regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
COL4A4_chr2_226997714_227169205 | 227041838 | A | AAGAAAGA others(9): Show |
intron_variant | MODIFIER | HG01261.hp2 | a0002 | a0002c0002 | a0002c0002t0026 | a0002c0002t0026g0232 | 1 | 284 | 0.0035 | 16 | c.350 others(33): Show |
COL4A4 | ENSG00000081052.14 | transcript | ENST00000396625.5 | protein_coding | 37/47 | chr2 | TogoVar | ||||||
COL4A4_chr2_226997714_227169205 | 227041848 | G | GAGAAAGA others(9): Show |
intron_variant | MODIFIER | HG00558.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0124 | 1 | 284 | 0.0035 | 16 | c.350 others(33): Show |
COL4A4 | ENSG00000081052.14 | transcript | ENST00000396625.5 | protein_coding | 37/47 | chr2 | TogoVar | ||||||
COL4A4_chr2_226997714_227169205 | 227047731 | C | CCACACAC others(9): Show |
intron_variant | MODIFIER | HG01123.hp2 HG01169.hp2 HG01192.hp2 others(7): Show |
a0002a0004a0024others(1): Show | a0002c0002a0004c0004a0024c0069others(1): Show | a0002c0002t0002a0004c0004t0002a0024c0069t0002others(1): Show | a0002c0002t0002g0009a0002c0002t0002g0113a0002c0002t0002g0205others(7): Show | 10 | 284 | 0.0352 | 16 | c.321 others(33): Show |
COL4A4 | ENSG00000081052.14 | transcript | ENST00000396625.5 | protein_coding | 34/47 | chr2 | TogoVar | ||||||
COL4A4_chr2_226997714_227169205 | 227089588 | C | CATATATA others(9): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00323.hp2 others(12): Show |
a0002a0003a0009others(1): Show | a0002c0002a0002c0021a0003c0003others(4): Show | a0002c0002t0002a0002c0002t0005a0002c0021t0002others(5): Show | a0002c0002t0002g0072a0002c0002t0002g0074a0002c0002t0002g0210others(12): Show | 15 | 284 | 0.0528 | 16 | c.145 others(33): Show |
COL4A4 | ENSG00000081052.14 | transcript | ENST00000396625.5 | protein_coding | 21/47 | chr2 | TogoVar | ||||||
COL4A5_chrX_108434838_108702545 | 108473633 | A | ATATATAT others(9): Show |
intron_variant | MODIFIER | HG00423.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0189 | 1 | 269 | 0.0037 | 16 | c.81+ others(33): Show |
COL4A5 | ENSG00000188153.14 | transcript | ENST00000328300.11 | protein_coding | 1/52 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
COL4A5_chrX_108434838_108702545 | 108473633 | A | ATATATAT others(9): Show |
intron_variant | MODIFIER | HG00280.hp1 HG01167.hp1 NA18942.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0083a0001c0001t0001g0086a0001c0001t0001g0183others(2): Show | 5 | 269 | 0.0186 | 16 | c.81+ others(33): Show |
COL4A5 | ENSG00000188153.14 | transcript | ENST00000328300.11 | protein_coding | 1/52 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
COL4A5_chrX_108434838_108702545 | 108473633 | A | ATATATAT others(9): Show |
intron_variant | MODIFIER | HG02056.hp1 HG03579.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001a0001c0001t0001g0238 | 2 | 269 | 0.0074 | 16 | c.81+ others(33): Show |
COL4A5 | ENSG00000188153.14 | transcript | ENST00000328300.11 | protein_coding | 1/52 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
COL4A6_chrX_108150614_108443422 | 108300724 | C | CGTGTGTG others(9): Show |
intron_variant | MODIFIER | HG01975.hp2 HG01978.hp1 HG02083.hp1 others(19): Show |
a0001a0002a0006 | a0001c0001a0002c0003a0006c0007 | a0001c0001t0001a0001c0001t0002a0002c0003t0001others(3): Show | a0001c0001t0001g0075a0001c0001t0001g0153a0001c0001t0002g0012others(19): Show | 22 | 234 | 0.0940 | 16 | c.144 others(35): Show |
COL4A6 | ENSG00000197565.17 | transcript | ENST00000334504.12 | protein_coding | 3/44 | chrX | TogoVar | ||||||
COL4A6_chrX_108150614_108443422 | 108343165 | A | AGTGTGTG others(9): Show |
intron_variant | MODIFIER | NA21309.hp1 | a0002 | a0002c0003 | a0002c0003t0003 | a0002c0003t0003g0031 | 1 | 234 | 0.0043 | 16 | c.64- others(33): Show |
COL4A6 | ENSG00000197565.17 | transcript | ENST00000334504.12 | protein_coding | 2/44 | chrX | TogoVar | ||||||
COL4A6_chrX_108150614_108443422 | 108343165 | A | ATAGTGTG others(9): Show |
intron_variant | MODIFIER | HG03098.hp1 | a0002 | a0002c0011 | a0002c0011t0003 | a0002c0011t0003g0033 | 1 | 234 | 0.0043 | 16 | c.64- others(33): Show |
COL4A6 | ENSG00000197565.17 | transcript | ENST00000334504.12 | protein_coding | 2/44 | chrX | TogoVar | ||||||
COL4A6_chrX_108150614_108443422 | 108343165 | A | ATATATAG others(9): Show |
intron_variant | MODIFIER | NA18960.hp1 | a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0028 | 1 | 234 | 0.0043 | 16 | c.64- others(33): Show |
COL4A6 | ENSG00000197565.17 | transcript | ENST00000334504.12 | protein_coding | 2/44 | chrX | TogoVar | ||||||
COL4A6_chrX_108150614_108443422 | 108343165 | A | ATATATAT others(9): Show |
intron_variant | MODIFIER | NA18612.hp1 NA18944.hp1 NA19056.hp1 |
a0002 | a0002c0003 | a0002c0003t0001a0002c0003t0002 | a0002c0003t0001g0021a0002c0003t0002g0023a0002c0003t0002g0034 | 3 | 234 | 0.0128 | 16 | c.64- others(33): Show |
COL4A6 | ENSG00000197565.17 | transcript | ENST00000334504.12 | protein_coding | 2/44 | chrX | TogoVar | ||||||
COL4A6_chrX_108150614_108443422 | 108348950 | A | ATCACACC others(9): Show |
intron_variant | MODIFIER | NA18979.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0186 | 1 | 234 | 0.0043 | 16 | c.64- others(33): Show |
COL4A6 | ENSG00000197565.17 | transcript | ENST00000334504.12 | protein_coding | 2/44 | chrX | TogoVar | ||||||
COL4A6_chrX_108150614_108443422 | 108377941 | C | CAAAAAAA others(9): Show |
intron_variant | MODIFIER | HG02080.hp2 | a0002 | a0002c0024 | a0002c0024t0008 | a0002c0024t0008g0035 | 1 | 234 | 0.0043 | 16 | c.63+ others(33): Show |
COL4A6 | ENSG00000197565.17 | transcript | ENST00000334504.12 | protein_coding | 2/44 | chrX | TogoVar | ||||||
COL5A1_chr9_134636803_134849843 | 134654522 | C | CAGGGCTG others(9): Show |
intron_variant | MODIFIER | HG03139.hp1 | a0001 | a0001c0003 | a0001c0003t0014 | a0001c0003t0014g0247 | 1 | 272 | 0.0037 | 16 | c.109 others(35): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 1/65 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL5A1_chr9_134636803_134849843 | 134668954 | C | CCCATCCA others(9): Show |
intron_variant | MODIFIER | HG03098.hp2 | a0001 | a0001c0036 | a0001c0036t0035 | a0001c0036t0035g0045 | 1 | 272 | 0.0037 | 16 | c.110 others(35): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 1/65 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL5A1_chr9_134636803_134849843 | 134668986 | T | TCCATCCA others(9): Show |
intron_variant | MODIFIER | HG01243.hp1 HG03471.hp1 |
a0001 | a0001c0003a0001c0005 | a0001c0003t0010a0001c0005t0045 | a0001c0003t0010g0259a0001c0005t0045g0267 | 2 | 272 | 0.0074 | 16 | c.110 others(35): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 1/65 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL5A1_chr9_134636803_134849843 | 134747961 | G | GCACACAT others(9): Show |
intron_variant | MODIFIER | HG02257.hp2 HG02572.hp1 HG02922.hp2 others(1): Show |
a0001 | a0001c0001a0001c0016 | a0001c0001t0009a0001c0016t0001a0001c0016t0012others(1): Show | a0001c0001t0009g0233a0001c0016t0001g0022a0001c0016t0012g0021others(1): Show | 4 | 272 | 0.0147 | 16 | c.149 others(35): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 11/65 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL5A1_chr9_134636803_134849843 | 134747961 | G | GCACACAT others(9): Show |
intron_variant | MODIFIER | HG01168.hp2 HG01169.hp1 HG01256.hp2 others(3): Show |
a0003 | a0003c0020a0003c0021a0003c0038others(1): Show | a0003c0020t0001a0003c0021t0001a0003c0038t0001others(1): Show | a0003c0020t0001g0120a0003c0020t0001g0121a0003c0021t0001g0157others(3): Show | 6 | 272 | 0.0221 | 16 | c.149 others(35): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 11/65 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL5A1_chr9_134636803_134849843 | 134747961 | G | GCGCACAT others(9): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(55): Show |
a0001a0002a0005others(2): Show | a0001c0001a0001c0002a0001c0003others(14): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(33): Show | a0001c0001t0001g0147a0001c0001t0002g0023a0001c0001t0002g0069others(55): Show | 58 | 272 | 0.2132 | 16 | c.149 others(35): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 11/65 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL5A1_chr9_134636803_134849843 | 134823756 | T | TGCGTGTA others(9): Show |
intron_variant | MODIFIER | HG02735.hp2 | a0001 | a0001c0004 | a0001c0004t0002 | a0001c0004t0002g0046 | 1 | 272 | 0.0037 | 16 | c.469 others(33): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 61/65 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL5A1_chr9_134636803_134849843 | 134824019 | G | GTATGTGT others(9): Show |
intron_variant | MODIFIER | HG01167.hp2 HG01169.hp2 HG02145.hp1 others(7): Show |
a0001 | a0001c0001a0001c0003a0001c0004others(4): Show | a0001c0001t0009a0001c0003t0025a0001c0004t0018others(5): Show | a0001c0001t0009g0233a0001c0003t0025g0043a0001c0003t0025g0218others(7): Show | 10 | 272 | 0.0368 | 16 | c.469 others(33): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 61/65 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL5A2_chr2_189026898_189184761 | 189059585 | G | GTTTTTTT others(9): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp2 others(22): Show |
a0001a0004a0006others(1): Show | a0001c0001a0004c0013a0006c0009others(1): Show | a0001c0001t0001a0004c0013t0001a0006c0009t0001others(1): Show | a0001c0001t0001g0004a0001c0001t0001g0011a0001c0001t0001g0015others(22): Show | 25 | 248 | 0.1008 | 16 | c.208 others(33): Show |
COL5A2 | ENSG00000204262.14 | transcript | ENST00000374866.9 | protein_coding | 31/53 | chr2 | TogoVar | ||||||
COL5A2_chr2_189026898_189184761 | 189094588 | G | GACACACA others(9): Show |
intron_variant | MODIFIER | HG00609.hp2 HG02293.hp2 HG03688.hp1 others(11): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0002others(3): Show | a0001c0001t0001g0078a0001c0001t0001g0100a0001c0001t0003g0179others(11): Show | 14 | 248 | 0.0565 | 16 | c.457 others(33): Show |
COL5A2 | ENSG00000204262.14 | transcript | ENST00000374866.9 | protein_coding | 6/53 | chr2 | TogoVar | ||||||
COL5A3_chr19_9954561_10015504 | 9970161 | G | GGGTGAGT others(9): Show |
intron_variant | MODIFIER | HG03831.hp2 | a0052 | a0052c0128 | a0052c0128t0001 | a0052c0128t0001g0277 | 1 | 412 | 0.0024 | 16 | c.393 others(33): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 54/66 | chr19 | TogoVar | ||||||
COL5A3_chr19_9954561_10015504 | 9977947 | C | CATATATA others(9): Show |
intron_variant | MODIFIER | HG02293.hp2 HG03834.hp2 |
a0001a0005 | a0001c0001a0005c0005 | a0001c0001t0001a0005c0005t0001 | a0001c0001t0001g0381a0005c0005t0001g0176 | 2 | 412 | 0.0049 | 16 | c.301 others(33): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 41/66 | chr19 | TogoVar | ||||||
COL5A3_chr19_9954561_10015504 | 9994559 | C | CATATATA others(9): Show |
intron_variant | MODIFIER | HG02523.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0309 | 1 | 412 | 0.0024 | 16 | c.158 others(33): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 16/66 | chr19 | TogoVar | ||||||
COL5A3_chr19_9954561_10015504 | 9999136 | T | TTTCCTTC others(9): Show |
intron_variant | MODIFIER | HG02109.hp1 HG02738.hp2 HG03579.hp1 |
a0002a0010a0022 | a0002c0139a0010c0119a0022c0030 | a0002c0139t0002a0010c0119t0002a0022c0030t0002 | a0002c0139t0002g0059a0010c0119t0002g0397a0022c0030t0002g0195 | 3 | 412 | 0.0073 | 16 | c.111 others(34): Show |
COL5A3 | ENSG00000080573.7 | transcript | ENST00000264828.4 | protein_coding | 8/66 | chr19 | TogoVar | ||||||
COL6A1_chr21_45976770_46010048 | 45981651 | T | TTCCCCTC others(9): Show |
upstream_gene_variant | MODIFIER | HG02258.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0120 | 1 | 128 | 0.0078 | 16 | c.-20 others(25): Show |
COL6A1 | ENSG00000142156.16 | transcript | ENST00000361866.8 | protein_coding | 118 | chr21 | TogoVar | ||||||
COL6A2_chr21_46093112_46134801 | 46116926 | T | TACACACA others(9): Show |
intron_variant | MODIFIER | HG03834.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0134 | 1 | 372 | 0.0027 | 16 | c.999 others(31): Show |
COL6A2 | ENSG00000142173.17 | transcript | ENST00000397763.6 | protein_coding | 10/27 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
COL6A2_chr21_46093112_46134801 | 46123868 | C | CAGATGGA others(9): Show |
intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00280.hp2 others(136): Show |
a0001a0002a0005others(2): Show | a0001c0001a0001c0005a0001c0006others(15): Show | a0001c0001t0001a0001c0005t0001a0001c0005t0002others(18): Show | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0007others(125): Show | 139 | 372 | 0.3737 | 16 | c.167 others(33): Show |
COL6A2 | ENSG00000142173.17 | transcript | ENST00000397763.6 | protein_coding | 21/27 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
COL6A2_chr21_46093112_46134801 | 46123871 | A | ATGGATAA others(9): Show |
intron_variant | MODIFIER | HG00140.hp2 HG00423.hp2 HG00597.hp1 others(21): Show |
a0001a0003 | a0001c0002a0003c0004a0003c0007others(2): Show | a0001c0002t0007a0001c0002t0009a0003c0004t0004others(4): Show | a0001c0002t0007g0201a0001c0002t0009g0020a0001c0002t0009g0256others(19): Show | 24 | 372 | 0.0645 | 16 | c.167 others(33): Show |
COL6A2 | ENSG00000142173.17 | transcript | ENST00000397763.6 | protein_coding | 21/27 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
COL6A2_chr21_46093112_46134801 | 46134350 | G | GGGTTGGG others(9): Show |
downstream_gene_variant | MODIFIER | HG01175.hp1 HG02040.hp2 HG03704.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002a0001c0005 | a0001c0001t0001a0001c0002t0002a0001c0005t0001 | a0001c0001t0001g0146a0001c0002t0002g0001a0001c0002t0002g0003others(3): Show | 6 | 372 | 0.0161 | 16 | c.*48 others(27): Show |
COL6A2 | ENSG00000142173.17 | transcript | ENST00000397763.6 | protein_coding | 4550 | chr21 | TogoVar | ||||||
COL6A2_chr21_46093112_46137848 | 46116926 | T | TACACACA others(9): Show |
intron_variant | MODIFIER | HG03834.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0135 | 1 | 364 | 0.0028 | 16 | c.999 others(31): Show |
COL6A2 | ENSG00000142173.17 | transcript | ENST00000300527.9 | protein_coding | 10/27 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
COL6A2_chr21_46093112_46137848 | 46123868 | C | CAGATGGA others(9): Show |
intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00280.hp2 others(131): Show |
a0001a0002a0012others(2): Show | a0001c0001a0001c0004a0001c0006others(23): Show | a0001c0001t0001a0001c0001t0006a0001c0001t0011others(27): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0005others(125): Show | 134 | 364 | 0.3681 | 16 | c.167 others(33): Show |
COL6A2 | ENSG00000142173.17 | transcript | ENST00000300527.9 | protein_coding | 21/27 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
COL6A2_chr21_46093112_46137848 | 46123871 | A | ATGGATAA others(9): Show |
intron_variant | MODIFIER | HG00140.hp2 HG00423.hp2 HG00597.hp1 others(21): Show |
a0001a0003a0004others(1): Show | a0001c0009a0001c0044a0003c0008others(5): Show | a0001c0009t0001a0001c0044t0003a0003c0008t0003others(5): Show | a0001c0009t0001g0021a0001c0009t0001g0253a0001c0009t0001g0259others(19): Show | 24 | 364 | 0.0659 | 16 | c.167 others(33): Show |
COL6A2 | ENSG00000142173.17 | transcript | ENST00000300527.9 | protein_coding | 21/27 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
COL6A2_chr21_46093112_46137848 | 46134350 | G | GGGTTGGG others(9): Show |
downstream_gene_variant | MODIFIER | HG01175.hp1 HG02040.hp2 HG03704.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0001a0001c0002t0002a0001c0004t0001 | a0001c0001t0001g0147a0001c0002t0002g0001a0001c0002t0002g0014others(3): Show | 6 | 364 | 0.0165 | 16 | c.*17 others(27): Show |
COL6A2 | ENSG00000142173.17 | transcript | ENST00000300527.9 | protein_coding | 1503 | chr21 | TogoVar | ||||||
COL6A3_chr2_237319018_237419164 | 237332070 | C | CATATATA others(9): Show |
intron_variant | MODIFIER | HG01261.hp2 HG03654.hp2 HG03927.hp1 |
a0002 | a0002c0001 | a0002c0001t0001a0002c0001t0002 | a0002c0001t0001g0258a0002c0001t0001g0290a0002c0001t0002g0295 | 3 | 322 | 0.0093 | 16 | c.932 others(35): Show |
COL6A3 | ENSG00000163359.17 | transcript | ENST00000295550.9 | protein_coding | 42/43 | chr2 | TogoVar | ||||||
COL6A3_chr2_237319018_237419164 | 237332117 | A | ATATATAT others(9): Show |
intron_variant | MODIFIER | HG02735.hp1 HG04228.hp1 NA18981.hp1 others(2): Show |
a0001a0003a0024others(2): Show | a0001c0002a0003c0005a0024c0038others(2): Show | a0001c0002t0002a0003c0005t0003a0024c0038t0002others(2): Show | a0001c0002t0002g0297a0003c0005t0003g0060a0024c0038t0002g0110others(2): Show | 5 | 322 | 0.0155 | 16 | c.932 others(35): Show |
COL6A3 | ENSG00000163359.17 | transcript | ENST00000295550.9 | protein_coding | 42/43 | chr2 | TogoVar | ||||||
COL6A3_chr2_237319018_237419164 | 237397017 | T | TGATAGAT others(9): Show |
intron_variant | MODIFIER | HG00609.hp2 HG00741.hp2 HG01169.hp2 others(9): Show |
a0001a0002a0004others(6): Show | a0001c0002a0002c0009a0002c0022others(7): Show | a0001c0002t0002a0001c0002t0004a0002c0009t0002others(9): Show | a0001c0002t0002g0286a0001c0002t0004g0008a0002c0009t0002g0223others(9): Show | 12 | 322 | 0.0373 | 16 | c.-30 others(31): Show |
COL6A3 | ENSG00000163359.17 | transcript | ENST00000295550.9 | protein_coding | 1/43 | chr2 | TogoVar | ||||||
COL6A5_chr3_130340672_130489846 | 130362248 | T | TTCTCTCT others(9): Show |
intron_variant | MODIFIER | HG00621.hp1 | a0010 | a0010c0007 | a0010c0007t0001 | a0010c0007t0001g0105 | 1 | 292 | 0.0034 | 16 | c.-28 others(35): Show |
COL6A5 | ENSG00000172752.16 | transcript | ENST00000373157.9 | protein_coding | 1/40 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
COL6A5_chr3_130340672_130489846 | 130362252 | T | TTCTCTCT others(9): Show |
intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00544.hp2 others(38): Show |
a0001a0002a0003others(16): Show | a0001c0001a0002c0002a0003c0004others(16): Show | a0001c0001t0002a0001c0001t0003a0002c0002t0001others(20): Show | a0001c0001t0002g0198a0001c0001t0003g0086a0002c0002t0001g0172others(37): Show | 41 | 292 | 0.1404 | 16 | c.-28 others(35): Show |
COL6A5 | ENSG00000172752.16 | transcript | ENST00000373157.9 | protein_coding | 1/40 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
COL6A5_chr3_130340672_130489846 | 130467790 | T | TATCTAAT others(9): Show |
intron_variant | MODIFIER | HG00733.hp1 HG01358.hp2 |
a0007a0070 | a0007c0008a0070c0070 | a0007c0008t0003a0070c0070t0003 | a0007c0008t0003g0066a0070c0070t0003g0064 | 2 | 292 | 0.0069 | 16 | c.679 others(34): Show |
COL6A5 | ENSG00000172752.16 | transcript | ENST00000373157.9 | protein_coding | 37/40 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
COL6A5_chr3_130340672_130489846 | 130472827 | G | GTATATAT others(9): Show |
intron_variant | MODIFIER | HG03471.hp1 | a0038 | a0038c0043 | a0038c0043t0001 | a0038c0043t0001g0183 | 1 | 292 | 0.0034 | 16 | c.781 others(33): Show |
COL6A5 | ENSG00000172752.16 | transcript | ENST00000373157.9 | protein_coding | 40/40 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
COL6A5_chr3_130340672_130489846 | 130472832 | C | CACATATA others(9): Show |
intron_variant | MODIFIER | HG02109.hp1 | a0059 | a0059c0073 | a0059c0073t0003 | a0059c0073t0003g0040 | 1 | 292 | 0.0034 | 16 | c.781 others(33): Show |
COL6A5 | ENSG00000172752.16 | transcript | ENST00000373157.9 | protein_coding | 40/40 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
COL6A5_chr3_130340672_130489846 | 130472832 | C | CATATATA others(9): Show |
intron_variant | MODIFIER | HG00544.hp1 HG00597.hp2 HG01106.hp2 others(34): Show |
a0001a0002a0003others(18): Show | a0001c0001a0002c0002a0002c0047others(20): Show | a0001c0001t0002a0002c0002t0001a0002c0047t0001others(21): Show | a0001c0001t0002g0189a0001c0001t0002g0222a0002c0002t0001g0121others(31): Show | 37 | 292 | 0.1267 | 16 | c.781 others(33): Show |
COL6A5 | ENSG00000172752.16 | transcript | ENST00000373157.9 | protein_coding | 40/40 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
COL6A6_chr3_130512177_130682042 | 130531054 | A | AGTCTCTC others(9): Show |
intron_variant | MODIFIER | HG01243.hp1 | a0004 | a0004c0029 | a0004c0029t0002 | a0004c0029t0002g0036 | 1 | 264 | 0.0038 | 16 | c.-32 others(35): Show |
COL6A6 | ENSG00000206384.11 | transcript | ENST00000358511.11 | protein_coding | 1/36 | chr3 | TogoVar | ||||||
COL6A6_chr3_130512177_130682042 | 130531061 | G | GTCTCTCT others(9): Show |
intron_variant | MODIFIER | NA19030.hp1 | a0035 | a0035c0058 | a0035c0058t0004 | a0035c0058t0004g0240 | 1 | 264 | 0.0038 | 16 | c.-32 others(35): Show |
COL6A6 | ENSG00000206384.11 | transcript | ENST00000358511.11 | protein_coding | 1/36 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
COL6A6_chr3_130512177_130682042 | 130636794 | C | CCTCCCCG others(9): Show |
intron_variant | MODIFIER | NA19058.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0124 | 1 | 264 | 0.0038 | 16 | c.509 others(35): Show |
COL6A6 | ENSG00000206384.11 | transcript | ENST00000358511.11 | protein_coding | 28/36 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
COL8A1_chr3_99633594_99804217 | 99633643 | G | GTGGTGTG others(9): Show |
upstream_gene_variant | MODIFIER | HG00438.hp2 HG00597.hp1 NA18952.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0161a0001c0001t0002g0160a0001c0001t0003g0192others(2): Show | 5 | 262 | 0.0191 | 16 | c.-51 others(27): Show |
COL8A1 | ENSG00000144810.16 | transcript | ENST00000652472.1 | protein_coding | 4950 | chr3 | TogoVar |