Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CHRM1_chr11_62903679_62926363	62924629	G G	GCTCTCTC others(9): Show GCTCTCTCTCTCTCTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01952.hp2 HG02027.hp1 NA19002.hp1 HG01952.hp2 HG02027.hp1 NA19002.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0001 a0001c0001t0001g0034 a0001c0002t0001g0023 a0001c0001t0001g0001 a0001c0001t0001g0034 a0001c0002t0001g0023	3	420	0.0071	16	c.-34 others(27): Show c.-3491_-3490insAGAGAGAGAGAGAGAG	CHRM1	ENSG00000168539.4	transcript	ENST00000306960.4	protein_coding		3267		chr11	TogoVar
CHRM1_chr11_62903679_62926363	62924668	C C	CTCTCTCT others(9): Show CTCTCTCTATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19009.hp1 NA19009.hp1	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0001 a0002c0007t0001	a0002c0007t0001g0130 a0002c0007t0001g0130	1	420	0.0024	16	c.-35 others(27): Show c.-3530_-3529insTATATATATAGAGAGA	CHRM1	ENSG00000168539.4	transcript	ENST00000306960.4	protein_coding		3306		chr11	TogoVar
CHRM1_chr11_62903679_62926363	62924668	C C	CTCTCTCT others(9): Show CTCTCTCTCTATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19072.hp2 NA19072.hp2	a0002 a0002	a0002c0009 a0002c0009	a0002c0009t0001 a0002c0009t0001	a0002c0009t0001g0064 a0002c0009t0001g0064	1	420	0.0024	16	c.-35 others(27): Show c.-3530_-3529insTATATATAGAGAGAGA	CHRM1	ENSG00000168539.4	transcript	ENST00000306960.4	protein_coding		3306		chr11	TogoVar
CHRM1_chr11_62903679_62926363	62924668	C C	CTCTCTCT others(9): Show CTCTCTCTCTCTCTATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01928.hp2 NA18959.hp1 NA18960.hp1 others(2): Show HG01928.hp2 NA18959.hp1 NA18960.hp1 NA18979.hp2 NA19004.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0013 a0001c0001t0001g0061 a0001c0001t0001g0006 a0001c0001t0001g0013 a0001c0001t0001g0061	5	420	0.0119	16	c.-35 others(27): Show c.-3530_-3529insTATAGAGAGAGAGAGA	CHRM1	ENSG00000168539.4	transcript	ENST00000306960.4	protein_coding		3306		chr11	TogoVar
CHRM2_chr7_136863652_137025213	136930898	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG01071.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0066 a0001c0001t0010g0066	1	320	0.0031	16	c.-12 others(37): Show c.-124-61275_-124-61260dupAAAAAAAAAAAAAAAA	CHRM2	ENSG00000181072.12	transcript	ENST00000680005.1	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHRM2_chr7_136863652_137025213	136933031	A A	AAAATAAA others(9): Show AAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0256 a0001c0001t0004g0256	1	320	0.0031	16	c.-12 others(37): Show c.-124-59154_-124-59139dupAATAAATAAATAAATA	CHRM2	ENSG00000181072.12	transcript	ENST00000680005.1	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHRM2_chr7_136863652_137025213	137000547	A A	AGAAGGAA others(9): Show AGAAGGAAGGAAGGAAG	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00558.hp1 HG00673.hp2 others(52): Show HG00323.hp2 HG00558.hp1 HG00673.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01123.hp2 HG01261.hp1 HG01261.hp2 HG01358.hp2 HG01433.hp1 HG01496.hp1 HG02056.hp2 HG02109.hp1 HG02280.hp2 HG02451.hp2 HG02559.hp2 HG02630.hp1 HG02630.hp2 HG02683.hp1 HG02723.hp1 HG02970.hp2 HG03130.hp1 HG03490.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03669.hp1 HG03669.hp2 HG03704.hp1 HG04199.hp2 HG04204.hp2 NA18939.hp1 NA18952.hp2 NA18956.hp1 NA18966.hp2 NA18970.hp1 NA18982.hp2 NA18984.hp2 NA18985.hp1 NA19000.hp1 NA19002.hp1 NA19054.hp2 NA19066.hp1 NA19072.hp2 NA19081.hp2 NA19083.hp2 NA19087.hp1 NA19087.hp2 NA19240.hp2 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(22): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0009 a0001c0001t0010 a0001c0001t0015 a0001c0001t0016 a0001c0001t0018 a0001c0001t0020 a0001c0001t0022 a0001c0001t0029 a0001c0001t0034 a0001c0001t0035 a0001c0001t0037 a0001c0001t0043 a0001c0001t0048 a0001c0001t0057 a0001c0001t0064 a0001c0001t0066 a0001c0001t0070 a0001c0001t0079 a0002c0004t0002	a0001c0001t0001g0013 a0001c0001t0001g0023 a0001c0001t0001g0190 others(52): Show a0001c0001t0001g0013 a0001c0001t0001g0023 a0001c0001t0001g0190 a0001c0001t0001g0207 a0001c0001t0001g0254 a0001c0001t0001g0290 a0001c0001t0002g0015 a0001c0001t0002g0029 a0001c0001t0002g0031 a0001c0001t0002g0126 a0001c0001t0002g0137 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0152 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0293 a0001c0001t0003g0220 a0001c0001t0003g0248 a0001c0001t0003g0249 a0001c0001t0004g0090 a0001c0001t0004g0202 a0001c0001t0005g0162 a0001c0001t0005g0291 a0001c0001t0005g0294 a0001c0001t0006g0226 a0001c0001t0006g0227 a0001c0001t0006g0276 a0001c0001t0009g0215 a0001c0001t0009g0313 a0001c0001t0010g0065 a0001c0001t0010g0066 a0001c0001t0010g0250 a0001c0001t0015g0046 a0001c0001t0015g0048 a0001c0001t0016g0118 a0001c0001t0018g0311 a0001c0001t0020g0102 a0001c0001t0022g0124 a0001c0001t0022g0125 a0001c0001t0029g0292 a0001c0001t0034g0143 a0001c0001t0035g0114 a0001c0001t0037g0054 a0001c0001t0043g0246 a0001c0001t0048g0049 a0001c0001t0057g0214 a0001c0001t0064g0003 a0001c0001t0066g0044 a0001c0001t0070g0186 a0001c0001t0079g0101 a0002c0004t0002g0165	55	320	0.1719	16	c.-47 others(33): Show c.-47+8313_-47+8328dupAAGGAAGGAAGGAAGG	CHRM2	ENSG00000181072.12	transcript	ENST00000680005.1	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHRM2_chr7_136863652_137025213	137000567	G G	GGAAGGAA others(9): Show GGAAGGAAGGAAGGAAA	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG03579.hp2 NA20129.hp2 HG01891.hp1 HG03579.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0033 a0001c0001t0024 a0001c0001t0033	a0001c0001t0024g0067 a0001c0001t0024g0221 a0001c0001t0033g0103 a0001c0001t0024g0067 a0001c0001t0024g0221 a0001c0001t0033g0103	3	320	0.0094	16	c.-47 others(33): Show c.-47+8318_-47+8319insAGAAGGAAGGAAGGAA	CHRM2	ENSG00000181072.12	transcript	ENST00000680005.1	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHRM3_chr1_239381568_239920450	239383054	G G	GTCTCTCT others(9): Show GTCTCTCTCTTTCTCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01433.hp1 HG03041.hp1 HG03471.hp1 others(1): Show HG01433.hp1 HG03041.hp1 HG03471.hp1 HG03540.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0003 a0001c0001 a0004c0003	a0001c0001t0007 a0001c0001t0033 a0001c0001t0040 others(1): Show a0001c0001t0007 a0001c0001t0033 a0001c0001t0040 a0004c0003t0053	a0001c0001t0007g0060 a0001c0001t0033g0018 a0001c0001t0040g0102 others(1): Show a0001c0001t0007g0060 a0001c0001t0033g0018 a0001c0001t0040g0102 a0004c0003t0053g0099	4	116	0.0345	16	c.-46 others(27): Show c.-4694_-4693insTCTCTCTCTTTCTCTC	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding		3513		chr1	TogoVar
CHRM3_chr1_239381568_239920450	239403976	G G	GGAGAGAG others(9): Show GGAGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01261.hp1 HG03195.hp2 others(2): Show HG00639.hp2 HG01261.hp1 HG03195.hp2 HG03239.hp2 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0039 others(1): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0039 a0001c0001t0044	a0001c0001t0001g0010 a0001c0001t0001g0052 a0001c0001t0008g0072 others(2): Show a0001c0001t0001g0010 a0001c0001t0001g0052 a0001c0001t0008g0072 a0001c0001t0039g0112 a0001c0001t0044g0104	5	116	0.0431	16	c.-52 others(37): Show c.-521+16772_-521+16787dupGAGAGAGAGAGAGAGA	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRM3_chr1_239381568_239920450	239404409	A A	AGAAAGAA others(9): Show AGAAAGAAAGAAAGAAG	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0036 a0001c0001t0020g0036	1	116	0.0086	16	c.-52 others(37): Show c.-521+17182_-521+17183insGAAAGAAAGAAAGAAG	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	1/6			chr1	TogoVar
CHRM3_chr1_239381568_239920450	239404410	A A	AAGAAAGA others(9): Show AAGAAAGAAAGAAAAAG	intron_variant intron_variant	MODIFIER	HG02735.hp1 HG02735.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0049 a0001c0001t0049	a0001c0001t0049g0108 a0001c0001t0049g0108	1	116	0.0086	16	c.-52 others(37): Show c.-521+17184_-521+17185insGAAAGAAAGAAAAAGA	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRM3_chr1_239381568_239920450	239479190	C C	CCACACAC others(9): Show CCACACACACACACACA	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0025 a0001c0001t0019g0025	1	116	0.0086	16	c.-52 others(37): Show c.-520-13494_-520-13479dupCACACACACACACACA	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRM3_chr1_239381568_239920450	239580689	T T	TTATATAT others(9): Show TTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00438.hp1 HG00738.hp1 others(12): Show HG00140.hp1 HG00438.hp1 HG00738.hp1 HG01255.hp2 HG01256.hp1 HG01981.hp1 HG03239.hp1 HG03831.hp2 NA18939.hp1 NA18944.hp2 NA19030.hp1 NA19068.hp1 NA20752.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0025 a0001c0001t0032 a0001c0001t0047 a0001c0001t0051 a0001c0001t0052	a0001c0001t0001g0056 a0001c0001t0002g0048 a0001c0001t0002g0107 others(12): Show a0001c0001t0001g0056 a0001c0001t0002g0048 a0001c0001t0002g0107 a0001c0001t0003g0057 a0001c0001t0003g0115 a0001c0001t0004g0016 a0001c0001t0005g0073 a0001c0001t0007g0068 a0001c0001t0008g0067 a0001c0001t0008g0082 a0001c0001t0025g0097 a0001c0001t0032g0086 a0001c0001t0047g0070 a0001c0001t0051g0034 a0001c0001t0052g0106	15	116	0.1293	16	c.-31 others(37): Show c.-313+34941_-313+34956dupTATATATATATATATA	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRM3_chr1_239381568_239920450	239602090	A A	ATATGTGT others(9): Show ATATGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00609.hp2 HG00639.hp2 others(14): Show HG00140.hp1 HG00609.hp2 HG00639.hp2 HG00738.hp1 HG01255.hp1 HG01256.hp1 HG01258.hp2 HG01346.hp1 HG01496.hp2 HG01515.hp1 HG02735.hp1 HG04115.hp2 NA18943.hp2 NA18944.hp1 NA20752.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0044 a0001c0001t0049 a0001c0001t0051	a0001c0001t0001g0005 a0001c0001t0001g0009 a0001c0001t0001g0010 others(14): Show a0001c0001t0001g0005 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0056 a0001c0001t0001g0083 a0001c0001t0002g0006 a0001c0001t0002g0069 a0001c0001t0002g0107 a0001c0001t0004g0024 a0001c0001t0007g0068 a0001c0001t0008g0067 a0001c0001t0010g0031 a0001c0001t0011g0071 a0001c0001t0011g0087 a0001c0001t0044g0104 a0001c0001t0049g0108 a0001c0001t0051g0034	17	116	0.1466	16	c.-31 others(37): Show c.-312-30133_-312-30132insATGTGTGTGTGTGTGT	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRM3_chr1_239381568_239920450	239602110	G G	GTGTGTGT others(9): Show GTGTGTGTATATATATA	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG01258.hp1 HG01261.hp1 others(5): Show HG01256.hp2 HG01258.hp1 HG01261.hp1 HG01433.hp2 HG02922.hp1 HG03098.hp1 HG06807.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 others(4): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0021 a0001c0001t0042 a0001c0001t0045 a0001c0001t0054	a0001c0001t0002g0037 a0001c0001t0002g0051 a0001c0001t0003g0092 others(5): Show a0001c0001t0002g0037 a0001c0001t0002g0051 a0001c0001t0003g0092 a0001c0001t0008g0072 a0001c0001t0021g0093 a0001c0001t0042g0080 a0001c0001t0045g0014 a0001c0001t0054g0096	8	116	0.0690	16	c.-31 others(37): Show c.-312-30113_-312-30112insGTGTGTATATATATAT	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRM3_chr1_239381568_239920450	239602110	G G	GTGTGTGT others(9): Show GTGTGTGTGTGTATATA	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0066 a0001c0001t0003g0066	1	116	0.0086	16	c.-31 others(37): Show c.-312-30113_-312-30112insGTGTGTGTGTATATAT	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRM3_chr1_239381568_239920450	239634375	A A	ATGAAAGA others(9): Show ATGAAAGAAAGAAAGAC	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00438.hp1 HG00639.hp2 others(12): Show HG00140.hp2 HG00438.hp1 HG00639.hp2 HG01109.hp1 HG01255.hp1 HG01261.hp1 HG01496.hp2 HG01515.hp1 HG02083.hp2 HG03831.hp2 NA18939.hp2 NA18943.hp1 NA18944.hp1 NA18955.hp1 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0008 a0001c0001t0010 a0001c0001t0028 a0001c0001t0031 a0001c0001t0032 a0001c0001t0047	a0001c0001t0001g0010 a0001c0001t0001g0105 a0001c0001t0001g0109 others(12): Show a0001c0001t0001g0010 a0001c0001t0001g0105 a0001c0001t0001g0109 a0001c0001t0002g0006 a0001c0001t0002g0069 a0001c0001t0002g0074 a0001c0001t0004g0024 a0001c0001t0004g0030 a0001c0001t0008g0072 a0001c0001t0010g0031 a0001c0001t0010g0110 a0001c0001t0028g0017 a0001c0001t0031g0116 a0001c0001t0032g0086 a0001c0001t0047g0070	15	116	0.1293	16	c.-25 others(35): Show c.-250+2089_-250+2090insTGAAAGAAAGAAAGAC	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	4/6			chr1	TogoVar
CHRM3_chr1_239381568_239920450	239634376	C C	CGAAAGAA others(9): Show CGAAAGAAAGAAAGAAA	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0039 a0001c0001t0003g0039	1	116	0.0086	16	c.-25 others(35): Show c.-250+2104_-250+2119dupAAAGAAAGAAAGAAAG	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRM3_chr1_239381568_239920450	239679027	G G	GGATAGAT others(9): Show GGATAGATAGATAGATA	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG01258.hp1 HG02258.hp2 others(6): Show HG01256.hp2 HG01258.hp1 HG02258.hp2 HG02451.hp1 HG02735.hp1 HG03098.hp1 HG03209.hp1 HG03540.hp2 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0019 a0001c0001t0033 a0001c0001t0042 a0001c0001t0049 a0001c0005t0048	a0001c0001t0001g0054 a0001c0001t0002g0037 a0001c0001t0002g0051 others(6): Show a0001c0001t0001g0054 a0001c0001t0002g0037 a0001c0001t0002g0051 a0001c0001t0005g0077 a0001c0001t0019g0025 a0001c0001t0033g0018 a0001c0001t0042g0080 a0001c0001t0049g0108 a0001c0005t0048g0081	9	116	0.0776	16	c.-14 others(33): Show c.-147+756_-147+771dupGATAGATAGATAGATA	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRM3_chr1_239381568_239920450	239768498	A A	ACGTAAGA others(9): Show ACGTAAGAATTAATTGC	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00438.hp2 others(76): Show HG00140.hp1 HG00140.hp2 HG00438.hp2 HG00609.hp1 HG00639.hp1 HG00639.hp2 HG00738.hp1 HG00738.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01981.hp2 HG02040.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02258.hp1 HG02258.hp2 HG02451.hp1 HG02451.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp2 HG02818.hp2 HG02922.hp1 HG02970.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp2 HG03540.hp1 HG03540.hp2 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp2 NA18939.hp2 NA18943.hp1 NA18944.hp1 NA19000.hp2 NA19012.hp2 NA19030.hp1 NA19043.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0005 a0002c0002 others(1): Show a0001c0001 a0001c0005 a0002c0002 a0003c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(47): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029 a0001c0001t0030 a0001c0001t0031 a0001c0001t0033 a0001c0001t0034 a0001c0001t0036 a0001c0001t0037 a0001c0001t0039 a0001c0001t0040 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044 a0001c0001t0045 a0001c0001t0047 a0001c0001t0049 a0001c0001t0050 a0001c0001t0051 a0001c0001t0054 a0001c0001t0055 a0001c0001t0056 a0001c0001t0057 a0001c0001t0058 a0001c0001t0059 a0001c0001t0061 a0001c0005t0048 a0002c0002t0002 a0003c0004t0041	a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0013 others(76): Show a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0052 a0001c0001t0001g0058 a0001c0001t0001g0083 a0001c0001t0001g0109 a0001c0001t0002g0006 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0069 a0001c0001t0002g0074 a0001c0001t0002g0107 a0001c0001t0003g0039 a0001c0001t0003g0047 a0001c0001t0003g0092 a0001c0001t0004g0024 a0001c0001t0004g0030 a0001c0001t0004g0064 a0001c0001t0005g0041 a0001c0001t0005g0053 a0001c0001t0005g0073 a0001c0001t0005g0077 a0001c0001t0006g0003 a0001c0001t0006g0065 a0001c0001t0007g0055 a0001c0001t0007g0060 a0001c0001t0008g0067 a0001c0001t0008g0082 a0001c0001t0009g0038 a0001c0001t0009g0111 a0001c0001t0010g0031 a0001c0001t0010g0110 a0001c0001t0011g0071 a0001c0001t0011g0087 a0001c0001t0012g0028 a0001c0001t0012g0049 a0001c0001t0013g0078 a0001c0001t0014g0075 a0001c0001t0014g0095 a0001c0001t0015g0033 a0001c0001t0015g0063 a0001c0001t0016g0114 a0001c0001t0018g0022 a0001c0001t0018g0042 a0001c0001t0019g0025 a0001c0001t0020g0021 a0001c0001t0020g0036 a0001c0001t0021g0019 a0001c0001t0026g0091 a0001c0001t0027g0020 a0001c0001t0028g0017 a0001c0001t0029g0090 a0001c0001t0030g0023 a0001c0001t0031g0116 a0001c0001t0033g0018 a0001c0001t0034g0089 a0001c0001t0036g0094 a0001c0001t0037g0029 a0001c0001t0039g0112 a0001c0001t0040g0102 a0001c0001t0042g0080 a0001c0001t0043g0046 a0001c0001t0044g0104 a0001c0001t0045g0014 a0001c0001t0047g0070 a0001c0001t0049g0108 a0001c0001t0050g0015 a0001c0001t0051g0034 a0001c0001t0054g0096 a0001c0001t0055g0113 a0001c0001t0056g0079 a0001c0001t0057g0084 a0001c0001t0058g0011 a0001c0001t0059g0062 a0001c0001t0061g0027 a0001c0005t0048g0081 a0002c0002t0002g0012 a0003c0004t0041g0043	79	116	0.6810	16	c.-14 others(37): Show c.-146-58754_-146-58753insCGTAAGAATTAATTGC	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	5/6			chr1	TogoVar
CHRM3_chr1_239381568_239920450	239874285	G G	GTATATAT others(9): Show GTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0003 a0001c0001t0006g0003	1	116	0.0086	16	c.-19 others(35): Show c.-19-33121_-19-33106dupTATATATATATATATA	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRM5_chr15_33963497_34072458	34053319	A A	AAAAAATA others(9): Show AAAAAATATATATATAT	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0016 a0002c0003t0016	a0002c0003t0016g0298 a0002c0003t0016g0298	1	338	0.0030	16	c.-76 others(33): Show c.-76+6449_-76+6450insAAAATATATATATATA	CHRM5	ENSG00000184984.10	transcript	ENST00000383263.7	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr15	TogoVar
CHRNA4_chr20_63338223_63366349	63352832	C C	CCAGCCCC others(9): Show CCAGCCCCCAGGTCCCA	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG01258.hp1 HG02015.hp1 others(14): Show HG00544.hp2 HG01258.hp1 HG02015.hp1 HG02129.hp2 HG02630.hp2 HG03017.hp2 HG03239.hp2 HG03669.hp1 HG03688.hp1 HG03704.hp2 HG03834.hp1 HG04115.hp1 HG04204.hp2 NA18612.hp2 NA18747.hp2 NA19043.hp2 NA19064.hp2	a0001 a0014 a0015 a0001 a0014 a0015	a0001c0004 a0014c0023 a0015c0009 a0001c0004 a0014c0023 a0015c0009	a0001c0004t0005 a0001c0004t0007 a0001c0004t0021 others(3): Show a0001c0004t0005 a0001c0004t0007 a0001c0004t0021 a0001c0004t0037 a0014c0023t0007 a0015c0009t0005	a0001c0004t0005g0012 a0001c0004t0005g0013 a0001c0004t0005g0107 others(12): Show a0001c0004t0005g0012 a0001c0004t0005g0013 a0001c0004t0005g0107 a0001c0004t0005g0137 a0001c0004t0005g0138 a0001c0004t0005g0144 a0001c0004t0007g0106 a0001c0004t0007g0135 a0001c0004t0007g0136 a0001c0004t0007g0142 a0001c0004t0007g0143 a0001c0004t0021g0095 a0001c0004t0037g0147 a0014c0023t0007g0145 a0015c0009t0005g0105	17	168	0.1012	16	c.384 others(33): Show c.384-1821_384-1806dupTGGGACCTGGGGGCTG	CHRNA4	ENSG00000101204.18	transcript	ENST00000370263.9	protein_coding	4/5			chr20	TogoVar
CHRNA4_chr20_63338223_63366349	63353500	G G	GGGGGGGC others(9): Show GGGGGGGCTGCGGTCCT	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0062 a0001c0002t0001g0062	1	168	0.0060	16	c.383 others(33): Show c.383+2459_383+2474dupAGGACCGCAGCCCCCC	CHRNA4	ENSG00000101204.18	transcript	ENST00000370263.9	protein_coding	4/5			chr20	TogoVar
CHRNA4_chr20_63338223_63366349	63353703	G G	GGGGGGCT others(9): Show GGGGGGCTGTGGTCCTA	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01943.hp1 HG01993.hp2 others(4): Show HG01106.hp2 HG01943.hp1 HG01993.hp2 HG02004.hp2 HG02080.hp2 NA18747.hp1 NA20129.hp1	a0001 a0006 a0007 a0001 a0006 a0007	a0001c0001 a0006c0026 a0007c0024 a0001c0001 a0006c0026 a0007c0024	a0001c0001t0004 a0006c0026t0004 a0007c0024t0004 a0001c0001t0004 a0006c0026t0004 a0007c0024t0004	a0001c0001t0004g0011 a0001c0001t0004g0088 a0001c0001t0004g0089 others(3): Show a0001c0001t0004g0011 a0001c0001t0004g0088 a0001c0001t0004g0089 a0001c0001t0004g0090 a0006c0026t0004g0103 a0007c0024t0004g0102	7	168	0.0417	16	c.383 others(33): Show c.383+2271_383+2272insTAGGACCACAGCCCCC	CHRNA4	ENSG00000101204.18	transcript	ENST00000370263.9	protein_coding	4/5			chr20	TogoVar
CHRNA4_chr20_63338223_63366349	63356992	C C	CGACCACA others(9): Show CGACCACATCGCCATAG	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG02698.hp2 HG03492.hp1 others(2): Show HG00323.hp2 HG02698.hp2 HG03492.hp1 HG03688.hp2 HG04115.hp2	a0001 a0002 a0009 a0001 a0002 a0009	a0001c0001 a0002c0007 a0009c0025 a0001c0001 a0002c0007 a0009c0025	a0001c0001t0013 a0001c0001t0014 a0002c0007t0015 others(1): Show a0001c0001t0013 a0001c0001t0014 a0002c0007t0015 a0009c0025t0013	a0001c0001t0013g0131 a0001c0001t0014g0129 a0001c0001t0014g0130 others(2): Show a0001c0001t0013g0131 a0001c0001t0014g0129 a0001c0001t0014g0130 a0002c0007t0015g0032 a0009c0025t0013g0146	5	168	0.0298	16	c.229 others(31): Show c.229-578_229-577insCTATGGCGATGTGGTC	CHRNA4	ENSG00000101204.18	transcript	ENST00000370263.9	protein_coding	2/5			chr20	TogoVar
CHRNA4_chr20_63338223_63366349	63357158	T T	TCCACAGG others(9): Show TCCACAGGACCACATTC	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG02698.hp2 HG03492.hp1 others(2): Show HG00323.hp2 HG02698.hp2 HG03492.hp1 HG03688.hp2 HG04115.hp2	a0001 a0002 a0009 a0001 a0002 a0009	a0001c0001 a0002c0007 a0009c0025 a0001c0001 a0002c0007 a0009c0025	a0001c0001t0013 a0001c0001t0014 a0002c0007t0015 others(1): Show a0001c0001t0013 a0001c0001t0014 a0002c0007t0015 a0009c0025t0013	a0001c0001t0013g0131 a0001c0001t0014g0129 a0001c0001t0014g0130 others(2): Show a0001c0001t0013g0131 a0001c0001t0014g0129 a0001c0001t0014g0130 a0002c0007t0015g0032 a0009c0025t0013g0146	5	168	0.0298	16	c.229 others(31): Show c.229-759_229-744dupGAATGTGGTCCTGTGG	CHRNA4	ENSG00000101204.18	transcript	ENST00000370263.9	protein_coding	2/5			chr20	TogoVar
CHRNA5_chr15_78560520_78600269	78570424	A A	ATTTTTTT others(9): Show ATTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18949.hp1 NA18949.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0086 a0001c0001t0001g0086	1	382	0.0026	16	c.106 others(33): Show c.106+4609_106+4624dupTTTTTTTTTTTTTTTT	CHRNA5	ENSG00000169684.13	transcript	ENST00000299565.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr15	TogoVar
CHRNA6_chr8_42747620_42773786	42755269	A A	ATGTTTGT others(9): Show ATGTTTGTTTGTTTGTT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02615.hp2 HG02647.hp1 others(10): Show HG01243.hp1 HG02615.hp2 HG02647.hp1 HG02717.hp2 HG02886.hp2 HG02922.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03209.hp2 HG03486.hp2 HG03516.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0050 a0001c0001t0003g0025 a0001c0001t0003g0040 others(9): Show a0001c0001t0002g0050 a0001c0001t0003g0025 a0001c0001t0003g0040 a0001c0001t0003g0041 a0001c0001t0003g0042 a0001c0001t0003g0043 a0001c0001t0003g0044 a0001c0001t0003g0045 a0001c0001t0003g0046 a0001c0001t0003g0047 a0001c0001t0003g0048 a0001c0001t0003g0119	13	350	0.0371	16	c.135 others(33): Show c.1353+561_1353+576dupAACAAACAAACAAACA	CHRNA6	ENSG00000147434.9	transcript	ENST00000276410.7	protein_coding	5/5			chr8	TogoVar
CHRNA7_chr15_32025515_32178018	32044253	C C	CTCCTTCC others(9): Show CTCCTTCCTTCCTTCCT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00544.hp1 HG00558.hp1 others(76): Show HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00639.hp1 HG00673.hp2 HG00738.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp2 HG01074.hp2 HG01109.hp1 HG01169.hp2 HG01175.hp2 HG01258.hp2 HG01358.hp2 HG01433.hp2 HG01496.hp2 HG01934.hp1 HG01978.hp1 HG01981.hp2 HG02040.hp1 HG02056.hp2 HG02074.hp1 HG02083.hp1 HG02148.hp1 HG02155.hp1 HG02155.hp2 HG02273.hp2 HG02293.hp1 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02630.hp1 HG02698.hp2 HG02735.hp1 HG02886.hp1 HG02922.hp2 HG03017.hp2 HG03225.hp1 HG03471.hp1 HG03579.hp2 HG03831.hp2 HG03942.hp2 HG04184.hp1 NA18747.hp1 NA18942.hp2 NA18943.hp1 NA18946.hp1 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18959.hp1 NA18969.hp2 NA18973.hp1 NA18979.hp1 NA18980.hp2 NA18982.hp1 NA18992.hp1 NA18994.hp2 NA18999.hp2 NA19000.hp1 NA19006.hp2 NA19009.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp2 NA19060.hp1 NA19062.hp2 NA19068.hp2 NA19074.hp1 NA19079.hp1 NA19083.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA20300.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0002 a0001c0003 others(7): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0009 a0001c0012 a0002c0013 a0004c0018	a0001c0001t0001 a0001c0001t0003 a0001c0001t0010 others(22): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0010 a0001c0001t0012 a0001c0001t0014 a0001c0001t0020 a0001c0001t0023 a0001c0001t0029 a0001c0001t0040 a0001c0001t0047 a0001c0002t0002 a0001c0002t0005 a0001c0002t0006 a0001c0002t0028 a0001c0002t0031 a0001c0003t0001 a0001c0003t0021 a0001c0004t0003 a0001c0005t0004 a0001c0005t0032 a0001c0006t0002 a0001c0009t0001 a0001c0012t0001 a0002c0013t0002 a0004c0018t0024	a0001c0001t0001g0141 a0001c0001t0001g0145 a0001c0001t0001g0151 others(76): Show a0001c0001t0001g0141 a0001c0001t0001g0145 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0175 a0001c0001t0001g0212 a0001c0001t0001g0222 a0001c0001t0001g0228 a0001c0001t0001g0233 a0001c0001t0001g0237 a0001c0001t0001g0242 a0001c0001t0001g0263 a0001c0001t0001g0268 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0003g0131 a0001c0001t0003g0232 a0001c0001t0003g0266 a0001c0001t0010g0153 a0001c0001t0012g0241 a0001c0001t0014g0105 a0001c0001t0020g0276 a0001c0001t0023g0229 a0001c0001t0029g0213 a0001c0001t0040g0084 a0001c0001t0047g0106 a0001c0002t0002g0132 a0001c0002t0002g0134 a0001c0002t0002g0135 a0001c0002t0002g0136 a0001c0002t0002g0138 a0001c0002t0002g0140 a0001c0002t0002g0143 a0001c0002t0002g0147 a0001c0002t0002g0148 a0001c0002t0002g0154 a0001c0002t0002g0179 a0001c0002t0002g0181 a0001c0002t0002g0185 a0001c0002t0002g0236 a0001c0002t0002g0238 a0001c0002t0002g0239 a0001c0002t0002g0243 a0001c0002t0002g0262 a0001c0002t0002g0275 a0001c0002t0002g0285 a0001c0002t0002g0299 a0001c0002t0005g0150 a0001c0002t0006g0010 a0001c0002t0006g0142 a0001c0002t0006g0178 a0001c0002t0006g0227 a0001c0002t0006g0269 a0001c0002t0028g0264 a0001c0002t0031g0041 a0001c0003t0001g0107 a0001c0003t0001g0139 a0001c0003t0001g0144 a0001c0003t0001g0155 a0001c0003t0001g0231 a0001c0003t0001g0240 a0001c0003t0001g0244 a0001c0003t0001g0265 a0001c0003t0001g0267 a0001c0003t0001g0288 a0001c0003t0021g0274 a0001c0004t0003g0116 a0001c0004t0003g0133 a0001c0004t0003g0273 a0001c0005t0004g0146 a0001c0005t0032g0176 a0001c0006t0002g0149 a0001c0006t0002g0186 a0001c0009t0001g0234 a0001c0009t0001g0235 a0001c0012t0001g0137 a0002c0013t0002g0214 a0004c0018t0024g0208	79	307	0.2573	16	c.195 others(35): Show c.195+13235_195+13250dupCTTCCTTCCTTCCTTC	CHRNA7	ENSG00000175344.19	transcript	ENST00000306901.9	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
CHRNA7_chr15_32025515_32178018	32070669	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02896.hp1 NA18522.hp2 HG02896.hp1 NA18522.hp2	a0001 a0001	a0001c0002 a0001c0008 a0001c0002 a0001c0008	a0001c0002t0005 a0001c0008t0018 a0001c0002t0005 a0001c0008t0018	a0001c0002t0005g0192 a0001c0008t0018g0196 a0001c0002t0005g0192 a0001c0008t0018g0196	2	307	0.0065	16	c.196 others(35): Show c.196-30614_196-30599dupTTTTTTTTTTTTTTTT	CHRNA7	ENSG00000175344.19	transcript	ENST00000306901.9	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
CHRNA7_chr15_32025515_32178018	32098871	A A	AACACACA others(9): Show AACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00597.hp2 HG00609.hp1 others(30): Show HG00438.hp2 HG00597.hp2 HG00609.hp1 HG01256.hp2 HG01346.hp2 HG01358.hp2 HG01952.hp1 HG02055.hp1 HG02074.hp2 HG02559.hp1 HG02630.hp2 HG02647.hp1 HG02723.hp2 HG02896.hp1 HG02897.hp2 HG02970.hp1 HG02970.hp2 HG03209.hp1 HG03471.hp1 HG03492.hp1 HG04115.hp1 HG04115.hp2 HG06807.hp2 NA18959.hp1 NA18961.hp2 NA18969.hp1 NA19006.hp2 NA19009.hp2 NA19056.hp2 NA19060.hp1 NA19068.hp2 NA19083.hp1 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0008 a0001c0010	a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 others(15): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 a0001c0001t0015 a0001c0001t0016 a0001c0001t0020 a0001c0001t0040 a0001c0002t0002 a0001c0002t0005 a0001c0002t0006 a0001c0003t0001 a0001c0003t0021 a0001c0005t0004 a0001c0005t0007 a0001c0005t0032 a0001c0006t0010 a0001c0008t0018 a0001c0010t0009	a0001c0001t0001g0018 a0001c0001t0001g0051 a0001c0001t0001g0083 others(30): Show a0001c0001t0001g0018 a0001c0001t0001g0051 a0001c0001t0001g0083 a0001c0001t0001g0129 a0001c0001t0001g0141 a0001c0001t0001g0268 a0001c0001t0001g0270 a0001c0001t0003g0019 a0001c0001t0009g0203 a0001c0001t0015g0216 a0001c0001t0016g0156 a0001c0001t0020g0276 a0001c0001t0040g0084 a0001c0002t0002g0181 a0001c0002t0002g0217 a0001c0002t0002g0285 a0001c0002t0005g0171 a0001c0002t0006g0178 a0001c0003t0001g0226 a0001c0003t0001g0279 a0001c0003t0001g0288 a0001c0003t0021g0161 a0001c0005t0004g0050 a0001c0005t0004g0059 a0001c0005t0004g0146 a0001c0005t0007g0066 a0001c0005t0007g0067 a0001c0005t0032g0176 a0001c0006t0010g0112 a0001c0008t0018g0170 a0001c0008t0018g0196 a0001c0008t0018g0199 a0001c0010t0009g0190	33	307	0.1075	16	c.196 others(33): Show c.196-2409_196-2394dupACACACACACACACAC	CHRNA7	ENSG00000175344.19	transcript	ENST00000306901.9	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
CHRNA7_chr15_32025515_32178018	32114023	T T	TATATATA others(9): Show TATATATATATACATAC	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0004 a0001c0005t0004	a0001c0005t0004g0207 a0001c0005t0004g0207	1	307	0.0033	16	c.350 others(33): Show c.350+2135_350+2136insCATACATATATATATA	CHRNA7	ENSG00000175344.19	transcript	ENST00000306901.9	protein_coding	4/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
CHRNA7_chr15_32025515_32178018	32114043	T T	TATATATA others(9): Show TATATATATATACACAC	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01069.hp2 HG01070.hp1 others(18): Show HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01358.hp1 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG02602.hp2 HG02647.hp2 NA18943.hp2 NA18955.hp2 NA18956.hp2 NA19012.hp2 NA19062.hp1 NA19085.hp2 NA20905.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0006	a0001c0001t0001 a0001c0001t0003 a0001c0001t0016 others(10): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0016 a0001c0001t0023 a0001c0001t0036 a0001c0002t0002 a0001c0002t0005 a0001c0002t0006 a0001c0003t0001 a0001c0004t0003 a0001c0004t0022 a0001c0006t0002 a0001c0006t0034	a0001c0001t0001g0242 a0001c0001t0003g0025 a0001c0001t0003g0232 others(18): Show a0001c0001t0001g0242 a0001c0001t0003g0025 a0001c0001t0003g0232 a0001c0001t0016g0086 a0001c0001t0023g0162 a0001c0001t0023g0163 a0001c0001t0036g0250 a0001c0002t0002g0245 a0001c0002t0005g0251 a0001c0002t0006g0010 a0001c0003t0001g0164 a0001c0003t0001g0166 a0001c0003t0001g0230 a0001c0003t0001g0231 a0001c0004t0003g0090 a0001c0004t0003g0116 a0001c0004t0003g0255 a0001c0004t0003g0277 a0001c0004t0022g0254 a0001c0006t0002g0165 a0001c0006t0034g0247	21	307	0.0684	16	c.350 others(33): Show c.350+2144_350+2145insATATATATATACACAC	CHRNA7	ENSG00000175344.19	transcript	ENST00000306901.9	protein_coding	4/9			chr15	TogoVar
CHRNA7_chr15_32025515_32178018	32114047	T T	TATATATA others(9): Show TATATATACACACACAC	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01069.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0098 a0001c0003t0001g0098	1	307	0.0033	16	c.350 others(33): Show c.350+2155_350+2156insCACACACACATATATA	CHRNA7	ENSG00000175344.19	transcript	ENST00000306901.9	protein_coding	4/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
CHRNA7_chr15_32025515_32178018	32164913	T T	TAAAAAAA others(9): Show TAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG03209.hp1 HG01070.hp2 HG03209.hp1	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0009 a0001c0010t0009	a0001c0010t0009g0114 a0001c0010t0009g0190 a0001c0010t0009g0114 a0001c0010t0009g0190	2	307	0.0065	16	c.990 others(33): Show c.990+1594_990+1609dupAAAAAAAAAAAAAAAA	CHRNA7	ENSG00000175344.19	transcript	ENST00000306901.9	protein_coding	9/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
CHRNA9_chr4_40330333_40360217	40350693	T T	TACACACA others(9): Show TACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG02630.hp1 HG02717.hp1 others(6): Show HG00280.hp1 HG02630.hp1 HG02717.hp1 HG03688.hp2 NA18988.hp2 NA18989.hp2 NA18994.hp1 NA18994.hp2 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 others(1): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005	a0001c0001t0001 a0001c0002t0001 a0001c0004t0001 others(2): Show a0001c0001t0001 a0001c0002t0001 a0001c0004t0001 a0001c0004t0002 a0001c0005t0003	a0001c0001t0001g0100 a0001c0001t0001g0103 a0001c0001t0001g0126 others(6): Show a0001c0001t0001g0100 a0001c0001t0001g0103 a0001c0001t0001g0126 a0001c0001t0001g0143 a0001c0002t0001g0142 a0001c0004t0001g0076 a0001c0004t0002g0080 a0001c0005t0003g0070 a0001c0005t0003g0074	9	420	0.0214	16	c.898 others(33): Show c.898+1298_898+1313dupACACACACACACACAC	CHRNA9	ENSG00000174343.6	transcript	ENST00000310169.3	protein_coding	4/4		INFO_REALIGN_3_PRIME	chr4	TogoVar
CHRNB2_chr1_154562778_154585013	154582475	A A	AGGGGCAT others(9): Show AGGGGCATGGGGGCATG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02523.hp1 NA18985.hp2 HG02523.hp1 NA18985.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	424	0.0047	16	c.65 others(27): Show c.6543_*6544insGGGGCATGGGGGCATG	CHRNB2	ENSG00000160716.6	transcript	ENST00000368476.4	protein_coding		2463		chr1	TogoVar
CHRNB3_chr8_42692366_42742407	42717403	A A	AAAAAAAA others(9): Show AAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG02683.hp1 NA18942.hp2 NA18975.hp2 others(1): Show HG02683.hp1 NA18942.hp2 NA18975.hp2 NA18989.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0002 a0003c0003t0001 a0001c0001t0001 a0001c0001t0002 a0003c0003t0001	a0001c0001t0001g0259 a0001c0001t0001g0264 a0001c0001t0002g0203 others(1): Show a0001c0001t0001g0259 a0001c0001t0001g0264 a0001c0001t0002g0203 a0003c0003t0001g0263	4	282	0.0142	16	c.249 others(33): Show c.249+6971_249+6972insAAAAAAAAAAAAAGAA	CHRNB3	ENSG00000147432.7	transcript	ENST00000289957.3	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr8	TogoVar
CHRNB4_chr15_78619111_78646210	78626384	G G	GTGTGTGT others(9): Show GTGTGTGTGTGTGTGTT	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02922.hp1 HG02965.hp2 others(2): Show HG02717.hp2 HG02922.hp1 HG02965.hp2 HG02970.hp1 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0001t0003 a0001c0005t0001 a0001c0001t0001 a0001c0001t0003 a0001c0005t0001	a0001c0001t0001g0208 a0001c0001t0003g0107 a0001c0001t0003g0170 others(2): Show a0001c0001t0001g0208 a0001c0001t0003g0107 a0001c0001t0003g0170 a0001c0001t0003g0211 a0001c0005t0001g0120	5	416	0.0120	16	c.133 others(35): Show c.1339-1094_1339-1093insAACACACACACACACA	CHRNB4	ENSG00000117971.12	transcript	ENST00000261751.8	protein_coding	5/5			chr15	TogoVar
CHST11_chr12_104451948_104767014	104475658	T T	TTATATAT others(9): Show TTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG01243.hp1 HG02976.hp1 others(5): Show HG00558.hp2 HG01243.hp1 HG02976.hp1 HG03491.hp1 NA19002.hp2 NA19030.hp1 NA19068.hp1 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0008 a0001c0001t0009 others(5): Show a0001c0001t0003 a0001c0001t0008 a0001c0001t0009 a0001c0001t0014 a0001c0001t0022 a0001c0001t0030 a0001c0001t0049 a0001c0001t0054	a0001c0001t0003g0016 a0001c0001t0008g0024 a0001c0001t0009g0031 others(5): Show a0001c0001t0003g0016 a0001c0001t0008g0024 a0001c0001t0009g0031 a0001c0001t0014g0192 a0001c0001t0022g0185 a0001c0001t0030g0110 a0001c0001t0049g0168 a0001c0001t0054g0003	8	240	0.0333	16	c.118 others(35): Show c.118+18147_118+18162dupATATATATATATATAT	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST11_chr12_104451948_104767014	104475688	A A	ATATATAT others(9): Show ATATATATATATATATT	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01081.hp2 HG01109.hp1 others(10): Show HG00741.hp2 HG01081.hp2 HG01109.hp1 HG01884.hp2 HG02155.hp2 HG02559.hp2 HG02572.hp1 HG02896.hp2 HG03098.hp1 HG03239.hp1 HG03490.hp2 HG03942.hp2 NA18966.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0011 a0001c0001t0017 a0001c0001t0025 a0001c0001t0028 a0001c0001t0056	a0001c0001t0001g0099 a0001c0001t0002g0064 a0001c0001t0002g0076 others(10): Show a0001c0001t0001g0099 a0001c0001t0002g0064 a0001c0001t0002g0076 a0001c0001t0002g0098 a0001c0001t0003g0131 a0001c0001t0005g0028 a0001c0001t0007g0153 a0001c0001t0011g0097 a0001c0001t0017g0015 a0001c0001t0017g0065 a0001c0001t0025g0193 a0001c0001t0028g0080 a0001c0001t0056g0202	13	240	0.0542	16	c.118 others(35): Show c.118+18162_118+18163insATATATATATATTTAT	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST11_chr12_104451948_104767014	104519071	G G	GGTGTGTG others(9): Show GGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG02976.hp1 HG03471.hp2 others(3): Show HG00738.hp1 HG02976.hp1 HG03471.hp2 NA18941.hp1 NA18941.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0014 others(2): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0014 a0001c0001t0022 a0001c0001t0023	a0001c0001t0001g0023 a0001c0001t0001g0048 a0001c0001t0004g0238 others(3): Show a0001c0001t0001g0023 a0001c0001t0001g0048 a0001c0001t0004g0238 a0001c0001t0014g0192 a0001c0001t0022g0185 a0001c0001t0023g0196	6	240	0.0250	16	c.118 others(35): Show c.118+61561_118+61576dupGTGTGTGTGTGTGTGT	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST11_chr12_104451948_104767014	104544138	A A	AAAAGAAA others(9): Show AAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG02300.hp1 HG01074.hp2 HG02300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0066 a0001c0001t0001g0135 a0001c0001t0001g0066 a0001c0001t0001g0135	2	240	0.0083	16	c.119 others(35): Show c.119-57738_119-57723dupAAGAAAGAAAGAAAGA	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST11_chr12_104451948_104767014	104544769	T T	TCCCCCCC others(9): Show TCCCCCCCCCCCCCCCC	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00423.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0116 a0001c0001t0016g0116	1	240	0.0042	16	c.119 others(35): Show c.119-57131_119-57130insCCCCCCCCCCCCCCCC	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST11_chr12_104451948_104767014	104544769	T T	TCCCCCCC others(9): Show TCCCCCCCCCCGCCCCC	intron_variant intron_variant	MODIFIER	NA19060.hp1 NA19060.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0226 a0001c0001t0001g0226	1	240	0.0042	16	c.119 others(35): Show c.119-57131_119-57130insCCCCGCCCCCCCCCCC	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST11_chr12_104451948_104767014	104544769	T T	TCCCCCCC others(9): Show TCCCCCCCCCGCCCCCC	intron_variant intron_variant	MODIFIER	NA18963.hp1 NA18963.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0022 a0001c0001t0002g0022	1	240	0.0042	16	c.119 others(35): Show c.119-57131_119-57130insCCCGCCCCCCCCCCCC	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST11_chr12_104451948_104767014	104544769	T T	TCCCCCCC others(9): Show TCCCCCCCCGCCCCCCC	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00408.hp2 HG02145.hp2 others(7): Show HG00099.hp2 HG00408.hp2 HG02145.hp2 HG02258.hp1 HG03486.hp1 HG04228.hp1 NA18985.hp2 NA19068.hp2 NA19077.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0026 others(4): Show a0001c0001t0001 a0001c0001t0009 a0001c0001t0026 a0001c0001t0031 a0001c0001t0034 a0001c0001t0046 a0001c0001t0052	a0001c0001t0001g0034 a0001c0001t0001g0088 a0001c0001t0001g0164 others(7): Show a0001c0001t0001g0034 a0001c0001t0001g0088 a0001c0001t0001g0164 a0001c0001t0001g0166 a0001c0001t0009g0085 a0001c0001t0026g0026 a0001c0001t0031g0010 a0001c0001t0034g0173 a0001c0001t0046g0079 a0001c0001t0052g0071	10	240	0.0417	16	c.119 others(35): Show c.119-57131_119-57130insCCGCCCCCCCCCCCCC	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST11_chr12_104451948_104767014	104553568	C C	CGAGAGAG others(9): Show CGAGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG03139.hp1 HG02965.hp2 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0029 a0001c0001t0002 a0001c0001t0029	a0001c0001t0002g0217 a0001c0001t0029g0212 a0001c0001t0002g0217 a0001c0001t0029g0212	2	240	0.0083	16	c.119 others(35): Show c.119-48320_119-48305dupAGAGAGAGAGAGAGAG	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr12	TogoVar

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