Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LONP2_chr16_48239300_48362349	48354196	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0048 a0001c0002t0048	a0001c0002t0048g0006 a0001c0002t0048g0006	1	154	0.0065	15	c.24 others(26): Show c.2409_*2423dupTTTTTTTTTTTTTTT	LONP2	ENSG00000102910.14	transcript	ENST00000285737.9	protein_coding	15/15	2424	INFO_REALIGN_3_PRIME	chr16	TogoVar
LONRF1_chr8_12716906_12760526	12751294	A A	ATGGTTTT others(8): Show ATGGTTTTTTTTTGTT	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02559.hp1 HG02109.hp2 HG02559.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0133 a0001c0001t0007g0134 a0001c0001t0007g0133 a0001c0001t0007g0134	2	404	0.0050	15	c.721 others(32): Show c.721+3405_721+3406insAACAAAAAAAAACCA	LONRF1	ENSG00000154359.13	transcript	ENST00000398246.8	protein_coding	1/11			chr8	TogoVar
LONRF1_chr8_12716906_12760526	12751294	A A	ATGTTTTT others(8): Show ATGTTTTTTTTTGTTT	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG01515.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0130 a0001c0001t0001g0130	1	404	0.0025	15	c.721 others(32): Show c.721+3405_721+3406insAAACAAAAAAAAACA	LONRF1	ENSG00000154359.13	transcript	ENST00000398246.8	protein_coding	1/11			chr8	TogoVar
LONRF1_chr8_12716906_12760526	12751294	A A	ATGTTTTT others(8): Show ATGTTTTTTTTTTGTT	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp1 HG00558.hp1 others(92): Show HG00408.hp1 HG00423.hp1 HG00558.hp1 HG00621.hp2 HG00642.hp1 HG00673.hp2 HG00733.hp2 HG00738.hp1 HG00738.hp2 HG01074.hp1 HG01081.hp1 HG01168.hp2 HG01169.hp1 HG01243.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp2 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01928.hp1 HG01934.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG02004.hp1 HG02015.hp2 HG02257.hp2 HG02300.hp1 HG02602.hp1 NA18747.hp2 NA18906.hp1 NA18941.hp2 NA18942.hp1 NA18946.hp1 NA18946.hp2 NA18950.hp1 NA18951.hp1 NA18952.hp2 NA18954.hp1 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18966.hp1 NA18966.hp2 NA18969.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp2 NA18982.hp1 NA18985.hp1 NA18986.hp1 NA18987.hp1 NA18988.hp2 NA18992.hp1 NA18995.hp2 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19001.hp1 NA19002.hp2 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp2 NA19011.hp1 NA19054.hp1 NA19057.hp1 NA19060.hp2 NA19063.hp2 NA19064.hp2 NA19070.hp2 NA19074.hp1 NA19076.hp2 NA19078.hp1 NA19080.hp1 NA19081.hp1 NA19081.hp2 NA19082.hp2 NA19083.hp2 NA19084.hp2 NA19085.hp2 NA19087.hp1 NA19091.hp1 NA21309.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0012 a0004c0011 a0001c0001 a0001c0012 a0004c0011	a0001c0001t0001 a0001c0001t0008 a0001c0001t0012 others(3): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0012 a0001c0001t0014 a0001c0012t0001 a0004c0011t0001	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(49): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0015 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0024 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0046 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0217 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0228 a0001c0001t0001g0252 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0008g0218 a0001c0001t0012g0184 a0001c0001t0014g0202 a0001c0012t0001g0216 a0004c0011t0001g0207	95	404	0.2352	15	c.721 others(32): Show c.721+3405_721+3406insAACAAAAAAAAAACA	LONRF1	ENSG00000154359.13	transcript	ENST00000398246.8	protein_coding	1/11			chr8	TogoVar
LONRF1_chr8_12716906_12760526	12751294	A A	ATGTTTTT others(8): Show ATGTTTTTTTTTTTGT	intron_variant intron_variant	MODIFIER	NA19064.hp1 NA19064.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0135 a0001c0001t0001g0135	1	404	0.0025	15	c.721 others(32): Show c.721+3405_721+3406insACAAAAAAAAAAACA	LONRF1	ENSG00000154359.13	transcript	ENST00000398246.8	protein_coding	1/11			chr8	TogoVar
LONRF1_chr8_12716906_12760526	12751294	A A	ATGTTTTT others(8): Show ATGTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00733.hp1 HG01070.hp1 others(35): Show HG00597.hp1 HG00733.hp1 HG01070.hp1 HG01074.hp2 HG01168.hp1 HG01192.hp1 HG01192.hp2 HG01517.hp2 HG01981.hp2 HG01993.hp2 HG02055.hp2 HG02109.hp1 HG02258.hp1 HG02280.hp2 HG02300.hp2 HG02572.hp1 HG02630.hp2 HG02698.hp2 HG02896.hp2 HG02965.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03490.hp2 HG03492.hp2 HG04228.hp1 NA18522.hp1 NA18941.hp1 NA18944.hp1 NA18954.hp2 NA18979.hp1 NA18986.hp2 NA18993.hp2 NA19010.hp1 NA19060.hp1 NA19070.hp1 NA20300.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0010 a0001c0001t0017 a0001c0007t0006	a0001c0001t0001g0007 a0001c0001t0001g0026 a0001c0001t0001g0027 others(28): Show a0001c0001t0001g0007 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0001g0057 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0185 a0001c0001t0001g0247 a0001c0001t0003g0124 a0001c0001t0005g0117 a0001c0001t0006g0028 a0001c0001t0006g0110 a0001c0001t0006g0112 a0001c0001t0006g0127 a0001c0001t0006g0128 a0001c0001t0010g0113 a0001c0001t0017g0118 a0001c0007t0006g0050	38	404	0.0941	15	c.721 others(32): Show c.721+3391_721+3405dupAAAAAAAAAAAAACA	LONRF1	ENSG00000154359.13	transcript	ENST00000398246.8	protein_coding	1/11			chr8	TogoVar
LONRF1_chr8_12716906_12760526	12751296	G G	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG01256.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0094 a0001c0001t0001g0094	1	404	0.0025	15	c.721 others(32): Show c.721+3389_721+3403dupAAAAAAAAAAAAAAA	LONRF1	ENSG00000154359.13	transcript	ENST00000398246.8	protein_coding	1/11			chr8	TogoVar
LONRF1_chr8_12716906_12760526	12751300	T T	TTTTTTTG others(8): Show TTTTTTTGTTTGTTTG	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG01123.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0227 a0001c0001t0001g0227	1	404	0.0025	15	c.721 others(32): Show c.721+3399_721+3400insCAAACAAACAAAAAA	LONRF1	ENSG00000154359.13	transcript	ENST00000398246.8	protein_coding	1/11			chr8	TogoVar
LONRF1_chr8_12716906_12760526	12751302	T T	TTTTTTTT others(8): Show TTTTTTTTTGTTTTTG	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0148 a0001c0001t0001g0148	1	404	0.0025	15	c.721 others(32): Show c.721+3397_721+3398insCAAAAACAAAAAAAA	LONRF1	ENSG00000154359.13	transcript	ENST00000398246.8	protein_coding	1/11			chr8	TogoVar
LORICRIN_chr1_153254687_153267124	153266761	G G	GTTCTAAT others(8): Show GTTCTAATAGGTATGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp1 HG03130.hp2 HG03195.hp1 HG03130.hp1 HG03130.hp2 HG03195.hp1	a0006 a0006	a0006c0009 a0006c0011 a0006c0009 a0006c0011	a0006c0009t0001 a0006c0011t0001 a0006c0009t0001 a0006c0011t0001	a0006c0009t0001g0005 a0006c0011t0001g0005 a0006c0009t0001g0005 a0006c0011t0001g0005	3	422	0.0071	15	c.48 others(26): Show c.4873_*4874insTTCTAATAGGTATGA	LORICRIN	ENSG00000203782.6	transcript	ENST00000368742.4	protein_coding		4638		chr1	TogoVar
LOXHD1_chr18_46472273_46662220	46494847	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0071 a0001c0001t0001g0071	1	270	0.0037	15	c.587 others(34): Show c.5879-5706_5879-5705insAAAAAAAAAAAAAAA	LOXHD1	ENSG00000167210.17	transcript	ENST00000642948.1	protein_coding	37/40			chr18	TogoVar
LOXHD1_chr18_46472273_46662220	46545627	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0195 a0003c0003t0001g0195	1	270	0.0037	15	c.351 others(32): Show c.3515-221_3515-207dupAAAAAAAAAAAAAAA	LOXHD1	ENSG00000167210.17	transcript	ENST00000642948.1	protein_coding	22/40			chr18	TogoVar
LOXL2_chr8_23291897_23409120	23307953	G G	GGAAAAAA others(8): Show GGAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02004.hp1 HG02451.hp1 HG02886.hp2 HG02004.hp1 HG02451.hp1 HG02886.hp2	a0002 a0002	a0002c0004 a0002c0014 a0002c0039 a0002c0004 a0002c0014 a0002c0039	a0002c0004t0001 a0002c0014t0005 a0002c0039t0021 a0002c0004t0001 a0002c0014t0005 a0002c0039t0021	a0002c0004t0001g0318 a0002c0014t0005g0208 a0002c0039t0021g0347 a0002c0004t0001g0318 a0002c0014t0005g0208 a0002c0039t0021g0347	3	348	0.0086	15	c.188 others(34): Show c.1880+1714_1880+1715insTTTTTTTTTTTTTTC	LOXL2	ENSG00000134013.16	transcript	ENST00000389131.8	protein_coding	10/13			chr8	TogoVar
LOXL2_chr8_23291897_23409120	23354950	T T	TATATATA others(8): Show TATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02897.hp2 HG02895.hp1 HG02897.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0002 a0001c0005t0002	a0001c0005t0002g0001 a0001c0005t0002g0001	2	348	0.0058	15	c.531 others(32): Show c.531+5139_531+5140insTATATATATATATAT	LOXL2	ENSG00000134013.16	transcript	ENST00000389131.8	protein_coding	3/13			chr8	TogoVar
LOXL2_chr8_23291897_23409120	23361839	A A	AAAAACAA others(8): Show AAAAACAAAACAAAAC	intron_variant intron_variant	MODIFIER	HG02148.hp1 HG02148.hp1	a0002 a0002	a0002c0009 a0002c0009	a0002c0009t0002 a0002c0009t0002	a0002c0009t0002g0098 a0002c0009t0002g0098	1	348	0.0029	15	c.356 others(32): Show c.356-1589_356-1575dupGTTTTGTTTTGTTTT	LOXL2	ENSG00000134013.16	transcript	ENST00000389131.8	protein_coding	2/13			chr8	TogoVar
LPAR3_chr1_84806602_84898206	84806704	A A	ATATTATT others(8): Show ATATTATTATTATTAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp1 HG01891.hp1 HG02055.hp1 others(2): Show HG01884.hp1 HG01891.hp1 HG02055.hp1 HG03471.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0035 a0001c0001t0052 others(2): Show a0001c0001t0002 a0001c0001t0035 a0001c0001t0052 a0001c0001t0079 a0001c0001t0120	a0001c0001t0002g0162 a0001c0001t0035g0163 a0001c0001t0052g0155 others(2): Show a0001c0001t0002g0162 a0001c0001t0035g0163 a0001c0001t0052g0155 a0001c0001t0079g0020 a0001c0001t0120g0158	5	382	0.0131	15	c.71 others(26): Show c.7141_*7142insATAATAATAATAATA	LPAR3	ENSG00000171517.6	transcript	ENST00000370611.4	protein_coding		4897		chr1	TogoVar
LPAR5_chr12_6613835_6640959	6630433	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG01074.hp1 HG01361.hp1 others(4): Show HG00323.hp1 HG01074.hp1 HG01361.hp1 HG02809.hp1 HG03017.hp2 HG03491.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0027 a0001c0001t0001g0069 a0001c0001t0001g0076 others(3): Show a0001c0001t0001g0027 a0001c0001t0001g0069 a0001c0001t0001g0076 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0089	7	406	0.0172	15	c.-21 others(34): Show c.-217+5459_-217+5473dupAAAAAAAAAAAAAAA	LPAR5	ENSG00000184574.10	transcript	ENST00000329858.9	protein_coding	1/1			chr12	TogoVar
LPA_chr6_160526482_160669275	160555238	A A	AATTATAT others(8): Show AATTATATTATATTAT	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02109.hp1 HG02717.hp2 HG00738.hp2 HG02109.hp1 HG02717.hp2	a0001 a0003 a0016 a0001 a0003 a0016	a0001c0001 a0003c0003 a0016c0038 a0001c0001 a0003c0003 a0016c0038	a0001c0001t0001 a0003c0003t0001 a0016c0038t0001 a0001c0001t0001 a0003c0003t0001 a0016c0038t0001	a0001c0001t0001g0066 a0003c0003t0001g0086 a0016c0038t0001g0047 a0001c0001t0001g0066 a0003c0003t0001g0086 a0016c0038t0001g0047	3	148	0.0203	15	c.497 others(32): Show c.4973+772_4973+786dupATAATATAATATAAT	LPA	ENSG00000198670.13	transcript	ENST00000316300.10	protein_coding	30/38			chr6	TogoVar
LPA_chr6_160526482_160669275	160584225	T T	TTCCTCCT others(8): Show TTCCTCCTCCTCCTCC	intron_variant intron_variant	MODIFIER	NA18952.hp2 NA18952.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0134 a0002c0002t0003g0134	1	148	0.0068	15	c.428 others(32): Show c.4289+820_4289+821insGGAGGAGGAGGAGGA	LPA	ENSG00000198670.13	transcript	ENST00000316300.10	protein_coding	26/38			chr6	TogoVar
LPA_chr6_160526482_160669275	160584237	T T	TTCTTCTT others(8): Show TTCTTCTTCTTCCTCC	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02040.hp2 HG03669.hp1 others(3): Show HG02027.hp1 HG02040.hp2 HG03669.hp1 HG03710.hp1 NA18970.hp2 NA19065.hp1	a0002 a0005 a0008 others(1): Show a0002 a0005 a0008 a0031	a0002c0002 a0002c0028 a0005c0007 others(2): Show a0002c0002 a0002c0028 a0005c0007 a0008c0011 a0031c0017	a0002c0002t0001 a0002c0002t0003 a0002c0028t0003 others(3): Show a0002c0002t0001 a0002c0002t0003 a0002c0028t0003 a0005c0007t0001 a0008c0011t0003 a0031c0017t0001	a0002c0002t0001g0100 a0002c0002t0003g0148 a0002c0028t0003g0137 others(3): Show a0002c0002t0001g0100 a0002c0002t0003g0148 a0002c0028t0003g0137 a0005c0007t0001g0096 a0008c0011t0003g0138 a0031c0017t0001g0116	6	148	0.0405	15	c.428 others(32): Show c.4289+808_4289+809insGGAGGAAGAAGAAGA	LPA	ENSG00000198670.13	transcript	ENST00000316300.10	protein_coding	26/38			chr6	TogoVar
LPCAT1_chr5_1456427_1528960	1504310	G G	GCGCAGCG others(8): Show GCGCAGCGGAGGAGAC	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0273 a0001c0002t0004g0273	1	386	0.0026	15	c.136 others(32): Show c.136-2722_136-2708dupGTCTCCTCCGCTGCG	LPCAT1	ENSG00000153395.10	transcript	ENST00000283415.4	protein_coding	1/13			chr5	TogoVar
LPCAT2_chr16_55504072_55591666	55509991	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG03471.hp2 NA20300.hp1 HG02109.hp2 HG03471.hp2 NA20300.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0031 a0001c0002t0009 a0001c0002t0031	a0001c0002t0009g0074 a0001c0002t0031g0073 a0001c0002t0031g0075 a0001c0002t0009g0074 a0001c0002t0031g0073 a0001c0002t0031g0075	3	314	0.0096	15	c.171 others(30): Show c.171+642_171+656dupTTTTTTTTTTTTTTT	LPCAT2	ENSG00000087253.13	transcript	ENST00000262134.10	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
LPCAT4_chr15_34353633_34372196	34370795	C C	CGAGGAGG others(8): Show CGAGGAGGAAGGTGGG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18973.hp1 NA18973.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0002	1	450	0.0022	15	c.-36 others(26): Show c.-3696_-3695insCCCACCTTCCTCCTC	LPCAT4	ENSG00000176454.15	transcript	ENST00000314891.11	protein_coding		3600		chr15	TogoVar
LPGAT1_chr1_211738457_211835763	211774132	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG03834.hp1 NA18975.hp1 others(1): Show HG01123.hp1 HG03834.hp1 NA18975.hp1 NA18990.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0095 others(1): Show a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0095 a0001c0001t0001g0160	4	332	0.0121	15	c.854 others(32): Show c.854+4771_854+4785dupAAAAAAAAAAAAAAA	LPGAT1	ENSG00000123684.13	transcript	ENST00000366997.9	protein_coding	6/7			chr1	TogoVar
LPGAT1_chr1_211738457_211835763	211828428	C C	CAATTTAA others(8): Show CAATTTAAAGGCAGAA	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0199 a0001c0001t0001g0199	1	332	0.0030	15	c.238 others(30): Show c.238+616_238+630dupTTCTGCCTTTAAATT	LPGAT1	ENSG00000123684.13	transcript	ENST00000366997.9	protein_coding	2/7			chr1	TogoVar
LPIN1_chr2_11741632_11832409	11752432	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02572.hp2 HG02717.hp2 others(2): Show HG02559.hp2 HG02572.hp2 HG02717.hp2 HG03130.hp1 HG03209.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0009 a0001c0001 a0001c0002 a0002c0009	a0001c0001t0002 a0001c0002t0008 a0002c0009t0002 a0001c0001t0002 a0001c0002t0008 a0002c0009t0002	a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 others(2): Show a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0002t0008g0081 a0002c0009t0002g0047	5	278	0.0180	15	c.-10 others(32): Show c.-10+5761_-10+5762insTTTTTTTTTTTTTTT	LPIN1	ENSG00000134324.12	transcript	ENST00000674199.1	protein_coding	1/20			chr2	TogoVar
LPIN1_chr2_11741632_11832409	11752433	A A	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0054 a0001c0001t0001g0054	1	278	0.0036	15	c.-10 others(32): Show c.-10+5764_-10+5778dupTTTTTTTTTTTTTTT	LPIN1	ENSG00000134324.12	transcript	ENST00000674199.1	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr2	TogoVar
LPIN1_chr2_11741632_11832409	11759190	T T	TTTCTTTC others(8): Show TTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0007 a0001c0005t0007	a0001c0005t0007g0154 a0001c0005t0007g0154	1	278	0.0036	15	c.-9- others(30): Show c.-9-6341_-9-6340insCTTTCTTTCTTTCTT	LPIN1	ENSG00000134324.12	transcript	ENST00000674199.1	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr2	TogoVar
LPIN2_chr18_2911999_3018144	2958141	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02004.hp2 NA18961.hp1 NA18999.hp2 HG02004.hp2 NA18961.hp1 NA18999.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0008 a0001c0001t0123 a0001c0001t0002 a0001c0001t0008 a0001c0001t0123	a0001c0001t0002g0070 a0001c0001t0008g0214 a0001c0001t0123g0351 a0001c0001t0002g0070 a0001c0001t0008g0214 a0001c0001t0123g0351	3	380	0.0079	15	c.192 others(32): Show c.192+2493_192+2507dupTTTTTTTTTTTTTTT	LPIN2	ENSG00000101577.11	transcript	ENST00000677752.1	protein_coding	2/19			chr18	TogoVar
LPIN2_chr18_2911999_3018144	2958166	A A	AAAAAAAA others(8): Show AAAAAAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	NA19010.hp2 NA19010.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0274 a0001c0001t0001g0274	1	380	0.0026	15	c.192 others(32): Show c.192+2482_192+2483insGTTTTTTTTTTTTTT	LPIN2	ENSG00000101577.11	transcript	ENST00000677752.1	protein_coding	2/19			chr18	TogoVar
LPIN3_chr20_41335821_41365582	41337926	T T	TAAAAAAA others(8): Show TAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19091.hp2 NA19091.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0002 a0002c0002t0002g0002	1	404	0.0025	15	c.-30 others(26): Show c.-3085_-3084insAAAAAAAAAAAAAAA	LPIN3	ENSG00000132793.12	transcript	ENST00000373257.8	protein_coding		2894		chr20	TogoVar
LPP_chr3_188149157_188895671	188167501	C C	CACAAAAC others(8): Show CACAAAACAAAACAAA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01361.hp2 HG02074.hp2 others(17): Show HG00639.hp1 HG01361.hp2 HG02074.hp2 HG02486.hp2 HG02602.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02738.hp1 HG02886.hp1 HG02896.hp1 HG02970.hp2 HG03017.hp1 HG03017.hp2 HG03130.hp2 HG03453.hp2 HG03704.hp2 HG03834.hp1 NA19030.hp1 NA19043.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0007	a0001c0001 a0001c0002 a0001c0005 others(6): Show a0001c0001 a0001c0002 a0001c0005 a0002c0003 a0002c0004 a0002c0007 a0003c0009 a0003c0011 a0007c0013	a0001c0001t0008 a0001c0001t0020 a0001c0001t0025 others(16): Show a0001c0001t0008 a0001c0001t0020 a0001c0001t0025 a0001c0001t0026 a0001c0002t0001 a0001c0002t0010 a0001c0002t0016 a0001c0002t0024 a0001c0002t0054 a0001c0005t0040 a0002c0003t0004 a0002c0003t0022 a0002c0003t0023 a0002c0004t0033 a0002c0004t0039 a0002c0007t0021 a0003c0009t0015 a0003c0011t0048 a0007c0013t0003	a0001c0001t0008g0065 a0001c0001t0020g0067 a0001c0001t0025g0068 others(17): Show a0001c0001t0008g0065 a0001c0001t0020g0067 a0001c0001t0025g0068 a0001c0001t0026g0069 a0001c0002t0001g0029 a0001c0002t0001g0055 a0001c0002t0010g0025 a0001c0002t0016g0028 a0001c0002t0024g0036 a0001c0002t0054g0018 a0001c0005t0040g0030 a0002c0003t0004g0044 a0002c0003t0022g0054 a0002c0003t0023g0001 a0002c0004t0033g0062 a0002c0004t0039g0053 a0002c0007t0021g0063 a0003c0009t0015g0066 a0003c0011t0048g0074 a0007c0013t0003g0046	20	76	0.2632	15	c.-19 others(36): Show c.-190+13275_-190+13289dupACAAAACAAAACAAA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188250920	C C	CTCCCTTC others(8): Show CTCCCTTCCCTTCCCT	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01358.hp1 HG02886.hp1 HG01167.hp1 HG01358.hp1 HG02886.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0002 a0002c0004 a0004c0010 a0001c0002 a0002c0004 a0004c0010	a0001c0002t0050 a0002c0004t0033 a0004c0010t0035 a0001c0002t0050 a0002c0004t0033 a0004c0010t0035	a0001c0002t0050g0052 a0002c0004t0033g0062 a0004c0010t0035g0060 a0001c0002t0050g0052 a0002c0004t0033g0062 a0004c0010t0035g0060	3	76	0.0395	15	c.-67 others(34): Show c.-67+25439_-67+25453dupTCCCTTCCCTTCCCT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188269643	T T	TTTATATG others(8): Show TTTATATGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0045 a0002c0004t0045	a0002c0004t0045g0026 a0002c0004t0045g0026	1	76	0.0132	15	c.-67 others(34): Show c.-67+44117_-67+44118insTATATGTGTGTGTGT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188311471	T T	TCTAAACT others(8): Show TCTAAACTAAACTAAA	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0002 a0002	a0002c0008 a0002c0008	a0002c0008t0027 a0002c0008t0027	a0002c0008t0027g0042 a0002c0008t0027g0042	1	76	0.0132	15	c.-66 others(34): Show c.-66-30146_-66-30132dupCTAAACTAAACTAAA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188371642	T T	TATATATA others(8): Show TATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01256.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0068 a0002c0004t0068	a0002c0004t0068g0020 a0002c0004t0068g0020	1	76	0.0132	15	c.-10 others(34): Show c.-10+29923_-10+29924insATATATATATATATA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	3/11			chr3	TogoVar
LPP_chr3_188149157_188895671	188441609	C C	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01256.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0068 a0002c0004t0068	a0002c0004t0068g0020 a0002c0004t0068g0020	1	76	0.0132	15	c.193 others(34): Show c.193+35311_193+35325dupTTTTTTTTTTTTTTT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188523901	A A	AGTCCTTG others(8): Show AGTCCTTGTTTTTAAC	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00639.hp1 HG00639.hp2 others(55): Show HG00438.hp1 HG00639.hp1 HG00639.hp2 HG00673.hp2 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01167.hp1 HG01167.hp2 HG01175.hp1 HG01256.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01978.hp1 HG01978.hp2 HG02074.hp1 HG02074.hp2 HG02109.hp1 HG02486.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02738.hp1 HG02738.hp2 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03017.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03453.hp1 HG03540.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03834.hp2 NA18522.hp1 NA18522.hp2 NA19030.hp1 NA19043.hp2 NA20752.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0006	a0001c0001 a0001c0002 a0001c0005 others(11): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006 a0002c0003 a0002c0004 a0002c0007 a0002c0014 a0002c0015 a0003c0009 a0003c0011 a0004c0010 a0005c0012 a0006c0016	a0001c0001t0001 a0001c0001t0005 a0001c0001t0008 others(52): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0008 a0001c0001t0017 a0001c0001t0018 a0001c0001t0020 a0001c0001t0025 a0001c0001t0026 a0001c0001t0049 a0001c0001t0051 a0001c0001t0057 a0001c0001t0061 a0001c0002t0001 a0001c0002t0010 a0001c0002t0011 a0001c0002t0016 a0001c0002t0019 a0001c0002t0024 a0001c0002t0050 a0001c0002t0058 a0001c0005t0030 a0001c0005t0031 a0001c0005t0040 a0001c0006t0032 a0001c0006t0034 a0001c0006t0041 a0001c0006t0066 a0002c0003t0002 a0002c0003t0006 a0002c0003t0009 a0002c0003t0013 a0002c0003t0022 a0002c0003t0023 a0002c0003t0028 a0002c0003t0029 a0002c0003t0052 a0002c0003t0053 a0002c0003t0056 a0002c0003t0059 a0002c0004t0003 a0002c0004t0039 a0002c0004t0045 a0002c0004t0067 a0002c0007t0002 a0002c0007t0021 a0002c0014t0065 a0002c0015t0037 a0003c0009t0015 a0003c0009t0062 a0003c0011t0004 a0003c0011t0048 a0004c0010t0035 a0004c0010t0038 a0005c0012t0014 a0006c0016t0043	a0001c0001t0001g0035 a0001c0001t0001g0056 a0001c0001t0005g0024 others(55): Show a0001c0001t0001g0035 a0001c0001t0001g0056 a0001c0001t0005g0024 a0001c0001t0005g0032 a0001c0001t0008g0065 a0001c0001t0017g0064 a0001c0001t0018g0072 a0001c0001t0020g0067 a0001c0001t0025g0068 a0001c0001t0026g0069 a0001c0001t0049g0031 a0001c0001t0051g0019 a0001c0001t0057g0006 a0001c0001t0061g0023 a0001c0002t0001g0055 a0001c0002t0001g0076 a0001c0002t0010g0025 a0001c0002t0011g0038 a0001c0002t0016g0028 a0001c0002t0019g0041 a0001c0002t0024g0036 a0001c0002t0050g0052 a0001c0002t0058g0013 a0001c0005t0030g0047 a0001c0005t0031g0003 a0001c0005t0040g0030 a0001c0006t0032g0005 a0001c0006t0034g0039 a0001c0006t0041g0002 a0001c0006t0066g0021 a0002c0003t0002g0004 a0002c0003t0006g0034 a0002c0003t0009g0070 a0002c0003t0013g0027 a0002c0003t0022g0054 a0002c0003t0023g0001 a0002c0003t0028g0061 a0002c0003t0029g0059 a0002c0003t0052g0014 a0002c0003t0053g0010 a0002c0003t0056g0016 a0002c0003t0059g0011 a0002c0004t0003g0050 a0002c0004t0039g0053 a0002c0004t0045g0026 a0002c0004t0067g0008 a0002c0007t0002g0073 a0002c0007t0021g0063 a0002c0014t0065g0009 a0002c0015t0037g0051 a0003c0009t0015g0066 a0003c0009t0062g0017 a0003c0011t0004g0071 a0003c0011t0048g0074 a0004c0010t0035g0060 a0004c0010t0038g0057 a0005c0012t0014g0045 a0006c0016t0043g0058	58	76	0.7632	15	c.307 others(30): Show c.307-764_307-763insGTCCTTGTTTTTAAC	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	5/11			chr3	TogoVar
LPP_chr3_188149157_188895671	188599751	G G	GTGTGTGT others(8): Show GTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0056 a0002c0003t0056	a0002c0003t0056g0016 a0002c0003t0056g0016	1	76	0.0132	15	c.430 others(32): Show c.430-9410_430-9409insTGTGTGTGTGTGTGT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	6/11			chr3	TogoVar
LPP_chr3_188149157_188895671	188658122	A A	ATTAGTTT others(8): Show ATTAGTTTAGTTTAGT	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01358.hp1 HG02922.hp1 others(4): Show HG01175.hp1 HG01358.hp1 HG02922.hp1 HG02922.hp2 HG03017.hp1 HG03239.hp2 HG03704.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0006 others(2): Show a0001c0001 a0001c0002 a0001c0006 a0002c0014 a0003c0009	a0001c0001t0001 a0001c0001t0017 a0001c0001t0025 others(4): Show a0001c0001t0001 a0001c0001t0017 a0001c0001t0025 a0001c0002t0050 a0001c0006t0064 a0002c0014t0065 a0003c0009t0062	a0001c0001t0001g0056 a0001c0001t0017g0064 a0001c0001t0025g0068 others(4): Show a0001c0001t0001g0056 a0001c0001t0017g0064 a0001c0001t0025g0068 a0001c0002t0050g0052 a0001c0006t0064g0007 a0002c0014t0065g0009 a0003c0009t0062g0017	7	76	0.0921	15	c.111 others(36): Show c.1113+48292_1113+48293insTTTAGTTTAGTTTAG	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188731516	T T	TTTTTGTT others(8): Show TTTTTGTTTTGTTTTG	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp2 HG00673.hp1 others(34): Show HG00438.hp1 HG00438.hp2 HG00673.hp1 HG01074.hp1 HG01081.hp2 HG01167.hp1 HG01175.hp1 HG01175.hp2 HG01256.hp1 HG01358.hp1 HG01361.hp1 HG01978.hp1 HG02074.hp1 HG02074.hp2 HG02486.hp1 HG02602.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02738.hp1 HG02886.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03453.hp2 HG03540.hp1 HG03704.hp2 HG03834.hp2 NA19030.hp1 NA19043.hp1 NA19043.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0006 a0007	a0001c0001 a0001c0002 a0001c0005 others(11): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006 a0002c0003 a0002c0004 a0002c0008 a0002c0014 a0003c0009 a0003c0011 a0004c0010 a0004c0017 a0006c0016 a0007c0013	a0001c0001t0001 a0001c0001t0005 a0001c0001t0008 others(34): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0008 a0001c0001t0020 a0001c0001t0026 a0001c0001t0049 a0001c0001t0055 a0001c0002t0010 a0001c0002t0011 a0001c0002t0019 a0001c0002t0024 a0001c0002t0050 a0001c0002t0058 a0001c0005t0030 a0001c0005t0036 a0001c0005t0040 a0001c0005t0063 a0001c0006t0034 a0002c0003t0002 a0002c0003t0006 a0002c0003t0013 a0002c0003t0023 a0002c0003t0028 a0002c0004t0003 a0002c0004t0012 a0002c0004t0033 a0002c0004t0045 a0002c0004t0068 a0002c0008t0027 a0002c0014t0065 a0003c0009t0015 a0003c0009t0062 a0003c0011t0048 a0004c0010t0035 a0004c0017t0044 a0006c0016t0043 a0007c0013t0003	a0001c0001t0001g0056 a0001c0001t0005g0032 a0001c0001t0008g0065 others(34): Show a0001c0001t0001g0056 a0001c0001t0005g0032 a0001c0001t0008g0065 a0001c0001t0020g0067 a0001c0001t0026g0069 a0001c0001t0049g0031 a0001c0001t0055g0012 a0001c0002t0010g0025 a0001c0002t0011g0038 a0001c0002t0019g0041 a0001c0002t0024g0036 a0001c0002t0050g0052 a0001c0002t0058g0013 a0001c0005t0030g0047 a0001c0005t0036g0075 a0001c0005t0040g0030 a0001c0005t0063g0022 a0001c0006t0034g0039 a0002c0003t0002g0004 a0002c0003t0006g0034 a0002c0003t0013g0027 a0002c0003t0023g0001 a0002c0003t0028g0061 a0002c0004t0003g0050 a0002c0004t0012g0040 a0002c0004t0033g0062 a0002c0004t0045g0026 a0002c0004t0068g0020 a0002c0008t0027g0042 a0002c0014t0065g0009 a0003c0009t0015g0066 a0003c0009t0062g0017 a0003c0011t0048g0074 a0004c0010t0035g0060 a0004c0017t0044g0043 a0006c0016t0043g0058 a0007c0013t0003g0046	37	76	0.4868	15	c.124 others(36): Show c.1240+23134_1240+23148dupTTTTGTTTTGTTTTG	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188843786	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG03098.hp1 HG03195.hp1 others(1): Show HG01081.hp1 HG03098.hp1 HG03195.hp1 NA18522.hp2	a0001 a0002 a0001 a0002	a0001c0006 a0002c0003 a0002c0015 a0001c0006 a0002c0003 a0002c0015	a0001c0006t0032 a0002c0003t0009 a0002c0003t0052 others(1): Show a0001c0006t0032 a0002c0003t0009 a0002c0003t0052 a0002c0015t0037	a0001c0006t0032g0005 a0002c0003t0009g0070 a0002c0003t0052g0014 others(1): Show a0001c0006t0032g0005 a0002c0003t0009g0070 a0002c0003t0052g0014 a0002c0015t0037g0051	4	76	0.0526	15	c.141 others(36): Show c.1411-22402_1411-22401insAAAAAAAAAAAAAAA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRAT_chr4_154739000_154758120	154751392	G G	GTTTGTTG others(8): Show GTTTGTTGTGCTGAGT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00280.hp1 HG00639.hp2 HG00735.hp1 others(47): Show HG00280.hp1 HG00639.hp2 HG00735.hp1 HG00741.hp2 HG01099.hp2 HG01123.hp1 HG01255.hp2 HG01346.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01891.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG02004.hp1 HG02004.hp2 HG02071.hp2 HG02074.hp2 HG02132.hp1 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02300.hp1 HG02486.hp2 HG02602.hp2 HG02698.hp1 HG02738.hp2 HG02895.hp1 HG02897.hp2 HG02922.hp1 HG02970.hp1 HG03225.hp1 HG03486.hp1 HG03516.hp2 HG03654.hp1 HG03710.hp1 HG03927.hp1 HG04228.hp1 NA18942.hp1 NA18969.hp1 NA19004.hp2 NA19070.hp1 NA19074.hp2 NA19084.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0008 a0001c0001t0013 others(7): Show a0001c0001t0004 a0001c0001t0008 a0001c0001t0013 a0001c0001t0022 a0001c0001t0037 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044	a0001c0001t0004g0003 a0001c0001t0004g0010 a0001c0001t0004g0032 others(11): Show a0001c0001t0004g0003 a0001c0001t0004g0010 a0001c0001t0004g0032 a0001c0001t0008g0003 a0001c0001t0008g0010 a0001c0001t0008g0026 a0001c0001t0013g0003 a0001c0001t0022g0012 a0001c0001t0037g0035 a0001c0001t0040g0003 a0001c0001t0041g0003 a0001c0001t0042g0003 a0001c0001t0043g0003 a0001c0001t0044g0003	50	398	0.1256	15	c.22 others(26): Show c.2258_*2259insTGTTGTGCTGAGTTT	LRAT	ENSG00000121207.12	transcript	ENST00000336356.4	protein_coding	3/3	2259	INFO_REALIGN_3_PRIME	chr4	TogoVar
LRBA_chr4_150259435_151020284	150443853	A A	AAAAATAT others(8): Show AAAAATATATATATAT	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG00621.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0003 a0003c0004t0003	a0003c0004t0003g0158 a0003c0004t0003g0158	1	180	0.0056	15	c.678 others(34): Show c.6781-6990_6781-6989insATATATATATATTTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	44/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150443853	A A	AAATATAT others(8): Show AAATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02886.hp2 NA18966.hp1 HG02886.hp2 NA18966.hp1	a0015 a0018 a0015 a0018	a0015c0028 a0018c0034 a0015c0028 a0018c0034	a0015c0028t0003 a0018c0034t0003 a0015c0028t0003 a0018c0034t0003	a0015c0028t0003g0118 a0018c0034t0003g0164 a0015c0028t0003g0118 a0018c0034t0003g0164	2	180	0.0111	15	c.678 others(34): Show c.6781-6990_6781-6989insATATATATATATATT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	44/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150592144	G G	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG02155.hp2 HG02165.hp1 others(6): Show HG02027.hp2 HG02155.hp2 HG02165.hp1 HG02723.hp2 NA18612.hp2 NA18950.hp1 NA18978.hp2 NA18984.hp2 NA19060.hp2	a0001 a0020 a0001 a0020	a0001c0001 a0020c0024 a0001c0001 a0020c0024	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0020c0024t0002	a0001c0001t0001g0015 a0001c0001t0002g0028 a0001c0001t0002g0032 others(6): Show a0001c0001t0001g0015 a0001c0001t0002g0028 a0001c0001t0002g0032 a0001c0001t0002g0034 a0001c0001t0002g0041 a0001c0001t0002g0064 a0001c0001t0004g0025 a0001c0001t0004g0065 a0020c0024t0002g0042	9	180	0.0500	15	c.604 others(34): Show c.6047-1300_6047-1286dupAAAAAAAAAAAAAAA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	38/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150648158	C C	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG01515.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0012 a0001c0001t0002g0012	1	180	0.0056	15	c.592 others(36): Show c.5921+35378_5921+35392dupTTTTTTTTTTTTTTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150658505	G G	GTCTCCTC others(8): Show GTCTCCTCCCTCTCCC	intron_variant intron_variant	MODIFIER	HG01891.hp1 NA18941.hp1 NA18941.hp2 others(2): Show HG01891.hp1 NA18941.hp1 NA18941.hp2 NA18986.hp1 NA19011.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0003c0012 a0001c0001 a0003c0004 a0003c0012	a0001c0001t0001 a0001c0001t0005 a0003c0004t0003 others(1): Show a0001c0001t0001 a0001c0001t0005 a0003c0004t0003 a0003c0012t0003	a0001c0001t0001g0014 a0001c0001t0001g0092 a0001c0001t0005g0023 others(2): Show a0001c0001t0001g0014 a0001c0001t0001g0092 a0001c0001t0005g0023 a0003c0004t0003g0161 a0003c0012t0003g0078	5	180	0.0278	15	c.592 others(36): Show c.5921+25045_5921+25046insGGGAGAGGGAGGAGA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150685420	A A	ATATATAT others(8): Show ATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0001 a0001	a0001c0017 a0001c0017	a0001c0017t0010 a0001c0017t0010	a0001c0017t0010g0136 a0001c0017t0010g0136	1	180	0.0056	15	c.575 others(34): Show c.5755-1704_5755-1703insATATATATATATATA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	36/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150685421	T T	TATATATA others(8): Show TATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01517.hp2 HG02027.hp1 HG02129.hp2 others(3): Show HG01517.hp2 HG02027.hp1 HG02129.hp2 HG02723.hp2 HG03491.hp2 NA18957.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0015 a0001c0001t0001g0071 a0001c0001t0001g0081 others(3): Show a0001c0001t0001g0015 a0001c0001t0001g0071 a0001c0001t0001g0081 a0001c0001t0001g0084 a0001c0001t0001g0112 a0001c0001t0001g0117	6	180	0.0333	15	c.575 others(34): Show c.5755-1705_5755-1704insTATATATATATATAT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	36/56			chr4	TogoVar

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