Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	status	chr	external
CNTNAP2_chr7_146111801_148425998	146352750	G G	GTTTTTTT others(9): Show GTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03139.hp2 NA20129.hp1 HG03139.hp2 NA20129.hp1	a0001 a0001	a0001c0006 a0001c0011 a0001c0006 a0001c0011	a0001c0006t0009 a0001c0011t0016 a0001c0006t0009 a0001c0011t0016	a0001c0006t0009g0028 a0001c0011t0016g0019 a0001c0006t0009g0028 a0001c0011t0016g0019	2	40	0.0500	16	c.97+ others(35): Show c.97+235783_97+235798dupTTTTTTTTTTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146395779	T T	TAGATGAT others(9): Show TAGATGATAGAGAGATA	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0002 a0002	a0002c0017 a0002c0017	a0002c0017t0015 a0002c0017t0015	a0002c0017t0015g0037 a0002c0017t0015g0037	1	40	0.0250	16	c.97+ others(35): Show c.97+278806_97+278807insAGATGATAGAGAGATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23		chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146422359	G G	GTGTATAT others(9): Show GTGTATATATATATATA	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0021 a0001c0002t0001g0021	1	40	0.0250	16	c.97+ others(35): Show c.97+305387_97+305388insGTATATATATATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146426185	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0016 a0001c0011t0016	a0001c0011t0016g0019 a0001c0011t0016g0019	1	40	0.0250	16	c.97+ others(35): Show c.97+309222_97+309237dupAAAAAAAAAAAAAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146443230	T T	TAATAAAT others(9): Show TAATAAATAAATAAATA	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0002 a0002	a0002c0016 a0002c0016	a0002c0016t0004 a0002c0016t0004	a0002c0016t0004g0024 a0002c0016t0004g0024	1	40	0.0250	16	c.97+ others(35): Show c.97+326270_97+326285dupAATAAATAAATAAATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146450935	A A	ATATTTAT others(9): Show ATATTTATTTATTTATT	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02896.hp2 HG02897.hp1 others(2): Show HG02451.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp2	a0001 a0001	a0001c0002 a0001c0004 a0001c0002 a0001c0004	a0001c0002t0001 a0001c0004t0003 a0001c0004t0005 a0001c0002t0001 a0001c0004t0003 a0001c0004t0005	a0001c0002t0001g0007 a0001c0002t0001g0008 a0001c0004t0003g0035 others(2): Show a0001c0002t0001g0007 a0001c0002t0001g0008 a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0004t0005g0004	5	40	0.1250	16	c.98- others(35): Show c.98-323322_98-323307dupATTTATTTATTTATTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146464187	G G	GTTTTTTT others(9): Show GTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0004 a0004	a0004c0014 a0004c0014	a0004c0014t0021 a0004c0014t0021	a0004c0014t0021g0022 a0004c0014t0021g0022	1	40	0.0250	16	c.98- others(35): Show c.98-310080_98-310065dupTTTTTTTTTTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146535154	A A	AATATATA others(9): Show AATATATATTATCTAAT	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02451.hp1 HG02630.hp2 others(3): Show HG01891.hp2 HG02451.hp1 HG02630.hp2 HG02896.hp1 HG02976.hp1 HG03139.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0008 others(2): Show a0001c0001 a0001c0002 a0001c0008 a0001c0015 a0005c0020	a0001c0001t0006 a0001c0002t0001 a0001c0002t0002 others(3): Show a0001c0001t0006 a0001c0002t0001 a0001c0002t0002 a0001c0008t0001 a0001c0015t0001 a0005c0020t0005	a0001c0001t0006g0009 a0001c0002t0001g0007 a0001c0002t0002g0013 others(3): Show a0001c0001t0006g0009 a0001c0002t0001g0007 a0001c0002t0002g0013 a0001c0008t0001g0025 a0001c0015t0001g0011 a0005c0020t0005g0016	6	40	0.1500	16	c.98- others(35): Show c.98-239111_98-239110insATTATCTAATATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146599743	G G	GAGATAGA others(9): Show GAGATAGATAGATAGAT	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02630.hp2 HG02717.hp2 others(1): Show HG01891.hp1 HG02630.hp2 HG02717.hp2 HG03098.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0001c0005 others(1): Show a0001c0001 a0001c0002 a0001c0005 a0004c0014	a0001c0001t0001 a0001c0002t0002 a0001c0005t0008 others(1): Show a0001c0001t0001 a0001c0002t0002 a0001c0005t0008 a0004c0014t0021	a0001c0001t0001g0003 a0001c0002t0002g0013 a0001c0005t0008g0005 others(1): Show a0001c0001t0001g0003 a0001c0002t0002g0013 a0001c0005t0008g0005 a0004c0014t0021g0022	4	40	0.1000	16	c.98- others(35): Show c.98-174503_98-174488dupAGATAGATAGATAGAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146721875	G G	GTGTGTGT others(9): Show GTGTGTGTATGTATATA	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0004 a0001c0012t0004	a0001c0012t0004g0026 a0001c0012t0004g0026	1	40	0.0250	16	c.98- others(33): Show c.98-52395_98-52394insGTGTGTATGTATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146760409	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG03239.hp1 HG02897.hp1 HG03239.hp1	a0001 a0003 a0001 a0003	a0001c0002 a0003c0007 a0001c0002 a0003c0007	a0001c0002t0001 a0003c0007t0017 a0001c0002t0001 a0003c0007t0017	a0001c0002t0001g0008 a0003c0007t0017g0031 a0001c0002t0001g0008 a0003c0007t0017g0031	2	40	0.0500	16	c.98- others(33): Show c.98-13844_98-13829dupTTTTTTTTTTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147317800	A A	ATATGTGT others(9): Show ATATGTGTATATATGTG	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02896.hp1 HG02976.hp1 others(3): Show HG02717.hp2 HG02896.hp1 HG02976.hp1 HG03139.hp1 HG03239.hp1 NA20129.hp1	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0005 a0001c0006 a0001c0008 others(3): Show a0001c0005 a0001c0006 a0001c0008 a0001c0015 a0003c0007 a0005c0020	a0001c0005t0008 a0001c0006t0009 a0001c0008t0001 others(3): Show a0001c0005t0008 a0001c0006t0009 a0001c0008t0001 a0001c0015t0001 a0003c0007t0017 a0005c0020t0005	a0001c0005t0008g0005 a0001c0006t0009g0028 a0001c0008t0001g0025 others(3): Show a0001c0005t0008g0005 a0001c0006t0009g0028 a0001c0008t0001g0025 a0001c0015t0001g0011 a0003c0007t0017g0031 a0005c0020t0005g0016	6	40	0.1500	16	c.149 others(37): Show c.1498+17515_1498+17516insGTATATATGTGTATGT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	9/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147347461	T T	TATATATA others(9): Show TATATATATATATATGC	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0018 a0001c0001t0007g0018	1	40	0.0250	16	c.149 others(37): Show c.1498+47196_1498+47211dupATATATGCATATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	9/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147421585	C C	CTGTGTGT others(9): Show CTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0034 a0001c0001t0012g0034	1	40	0.0250	16	c.167 others(37): Show c.1670+25819_1670+25834dupGTGTGTGTGTGTGTGT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	10/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147469506	A A	ATTTTTTT others(9): Show ATTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0011 a0001c0003t0011	a0001c0003t0011g0023 a0001c0003t0011g0023	1	40	0.0250	16	c.167 others(37): Show c.1671-16418_1671-16403dupTTTTTTTTTTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	10/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147486889	C C	CTGTGTGT others(9): Show CTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02486.hp1 HG02630.hp2 others(3): Show HG01891.hp2 HG02486.hp1 HG02630.hp2 HG02896.hp2 HG02897.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 others(2): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 a0001c0002t0002 a0001c0004t0003	a0001c0001t0001g0038 a0001c0001t0006g0009 a0001c0001t0007g0020 others(3): Show a0001c0001t0001g0038 a0001c0001t0006g0009 a0001c0001t0007g0020 a0001c0002t0002g0013 a0001c0004t0003g0035 a0001c0004t0003g0036	6	40	0.1500	16	c.177 others(33): Show c.1777+860_1777+875dupGTGTGTGTGTGTGTGT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	11/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147510850	C C	CATATATA others(9): Show CATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp2 HG02486.hp1 others(3): Show HG00735.hp1 HG00735.hp2 HG02486.hp1 HG02630.hp2 HG03239.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 others(1): Show a0001c0001 a0001c0002 a0001c0006 a0001c0019	a0001c0001t0001 a0001c0001t0007 a0001c0002t0002 others(2): Show a0001c0001t0001 a0001c0001t0007 a0001c0002t0002 a0001c0006t0014 a0001c0019t0006	a0001c0001t0001g0038 a0001c0001t0007g0020 a0001c0002t0002g0013 others(3): Show a0001c0001t0001g0038 a0001c0001t0007g0020 a0001c0002t0002g0013 a0001c0002t0002g0040 a0001c0006t0014g0033 a0001c0019t0006g0015	6	40	0.1500	16	c.177 others(37): Show c.1777+24815_1777+24830dupTATATATATATATATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	11/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147527015	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0015 a0001c0015	a0001c0015t0001 a0001c0015t0001	a0001c0015t0001g0011 a0001c0015t0001g0011	1	40	0.0250	16	c.177 others(37): Show c.1778-35111_1778-35096dupTTTTTTTTTTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	11/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147560168	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03239.hp2 HG03098.hp2 HG03239.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0002 a0001c0002t0001 a0001c0002t0002	a0001c0002t0001g0021 a0001c0002t0002g0040 a0001c0002t0001g0021 a0001c0002t0002g0040	2	40	0.0500	16	c.177 others(35): Show c.1778-1962_1778-1947dupAAAAAAAAAAAAAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	11/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147583531	T T	TATATATA others(9): Show TATATATATATATATAA	intron_variant intron_variant	MODIFIER	HG03098.hp1 NA18522.hp1 HG03098.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0013 a0001c0001 a0001c0013	a0001c0001t0001 a0001c0013t0003 a0001c0001t0001 a0001c0013t0003	a0001c0001t0001g0003 a0001c0013t0003g0039 a0001c0001t0001g0003 a0001c0013t0003g0039	2	40	0.0500	16	c.189 others(37): Show c.1897+21275_1897+21276insTATATATATATATAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	12/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147784381	C C	CATATATA others(9): Show CATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0004 a0004	a0004c0014 a0004c0014	a0004c0014t0021 a0004c0014t0021	a0004c0014t0021g0022 a0004c0014t0021g0022	1	40	0.0250	16	c.209 others(39): Show c.2099-119173_2099-119158dupATATATATATATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	13/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147886475	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0011 a0001c0003t0011	a0001c0003t0011g0023 a0001c0003t0011g0023	1	40	0.0250	16	c.209 others(37): Show c.2099-17077_2099-17062dupAAAAAAAAAAAAAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	13/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147919459	C C	CTTTCTTT others(9): Show CTTTCTTTCTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0001 a0001c0008t0001	a0001c0008t0001g0025 a0001c0008t0001g0025	1	40	0.0250	16	c.225 others(37): Show c.2255+15741_2255+15742insCTTTCTTTTTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	14/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147949440	G G	GTATATAT others(9): Show GTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG03098.hp2 HG02897.hp1 HG03098.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0008 a0001c0002t0001g0021 a0001c0002t0001g0008 a0001c0002t0001g0021	2	40	0.0500	16	c.225 others(37): Show c.2256-28418_2256-28403dupATATATATATATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	14/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147973160	T T	TAAAAAAA others(9): Show TAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0004 a0001c0012t0004	a0001c0012t0004g0026 a0001c0012t0004g0026	1	40	0.0250	16	c.225 others(35): Show c.2256-4696_2256-4681dupAAAAAAAAAAAAAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	14/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147981786	G G	GGTGTGTG others(9): Show GGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0004 a0001c0012t0004	a0001c0012t0004g0026 a0001c0012t0004g0026	1	40	0.0250	16	c.238 others(35): Show c.2383+3813_2383+3828dupTGTGTGTGTGTGTGTG	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	15/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148106493	G G	GAGAGAGA others(9): Show GAGAGAGATAGATATAT	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02717.hp2 HG02630.hp1 HG02717.hp2	a0001 a0001	a0001c0005 a0001c0012 a0001c0005 a0001c0012	a0001c0005t0008 a0001c0012t0004 a0001c0005t0008 a0001c0012t0004	a0001c0005t0008g0005 a0001c0012t0004g0026 a0001c0005t0008g0005 a0001c0012t0004g0026	2	40	0.0500	16	c.238 others(37): Show c.2384-11624_2384-11623insGAGAGATAGATATATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	15/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148106493	G G	GATATATA others(9): Show GATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp2 HG02896.hp2 HG02897.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0003 a0001c0004t0003	a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0004t0003g0035 a0001c0004t0003g0036	2	40	0.0500	16	c.238 others(37): Show c.2384-11613_2384-11598dupTATATATATATATATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	15/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148136017	A A	AAGGAAGG others(9): Show AAGGAAGGAAGGGAGGG	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0002 a0001c0010t0002	a0001c0010t0002g0014 a0001c0010t0002g0014	1	40	0.0250	16	c.255 others(37): Show c.2555-11471_2555-11470insAAGGAAGGGAGGGAGG	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	16/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148136017	A A	AAGGAAGG others(9): Show AAGGAAGGGAGGGAGGG	intron_variant intron_variant	MODIFIER	HG03239.hp2 HG03239.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0040 a0001c0002t0002g0040	1	40	0.0250	16	c.255 others(37): Show c.2555-11471_2555-11470insAAGGGAGGGAGGGAGG	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	16/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148136017	A A	AAGGGAGG others(9): Show AAGGGAGGGAGGGAGGG	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0034 a0001c0001t0012g0034	1	40	0.0250	16	c.255 others(37): Show c.2555-11457_2555-11442dupAGGGAGGGAGGGAGGG	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	16/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148137669	A A	AAAGGAAG others(9): Show AAAGGAAGGAAGGAAGG	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0001 a0001c0001t0018g0001	1	40	0.0250	16	c.255 others(35): Show c.2555-9769_2555-9754dupAAGGAAGGAAGGAAGG	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	16/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148187147	C C	CACACACA others(9): Show CACACACACACACACAA	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp2 HG02896.hp2 HG02897.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0003 a0001c0004t0003	a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0004t0003g0035 a0001c0004t0003g0036	2	40	0.0500	16	c.301 others(37): Show c.3010+14670_3010+14671insCACACACACACACAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	18/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148283255	A A	AAAAGAAA others(9): Show AAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0034 a0001c0001t0012g0034	1	40	0.0250	16	c.347 others(37): Show c.3475+16166_3475+16181dupAAAGAAAGAAAGAAAG	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	21/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148297165	A A	AAAGGAAG others(9): Show AAAGGAAGGAAGGAAGG	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp2 HG02897.hp1 HG02451.hp1 HG02451.hp2 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0002g0006 a0001c0002t0001g0007 a0001c0002t0001g0008 a0001c0001t0002g0006 a0001c0002t0001g0007 a0001c0002t0001g0008	3	40	0.0750	16	c.347 others(37): Show c.3475+30066_3475+30081dupGGAAGGAAGGAAGGAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	21/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148297197	G G	GAAGGAAG others(9): Show GAAGGAAGGAAGGAAGC	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0019 a0001c0009t0019	a0001c0009t0019g0027 a0001c0009t0019g0027	1	40	0.0250	16	c.347 others(37): Show c.3475+30081_3475+30082insGGAAGCAAGGAAGGAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	21/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148405420	A A	ATTTTTTT others(9): Show ATTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG03139.hp1 HG00735.hp2 HG03139.hp1	a0001 a0001	a0001c0008 a0001c0019 a0001c0008 a0001c0019	a0001c0008t0001 a0001c0019t0006 a0001c0008t0001 a0001c0019t0006	a0001c0008t0001g0025 a0001c0019t0006g0015 a0001c0008t0001g0025 a0001c0019t0006g0015	2	40	0.0500	16	c.371 others(35): Show c.3716-3960_3716-3945dupTTTTTTTTTTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	22/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP3B_chr9_41885536_42134426	41934100	C C	CATATATA others(9): Show CATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01516.hp2 HG01943.hp2 others(6): Show HG00280.hp1 HG01516.hp2 HG01943.hp2 HG01952.hp2 HG01981.hp1 HG02486.hp1 HG02717.hp1 HG04115.hp2 NA20905.hp2	a0001 a0002 a0010 others(1): Show a0001 a0002 a0010 a0032	a0001c0001 a0001c0012 a0001c0042 others(3): Show a0001c0001 a0001c0012 a0001c0042 a0002c0002 a0010c0013 a0032c0039	a0001c0001t0003 a0001c0012t0002 a0001c0042t0013 others(3): Show a0001c0001t0003 a0001c0012t0002 a0001c0042t0013 a0002c0002t0001 a0010c0013t0003 a0032c0039t0014	a0001c0001t0003g0096 a0001c0001t0003g0097 a0001c0001t0003g0099 others(6): Show a0001c0001t0003g0096 a0001c0001t0003g0097 a0001c0001t0003g0099 a0001c0001t0003g0104 a0001c0012t0002g0009 a0001c0042t0013g0001 a0002c0002t0001g0065 a0010c0013t0003g0103 a0032c0039t0014g0025	9	108	0.0833	16	c.223 others(35): Show c.2237+4128_2237+4143dupATATATATATATATAT	CNTNAP3B	ENSG00000154529.15	transcript	ENST00000377561.7	protein_coding	14/23		chr9	TogoVar
CNTNAP3B_chr9_41885536_42134426	41996187	C C	CCGATTAG others(9): Show CCGATTAGGCTTCCTTA	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0007 a0007	a0007c0016 a0007c0016	a0007c0016t0001 a0007c0016t0001	a0007c0016t0001g0036 a0007c0016t0001g0036	1	108	0.0093	16	c.107 others(31): Show c.1071+17_1071+18insTAAGGAAGCCTAATCG	CNTNAP3B	ENSG00000154529.15	transcript	ENST00000377561.7	protein_coding	7/23		chr9	TogoVar
CNTNAP3B_chr9_41885536_42134426	42030750	C C	CAGAGAGA others(9): Show CAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03669.hp1 HG03453.hp1 HG03669.hp1	a0002 a0008 a0002 a0008	a0002c0002 a0008c0006 a0002c0002 a0008c0006	a0002c0002t0001 a0008c0006t0010 a0002c0002t0001 a0008c0006t0010	a0002c0002t0001g0040 a0008c0006t0010g0071 a0002c0002t0001g0040 a0008c0006t0010g0071	2	108	0.0185	16	c.391 others(35): Show c.391-17241_391-17226dupCTCTCTCTCTCTCTCT	CNTNAP3B	ENSG00000154529.15	transcript	ENST00000377561.7	protein_coding	3/23		chr9	TogoVar
CNTNAP3B_chr9_41885536_42134426	42030813	G G	GGAGAGAG others(9): Show GGAGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0012 a0001c0001t0017g0012	1	108	0.0093	16	c.391 others(35): Show c.391-17304_391-17289dupTCTCTCTCTCTCTCTC	CNTNAP3B	ENSG00000154529.15	transcript	ENST00000377561.7	protein_coding	3/23		chr9	TogoVar
CNTNAP3B_chr9_41885536_42134426	42034174	G G	GTATCTAT others(9): Show GTATCTATCTATCTATC	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0042 a0001c0042	a0001c0042t0013 a0001c0042t0013	a0001c0042t0013g0001 a0001c0042t0013g0001	1	108	0.0093	16	c.391 others(35): Show c.391-20650_391-20649insGATAGATAGATAGATA	CNTNAP3B	ENSG00000154529.15	transcript	ENST00000377561.7	protein_coding	3/23		chr9	TogoVar
CNTNAP3B_chr9_41885536_42134426	42034186	G G	GTATCTAT others(9): Show GTATCTATCTATCTATC	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01071.hp2 HG01943.hp2 others(3): Show HG00642.hp2 HG01071.hp2 HG01943.hp2 HG02109.hp2 HG03704.hp2 NA19090.hp1	a0001 a0027 a0001 a0027	a0001c0001 a0001c0012 a0027c0026 a0001c0001 a0001c0012 a0027c0026	a0001c0001t0002 a0001c0001t0003 a0001c0001t0017 others(2): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0017 a0001c0012t0002 a0027c0026t0020	a0001c0001t0002g0004 a0001c0001t0002g0018 a0001c0001t0003g0093 others(3): Show a0001c0001t0002g0004 a0001c0001t0002g0018 a0001c0001t0003g0093 a0001c0001t0017g0012 a0001c0012t0002g0009 a0027c0026t0020g0027	6	108	0.0556	16	c.391 others(35): Show c.391-20677_391-20662dupGATAGATAGATAGATA	CNTNAP3B	ENSG00000154529.15	transcript	ENST00000377561.7	protein_coding	3/23		chr9	TogoVar
CNTNAP3B_chr9_41885536_42134426	42089145	G G	GAAAGGGA others(9): Show GAAAGGGAGAAAGGGGA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00558.hp1 others(39): Show HG00099.hp2 HG00280.hp1 HG00558.hp1 HG00642.hp2 HG00735.hp1 HG01071.hp2 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01175.hp1 HG01255.hp1 HG01516.hp2 HG01943.hp2 HG01952.hp2 HG01981.hp1 HG02040.hp1 HG02040.hp2 HG02056.hp2 HG02083.hp1 HG02135.hp1 HG02145.hp2 HG02273.hp2 HG02486.hp1 HG02486.hp2 HG02717.hp1 HG03239.hp1 HG03453.hp2 HG03490.hp2 HG03669.hp2 HG03704.hp2 HG03831.hp2 HG03834.hp1 HG03942.hp2 NA18947.hp1 NA18947.hp2 NA18949.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp2 NA18974.hp1 NA19090.hp1 NA20905.hp2	a0001 a0006 a0009 others(8): Show a0001 a0006 a0009 a0010 a0011 a0029 a0030 a0031 a0032 a0033 a0034	a0001c0001 a0001c0012 a0001c0042 others(14): Show a0001c0001 a0001c0012 a0001c0042 a0001c0043 a0001c0046 a0006c0007 a0006c0041 a0009c0008 a0010c0013 a0011c0037 a0011c0040 a0029c0045 a0030c0035 a0031c0044 a0032c0039 a0033c0036 a0034c0038	a0001c0001t0002 a0001c0001t0003 a0001c0001t0017 others(19): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0017 a0001c0001t0018 a0001c0001t0031 a0001c0012t0002 a0001c0042t0013 a0001c0043t0015 a0001c0046t0016 a0006c0007t0002 a0006c0007t0011 a0006c0041t0002 a0009c0008t0009 a0010c0013t0003 a0011c0037t0007 a0011c0040t0007 a0029c0045t0002 a0030c0035t0007 a0031c0044t0009 a0032c0039t0014 a0033c0036t0007 a0034c0038t0002	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0005 others(39): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0005 a0001c0001t0002g0006 a0001c0001t0002g0011 a0001c0001t0002g0018 a0001c0001t0002g0022 a0001c0001t0002g0024 a0001c0001t0003g0093 a0001c0001t0003g0095 a0001c0001t0003g0096 a0001c0001t0003g0097 a0001c0001t0003g0099 a0001c0001t0003g0100 a0001c0001t0003g0101 a0001c0001t0003g0102 a0001c0001t0003g0104 a0001c0001t0017g0012 a0001c0001t0018g0026 a0001c0001t0031g0098 a0001c0012t0002g0007 a0001c0012t0002g0009 a0001c0042t0013g0001 a0001c0043t0015g0013 a0001c0046t0016g0015 a0006c0007t0002g0014 a0006c0007t0011g0017 a0006c0007t0011g0021 a0006c0041t0002g0020 a0009c0008t0009g0105 a0009c0008t0009g0106 a0009c0008t0009g0107 a0010c0013t0003g0103 a0010c0013t0003g0108 a0011c0037t0007g0008 a0011c0040t0007g0003 a0029c0045t0002g0019 a0030c0035t0007g0023 a0031c0044t0009g0094 a0032c0039t0014g0025 a0033c0036t0007g0010 a0034c0038t0002g0016	42	108	0.3889	16	c.197 others(35): Show c.197-12084_197-12083insTCCCCTTTCTCCCTTT	CNTNAP3B	ENSG00000154529.15	transcript	ENST00000377561.7	protein_coding	2/23		chr9	TogoVar
CNTNAP4_chr16_76272401_76565757	76376907	T T	TTGTGTGT others(9): Show TTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	NA18960.hp2 NA18960.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0222 a0001c0004t0001g0222	1	274	0.0037	16	c.390 others(35): Show c.390+21428_390+21443dupGTGTGTGTGTGTGTGT	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76397938	T T	TTATGTAT others(9): Show TTATGTATATATATATA	intron_variant intron_variant	MODIFIER	HG02074.hp1 HG02074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0126 a0001c0001t0003g0126	1	274	0.0037	16	c.391 others(35): Show c.391-29511_391-29510insGTATATATATATATAT	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76436961	A A	ATATCTAT others(9): Show ATATCTATCTATCTATC	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00738.hp1 others(23): Show HG00099.hp1 HG00099.hp2 HG00738.hp1 HG01074.hp1 HG01081.hp1 HG01255.hp1 HG01928.hp1 HG01934.hp1 HG01981.hp2 HG02630.hp2 HG02647.hp1 HG02698.hp1 HG03453.hp1 HG03486.hp2 HG03516.hp1 HG04115.hp2 HG04204.hp1 HG04204.hp2 NA18994.hp2 NA19002.hp2 NA19007.hp2 NA19009.hp1 NA19085.hp1 NA20129.hp2 NA20905.hp1 NA21309.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0005 a0006 a0009	a0001c0001 a0001c0004 a0001c0018 others(7): Show a0001c0001 a0001c0004 a0001c0018 a0002c0002 a0002c0005 a0003c0003 a0004c0027 a0005c0008 a0006c0009 a0009c0044	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(12): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0010 a0001c0001t0016 a0001c0004t0001 a0001c0018t0001 a0002c0002t0002 a0002c0002t0004 a0002c0005t0004 a0003c0003t0007 a0004c0027t0002 a0005c0008t0001 a0006c0009t0004 a0009c0044t0006	a0001c0001t0001g0017 a0001c0001t0001g0037 a0001c0001t0001g0056 others(23): Show a0001c0001t0001g0017 a0001c0001t0001g0037 a0001c0001t0001g0056 a0001c0001t0001g0081 a0001c0001t0001g0092 a0001c0001t0001g0200 a0001c0001t0003g0064 a0001c0001t0003g0175 a0001c0001t0003g0235 a0001c0001t0005g0046 a0001c0001t0010g0240 a0001c0001t0016g0088 a0001c0004t0001g0155 a0001c0004t0001g0170 a0001c0018t0001g0106 a0002c0002t0002g0039 a0002c0002t0002g0059 a0002c0002t0002g0136 a0002c0002t0002g0224 a0002c0002t0004g0138 a0002c0005t0004g0132 a0003c0003t0007g0259 a0004c0027t0002g0234 a0005c0008t0001g0091 a0006c0009t0004g0273 a0009c0044t0006g0247	26	274	0.0949	16	c.538 others(33): Show c.538+9372_538+9387dupATCTATCTATCTATCT	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	4/23	INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76436989	C C	CTATCTAT others(9): Show CTATCTATCTATCTATT	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp1 HG00438.hp1 others(32): Show HG00408.hp1 HG00423.hp1 HG00438.hp1 HG00597.hp1 HG00621.hp2 HG00741.hp2 HG01106.hp1 HG01934.hp2 HG02040.hp2 HG02132.hp1 HG03017.hp2 HG03041.hp2 HG03491.hp2 HG03579.hp2 HG03942.hp1 HG04115.hp1 NA18612.hp2 NA18943.hp2 NA18944.hp2 NA18962.hp2 NA18970.hp2 NA18981.hp1 NA18981.hp2 NA19003.hp1 NA19007.hp1 NA19011.hp2 NA19056.hp1 NA19060.hp2 NA19062.hp2 NA19063.hp1 NA19066.hp1 NA19077.hp1 NA19082.hp1 NA19091.hp1 NA20905.hp2	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0004 a0006 a0007 a0019 a0020 a0023	a0001c0001 a0001c0004 a0002c0002 others(8): Show a0001c0001 a0001c0004 a0002c0002 a0002c0005 a0003c0006 a0004c0010 a0006c0009 a0007c0013 a0019c0032 a0020c0035 a0023c0024	a0001c0001t0001 a0001c0001t0003 a0001c0001t0012 others(16): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0012 a0001c0004t0001 a0001c0004t0003 a0002c0002t0004 a0002c0005t0002 a0002c0005t0004 a0003c0006t0001 a0003c0006t0003 a0003c0006t0006 a0004c0010t0002 a0004c0010t0029 a0006c0009t0001 a0006c0009t0003 a0007c0013t0004 a0019c0032t0001 a0020c0035t0001 a0023c0024t0001	a0001c0001t0001g0076 a0001c0001t0001g0119 a0001c0001t0001g0151 others(32): Show a0001c0001t0001g0076 a0001c0001t0001g0119 a0001c0001t0001g0151 a0001c0001t0001g0232 a0001c0001t0003g0256 a0001c0001t0012g0117 a0001c0004t0001g0107 a0001c0004t0001g0137 a0001c0004t0001g0165 a0001c0004t0003g0084 a0001c0004t0003g0156 a0001c0004t0003g0213 a0002c0002t0004g0129 a0002c0002t0004g0150 a0002c0002t0004g0153 a0002c0002t0004g0252 a0002c0002t0004g0253 a0002c0005t0002g0080 a0002c0005t0002g0101 a0002c0005t0002g0257 a0002c0005t0004g0154 a0003c0006t0001g0005 a0003c0006t0001g0044 a0003c0006t0001g0112 a0003c0006t0003g0134 a0003c0006t0006g0063 a0004c0010t0002g0085 a0004c0010t0002g0086 a0004c0010t0029g0241 a0006c0009t0001g0023 a0006c0009t0003g0031 a0007c0013t0004g0035 a0019c0032t0001g0013 a0020c0035t0001g0029 a0023c0024t0001g0096	35	274	0.1277	16	c.538 others(33): Show c.538+9396_538+9397insTCTATCTATTTATCTA	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	4/23	INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76451599	A A	ATGTGTGT others(9): Show ATGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG03195.hp2 NA18962.hp1 others(2): Show HG00738.hp2 HG03195.hp2 NA18962.hp1 NA19011.hp2 NA20905.hp1	a0001 a0002 a0023 a0001 a0002 a0023	a0001c0001 a0002c0002 a0002c0011 others(1): Show a0001c0001 a0002c0002 a0002c0011 a0023c0024	a0001c0001t0005 a0002c0002t0002 a0002c0011t0005 others(1): Show a0001c0001t0005 a0002c0002t0002 a0002c0011t0005 a0023c0024t0001	a0001c0001t0005g0163 a0002c0002t0002g0039 a0002c0002t0002g0167 others(2): Show a0001c0001t0005g0163 a0002c0002t0002g0039 a0002c0002t0002g0167 a0002c0011t0005g0139 a0023c0024t0001g0096	5	274	0.0183	16	c.107 others(33): Show c.1072-889_1072-874dupGTGTGTGTGTGTGTGT	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	7/23	INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76460773	A A	AAAAAAAA others(9): Show AAAAAAAAAAAATATAT	intron_variant intron_variant	MODIFIER	HG02155.hp1 HG02155.hp1	a0005 a0005	a0005c0008 a0005c0008	a0005c0008t0001 a0005c0008t0001	a0005c0008t0001g0108 a0005c0008t0001g0108	1	274	0.0037	16	c.133 others(35): Show c.1334-1182_1334-1181insAAAAAAAAAATATATA	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	8/23	INFO_REALIGN_3_PRIME	chr16	TogoVar

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