regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LARS2_chr3_45383576_45554407 | 45484618 | A | ATATATAT others(8): Show |
intron_variant | MODIFIER | HG00733.hp1 HG01255.hp1 NA18952.hp2 |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0010 | a0001c0002t0001g0060a0001c0002t0001g0195a0001c0002t0010g0101 | 3 | 242 | 0.0124 | 15 | c.101 others(34): Show |
LARS2 | ENSG00000011376.12 | transcript | ENST00000645846.2 | protein_coding | 10/21 | chr3 | TogoVar | ||||||
LARS2_chr3_45383576_45554407 | 45484620 | A | ATATATAT others(8): Show |
intron_variant | MODIFIER | HG00673.hp2 HG01169.hp1 HG03017.hp1 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0050a0001c0002t0001g0107a0001c0002t0001g0227 | 3 | 242 | 0.0124 | 15 | c.101 others(34): Show |
LARS2 | ENSG00000011376.12 | transcript | ENST00000645846.2 | protein_coding | 10/21 | chr3 | TogoVar | ||||||
LARS2_chr3_45383576_45554407 | 45484622 | A | ATATATAT others(8): Show |
intron_variant | MODIFIER | HG01515.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0241 | 1 | 242 | 0.0041 | 15 | c.101 others(34): Show |
LARS2 | ENSG00000011376.12 | transcript | ENST00000645846.2 | protein_coding | 10/21 | chr3 | TogoVar | ||||||
LASP1_chr17_38865058_38926770 | 38910733 | C | CTTTTTTT others(8): Show |
intron_variant | MODIFIER | HG00408.hp2 HG00544.hp1 HG00609.hp1 others(98): Show |
a0001 | a0001c0001a0001c0003a0001c0004others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(16): Show | a0001c0001t0001g0037a0001c0001t0001g0038a0001c0001t0001g0040others(96): Show | 101 | 396 | 0.2551 | 15 | c.358 others(32): Show |
LASP1 | ENSG00000002834.19 | transcript | ENST00000318008.11 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
LASP1_chr17_38865058_38926770 | 38919031 | G | GAAGGGCG others(8): Show |
3_prime_UTR_variant | MODIFIER | HG00621.hp1 HG02015.hp2 HG02129.hp2 others(7): Show |
a0001 | a0001c0002a0001c0003a0001c0006 | a0001c0002t0005a0001c0003t0005a0001c0006t0005others(1): Show | a0001c0002t0005g0194a0001c0002t0005g0198a0001c0003t0005g0215others(7): Show | 10 | 396 | 0.0253 | 15 | c.*25 others(24): Show |
LASP1 | ENSG00000002834.19 | transcript | ENST00000318008.11 | protein_coding | 7/7 | 254 | chr17 | TogoVar | |||||
LASP1_chr17_38865058_38926770 | 38919033 | A | AGGGCGAG others(8): Show |
3_prime_UTR_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(298): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(12): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(48): Show | a0001c0001t0001g0011a0001c0001t0001g0037a0001c0001t0001g0038others(295): Show | 301 | 396 | 0.7601 | 15 | c.*25 others(24): Show |
LASP1 | ENSG00000002834.19 | transcript | ENST00000318008.11 | protein_coding | 7/7 | 258 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||
LATS2_chr13_20968036_21066586 | 20969697 | A | AAATATAT others(8): Show |
downstream_gene_variant | MODIFIER | HG01257.hp2 | a0003 | a0003c0003 | a0003c0003t0007 | a0003c0003t0007g0313 | 1 | 316 | 0.0032 | 15 | c.*51 others(26): Show |
LATS2 | ENSG00000150457.9 | transcript | ENST00000382592.5 | protein_coding | 3338 | chr13 | TogoVar | ||||||
LATS2_chr13_20968036_21066586 | 20969898 | C | CAAAAAAA others(8): Show |
downstream_gene_variant | MODIFIER | HG02615.hp1 | a0004 | a0004c0015 | a0004c0015t0005 | a0004c0015t0005g0083 | 1 | 316 | 0.0032 | 15 | c.*49 others(26): Show |
LATS2 | ENSG00000150457.9 | transcript | ENST00000382592.5 | protein_coding | 3137 | chr13 | TogoVar | ||||||
LATS2_chr13_20968036_21066586 | 21007632 | A | ATATATAT others(8): Show |
intron_variant | MODIFIER | NA19043.hp2 | a0004 | a0004c0004 | a0004c0004t0019 | a0004c0004t0019g0026 | 1 | 316 | 0.0032 | 15 | c.343 others(34): Show |
LATS2 | ENSG00000150457.9 | transcript | ENST00000382592.5 | protein_coding | 2/7 | chr13 | TogoVar | ||||||
LATS2_chr13_20968036_21066586 | 21007701 | T | TGTATATA others(8): Show |
intron_variant | MODIFIER | HG02258.hp2 HG03209.hp2 |
a0004 | a0004c0004 | a0004c0004t0019a0004c0004t0030 | a0004c0004t0019g0292a0004c0004t0030g0295 | 2 | 316 | 0.0063 | 15 | c.343 others(34): Show |
LATS2 | ENSG00000150457.9 | transcript | ENST00000382592.5 | protein_coding | 2/7 | chr13 | TogoVar | ||||||
LATS2_chr13_20968036_21066586 | 21007723 | G | GTATATAT others(8): Show |
intron_variant | MODIFIER | HG02647.hp1 | a0010 | a0010c0018 | a0010c0018t0010 | a0010c0018t0010g0066 | 1 | 316 | 0.0032 | 15 | c.343 others(34): Show |
LATS2 | ENSG00000150457.9 | transcript | ENST00000382592.5 | protein_coding | 2/7 | chr13 | TogoVar | ||||||
LATS2_chr13_20968036_21066586 | 21010201 | A | AAACAAAC others(8): Show |
intron_variant | MODIFIER | HG01515.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0227 | 1 | 316 | 0.0032 | 15 | c.343 others(34): Show |
LATS2 | ENSG00000150457.9 | transcript | ENST00000382592.5 | protein_coding | 2/7 | chr13 | TogoVar | ||||||
LATS2_chr13_20968036_21066586 | 21062924 | C | CAAAAAAA others(8): Show |
upstream_gene_variant | MODIFIER | HG02083.hp2 HG02148.hp2 |
a0002 | a0002c0002 | a0002c0002t0003 | a0002c0002t0003g0148a0002c0002t0003g0154 | 2 | 316 | 0.0063 | 15 | c.-17 others(26): Show |
LATS2 | ENSG00000150457.9 | transcript | ENST00000382592.5 | protein_coding | 1339 | chr13 | TogoVar | ||||||
LAX1_chr1_203760183_203781372 | 203767303 | C | CTTTTTTT others(8): Show |
intron_variant | MODIFIER | HG00558.hp1 HG00558.hp2 HG00609.hp2 others(24): Show |
a0001a0004a0008 | a0001c0001a0001c0002a0001c0008others(2): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0009others(6): Show | a0001c0001t0001g0002a0001c0001t0001g0009a0001c0001t0001g0100others(22): Show | 27 | 422 | 0.0640 | 15 | c.89+ others(30): Show |
LAX1 | ENSG00000122188.13 | transcript | ENST00000442561.7 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LAX1_chr1_203760183_203781372 | 203769397 | A | AAAGAAAG others(8): Show |
intron_variant | MODIFIER | NA18995.hp2 NA19009.hp2 |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0014a0002c0004t0013 | a0001c0001t0014g0059a0002c0004t0013g0060 | 2 | 422 | 0.0047 | 15 | c.90- others(30): Show |
LAX1 | ENSG00000122188.13 | transcript | ENST00000442561.7 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LAX1_chr1_203760183_203781372 | 203769454 | A | AAAGAAAG others(8): Show |
intron_variant | MODIFIER | HG01496.hp1 HG02965.hp1 |
a0001a0005 | a0001c0001a0005c0012 | a0001c0001t0003a0005c0012t0003 | a0001c0001t0003g0349a0005c0012t0003g0348 | 2 | 422 | 0.0047 | 15 | c.90- others(30): Show |
LAX1 | ENSG00000122188.13 | transcript | ENST00000442561.7 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LAX1_chr1_203760183_203781372 | 203769455 | A | AAGAAAGG others(8): Show |
intron_variant | MODIFIER | HG01891.hp1 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0381 | 1 | 422 | 0.0024 | 15 | c.90- others(30): Show |
LAX1 | ENSG00000122188.13 | transcript | ENST00000442561.7 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LAX1_chr1_203760183_203781372 | 203770457 | G | GAGAGAGA others(8): Show |
intron_variant | MODIFIER | HG01261.hp2 NA20752.hp2 |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0310a0001c0001t0003g0365 | 2 | 422 | 0.0047 | 15 | c.90- others(28): Show |
LAX1 | ENSG00000122188.13 | transcript | ENST00000442561.7 | protein_coding | 1/4 | chr1 | TogoVar | ||||||
LBP_chr20_38341482_38382013 | 38348746 | A | AAGTTTAG others(8): Show |
intron_variant | MODIFIER | HG00408.hp2 HG01346.hp1 HG02155.hp2 others(13): Show |
a0002a0005a0012others(2): Show | a0002c0007a0005c0006a0012c0017others(2): Show | a0002c0007t0001a0005c0006t0001a0012c0017t0003others(2): Show | a0002c0007t0001g0011a0002c0007t0001g0034a0002c0007t0001g0035others(11): Show | 16 | 394 | 0.0406 | 15 | c.125 others(30): Show |
LBP | ENSG00000129988.6 | transcript | ENST00000217407.3 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
LBP_chr20_38341482_38382013 | 38348782 | A | AGTTTTGT others(8): Show |
intron_variant | MODIFIER | HG03486.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0309 | 1 | 394 | 0.0025 | 15 | c.125 others(30): Show |
LBP | ENSG00000129988.6 | transcript | ENST00000217407.3 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
LBP_chr20_38341482_38382013 | 38348787 | A | AGTTTAGT others(8): Show |
intron_variant | MODIFIER | HG00438.hp1 HG01261.hp2 HG01496.hp2 others(52): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0002a0002c0010others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(5): Show | a0001c0001t0001g0006a0001c0001t0001g0007a0001c0001t0001g0019others(46): Show | 55 | 394 | 0.1396 | 15 | c.125 others(30): Show |
LBP | ENSG00000129988.6 | transcript | ENST00000217407.3 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
LBP_chr20_38341482_38382013 | 38348787 | A | AGTTTAGT others(8): Show |
intron_variant | MODIFIER | HG01106.hp1 HG01981.hp1 HG01981.hp2 others(6): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0252a0001c0001t0001g0253a0001c0001t0001g0254others(5): Show | 9 | 394 | 0.0228 | 15 | c.125 others(30): Show |
LBP | ENSG00000129988.6 | transcript | ENST00000217407.3 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
LBP_chr20_38341482_38382013 | 38348787 | A | AGTTTTGT others(8): Show |
intron_variant | MODIFIER | NA19007.hp1 NA19084.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0291a0001c0001t0001g0292 | 2 | 394 | 0.0051 | 15 | c.125 others(30): Show |
LBP | ENSG00000129988.6 | transcript | ENST00000217407.3 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
LCA5L_chr21_39400728_39450778 | 39428599 | T | TATATATA others(8): Show |
intron_variant | MODIFIER | HG01496.hp2 HG02257.hp2 HG02970.hp2 others(2): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0005a0002c0002t0002others(1): Show | a0001c0001t0001g0127a0001c0001t0005g0167a0002c0002t0002g0250others(2): Show | 5 | 340 | 0.0147 | 15 | c.-10 others(28): Show |
LCA5L | ENSG00000157578.14 | transcript | ENST00000288350.8 | protein_coding | 4/10 | chr21 | TogoVar | ||||||
LCA5_chr6_79479991_79542430 | 79538018 | G | GTTTTTTT others(8): Show |
upstream_gene_variant | MODIFIER | HG00733.hp1 HG01106.hp2 HG02922.hp2 others(2): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0002a0001c0001t0007a0003c0003t0004 | a0001c0001t0002g0210a0001c0001t0007g0008a0003c0003t0004g0005others(2): Show | 5 | 400 | 0.0125 | 15 | c.-10 others(26): Show |
LCA5 | ENSG00000135338.14 | transcript | ENST00000369846.9 | protein_coding | 589 | chr6 | TogoVar | ||||||
LCE1D_chr1_152791721_152803181 | 152800827 | T | TACAGATA others(8): Show |
downstream_gene_variant | MODIFIER | HG02622.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003 | 1 | 380 | 0.0026 | 15 | c.*26 others(26): Show |
LCE1D | ENSG00000172155.10 | transcript | ENST00000326233.7 | protein_coding | 2647 | chr1 | TogoVar | ||||||
LCLAT1_chr2_30442246_30649225 | 30466229 | T | TTTTTCTT others(8): Show |
intron_variant | MODIFIER | HG01952.hp2 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0064 | 1 | 366 | 0.0027 | 15 | c.-5+ others(32): Show |
LCLAT1 | ENSG00000172954.14 | transcript | ENST00000379509.8 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
LCLAT1_chr2_30442246_30649225 | 30639383 | T | TGACTGCT others(8): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(332): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0001c0008others(7): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(77): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0129others(331): Show | 335 | 366 | 0.9153 | 15 | c.629 others(30): Show |
LCLAT1 | ENSG00000172954.14 | transcript | ENST00000379509.8 | protein_coding | 5/5 | chr2 | TogoVar | ||||||
LCLAT1_chr2_30442246_30649225 | 30643121 | T | TCACCTCA others(8): Show |
3_prime_UTR_variant | MODIFIER | HG03490.hp2 HG03492.hp1 |
a0002 | a0002c0002 | a0002c0002t0022 | a0002c0002t0022g0034a0002c0002t0022g0061 | 2 | 366 | 0.0055 | 15 | c.*25 others(26): Show |
LCLAT1 | ENSG00000172954.14 | transcript | ENST00000379509.8 | protein_coding | 6/6 | 2506 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||
LCLAT1_chr2_30442246_30649225 | 30643121 | T | TCACCTCA others(8): Show |
3_prime_UTR_variant | MODIFIER | HG00280.hp2 HG00558.hp1 HG00558.hp2 others(74): Show |
a0001a0002a0004others(2): Show | a0001c0001a0001c0010a0002c0002others(3): Show | a0001c0001t0016a0001c0001t0030a0001c0001t0031others(25): Show | a0001c0001t0016g0014a0001c0001t0016g0015a0001c0001t0016g0017others(73): Show | 77 | 366 | 0.2104 | 15 | c.*25 others(26): Show |
LCLAT1 | ENSG00000172954.14 | transcript | ENST00000379509.8 | protein_coding | 6/6 | 2506 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||
LCMT2_chr15_43318649_43335573 | 43334664 | T | TATATATA others(8): Show |
upstream_gene_variant | MODIFIER | NA19011.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0000 | 1 | 410 | 0.0024 | 15 | c.-41 others(26): Show |
LCMT2 | ENSG00000168806.8 | transcript | ENST00000305641.7 | protein_coding | 4092 | chr15 | TogoVar | ||||||
LCN1_chr9_135516440_135531540 | 135529097 | A | AAAAATAA others(8): Show |
downstream_gene_variant | MODIFIER | NA18973.hp1 NA18973.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001a0001c0001t0001g0002 | 2 | 436 | 0.0046 | 15 | c.*27 others(26): Show |
LCN1 | ENSG00000160349.10 | transcript | ENST00000371781.4 | protein_coding | 2558 | chr9 | TogoVar | ||||||
LCORL_chr4_17836187_18026755 | 17858729 | A | AAATAATA others(8): Show |
intron_variant | MODIFIER | HG01109.hp2 HG01243.hp1 HG01884.hp1 |
a0007 | a0007c0008 | a0007c0008t0013 | a0007c0008t0013g0217a0007c0008t0013g0218a0007c0008t0013g0219 | 3 | 292 | 0.0103 | 15 | c.560 others(36): Show |
LCORL | ENSG00000178177.17 | transcript | ENST00000635767.2 | protein_coding | 7/7 | chr4 | TogoVar | ||||||
LCORL_chr4_17836187_18026755 | 17917940 | A | AAAAACAA others(8): Show |
intron_variant | MODIFIER | HG02055.hp2 NA19043.hp1 |
a0004 | a0004c0005 | a0004c0005t0008 | a0004c0005t0008g0281a0004c0005t0008g0282 | 2 | 292 | 0.0069 | 15 | c.431 others(32): Show |
LCORL | ENSG00000178177.17 | transcript | ENST00000635767.2 | protein_coding | 4/7 | chr4 | TogoVar | ||||||
LCOR_chr10_96827298_97000956 | 96845449 | C | CTTTTTTT others(8): Show |
intron_variant | MODIFIER | HG01099.hp2 HG02074.hp1 |
a0001a0003 | a0001c0004a0003c0003 | a0001c0004t0089a0003c0003t0090 | a0001c0004t0089g0055a0003c0003t0090g0054 | 2 | 288 | 0.0069 | 15 | c.-33 others(36): Show |
LCOR | ENSG00000196233.14 | transcript | ENST00000421806.4 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
LCOR_chr10_96827298_97000956 | 96888363 | C | CAAAAAAA others(8): Show |
intron_variant | MODIFIER | HG00639.hp1 HG02258.hp2 HG02280.hp1 |
a0001 | a0001c0001 | a0001c0001t0016a0001c0001t0022a0001c0001t0067 | a0001c0001t0016g0004a0001c0001t0022g0143a0001c0001t0067g0138 | 3 | 288 | 0.0104 | 15 | c.-32 others(36): Show |
LCOR | ENSG00000196233.14 | transcript | ENST00000421806.4 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
LCOR_chr10_96827298_97000956 | 96970598 | C | CATTTTAT others(8): Show |
intron_variant | MODIFIER | HG00323.hp1 HG00558.hp1 HG00642.hp1 others(20): Show |
a0002a0004a0005 | a0002c0002a0004c0005a0004c0009others(1): Show | a0002c0002t0001a0002c0002t0009a0002c0002t0014others(17): Show | a0002c0002t0001g0078a0002c0002t0009g0111a0002c0002t0014g0065others(20): Show | 23 | 288 | 0.0799 | 15 | c.333 others(34): Show |
LCOR | ENSG00000196233.14 | transcript | ENST00000421806.4 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
LCOR_chr10_96827298_97000956 | 96989695 | A | ATATATAT others(8): Show |
3_prime_UTR_variant | MODIFIER | HG02647.hp2 NA19074.hp2 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0056a0002c0002t0130 | a0001c0001t0056g0284a0002c0002t0130g0066 | 2 | 288 | 0.0069 | 15 | c.*45 others(26): Show |
LCOR | ENSG00000196233.14 | transcript | ENST00000421806.4 | protein_coding | 8/8 | 4563 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||
LCOR_chr10_96827298_97000956 | 96989695 | A | ATATATAT others(8): Show |
3_prime_UTR_variant | MODIFIER | HG02809.hp2 | a0002 | a0002c0002 | a0002c0002t0058 | a0002c0002t0058g0107 | 1 | 288 | 0.0035 | 15 | c.*45 others(26): Show |
LCOR | ENSG00000196233.14 | transcript | ENST00000421806.4 | protein_coding | 8/8 | 4563 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||
LCP2_chr5_170241233_170302777 | 170272597 | C | CTTTTTTT others(8): Show |
intron_variant | MODIFIER | HG03471.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0281 | 1 | 384 | 0.0026 | 15 | c.324 others(32): Show |
LCP2 | ENSG00000043462.13 | transcript | ENST00000046794.10 | protein_coding | 6/20 | chr5 | TogoVar | ||||||
LCP2_chr5_170241233_170302777 | 170290840 | T | TATAACTT others(8): Show |
intron_variant | MODIFIER | HG00639.hp2 HG02055.hp1 HG02922.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0253a0001c0001t0001g0257a0001c0001t0001g0258others(1): Show | 4 | 384 | 0.0104 | 15 | c.141 others(32): Show |
LCP2 | ENSG00000043462.13 | transcript | ENST00000046794.10 | protein_coding | 2/20 | chr5 | TogoVar | ||||||
LCTL_chr15_66542532_66570998 | 66544724 | T | TGTGTGTG others(8): Show |
downstream_gene_variant | MODIFIER | HG01167.hp1 HG01169.hp1 HG02622.hp2 others(1): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0013 | a0001c0001t0001g0012a0001c0001t0001g0119a0002c0002t0013g0069 | 4 | 434 | 0.0092 | 15 | c.*37 others(26): Show |
LCTL | ENSG00000188501.12 | transcript | ENST00000695545.1 | protein_coding | 2807 | chr15 | TogoVar | ||||||
LCTL_chr15_66542532_66570998 | 66544724 | T | TTTGTGTG others(8): Show |
downstream_gene_variant | MODIFIER | HG02258.hp2 HG02559.hp2 HG03041.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0012a0001c0001t0001g0051 | 4 | 434 | 0.0092 | 15 | c.*37 others(26): Show |
LCTL | ENSG00000188501.12 | transcript | ENST00000695545.1 | protein_coding | 2807 | chr15 | TogoVar | ||||||
LCTL_chr15_66542532_66570998 | 66544724 | T | TTTTTGTG others(8): Show |
downstream_gene_variant | MODIFIER | HG02976.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0012 | 1 | 434 | 0.0023 | 15 | c.*37 others(26): Show |
LCTL | ENSG00000188501.12 | transcript | ENST00000695545.1 | protein_coding | 2807 | chr15 | TogoVar | ||||||
LCTL_chr15_66542532_66570998 | 66544759 | T | TGTGTGTG others(8): Show |
downstream_gene_variant | MODIFIER | NA18966.hp1 NA18966.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001a0001c0001t0001g0023 | 2 | 434 | 0.0046 | 15 | c.*37 others(26): Show |
LCTL | ENSG00000188501.12 | transcript | ENST00000695545.1 | protein_coding | 2772 | chr15 | TogoVar | ||||||
LCT_chr2_135782850_135842184 | 135795604 | C | CTAATAAT others(8): Show |
intron_variant | MODIFIER | HG01993.hp1 HG02280.hp2 HG02486.hp1 others(11): Show |
a0002a0003 | a0002c0002a0003c0007 | a0002c0002t0001a0002c0002t0005a0003c0007t0001 | a0002c0002t0001g0142a0002c0002t0001g0143a0002c0002t0001g0144others(11): Show | 14 | 366 | 0.0383 | 15 | c.497 others(32): Show |
LCT | ENSG00000115850.10 | transcript | ENST00000264162.7 | protein_coding | 13/16 | chr2 | TogoVar | ||||||
LDAF1_chr16_21153674_21185616 | 21167696 | G | GTTTTTTT others(8): Show |
intron_variant | MODIFIER | HG00438.hp1 HG02080.hp1 HG02155.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0191a0001c0001t0001g0192a0001c0001t0001g0196others(2): Show | 5 | 390 | 0.0128 | 15 | c.97- others(30): Show |
LDAF1 | ENSG00000011638.11 | transcript | ENST00000233047.9 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
LDAF1_chr16_21153674_21185616 | 21167696 | G | GTTTTTTT others(8): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(141): Show |
a0001 | a0001c0001a0001c0005a0001c0007 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0005others(65): Show | 144 | 390 | 0.3692 | 15 | c.97- others(30): Show |
LDAF1 | ENSG00000011638.11 | transcript | ENST00000233047.9 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
LDB2_chr4_16496541_16903645 | 16717187 | A | AATAATAA others(8): Show |
intron_variant | MODIFIER | HG02818.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0013 | 1 | 162 | 0.0062 | 15 | c.235 others(34): Show |
LDB2 | ENSG00000169744.13 | transcript | ENST00000304523.10 | protein_coding | 2/7 | chr4 | TogoVar | ||||||
LDB2_chr4_16496541_16903645 | 16717187 | A | AATAATAA others(8): Show |
intron_variant | MODIFIER | NA21309.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0047 | 1 | 162 | 0.0062 | 15 | c.235 others(34): Show |
LDB2 | ENSG00000169744.13 | transcript | ENST00000304523.10 | protein_coding | 2/7 | chr4 | TogoVar |