA18945.hp2 NA19082.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0006 a0016	a0001c0001 a0002c0003 a0003c0002 others(2): Show a0001c0001 a0002c0003 a0003c0002 a0006c0016 a0016c0019	a0001c0001t0005 a0001c0001t0026 a0002c0003t0001 others(3): Show a0001c0001t0005 a0001c0001t0026 a0002c0003t0001 a0003c0002t0002 a0006c0016t0003 a0016c0019t0011	a0001c0001t0005g0171 a0001c0001t0026g0077 a0002c0003t0001g0062 others(6): Show a0001c0001t0005g0171 a0001c0001t0026g0077 a0002c0003t0001g0062 a0002c0003t0001g0186 a0002c0003t0001g0198 a0003c0002t0002g0139 a0003c0002t0002g0250 a0006c0016t0003g0033 a0016c0019t0011g0041	9	250	0.0360	14	c.-18 others(33): Show c.-189+3459_-189+3472dupGTGTGTGTGTGTGT	CRACD	ENSG00000109265.15	transcript	ENST00000682029.1	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CRACD_chr4_56044098_56335609	56207745	C C	CATATATA others(7): Show CATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18968.hp2 NA18971.hp2 NA18978.hp1 others(1): Show NA18968.hp2 NA18971.hp2 NA18978.hp1 NA18998.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0028	a0001c0001 a0002c0003 a0004c0004 others(1): Show a0001c0001 a0002c0003 a0004c0004 a0028c0030	a0001c0001t0003 a0002c0003t0032 a0004c0004t0004 others(1): Show a0001c0001t0003 a0002c0003t0032 a0004c0004t0004 a0028c0030t0001	a0001c0001t0003g0205 a0002c0003t0032g0194 a0004c0004t0004g0066 others(1): Show a0001c0001t0003g0205 a0002c0003t0032g0194 a0004c0004t0004g0066 a0028c0030t0001g0203	4	250	0.0160	14	c.-18 others(35): Show c.-189+28336_-189+28349dupATATATATATATAT	CRACD	ENSG00000109265.15	transcript	ENST00000682029.1	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CRACD_chr4_56044098_56335609	56214652	A A	ACTCTCTC others(7): Show ACTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	NA19011.hp1 NA19011.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0004 a0004c0004t0004	a0004c0004t0004g0138 a0004c0004t0004g0138	1	250	0.0040	14	c.-18 others(35): Show c.-189+35239_-189+35252dupCTCTCTCTCTCTCT	CRACD	ENSG00000109265.15	transcript	ENST00000682029.1	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CRACD_chr4_56044098_56335609	56214681	C C	CTCTCTCT others(7): Show CTCTCTCTCTCTATA	intron_variant intron_variant	MODIFIER	NA18961.hp1 NA18998.hp1 NA18961.hp1 NA18998.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0003 a0002c0003t0032 a0001c0001t0003 a0002c0003t0032	a0001c0001t0003g0128 a0002c0003t0032g0194 a0001c0001t0003g0128 a0002c0003t0032g0194	2	250	0.0080	14	c.-18 others(35): Show c.-189+35252_-189+35253insCTCTCTCTCTATAT	CRACD	ENSG00000109265.15	transcript	ENST00000682029.1	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CRACD_chr4_56044098_56335609	56286525	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00741.hp1 HG01106.hp1 others(16): Show HG00733.hp2 HG00741.hp1 HG01106.hp1 HG01106.hp2 HG01175.hp1 HG02055.hp1 HG02083.hp2 HG02300.hp2 HG03239.hp1 HG03834.hp2 NA18960.hp2 NA18975.hp2 NA19066.hp2 NA19068.hp2 NA19091.hp1 NA20300.hp1 NA20805.hp2 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0029 a0031	a0001c0001 a0002c0003 a0002c0008 others(5): Show a0001c0001 a0002c0003 a0002c0008 a0003c0002 a0004c0004 a0004c0022 a0029c0029 a0031c0021	a0001c0001t0003 a0001c0001t0004 a0001c0001t0020 others(7): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0020 a0002c0003t0001 a0002c0008t0030 a0003c0002t0002 a0004c0004t0004 a0004c0022t0002 a0029c0029t0024 a0031c0021t0002	a0001c0001t0003g0014 a0001c0001t0003g0182 a0001c0001t0003g0215 others(16): Show a0001c0001t0003g0014 a0001c0001t0003g0182 a0001c0001t0003g0215 a0001c0001t0003g0237 a0001c0001t0004g0166 a0001c0001t0020g0040 a0002c0003t0001g0036 a0002c0003t0001g0123 a0002c0008t0030g0151 a0003c0002t0002g0070 a0003c0002t0002g0088 a0003c0002t0002g0125 a0003c0002t0002g0209 a0003c0002t0002g0224 a0004c0004t0004g0189 a0004c0004t0004g0192 a0004c0022t0002g0218 a0029c0029t0024g0074 a0031c0021t0002g0238	19	250	0.0760	14	c.-16 others(33): Show c.-16-11680_-16-11667dupAAAAAAAAAAAAAA	CRACD	ENSG00000109265.15	transcript	ENST00000682029.1	protein_coding	3/10		INFO_REALIGN_3_PRIME	chr4	TogoVar

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