Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CSRNP3_chr2_165464698_165694407	165611379	G G	GTGTGTGT others(7): Show GTGTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00408.hp1 HG00408.hp2 others(34): Show HG00280.hp1 HG00408.hp1 HG00408.hp2 HG00609.hp2 HG00673.hp1 HG01099.hp2 HG01261.hp2 HG01358.hp2 HG01978.hp1 HG02055.hp1 HG02071.hp1 HG02083.hp2 HG02132.hp1 HG02615.hp2 HG02809.hp2 HG03516.hp1 HG03831.hp1 HG04228.hp1 NA18747.hp1 NA18942.hp2 NA18950.hp1 NA18952.hp1 NA18954.hp1 NA18956.hp2 NA18959.hp2 NA18966.hp1 NA18974.hp1 NA18984.hp2 NA18992.hp1 NA18999.hp1 NA19005.hp1 NA19006.hp2 NA19009.hp1 NA19054.hp1 NA19075.hp1 NA19082.hp2 NA19087.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0003c0005 a0001c0001 a0001c0002 a0003c0005	a0001c0001t0002 a0001c0001t0003 a0001c0001t0009 others(13): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0009 a0001c0001t0023 a0001c0001t0029 a0001c0001t0033 a0001c0001t0085 a0001c0002t0001 a0001c0002t0005 a0001c0002t0008 a0001c0002t0040 a0001c0002t0041 a0001c0002t0042 a0001c0002t0082 a0001c0002t0086 a0003c0005t0001	a0001c0001t0002g0008 a0001c0001t0002g0091 a0001c0001t0002g0168 others(34): Show a0001c0001t0002g0008 a0001c0001t0002g0091 a0001c0001t0002g0168 a0001c0001t0002g0232 a0001c0001t0003g0185 a0001c0001t0009g0231 a0001c0001t0023g0138 a0001c0001t0029g0126 a0001c0001t0029g0186 a0001c0001t0033g0211 a0001c0001t0085g0137 a0001c0002t0001g0005 a0001c0002t0001g0006 a0001c0002t0001g0015 a0001c0002t0001g0086 a0001c0002t0001g0090 a0001c0002t0001g0111 a0001c0002t0001g0114 a0001c0002t0001g0127 a0001c0002t0001g0128 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0162 a0001c0002t0001g0205 a0001c0002t0001g0222 a0001c0002t0001g0228 a0001c0002t0001g0234 a0001c0002t0005g0068 a0001c0002t0005g0130 a0001c0002t0008g0163 a0001c0002t0008g0177 a0001c0002t0040g0142 a0001c0002t0041g0129 a0001c0002t0042g0246 a0001c0002t0082g0199 a0001c0002t0086g0055 a0003c0005t0001g0123	37	246	0.1504	14	c.148 others(33): Show c.148+16167_148+16168insGTGTGTGTGTGTAT	CSRNP3	ENSG00000178662.16	transcript	ENST00000651982.1	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
CSRNP3_chr2_165464698_165694407	165665775	A A	AAGAGAGA others(7): Show AAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0058 a0001c0002t0001g0058	1	246	0.0041	14	c.408 others(31): Show c.408+7769_408+7782dupGAGAGAGAGAGAGA	CSRNP3	ENSG00000178662.16	transcript	ENST00000651982.1	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
CSRNP3_chr2_165464698_165694407	165674681	A A	AATATATA others(7): Show AATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG02280.hp2 HG02886.hp1 others(3): Show HG01081.hp2 HG02280.hp2 HG02886.hp1 HG02895.hp1 HG04228.hp2 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0002 a0001c0001t0007 a0001c0001t0013 others(3): Show a0001c0001t0002 a0001c0001t0007 a0001c0001t0013 a0001c0002t0001 a0001c0002t0008 a0002c0003t0050	a0001c0001t0002g0045 a0001c0001t0007g0062 a0001c0001t0013g0201 others(3): Show a0001c0001t0002g0045 a0001c0001t0007g0062 a0001c0001t0013g0201 a0001c0002t0001g0229 a0001c0002t0008g0032 a0002c0003t0050g0209	6	246	0.0244	14	c.409 others(31): Show c.409-1611_409-1598dupTATATATATATATA	CSRNP3	ENSG00000178662.16	transcript	ENST00000651982.1	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
CSRNP3_chr2_165464698_165694407	165681726	C C	CATATATA others(7): Show CATATATATATATAT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02280.hp1 HG06807.hp2 HG02280.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0087 a0001c0001t0090 a0001c0001t0087 a0001c0001t0090	a0001c0001t0087g0159 a0001c0001t0090g0069 a0001c0001t0087g0159 a0001c0001t0090g0069	2	246	0.0081	14	c.19 others(25): Show c.1995_*2008dupTATATATATATATA	CSRNP3	ENSG00000178662.16	transcript	ENST00000651982.1	protein_coding	7/7	2009	INFO_REALIGN_3_PRIME	chr2	TogoVar
CSRNP3_chr2_165464698_165694407	165681760	T T	TATATATA others(7): Show TATATATATATATAC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0081 a0001c0001t0081	a0001c0001t0081g0237 a0001c0001t0081g0237	1	246	0.0041	14	c.20 others(25): Show c.2008_*2009insTATATATATATACA	CSRNP3	ENSG00000178662.16	transcript	ENST00000651982.1	protein_coding	7/7	2009	INFO_REALIGN_3_PRIME	chr2	TogoVar
CSRP2_chr12_76853709_76884019	76869529	A A	AACACACA others(7): Show AACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00609.hp2 HG02015.hp2 others(6): Show HG00438.hp2 HG00609.hp2 HG02015.hp2 HG02155.hp1 HG02622.hp2 HG03239.hp1 NA19072.hp1 NA19079.hp2 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0101 a0001c0001t0001g0129 a0001c0001t0001g0151 others(6): Show a0001c0001t0001g0101 a0001c0001t0001g0129 a0001c0001t0001g0151 a0001c0001t0001g0202 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0297 a0001c0001t0001g0298 a0001c0001t0001g0312	9	388	0.0232	14	c.-1- others(29): Show c.-1-3282_-1-3269dupGTGTGTGTGTGTGT	CSRP2	ENSG00000175183.10	transcript	ENST00000311083.10	protein_coding	1/5			chr12	TogoVar
CSRP3_chr11_19177030_19206983	19197563	C C	CTTTCTTT others(7): Show CTTTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG02615.hp1 HG03492.hp2 HG00621.hp2 HG02615.hp1 HG03492.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0001 a0001c0001t0001 a0001c0004t0001	a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0004t0001g0129 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0004t0001g0129	3	416	0.0072	14	c.-29 others(31): Show c.-29+4377_-29+4390dupAAGAAAGAAAGAAA	CSRP3	ENSG00000129170.10	transcript	ENST00000265968.9	protein_coding	1/5			chr11	TogoVar
CST1_chr20_23742562_23755935	23747001	T T	TACACACA others(7): Show TACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp1 HG00642.hp2 HG01071.hp2 others(5): Show HG00642.hp1 HG00642.hp2 HG01071.hp2 HG02486.hp1 HG02895.hp1 HG02897.hp2 HG02965.hp2 NA19082.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0008 a0001c0002t0001 a0001c0001t0001 a0001c0001t0008 a0001c0002t0001	a0001c0001t0001g0050 a0001c0001t0008g0021 a0001c0002t0001g0004 others(1): Show a0001c0001t0001g0050 a0001c0001t0008g0021 a0001c0002t0001g0004 a0001c0002t0001g0010	8	472	0.0170	14	c.81 others(23): Show c.814_*815insGTGTGTGTGTGTGT	CST1	ENSG00000170373.9	transcript	ENST00000304749.7	protein_coding		560		chr20	TogoVar
CST3_chr20_23628657_23642955	23637928	A A	AGCTAGAT others(7): Show AGCTAGATAGAGAGG	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18960.hp1 NA18960.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0050 a0001c0001t0007g0050	1	420	0.0024	14	c.-67 others(21): Show c.-67_-66insCCTCTCTATCTAGC	CST3	ENSG00000101439.9	transcript	ENST00000376925.8	protein_coding	1/3	67		chr20	TogoVar
CST4_chr20_23680640_23694038	23685075	T T	TACACACA others(7): Show TACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01255.hp1 HG02055.hp1 HG02055.hp2 others(3): Show HG01255.hp1 HG02055.hp1 HG02055.hp2 HG02451.hp1 NA18973.hp1 NA19088.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0003 a0003c0004t0003 a0001c0001t0003 a0003c0004t0003	a0001c0001t0003g0002 a0003c0004t0003g0011 a0001c0001t0003g0002 a0003c0004t0003g0011	6	452	0.0133	14	c.81 others(23): Show c.818_*819insGTGTGTGTGTGTGT	CST4	ENSG00000101441.5	transcript	ENST00000217423.4	protein_coding		564		chr20	TogoVar
CST7_chr20_24944269_24964928	24957013	G G	GGGGAGCA others(7): Show GGGGAGCAGGTGAGA	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02145.hp2 HG02486.hp2 others(7): Show HG02055.hp2 HG02145.hp2 HG02486.hp2 HG02630.hp1 HG02717.hp2 HG02809.hp1 HG03579.hp2 HG06807.hp2 NA18906.hp2 NA19240.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0009 a0001c0002t0004 a0001c0002t0009	a0001c0002t0004g0022 a0001c0002t0004g0034 a0001c0002t0004g0108 others(3): Show a0001c0002t0004g0022 a0001c0002t0004g0034 a0001c0002t0004g0108 a0001c0002t0004g0109 a0001c0002t0004g0113 a0001c0002t0009g0033	10	350	0.0286	14	c.71- others(27): Show c.71-271_71-270insAGCAGGTGAGAGGG	CST7	ENSG00000077984.6	transcript	ENST00000480798.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr20	TogoVar
CST9L_chr20_23559732_23573484	23561075	C C	CTTCTTTC others(7): Show CTTCTTTCCTTCTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19055.hp2 NA19055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	392	0.0026	14	c.38 others(25): Show c.3872_*3873insAAAGAAGGAAAGAA	CST9L	ENSG00000101435.5	transcript	ENST00000376979.4	protein_coding		3656		chr20	TogoVar
CSTB_chr21_43768950_43781308	43777600	C C	CTTTTCTT others(7): Show CTTTTCTTTCTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG02055.hp2 HG03486.hp1 others(1): Show HG01243.hp2 HG02055.hp2 HG03486.hp1 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0011 a0001c0001t0001g0019 a0001c0001t0002g0012 a0001c0001t0001g0011 a0001c0001t0001g0019 a0001c0001t0002g0012	4	452	0.0089	14	c.-13 others(25): Show c.-1332_-1331insAAAAAGAAAGAAAA	CSTB	ENSG00000160213.10	transcript	ENST00000291568.7	protein_coding		1293		chr21	TogoVar
CSTF1_chr20_56387645_56411362	56404812	A A	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01261.hp1 NA21309.hp1 HG01261.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0083 a0001c0001t0096 a0001c0001t0083 a0001c0001t0096	a0001c0001t0083g0010 a0001c0001t0096g0002 a0001c0001t0083g0010 a0001c0001t0096g0002	2	422	0.0047	14	c.10 others(25): Show c.1098_*1111dupTTTTTTTTTTTTTT	CSTF1	ENSG00000101138.12	transcript	ENST00000217109.9	protein_coding	6/6	1112	INFO_REALIGN_3_PRIME	chr20	TogoVar
CSTF3_chr11_33079584_33166480	33166264	A A	ATGTAAGT others(7): Show ATGTAAGTGTGTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00597.hp1 HG00639.hp1 others(53): Show HG00099.hp1 HG00597.hp1 HG00639.hp1 HG00738.hp1 HG01069.hp2 HG01071.hp1 HG01074.hp1 HG01192.hp2 HG01243.hp2 HG01256.hp1 HG01256.hp2 HG01261.hp1 HG01346.hp2 HG01361.hp1 HG01516.hp2 HG02015.hp2 HG02027.hp1 HG02040.hp1 HG02135.hp2 HG02145.hp1 HG02165.hp1 HG02258.hp1 HG02572.hp1 HG03654.hp2 HG03834.hp1 HG03927.hp2 HG04184.hp2 HG04204.hp1 NA18940.hp1 NA18942.hp1 NA18942.hp2 NA18944.hp2 NA18953.hp2 NA18957.hp2 NA18960.hp1 NA18963.hp1 NA18965.hp1 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18970.hp1 NA18972.hp1 NA18974.hp2 NA18981.hp1 NA18982.hp2 NA18987.hp1 NA18987.hp2 NA18994.hp1 NA19000.hp1 NA19009.hp2 NA19054.hp1 NA19057.hp2 NA19068.hp2 NA19070.hp2 NA19080.hp2 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0002t0002	a0001c0001t0002g0023 a0001c0001t0002g0034 a0001c0001t0002g0036 others(48): Show a0001c0001t0002g0023 a0001c0001t0002g0034 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0040 a0001c0001t0002g0044 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0076 a0001c0001t0002g0078 a0001c0001t0002g0080 a0001c0001t0002g0082 a0001c0001t0002g0083 a0001c0001t0002g0084 a0001c0001t0002g0086 a0001c0001t0002g0111 a0001c0001t0003g0001 a0001c0001t0003g0007 a0001c0001t0003g0015 a0001c0001t0003g0028 a0001c0001t0003g0104 a0001c0001t0003g0105 a0001c0001t0003g0115 a0001c0001t0003g0116 a0001c0001t0003g0119 a0001c0001t0003g0121 a0001c0001t0003g0125 a0001c0001t0003g0127 a0001c0001t0003g0128 a0001c0001t0003g0131 a0001c0001t0003g0137 a0001c0001t0003g0142 a0001c0001t0003g0147 a0001c0001t0003g0148 a0001c0001t0003g0149 a0001c0001t0003g0153 a0001c0001t0003g0161 a0001c0001t0003g0163 a0001c0001t0003g0164 a0001c0001t0003g0165 a0001c0001t0003g0167 a0001c0001t0003g0169 a0001c0001t0003g0172 a0001c0001t0003g0176 a0001c0001t0003g0177 a0001c0001t0003g0181 a0001c0001t0003g0186 a0001c0001t0003g0187 a0001c0001t0003g0188 a0001c0001t0005g0022 a0001c0002t0002g0008	56	360	0.1556	14	c.-49 others(25): Show c.-4940_-4939insCACACACACTTACA	CSTF3	ENSG00000176102.13	transcript	ENST00000323959.9	protein_coding		4785		chr11	TogoVar
CSTPP1_chr11_46931761_47167247	46973780	A A	ATGTGTGT others(7): Show ATGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0220 a0001c0001t0004g0220	1	224	0.0045	14	c.47- others(31): Show c.47-13422_47-13409dupGTGTGTGTGTGTGT	CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr11	TogoVar
CSTPP1_chr11_46931761_47167247	47036034	G G	GATATATA others(7): Show GATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG02004.hp2 HG03710.hp1 HG01192.hp1 HG02004.hp2 HG03710.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0097 a0001c0001t0003g0098 a0001c0001t0003g0100 a0001c0001t0003g0097 a0001c0001t0003g0098 a0001c0001t0003g0100	3	224	0.0134	14	c.150 others(33): Show c.150-16345_150-16332dupATATATATATATAT	CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr11	TogoVar
CSTPP1_chr11_46931761_47167247	47065977	T T	TTGTGTGT others(7): Show TTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00621.hp2 HG00735.hp1 others(54): Show HG00438.hp1 HG00621.hp2 HG00735.hp1 HG00738.hp2 HG01099.hp2 HG01257.hp2 HG01358.hp2 HG01361.hp1 HG01515.hp1 HG01934.hp1 HG01975.hp2 HG01978.hp1 HG01981.hp2 HG01993.hp2 HG02004.hp1 HG02055.hp1 HG02080.hp2 HG02109.hp2 HG02148.hp2 HG02257.hp1 HG02257.hp2 HG02273.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp2 HG02602.hp1 HG02698.hp2 HG02809.hp2 HG02965.hp2 HG03017.hp2 HG03130.hp1 HG03139.hp1 HG03492.hp2 HG03654.hp1 HG03688.hp1 HG03710.hp2 HG03831.hp2 HG03942.hp1 HG04184.hp1 HG04184.hp2 NA18906.hp2 NA18947.hp2 NA18951.hp2 NA18962.hp2 NA18971.hp2 NA18973.hp1 NA18983.hp2 NA18989.hp2 NA18992.hp1 NA19000.hp2 NA19010.hp1 NA19011.hp1 NA19056.hp1 NA19062.hp2 NA19080.hp2 NA19084.hp1 NA20129.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0001 a0001c0001t0001 a0003c0003t0001	a0001c0001t0001g0076 a0001c0001t0001g0082 a0001c0001t0001g0084 others(54): Show a0001c0001t0001g0076 a0001c0001t0001g0082 a0001c0001t0001g0084 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0096 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0122 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0139 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0160 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0179 a0001c0001t0001g0186 a0001c0001t0001g0191 a0001c0001t0001g0203 a0003c0003t0001g0113	57	224	0.2545	14	c.280 others(33): Show c.280+13471_280+13484dupGTGTGTGTGTGTGT	CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr11	TogoVar
CSTPP1_chr11_46931761_47167247	47101164	A A	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG02622.hp2 HG00738.hp1 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0121 a0001c0001t0001g0189 a0001c0001t0001g0121 a0001c0001t0001g0189	2	224	0.0089	14	c.281 others(33): Show c.281-36469_281-36456dupTTTTTTTTTTTTTT	CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr11	TogoVar
CSTPP1_chr11_46931761_47167247	47122089	A A	AATATATA others(7): Show AATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18979.hp1 NA18979.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0159 a0001c0001t0001g0159	1	224	0.0045	14	c.281 others(33): Show c.281-15555_281-15554insTATATATATATATA	CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr11	TogoVar
CSTPP1_chr11_46931761_47167247	47122091	A A	AAAAAAAA others(7): Show AAAAAAAAAAAAAAT	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0093 a0001c0001t0003g0093	1	224	0.0045	14	c.281 others(33): Show c.281-15553_281-15552insAAAAAAAAAAAATA	CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr11	TogoVar
CSTPP1_chr11_46931761_47167247	47122091	A A	AAAAAAAA others(7): Show AAAAAAAAAAAATAT	intron_variant intron_variant	MODIFIER	NA18964.hp1 NA18964.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0090 a0001c0001t0001g0090	1	224	0.0045	14	c.281 others(33): Show c.281-15553_281-15552insAAAAAAAAAATATA	CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr11	TogoVar
CT45A1_chrX_135708639_135728228	135712996	C C	CCTTCCTT others(7): Show CCTTCCTTCCTTCCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00621.hp1 HG01943.hp1 HG02056.hp1 others(8): Show HG00621.hp1 HG01943.hp1 HG02056.hp1 HG02132.hp1 HG02257.hp1 HG02572.hp1 HG02717.hp1 HG03688.hp1 NA18948.hp1 NA19012.hp1 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0002 a0001c0001t0001 a0002c0002t0002	a0001c0001t0001g0019 a0002c0002t0002g0003 a0002c0002t0002g0006 others(6): Show a0001c0001t0001g0019 a0002c0002t0002g0003 a0002c0002t0002g0006 a0002c0002t0002g0016 a0002c0002t0002g0020 a0002c0002t0002g0021 a0002c0002t0002g0024 a0002c0002t0002g0025 a0002c0002t0002g0037	11	57	0.1930	14	c.-70 others(23): Show c.-701_-700insCTTCCTTCCTTCCT	CT45A1	ENSG00000268940.6	transcript	ENST00000594565.6	protein_coding		642		chrX	TogoVar
CT45A1_chrX_135708639_135728228	135718352	A A	ATTTTTGG others(7): Show ATTTTTGGCTTGATC	intron_variant intron_variant	MODIFIER	NA19081.hp2 NA19081.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0036 a0004c0004t0001g0036	1	57	0.0175	14	c.-6- others(27): Show c.-6-580_-6-567dupTTTGGCTTGATCTT	CT45A1	ENSG00000268940.6	transcript	ENST00000594565.6	protein_coding	1/4		INFO_REALIGN_3_PRIME	chrX	TogoVar
CT45A9_chrX_135858418_135876812	135863284	A A	AACACACA others(7): Show AACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	1	13	0.0769	14	c.68 others(23): Show c.686_*687insGTGTGTGTGTGTGT	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding		133		chrX	TogoVar
CT45A9_chrX_135858418_135876812	135873034	G G	GAGAGAGA others(7): Show GAGAGAGAAAGAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp1 HG00642.hp1	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0003 a0003c0002t0003	a0003c0002t0003g0010 a0003c0002t0003g0010	1	13	0.0769	14	c.-14 others(25): Show c.-1468_-1467insTTTTCTTTCTCTCT	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding		1223		chrX	TogoVar
CTAGE9_chr6_131703441_131716017	131714137	G G	GGTAGCAT others(7): Show GGTAGCATGAGTACT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18972.hp2 NA18972.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0000 a0002c0002t0002g0000	1	408	0.0025	14	c.-31 others(25): Show c.-3134_-3121dupAGTACTCATGCTAC	CTAGE9	ENSG00000236761.6	transcript	ENST00000314099.10	protein_coding		3121		chr6	TogoVar
CTBP1_chr4_1206445_1254130	1220125	C C	CCAGGAAG others(7): Show CCAGGAAGTGGAGGT	intron_variant intron_variant	MODIFIER	NA19068.hp2 NA19068.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0354 a0001c0001t0005g0354	1	422	0.0024	14	c.515 others(31): Show c.515-3934_515-3921dupACCTCCACTTCCTG	CTBP1	ENSG00000159692.18	transcript	ENST00000382952.8	protein_coding	5/9			chr4	TogoVar
CTBP2_chr10_124979317_125033071	124980121	T T	TTGCCTTG others(7): Show TTGCCTTGACATTGC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0001 a0005c0006t0001	a0005c0006t0001g0006 a0005c0006t0001g0006	1	380	0.0026	14	c.93 others(25): Show c.9396_*9397insGCAATGTCAAGGCA	CTBP2	ENSG00000175029.17	transcript	ENST00000309035.11	protein_coding		4195		chr10	TogoVar
CTBP2_chr10_124979317_125033071	124986285	G G	GCACACAC others(7): Show GCACACACACACACA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0004 a0004	a0004c0029 a0004c0029	a0004c0029t0097 a0004c0029t0097	a0004c0029t0097g0260 a0004c0029t0097g0260	1	380	0.0026	14	c.32 others(25): Show c.3232_*3233insTGTGTGTGTGTGTG	CTBP2	ENSG00000175029.17	transcript	ENST00000309035.11	protein_coding	9/9	3232		chr10	TogoVar
CTCF_chr16_67557526_67644177	67580772	A A	ATTTTTTT others(7): Show ATTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG01361.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0168 a0001c0001t0002g0168	1	168	0.0060	14	c.-10 others(31): Show c.-10+9518_-10+9531dupTTTTTTTTTTTTTT	CTCF	ENSG00000102974.16	transcript	ENST00000264010.10	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr16	TogoVar
CTCF_chr16_67557526_67644177	67629746	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG01346.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0100 a0001c0001t0001g0100	1	168	0.0060	14	c.183 others(31): Show c.1837+246_1837+259dupTTTTTTTTTTTTTT	CTCF	ENSG00000102974.16	transcript	ENST00000264010.10	protein_coding	10/11		INFO_REALIGN_3_PRIME	chr16	TogoVar
CTDSP2_chr12_57814927_57851729	57818182	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18954.hp1 NA19083.hp2 NA18954.hp1 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0003 a0001c0001t0001g0004	2	346	0.0058	14	c.54 others(25): Show c.5406_*5419dupAAAAAAAAAAAAAA	CTDSP2	ENSG00000175215.11	transcript	ENST00000398073.7	protein_coding		1744		chr12	TogoVar
CTDSPL2_chr15_44422629_44534038	44444302	T T	TACACACA others(7): Show TACACACACACACAC	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0008 a0001c0003t0008	a0001c0003t0008g0063 a0001c0003t0008g0063	1	234	0.0043	14	c.-24 others(33): Show c.-24-14663_-24-14650dupCACACACACACACA	CTDSPL2	ENSG00000137770.14	transcript	ENST00000260327.9	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr15	TogoVar
CTDSPL2_chr15_44422629_44534038	44444836	G G	GTTTTTTT others(7): Show GTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG03098.hp2 HG02602.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0011 a0001c0001t0003 a0001c0001t0011	a0001c0001t0003g0004 a0001c0001t0011g0054 a0001c0001t0003g0004 a0001c0001t0011g0054	2	234	0.0086	14	c.-24 others(33): Show c.-24-14138_-24-14125dupTTTTTTTTTTTTTT	CTDSPL2	ENSG00000137770.14	transcript	ENST00000260327.9	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr15	TogoVar
CTDSPL2_chr15_44422629_44534038	44462700	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02886.hp1 HG03471.hp2 others(4): Show HG02630.hp2 HG02886.hp1 HG03471.hp2 HG06807.hp1 NA18906.hp2 NA19063.hp2 NA20300.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0005 a0001c0003t0008 a0001c0003t0010 a0001c0002t0005 a0001c0003t0008 a0001c0003t0010	a0001c0002t0005g0044 a0001c0003t0008g0058 a0001c0003t0008g0061 others(4): Show a0001c0002t0005g0044 a0001c0003t0008g0058 a0001c0003t0008g0061 a0001c0003t0008g0062 a0001c0003t0008g0063 a0001c0003t0010g0055 a0001c0003t0010g0057	7	234	0.0299	14	c.186 others(31): Show c.186+3511_186+3524dupTTTTTTTTTTTTTT	CTDSPL2	ENSG00000137770.14	transcript	ENST00000260327.9	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr15	TogoVar
CTDSPL2_chr15_44422629_44534038	44506412	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0019 a0001c0001t0003g0019	1	234	0.0043	14	c.969 others(31): Show c.969+6607_969+6620dupTTTTTTTTTTTTTT	CTDSPL2	ENSG00000137770.14	transcript	ENST00000260327.9	protein_coding	8/12		INFO_REALIGN_3_PRIME	chr15	TogoVar
CTHRC1_chr8_103366538_103387989	103387256	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp2 HG01361.hp2 HG03831.hp2 HG00639.hp2 HG01361.hp2 HG03831.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0013 a0001c0002t0001g0025 a0001c0002t0001g0043 a0001c0002t0001g0013 a0001c0002t0001g0025 a0001c0002t0001g0043	3	408	0.0074	14	c.46 others(25): Show c.4656_*4657insAAAAAAAAAAAAAA	CTHRC1	ENSG00000164932.13	transcript	ENST00000330295.10	protein_coding		4268		chr8	TogoVar
CTIF_chr18_48534031_48868217	48563212	T T	TGACACCC others(7): Show TGACACCCAGCCTCC	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00621.hp2 HG00639.hp1 others(66): Show HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00735.hp2 HG01069.hp1 HG01081.hp2 HG01109.hp1 HG01243.hp1 HG01243.hp2 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01884.hp2 HG01934.hp2 HG01952.hp2 HG02055.hp2 HG02080.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02451.hp2 HG02559.hp2 HG02572.hp1 HG02602.hp2 HG02698.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG03098.hp1 HG03130.hp2 HG03195.hp2 HG03453.hp1 HG03490.hp2 HG03540.hp2 HG03654.hp2 HG03710.hp2 HG04115.hp1 HG04115.hp2 HG06807.hp1 HG06807.hp2 NA18747.hp1 NA18747.hp2 NA18945.hp2 NA18952.hp2 NA18972.hp1 NA18972.hp2 NA19011.hp1 NA19011.hp2 NA19043.hp1 NA19068.hp2 NA19240.hp1 NA20129.hp1 NA20300.hp2 NA20905.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0006	a0001c0001 a0001c0002 a0001c0003 others(7): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0009 a0001c0011 a0001c0014 a0002c0004 a0005c0010 a0006c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(35): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0017 a0001c0001t0018 a0001c0001t0020 a0001c0001t0022 a0001c0001t0024 a0001c0001t0026 a0001c0001t0030 a0001c0001t0032 a0001c0001t0033 a0001c0001t0035 a0001c0001t0036 a0001c0001t0047 a0001c0001t0053 a0001c0001t0054 a0001c0002t0001 a0001c0002t0002 a0001c0002t0029 a0001c0003t0001 a0001c0005t0001 a0001c0009t0041 a0001c0011t0013 a0001c0014t0028 a0002c0004t0010 a0002c0004t0014 a0002c0004t0024 a0005c0010t0001 a0006c0006t0001	a0001c0001t0001g0032 a0001c0001t0001g0074 a0001c0001t0001g0075 others(66): Show a0001c0001t0001g0032 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0077 a0001c0001t0001g0081 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0096 a0001c0001t0001g0105 a0001c0001t0001g0120 a0001c0001t0002g0025 a0001c0001t0002g0097 a0001c0001t0002g0101 a0001c0001t0002g0102 a0001c0001t0003g0030 a0001c0001t0003g0064 a0001c0001t0003g0098 a0001c0001t0004g0024 a0001c0001t0004g0026 a0001c0001t0004g0055 a0001c0001t0004g0059 a0001c0001t0004g0082 a0001c0001t0005g0104 a0001c0001t0005g0109 a0001c0001t0006g0001 a0001c0001t0006g0060 a0001c0001t0006g0063 a0001c0001t0008g0023 a0001c0001t0009g0003 a0001c0001t0009g0076 a0001c0001t0010g0078 a0001c0001t0010g0093 a0001c0001t0011g0115 a0001c0001t0012g0090 a0001c0001t0012g0091 a0001c0001t0012g0122 a0001c0001t0017g0100 a0001c0001t0017g0112 a0001c0001t0018g0065 a0001c0001t0020g0057 a0001c0001t0022g0009 a0001c0001t0022g0056 a0001c0001t0024g0107 a0001c0001t0026g0061 a0001c0001t0030g0108 a0001c0001t0032g0033 a0001c0001t0033g0092 a0001c0001t0035g0058 a0001c0001t0036g0069 a0001c0001t0047g0031 a0001c0001t0053g0062 a0001c0001t0054g0094 a0001c0002t0001g0106 a0001c0002t0002g0103 a0001c0002t0029g0110 a0001c0003t0001g0035 a0001c0003t0001g0080 a0001c0003t0001g0116 a0001c0003t0001g0121 a0001c0005t0001g0079 a0001c0009t0041g0131 a0001c0011t0013g0086 a0001c0014t0028g0095 a0002c0004t0010g0085 a0002c0004t0014g0114 a0002c0004t0024g0113 a0005c0010t0001g0111 a0006c0006t0001g0099	69	144	0.4792	14	c.-29 others(33): Show c.-29+23901_-29+23914dupGACACCCAGCCTCC	CTIF	ENSG00000134030.14	transcript	ENST00000256413.8	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CTIF_chr18_48534031_48868217	48568633	T T	TAAAAAAA others(7): Show TAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0112 a0001c0001t0017g0112	1	144	0.0069	14	c.-29 others(33): Show c.-29+29334_-29+29335insGAAAAAAAAAAAAA	CTIF	ENSG00000134030.14	transcript	ENST00000256413.8	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CTIF_chr18_48534031_48868217	48645278	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02132.hp2 HG02135.hp1 HG03486.hp1 others(5): Show HG02132.hp2 HG02135.hp1 HG03486.hp1 HG03540.hp2 HG03710.hp2 NA18906.hp1 NA19030.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0015 a0001c0001t0025 a0001c0001t0027 others(5): Show a0001c0001t0015 a0001c0001t0025 a0001c0001t0027 a0001c0001t0032 a0001c0001t0054 a0002c0004t0014 a0002c0004t0016 a0002c0004t0024	a0001c0001t0015g0083 a0001c0001t0025g0011 a0001c0001t0027g0034 others(5): Show a0001c0001t0015g0083 a0001c0001t0025g0011 a0001c0001t0027g0034 a0001c0001t0032g0033 a0001c0001t0054g0094 a0002c0004t0014g0114 a0002c0004t0016g0012 a0002c0004t0024g0113	8	144	0.0556	14	c.252 others(31): Show c.252+8595_252+8608dupAAAAAAAAAAAAAA	CTIF	ENSG00000134030.14	transcript	ENST00000256413.8	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CTIF_chr18_48534031_48868217	48669790	C C	CATATATA others(7): Show CATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG02132.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0024	a0001c0001t0024g0107 a0001c0001t0024g0107	1	144	0.0069	14	c.432 others(29): Show c.432-877_432-876insATATATATATATAT	CTIF	ENSG00000134030.14	transcript	ENST00000256413.8	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CTIF_chr18_48534031_48868217	48687305	G G	GACACACA others(7): Show GACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02735.hp2 HG03098.hp2 NA19043.hp1 HG02735.hp2 HG03098.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0001t0014 a0001c0002t0042 a0001c0001t0004 a0001c0001t0014 a0001c0002t0042	a0001c0001t0004g0026 a0001c0001t0014g0022 a0001c0002t0042g0050 a0001c0001t0004g0026 a0001c0001t0014g0022 a0001c0002t0042g0050	3	144	0.0208	14	c.507 others(33): Show c.507+16594_507+16607dupACACACACACACAC	CTIF	ENSG00000134030.14	transcript	ENST00000256413.8	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CTNNA1_chr5_138748425_138940034	138823956	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0058 a0001c0002t0002g0058	1	180	0.0056	14	c.589 others(29): Show c.589-557_589-544dupAAAAAAAAAAAAAA	CTNNA1	ENSG00000044115.21	transcript	ENST00000302763.12	protein_coding	5/17		INFO_REALIGN_3_PRIME	chr5	TogoVar
CTNNA1_chr5_138748425_138940034	138825482	G G	GTTTTTTT others(7): Show GTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01070.hp1 HG01074.hp2 others(13): Show HG00639.hp2 HG01070.hp1 HG01074.hp2 HG01081.hp1 HG01361.hp1 HG01516.hp2 HG01884.hp2 HG01891.hp2 HG02257.hp2 HG02630.hp2 HG02738.hp2 HG03453.hp1 HG03654.hp2 NA19002.hp1 NA19057.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0008 a0001c0001 a0001c0005 a0001c0008	a0001c0001t0001 a0001c0005t0001 a0001c0008t0003 a0001c0001t0001 a0001c0005t0001 a0001c0008t0003	a0001c0001t0001g0011 a0001c0001t0001g0101 a0001c0001t0001g0102 others(13): Show a0001c0001t0001g0011 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0118 a0001c0001t0001g0129 a0001c0001t0001g0139 a0001c0001t0001g0153 a0001c0001t0001g0158 a0001c0001t0001g0160 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0171 a0001c0001t0001g0177 a0001c0005t0001g0168 a0001c0008t0003g0030	16	180	0.0889	14	c.858 others(29): Show c.858+686_858+699dupTTTTTTTTTTTTTT	CTNNA1	ENSG00000044115.21	transcript	ENST00000302763.12	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr5	TogoVar
CTNNA1_chr5_138748425_138940034	138905111	A A	AAAATACA others(7): Show AAAATACATACATAC	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0003 a0001c0012t0003	a0001c0012t0003g0019 a0001c0012t0003g0019	1	180	0.0056	14	c.138 others(31): Show c.1389+671_1389+672insAATACATACATACA	CTNNA1	ENSG00000044115.21	transcript	ENST00000302763.12	protein_coding	10/17		INFO_REALIGN_3_PRIME	chr5	TogoVar
CTNNA1_chr5_138748425_138940034	138916177	C C	CAAAAAAA others(7): Show CAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02559.hp2 HG03139.hp2 others(6): Show HG02451.hp2 HG02559.hp2 HG03139.hp2 HG03453.hp1 HG03471.hp2 HG03486.hp2 HG03579.hp2 NA18906.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0008 a0001c0001t0001 a0001c0002t0008	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0009 others(6): Show a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0002t0008g0028	9	180	0.0500	14	c.139 others(33): Show c.1390-1564_1390-1551dupAAAAAAAAAAAAAA	CTNNA1	ENSG00000044115.21	transcript	ENST00000302763.12	protein_coding	10/17		INFO_REALIGN_3_PRIME	chr5	TogoVar
CTNNA2_chr2_79508051_80653780	79536574	A A	AGTATGTG others(7): Show AGTATGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0068 a0001c0007t0001g0068	1	68	0.0147	14	c.-6+ others(31): Show c.-6+23369_-6+23370insATGTGTGTGTGTGT	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	79563161	G G	GTATATAT others(7): Show GTATATATATATATA	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0049 a0001c0002t0001g0049	1	68	0.0147	14	c.-6+ others(31): Show c.-6+49968_-6+49981dupATATATATATATAT	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	79616909	C C	CTTTTTTT others(7): Show CTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG02630.hp2 HG03688.hp1 HG00673.hp2 HG02630.hp2 HG03688.hp1	a0001 a0001	a0001c0003 a0001c0005 a0001c0014 a0001c0003 a0001c0005 a0001c0014	a0001c0003t0002 a0001c0005t0002 a0001c0014t0001 a0001c0003t0002 a0001c0005t0002 a0001c0014t0001	a0001c0003t0002g0008 a0001c0005t0002g0009 a0001c0014t0001g0016 a0001c0003t0002g0008 a0001c0005t0002g0009 a0001c0014t0001g0016	3	68	0.0441	14	c.-5- others(31): Show c.-5-34634_-5-34633insTTTTTTTTTTTTTT	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr2	TogoVar

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