view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LIMD1_chr3_45589751_45691341 | 45686663 | A | ATATATTT others(8): Show |
downstream_gene_variant | MODIFIER | HG03098.hp1 NA19007.hp2 NA19010.hp1 |
a0001 | a0001c0001 | a0001c0001t0015a0001c0001t0148a0001c0001t0169 | a0001c0001t0015g0261 a0001c0001t0148g0026 a0001c0001t0169g0258 |
3 | 358 | 0.0084 | 15 | c.*96 others(26): Show |
LIMD1 | ENSG00000144791.10 | transcript | ENST00000273317.5 | protein_coding | 323 | chr3 | TogoVar | |||||||
LIMD1_chr3_45589751_45691341 | 45686663 | A | ATATTTTT others(8): Show |
downstream_gene_variant | MODIFIER | HG00597.hp1 NA18747.hp2 NA19012.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0015a0001c0001t0018a0001c0001t0166others(1): Show | a0001c0001t0015g0260 a0001c0001t0018g0054 a0001c0001t0166g0263 others(1): Show |
4 | 358 | 0.0112 | 15 | c.*96 others(26): Show |
LIMD1 | ENSG00000144791.10 | transcript | ENST00000273317.5 | protein_coding | 323 | chr3 | TogoVar | |||||||
LIMK2_chr22_31207298_31285080 | 31226178 | C | CTTATTTT others(8): Show |
intron_variant | MODIFIER | HG02965.hp2 NA18975.hp2 NA20129.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0015a0001c0001t0021 | a0001c0001t0001g0142 a0001c0001t0015g0008 a0001c0001t0021g0262 |
3 | 358 | 0.0084 | 15 | c.116 others(30): Show |
LIMK2 | ENSG00000182541.18 | transcript | ENST00000331728.9 | protein_coding | 2/15 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
LIMK2_chr22_31207298_31285080 | 31236931 | C | CATAAAAT others(8): Show |
intron_variant | MODIFIER | HG02818.hp2 NA18950.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0155 a0001c0001t0001g0276 |
2 | 358 | 0.0056 | 15 | c.116 others(34): Show |
LIMK2 | ENSG00000182541.18 | transcript | ENST00000331728.9 | protein_coding | 2/15 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
LIMK2_chr22_31207298_31285080 | 31257040 | A | ATTTTTTT others(8): Show |
intron_variant | MODIFIER | HG03491.hp2 HG03492.hp1 |
a0001 | a0001c0003 | a0001c0003t0003 | a0001c0003t0003g0001 | 2 | 358 | 0.0056 | 15 | c.117 others(32): Show |
LIMK2 | ENSG00000182541.18 | transcript | ENST00000331728.9 | protein_coding | 2/15 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
LIMK2_chr22_31207298_31285080 | 31261545 | C | CAAAAAAA others(8): Show |
intron_variant | MODIFIER | HG00544.hp2 HG00609.hp2 HG01884.hp1 others(59): Show |
a0001 | a0001c0001a0001c0007 | a0001c0001t0001a0001c0001t0007a0001c0001t0018others(3): Show | a0001c0001t0001g0004 a0001c0001t0001g0094 a0001c0001t0001g0096 others(58): Show |
62 | 358 | 0.1732 | 15 | c.552 others(30): Show |
LIMK2 | ENSG00000182541.18 | transcript | ENST00000331728.9 | protein_coding | 5/15 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
LIMS1_chr2_108529470_108692246 | 108534261 | G | GCGCCCCG others(8): Show |
upstream_gene_variant | MODIFIER | HG02895.hp1 HG02897.hp2 |
a0001 | a0001c0004 | a0001c0004t0013 | a0001c0004t0013g0073 a0001c0004t0013g0074 |
2 | 246 | 0.0081 | 15 | c.-30 others(24): Show |
LIMS1 | ENSG00000169756.17 | transcript | ENST00000544547.6 | protein_coding | 208 | chr2 | TogoVar | |||||||
LIMS1_chr2_108529470_108692246 | 108600891 | T | TTCTTCTC others(8): Show |
intron_variant | MODIFIER | HG03098.hp2 HG03486.hp2 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0017 | a0001c0001t0002g0083 a0001c0001t0017g0156 |
2 | 246 | 0.0081 | 15 | c.33- others(32): Show |
LIMS1 | ENSG00000169756.17 | transcript | ENST00000544547.6 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
LIMS1_chr2_108529470_108692246 | 108600891 | T | TTCTTTTC others(8): Show |
intron_variant | MODIFIER | HG02572.hp1 HG04184.hp1 NA18954.hp2 others(1): Show |
a0001a0002 | a0001c0002a0002c0003 | a0001c0002t0004a0001c0002t0009a0002c0003t0026 | a0001c0002t0004g0244 a0001c0002t0009g0079 a0001c0002t0009g0081 others(1): Show |
4 | 246 | 0.0163 | 15 | c.33- others(32): Show |
LIMS1 | ENSG00000169756.17 | transcript | ENST00000544547.6 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
LIMS1_chr2_108529470_108692246 | 108667551 | A | AAATATAT others(8): Show |
intron_variant | MODIFIER | HG02717.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0183 | 1 | 246 | 0.0041 | 15 | c.193 others(32): Show |
LIMS1 | ENSG00000169756.17 | transcript | ENST00000544547.6 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
LIN52_chr14_74079956_74206493 | 74130278 | G | GTTTGTTT others(8): Show |
intron_variant | MODIFIER | HG02451.hp2 HG02809.hp2 HG02970.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0014a0001c0002t0009 | a0001c0001t0014g0198 a0001c0001t0014g0199 a0001c0001t0014g0200 others(2): Show |
6 | 354 | 0.0170 | 15 | c.283 others(34): Show |
LIN52 | ENSG00000205659.12 | transcript | ENST00000555028.7 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
LIN52_chr14_74079956_74206493 | 74130278 | G | GTTTTTTT others(8): Show |
intron_variant | MODIFIER | HG03195.hp2 NA18906.hp1 |
a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0349 a0001c0001t0004g0350 |
2 | 354 | 0.0057 | 15 | c.283 others(34): Show |
LIN52 | ENSG00000205659.12 | transcript | ENST00000555028.7 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
LIN52_chr14_74079956_74206493 | 74137498 | C | CTTTTTTT others(8): Show |
intron_variant | MODIFIER | HG02055.hp2 HG02723.hp2 HG02886.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0012a0001c0001t0015 | a0001c0001t0004g0207 a0001c0001t0004g0208 a0001c0001t0012g0209 others(1): Show |
4 | 354 | 0.0113 | 15 | c.283 others(34): Show |
LIN52 | ENSG00000205659.12 | transcript | ENST00000555028.7 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
LIN52_chr14_74079956_74206493 | 74165513 | C | CTTTTCTT others(8): Show |
intron_variant | MODIFIER | HG00738.hp1 HG00741.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0010 | a0001c0001t0001g0110 a0001c0001t0010g0112 |
2 | 354 | 0.0057 | 15 | c.284 others(34): Show |
LIN52 | ENSG00000205659.12 | transcript | ENST00000555028.7 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
LIN52_chr14_74079956_74206493 | 74165513 | C | CTTTTTTT others(8): Show |
intron_variant | MODIFIER | HG01081.hp1 HG02809.hp1 HG02809.hp2 others(6): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0007a0001c0001t0010a0001c0001t0013others(3): Show | a0001c0001t0007g0095 a0001c0001t0007g0107 a0001c0001t0010g0096 others(6): Show |
9 | 354 | 0.0254 | 15 | c.284 others(34): Show |
LIN52 | ENSG00000205659.12 | transcript | ENST00000555028.7 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
LIN52_chr14_74079956_74206493 | 74175020 | A | AAATAATA others(8): Show |
intron_variant | MODIFIER | HG01109.hp2 HG01243.hp2 HG01884.hp2 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(5): Show | a0001c0001t0002g0276 a0001c0001t0003g0024 a0001c0001t0003g0033 others(13): Show |
16 | 354 | 0.0452 | 15 | c.284 others(34): Show |
LIN52 | ENSG00000205659.12 | transcript | ENST00000555028.7 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
LIN54_chr4_82919603_83015823 | 82947235 | A | ATATATAT others(8): Show |
intron_variant | MODIFIER | HG01123.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0117 | 1 | 304 | 0.0033 | 15 | c.952 others(30): Show |
LIN54 | ENSG00000189308.11 | transcript | ENST00000340417.8 | protein_coding | 4/12 | chr4 | TogoVar | |||||||
LIN54_chr4_82919603_83015823 | 82955369 | A | AATAACAT others(8): Show |
intron_variant | MODIFIER | HG00558.hp1 HG00609.hp1 HG00673.hp1 others(34): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0008 a0001c0001t0001g0044 a0001c0001t0001g0088 others(33): Show |
37 | 304 | 0.1217 | 15 | c.952 others(32): Show |
LIN54 | ENSG00000189308.11 | transcript | ENST00000340417.8 | protein_coding | 4/12 | chr4 | TogoVar | |||||||
LIN54_chr4_82919603_83015823 | 82960321 | G | GTTAATTT others(8): Show |
intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00408.hp1 others(300): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0004others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(33): Show | a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0008 others(296): Show |
303 | 304 | 0.9967 | 15 | c.951 others(34): Show |
LIN54 | ENSG00000189308.11 | transcript | ENST00000340417.8 | protein_coding | 4/12 | chr4 | TogoVar | |||||||
LIN54_chr4_82919603_83015823 | 82979939 | C | CAAAAAAA others(8): Show |
intron_variant | MODIFIER | HG01256.hp2 NA18990.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0264 a0001c0001t0002g0273 |
2 | 304 | 0.0066 | 15 | c.685 others(30): Show |
LIN54 | ENSG00000189308.11 | transcript | ENST00000340417.8 | protein_coding | 2/12 | chr4 | TogoVar | |||||||
LIN54_chr4_82919603_83015823 | 83000827 | C | CTTTTTTT others(8): Show |
intron_variant | MODIFIER | HG00140.hp2 HG00408.hp1 HG00423.hp2 others(112): Show |
a0001a0002a0003 | a0001c0001a0001c0004a0002c0005others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(12): Show | a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0008 others(111): Show |
115 | 304 | 0.3783 | 15 | c.-33 others(32): Show |
LIN54 | ENSG00000189308.11 | transcript | ENST00000340417.8 | protein_coding | 1/12 | chr4 | TogoVar | |||||||
LIN54_chr4_82919603_83015823 | 83000827 | C | CTTTTTTT others(8): Show |
intron_variant | MODIFIER | HG02818.hp2 HG02886.hp2 HG02897.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0010a0001c0001t0015others(1): Show | a0001c0001t0002g0204 a0001c0001t0010g0202 a0001c0001t0010g0203 others(2): Show |
5 | 304 | 0.0165 | 15 | c.-33 others(32): Show |
LIN54 | ENSG00000189308.11 | transcript | ENST00000340417.8 | protein_coding | 1/12 | chr4 | TogoVar | |||||||
LIN54_chr4_82919603_83015823 | 83001858 | A | AGAAAAGG others(8): Show |
intron_variant | MODIFIER | NA18994.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0066 | 1 | 304 | 0.0033 | 15 | c.-33 others(32): Show |
LIN54 | ENSG00000189308.11 | transcript | ENST00000340417.8 | protein_coding | 1/12 | chr4 | TogoVar | |||||||
LIN7A_chr12_80787520_80942934 | 80807063 | G | GTTTTTTT others(8): Show |
intron_variant | MODIFIER | HG00558.hp2 HG00609.hp1 HG00642.hp2 others(29): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0024 | a0001c0001t0001g0002 a0001c0001t0001g0035 a0001c0001t0001g0059 others(29): Show |
32 | 292 | 0.1096 | 15 | c.702 others(32): Show |
LIN7A | ENSG00000111052.8 | transcript | ENST00000552864.6 | protein_coding | 5/5 | chr12 | TogoVar | |||||||
LIN7A_chr12_80787520_80942934 | 80807070 | T | TTTGTTTT others(8): Show |
intron_variant | MODIFIER | HG01167.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0148 | 1 | 292 | 0.0034 | 15 | c.702 others(32): Show |
LIN7A | ENSG00000111052.8 | transcript | ENST00000552864.6 | protein_coding | 5/5 | chr12 | TogoVar | |||||||
LIN7A_chr12_80787520_80942934 | 80807072 | T | TGTTTTTT others(8): Show |
intron_variant | MODIFIER | HG00673.hp1 HG02559.hp2 HG02723.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0071 a0001c0001t0001g0090 a0001c0001t0001g0178 others(1): Show |
4 | 292 | 0.0137 | 15 | c.702 others(32): Show |
LIN7A | ENSG00000111052.8 | transcript | ENST00000552864.6 | protein_coding | 5/5 | chr12 | TogoVar | |||||||
LIN7A_chr12_80787520_80942934 | 80807073 | T | TGTTTTTT others(8): Show |
intron_variant | MODIFIER | HG02486.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0219 | 1 | 292 | 0.0034 | 15 | c.702 others(32): Show |
LIN7A | ENSG00000111052.8 | transcript | ENST00000552864.6 | protein_coding | 5/5 | chr12 | TogoVar | |||||||
LIN7A_chr12_80787520_80942934 | 80807077 | T | TTTTTTTT others(8): Show |
intron_variant | MODIFIER | HG01261.hp2 HG03453.hp1 HG03453.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004 | a0001c0001t0001g0253 a0001c0001t0004g0016 a0001c0001t0004g0034 |
3 | 292 | 0.0103 | 15 | c.702 others(32): Show |
LIN7A | ENSG00000111052.8 | transcript | ENST00000552864.6 | protein_coding | 5/5 | chr12 | TogoVar | |||||||
LIN7A_chr12_80787520_80942934 | 80807077 | T | TTTTTTTT others(8): Show |
intron_variant | MODIFIER | HG00323.hp1 HG02056.hp2 HG02630.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0070 a0001c0001t0001g0078 a0001c0001t0001g0107 others(4): Show |
7 | 292 | 0.0240 | 15 | c.702 others(32): Show |
LIN7A | ENSG00000111052.8 | transcript | ENST00000552864.6 | protein_coding | 5/5 | chr12 | TogoVar | |||||||
LIN7A_chr12_80787520_80942934 | 80807077 | T | TTTTTTTT others(8): Show |
intron_variant | MODIFIER | HG00639.hp1 HG02145.hp1 HG02258.hp2 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0012others(1): Show | a0001c0001t0001g0111 a0001c0001t0001g0265 a0001c0001t0004g0027 others(8): Show |
11 | 292 | 0.0377 | 15 | c.702 others(32): Show |
LIN7A | ENSG00000111052.8 | transcript | ENST00000552864.6 | protein_coding | 5/5 | chr12 | TogoVar | |||||||
LIN7A_chr12_80787520_80942934 | 80807080 | T | TTTTTTTT others(8): Show |
intron_variant | MODIFIER | HG02055.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0182 | 1 | 292 | 0.0034 | 15 | c.702 others(32): Show |
LIN7A | ENSG00000111052.8 | transcript | ENST00000552864.6 | protein_coding | 5/5 | chr12 | TogoVar | |||||||
LIN7A_chr12_80787520_80942934 | 80807081 | T | TTTGTTTG others(8): Show |
intron_variant | MODIFIER | HG02451.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0158 | 1 | 292 | 0.0034 | 15 | c.702 others(32): Show |
LIN7A | ENSG00000111052.8 | transcript | ENST00000552864.6 | protein_coding | 5/5 | chr12 | TogoVar | |||||||
LIN7A_chr12_80787520_80942934 | 80807081 | T | TTTTTTTG others(8): Show |
intron_variant | MODIFIER | NA19011.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0019 | 1 | 292 | 0.0034 | 15 | c.702 others(32): Show |
LIN7A | ENSG00000111052.8 | transcript | ENST00000552864.6 | protein_coding | 5/5 | chr12 | TogoVar | |||||||
LIN7A_chr12_80787520_80942934 | 80807083 | T | TTTTTTTT others(8): Show |
intron_variant | MODIFIER | HG01070.hp1 HG01168.hp1 HG01169.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0044 a0001c0001t0001g0074 a0001c0001t0001g0099 others(1): Show |
4 | 292 | 0.0137 | 15 | c.702 others(32): Show |
LIN7A | ENSG00000111052.8 | transcript | ENST00000552864.6 | protein_coding | 5/5 | chr12 | TogoVar | |||||||
LINGO2_chr9_27932617_29218601 | 28526055 | C | CAAAAAAA others(8): Show |
intron_variant | MODIFIER | NA18995.hp2 | a0001 | a0001c0001 | a0001c0001t0017 | a0001c0001t0017g0007 | 1 | 62 | 0.0161 | 15 | c.-31 others(36): Show |
LINGO2 | ENSG00000174482.11 | transcript | ENST00000698399.1 | protein_coding | 3/6 | chr9 | TogoVar | |||||||
LINGO2_chr9_27932617_29218601 | 28699042 | A | AAAAACAA others(8): Show |
intron_variant | MODIFIER | HG01071.hp1 HG02895.hp2 HG02897.hp1 |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0006 | a0001c0001t0004g0022 a0001c0001t0006g0003 a0001c0001t0006g0004 |
3 | 62 | 0.0484 | 15 | c.-39 others(36): Show |
LINGO2 | ENSG00000174482.11 | transcript | ENST00000698399.1 | protein_coding | 2/6 | chr9 | TogoVar | |||||||
LINGO2_chr9_27932617_29218601 | 28890195 | T | TTTTTGTT others(8): Show |
intron_variant | MODIFIER | HG02572.hp1 HG03486.hp2 |
a0001 | a0001c0001a0001c0004 | a0001c0001t0005a0001c0004t0005 | a0001c0001t0005g0059 a0001c0004t0005g0054 |
2 | 62 | 0.0323 | 15 | c.-39 others(36): Show |
LINGO2 | ENSG00000174482.11 | transcript | ENST00000698399.1 | protein_coding | 2/6 | chr9 | TogoVar | |||||||
LINGO2_chr9_27932617_29218601 | 28932107 | A | AAAAATAA others(8): Show |
intron_variant | MODIFIER | HG00408.hp1 HG00438.hp1 HG00597.hp1 others(13): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0018 a0001c0001t0001g0035 a0001c0001t0002g0028 others(13): Show |
16 | 62 | 0.2581 | 15 | c.-39 others(36): Show |
LINGO2 | ENSG00000174482.11 | transcript | ENST00000698399.1 | protein_coding | 2/6 | chr9 | TogoVar | |||||||
LINGO2_chr9_27932617_29218601 | 29047051 | A | AAAAAAAA others(8): Show |
intron_variant | MODIFIER | HG02572.hp1 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0059 | 1 | 62 | 0.0161 | 15 | c.-49 others(36): Show |
LINGO2 | ENSG00000174482.11 | transcript | ENST00000698399.1 | protein_coding | 1/6 | chr9 | TogoVar | |||||||
LINGO2_chr9_27932617_29218601 | 29071154 | T | TTATTGTA others(8): Show |
intron_variant | MODIFIER | HG02809.hp1 NA19074.hp1 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0003a0001c0003t0009 | a0001c0001t0003g0034 a0001c0003t0009g0036 |
2 | 62 | 0.0323 | 15 | c.-49 others(38): Show |
LINGO2 | ENSG00000174482.11 | transcript | ENST00000698399.1 | protein_coding | 1/6 | chr9 | TogoVar | |||||||
LINGO3_chr19_2282164_2313154 | 2308142 | A | AGCCGCCG others(8): Show |
5_prime_UTR_variant | MODIFIER | HG00558.hp1 HG02165.hp1 HG03225.hp1 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0034a0001c0003t0035a0001c0003t0036 | a0001c0001t0034g0039 a0001c0003t0035g0038 a0001c0003t0036g0040 |
3 | 418 | 0.0072 | 15 | c.-11 others(24): Show |
LINGO3 | ENSG00000220008.4 | transcript | ENST00000698372.1 | protein_coding | 1/2 | 16367 | chr19 | TogoVar | ||||||
LINGO3_chr19_2282164_2313154 | 2309336 | C | CTTTTGGT others(8): Show |
upstream_gene_variant | MODIFIER | HG02145.hp2 HG02630.hp2 HG02976.hp2 others(5): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0004a0001c0003t0002a0002c0002t0005others(1): Show | a0001c0001t0004g0175 a0001c0001t0004g0221 a0001c0001t0004g0232 others(4): Show |
8 | 418 | 0.0191 | 15 | c.-13 others(26): Show |
LINGO3 | ENSG00000220008.4 | transcript | ENST00000698372.1 | protein_coding | 1183 | chr19 | TogoVar | |||||||
LINS1_chr15_100561924_100607184 | 100600551 | C | CAAAAAAA others(8): Show |
intron_variant | MODIFIER | HG01109.hp2 HG02615.hp2 HG02922.hp1 others(1): Show |
a0001a0007a0008 | a0001c0001a0007c0008a0008c0013 | a0001c0001t0009a0007c0008t0013a0008c0013t0019 | a0001c0001t0009g0260 a0007c0008t0013g0147 a0007c0008t0013g0148 others(1): Show |
4 | 430 | 0.0093 | 15 | c.-10 others(34): Show |
LINS1 | ENSG00000140471.17 | transcript | ENST00000314742.13 | protein_coding | 1/6 | chr15 | TogoVar | |||||||
LIPA_chr10_89208572_89256775 | 89213292 | T | TAAAGAAA others(8): Show |
downstream_gene_variant | MODIFIER | HG00438.hp1 HG00558.hp2 HG00673.hp2 others(35): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0003others(1): Show | a0001c0001t0001a0002c0002t0001a0003c0003t0001others(1): Show | a0001c0001t0001g0003 a0001c0001t0001g0009 a0001c0001t0001g0011 others(31): Show |
38 | 384 | 0.0990 | 15 | c.*15 others(26): Show |
LIPA | ENSG00000107798.18 | transcript | ENST00000336233.10 | protein_coding | 279 | chr10 | TogoVar | |||||||
LIPA_chr10_89208572_89256775 | 89245973 | T | TTTCACGC others(8): Show |
intron_variant | MODIFIER | NA19055.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0157 | 1 | 384 | 0.0026 | 15 | c.112 others(30): Show |
LIPA | ENSG00000107798.18 | transcript | ENST00000336233.10 | protein_coding | 2/9 | chr10 | TogoVar | |||||||
LIPA_chr10_89208572_89256775 | 89250107 | C | CTTTTTTT others(8): Show |
intron_variant | MODIFIER | HG00642.hp1 HG01109.hp2 HG01243.hp1 others(22): Show |
a0001a0003 | a0001c0001a0003c0003a0003c0005 | a0001c0001t0001a0003c0003t0001a0003c0003t0002others(3): Show | a0001c0001t0001g0302 a0003c0003t0001g0033 a0003c0003t0001g0306 others(19): Show |
25 | 384 | 0.0651 | 15 | c.-2+ others(30): Show |
LIPA | ENSG00000107798.18 | transcript | ENST00000336233.10 | protein_coding | 1/9 | chr10 | TogoVar | |||||||
LIPC_chr15_58426991_58574844 | 58489217 | C | CGGGGGGG others(8): Show |
intron_variant | MODIFIER | HG01192.hp1 HG01256.hp2 HG02015.hp1 others(10): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0002t0001a0001c0003t0001others(9): Show | a0001c0001t0001g0339 a0001c0002t0001g0036 a0001c0003t0001g0261 others(10): Show |
13 | 358 | 0.0363 | 15 | c.89- others(32): Show |
LIPC | ENSG00000166035.11 | transcript | ENST00000299022.10 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
LIPC_chr15_58426991_58574844 | 58489217 | C | CGGTGGGG others(8): Show |
intron_variant | MODIFIER | HG00423.hp1 | a0001 | a0001c0005 | a0001c0005t0003 | a0001c0005t0003g0139 | 1 | 358 | 0.0028 | 15 | c.89- others(32): Show |
LIPC | ENSG00000166035.11 | transcript | ENST00000299022.10 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
LIPC_chr15_58426991_58574844 | 58489218 | G | GGGGGGGG others(8): Show |
intron_variant | MODIFIER | HG02451.hp2 HG02965.hp2 NA19030.hp1 others(1): Show |
a0001a0006 | a0001c0009a0001c0045a0006c0039others(1): Show | a0001c0009t0001a0001c0045t0001a0006c0039t0005others(1): Show | a0001c0009t0001g0322 a0001c0045t0001g0217 a0006c0039t0005g0197 others(1): Show |
4 | 358 | 0.0112 | 15 | c.89- others(32): Show |
LIPC | ENSG00000166035.11 | transcript | ENST00000299022.10 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
LIPF_chr10_88659442_88683814 | 88665737 | A | ATTTTTTT others(8): Show |
intron_variant | MODIFIER | NA20752.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0141 | 1 | 414 | 0.0024 | 15 | c.-12 others(32): Show |
LIPF | ENSG00000182333.15 | transcript | ENST00000238983.9 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr10 | TogoVar |