Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
AFF1_chr4_86930011_87146039	87115625	T T	TTTTTTTG others(9): Show TTTTTTTGTTTTTTTTC	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0017 a0017	a0017c0026 a0017c0026	a0017c0026t0036 a0017c0026t0036	a0017c0026t0036g0260 a0017c0026t0036g0260	1	294	0.0034	16	c.246 others(33): Show c.2466+326_2466+327insTTTTTTGTTTTTTTTC	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	12/20			chr4	TogoVar
AFF1_chr4_86930011_87146039	87115625	T T	TTTTTTTT others(9): Show TTTTTTTTTTTTTTTCC	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00558.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0168 a0001c0001t0001g0168	1	294	0.0034	16	c.246 others(33): Show c.2466+326_2466+327insTTTTTTTTTTTTTTCC	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	12/20			chr4	TogoVar
AFF1_chr4_86930011_87146039	87115625	T T	TTTTTTTT others(9): Show TTTTTTTTTTTTTTTTC	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG01243.hp2 HG01978.hp1 others(7): Show HG01168.hp1 HG01243.hp2 HG01978.hp1 HG02523.hp1 NA18961.hp2 NA18977.hp1 NA19009.hp2 NA19011.hp2 NA19060.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0012 a0001c0001t0035 a0001c0001t0001 a0001c0001t0012 a0001c0001t0035	a0001c0001t0001g0133 a0001c0001t0001g0141 a0001c0001t0001g0143 others(7): Show a0001c0001t0001g0133 a0001c0001t0001g0141 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0146 a0001c0001t0001g0161 a0001c0001t0001g0164 a0001c0001t0001g0170 a0001c0001t0012g0127 a0001c0001t0035g0264	10	294	0.0340	16	c.246 others(33): Show c.2466+326_2466+327insTTTTTTTTTTTTTTTC	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	12/20			chr4	TogoVar
AFF2_chrX_148495617_149005663	148521374	G G	GCACACAC others(9): Show GCACACACACACACACA	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0034 a0001c0002t0034	a0001c0002t0034g0077 a0001c0002t0034g0077	1	169	0.0059	16	c.47+ others(33): Show c.47+20252_47+20267dupACACACACACACACAC	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581388	G G	GTATACGT others(9): Show GTATACGTGTACACACA	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01258.hp1 HG02809.hp1 others(1): Show HG01192.hp1 HG01258.hp1 HG02809.hp1 HG03654.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0035 a0001c0001t0074 a0001c0001t0008 a0001c0001t0035 a0001c0001t0074	a0001c0001t0008g0059 a0001c0001t0008g0073 a0001c0001t0035g0078 others(1): Show a0001c0001t0008g0059 a0001c0001t0008g0073 a0001c0001t0035g0078 a0001c0001t0074g0033	4	169	0.0237	16	c.48- others(33): Show c.48-70607_48-70606insCGTGTACACACATATA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148614693	T T	TTTTCTTT others(9): Show TTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	NA18977.hp1 NA18977.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0063 a0001c0001t0003g0063	1	169	0.0059	16	c.48- others(33): Show c.48-37281_48-37266dupTTTCTTTCTTTCTTTC	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148614738	T T	TTTCTTTC others(9): Show TTTCTTTCCTTCTTTTC	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG06807.hp1 NA18960.hp1 HG01884.hp2 HG06807.hp1 NA18960.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0068 a0001c0002t0031 a0001c0003t0028 a0001c0001t0068 a0001c0002t0031 a0001c0003t0028	a0001c0001t0068g0169 a0001c0002t0031g0148 a0001c0003t0028g0005 a0001c0001t0068g0169 a0001c0002t0031g0148 a0001c0003t0028g0005	3	169	0.0178	16	c.48- others(33): Show c.48-37259_48-37258insCTTTCCTTCTTTTCTT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148614738	T T	TTTCTTTC others(9): Show TTTCTTTCTTTTCTTTC	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0019 a0001c0002t0019	a0001c0002t0019g0123 a0001c0002t0019g0123	1	169	0.0059	16	c.48- others(33): Show c.48-37259_48-37258insCTTTCTTTTCTTTCTT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148704440	A A	AGATATAT others(9): Show AGATATATTTATATATG	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02647.hp1 HG02895.hp1 others(2): Show HG01243.hp1 HG02647.hp1 HG02895.hp1 HG03041.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0011 a0001c0001t0044 a0001c0001t0046 others(2): Show a0001c0001t0011 a0001c0001t0044 a0001c0001t0046 a0001c0001t0106 a0001c0002t0094	a0001c0001t0011g0128 a0001c0001t0044g0127 a0001c0001t0046g0165 others(2): Show a0001c0001t0011g0128 a0001c0001t0044g0127 a0001c0001t0046g0165 a0001c0001t0106g0121 a0001c0002t0094g0106	5	169	0.0296	16	c.104 others(37): Show c.1041+41672_1041+41673insGATATATTTATATATG	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20			chrX	TogoVar
AFF2_chrX_148495617_149005663	148773685	G G	GGAAAGAA others(9): Show GGAAAGAAAGAAAGAAA	intron_variant intron_variant	MODIFIER	HG02071.hp1 HG02735.hp1 HG02965.hp1 others(12): Show HG02071.hp1 HG02735.hp1 HG02965.hp1 NA18747.hp1 NA18945.hp1 NA18948.hp1 NA18952.hp1 NA18965.hp1 NA18988.hp1 NA18989.hp1 NA19000.hp1 NA19007.hp1 NA19060.hp1 NA19070.hp1 homoSapiens_chm13v2.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0004c0006 a0001c0001 a0001c0002 a0004c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0033 a0001c0001t0059 a0001c0001t0069 a0001c0001t0081 a0001c0001t0085 a0001c0001t0120 a0001c0001t0123 a0001c0002t0020 a0004c0006t0012	a0001c0001t0001g0036 a0001c0001t0001g0068 a0001c0001t0001g0076 others(12): Show a0001c0001t0001g0036 a0001c0001t0001g0068 a0001c0001t0001g0076 a0001c0001t0002g0062 a0001c0001t0004g0100 a0001c0001t0005g0009 a0001c0001t0033g0083 a0001c0001t0059g0014 a0001c0001t0069g0047 a0001c0001t0081g0052 a0001c0001t0085g0167 a0001c0001t0120g0035 a0001c0001t0123g0090 a0001c0002t0020g0132 a0004c0006t0012g0011	15	169	0.0888	16	c.104 others(37): Show c.1042-36144_1042-36129dupAAGAAAGAAAGAAAGA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148773685	G G	GGAAGGAA others(9): Show GGAAGGAAAGAAAGAAA	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG06807.hp1 HG02896.hp2 HG06807.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0028 a0001c0003t0112 a0001c0003t0028 a0001c0003t0112	a0001c0003t0028g0005 a0001c0003t0112g0130 a0001c0003t0028g0005 a0001c0003t0112g0130	2	169	0.0118	16	c.104 others(37): Show c.1042-36188_1042-36187insGGAAAGAAAGAAAGAA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148839894	G G	GGTGTGTG others(9): Show GGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0111 a0001c0002t0111	a0001c0002t0111g0096 a0001c0002t0111g0096	1	169	0.0059	16	c.117 others(35): Show c.1173+2188_1173+2203dupGTGTGTGTGTGTGTGT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	5/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148975943	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG01099.hp1 HG02735.hp1 others(8): Show HG00621.hp1 HG01099.hp1 HG02735.hp1 HG03017.hp1 HG04204.hp1 NA18945.hp1 NA18959.hp1 NA18962.hp1 NA18970.hp1 NA18974.hp1 NA18990.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0008 a0001c0001 a0003c0008	a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 others(7): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 a0001c0001t0015 a0001c0001t0017 a0001c0001t0053 a0001c0001t0063 a0001c0001t0067 a0001c0001t0119 a0003c0008t0045	a0001c0001t0001g0036 a0001c0001t0001g0076 a0001c0001t0003g0042 others(8): Show a0001c0001t0001g0036 a0001c0001t0001g0076 a0001c0001t0003g0042 a0001c0001t0009g0142 a0001c0001t0015g0060 a0001c0001t0017g0040 a0001c0001t0053g0027 a0001c0001t0063g0053 a0001c0001t0067g0057 a0001c0001t0119g0061 a0003c0008t0045g0010	11	169	0.0651	16	c.340 others(35): Show c.3405-1984_3405-1969dupAAAAAAAAAAAAAAAA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	16/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148983953	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00673.hp1 HG01106.hp1 others(31): Show HG00280.hp1 HG00673.hp1 HG01106.hp1 HG01256.hp1 HG01261.hp1 HG01928.hp1 HG02071.hp1 HG02074.hp1 HG02129.hp1 HG02135.hp1 HG02886.hp2 HG02896.hp2 HG03098.hp1 HG03492.hp1 HG03688.hp1 HG03942.hp1 HG04115.hp1 HG04199.hp1 HG04204.hp1 NA18943.hp1 NA18953.hp1 NA18966.hp1 NA18977.hp1 NA18988.hp1 NA18994.hp1 NA19007.hp1 NA19009.hp1 NA19012.hp1 NA19060.hp1 NA19066.hp1 NA19070.hp1 NA19083.hp1 NA20752.hp1 NA20805.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0004c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(24): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0024 a0001c0001t0033 a0001c0001t0036 a0001c0001t0043 a0001c0001t0056 a0001c0001t0057 a0001c0001t0058 a0001c0001t0081 a0001c0001t0083 a0001c0001t0086 a0001c0001t0090 a0001c0001t0118 a0001c0001t0119 a0001c0001t0120 a0001c0002t0082 a0001c0003t0112 a0004c0006t0012	a0001c0001t0001g0019 a0001c0001t0001g0068 a0001c0001t0002g0029 others(31): Show a0001c0001t0001g0019 a0001c0001t0001g0068 a0001c0001t0002g0029 a0001c0001t0002g0054 a0001c0001t0002g0166 a0001c0001t0003g0063 a0001c0001t0003g0065 a0001c0001t0004g0043 a0001c0001t0005g0022 a0001c0001t0006g0120 a0001c0001t0006g0138 a0001c0001t0006g0144 a0001c0001t0007g0089 a0001c0001t0013g0072 a0001c0001t0014g0055 a0001c0001t0014g0058 a0001c0001t0015g0032 a0001c0001t0024g0093 a0001c0001t0033g0083 a0001c0001t0036g0139 a0001c0001t0043g0006 a0001c0001t0056g0023 a0001c0001t0057g0135 a0001c0001t0058g0097 a0001c0001t0081g0052 a0001c0001t0083g0024 a0001c0001t0086g0031 a0001c0001t0090g0099 a0001c0001t0118g0088 a0001c0001t0119g0061 a0001c0001t0120g0035 a0001c0002t0082g0016 a0001c0003t0112g0130 a0004c0006t0012g0011	34	169	0.2012	16	c.362 others(35): Show c.3623+3178_3623+3179insAAAAAAAAAAAAAAAA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	19/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148985285	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0019 a0001c0002t0019	a0001c0002t0019g0123 a0001c0002t0019g0123	1	169	0.0059	16	c.362 others(35): Show c.3624-2063_3624-2048dupTTTTTTTTTTTTTTTT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	19/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF3_chr2_99540419_100147590	99618893	G G	GATTCATT others(9): Show GATTCATTCATTCATTC	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG04228.hp2 HG01358.hp2 HG04228.hp2	a0001 a0002 a0001 a0002	a0001c0014 a0002c0002 a0001c0014 a0002c0002	a0001c0014t0004 a0002c0002t0035 a0001c0014t0004 a0002c0002t0035	a0001c0014t0004g0099 a0002c0002t0035g0087 a0001c0014t0004g0099 a0002c0002t0035g0087	2	100	0.0200	16	c.118 others(37): Show c.1185-17288_1185-17273dupGAATGAATGAATGAAT	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	13/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99648917	A A	ACACACAC others(9): Show ACACACACACACACACT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0006 a0002c0007t0006	a0002c0007t0006g0081 a0002c0007t0006g0081	1	100	0.0100	16	c.118 others(33): Show c.1184+708_1184+709insAGTGTGTGTGTGTGTG	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	13/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99648917	A A	ACACACAC others(9): Show ACACACACACACACTCT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0013 a0002c0002t0013	a0002c0002t0013g0005 a0002c0002t0013g0005	1	100	0.0100	16	c.118 others(33): Show c.1184+708_1184+709insAGAGTGTGTGTGTGTG	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	13/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99648917	A A	ACACACAC others(9): Show ACACACACTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0028 a0002c0002t0002g0028	1	100	0.0100	16	c.118 others(33): Show c.1184+708_1184+709insAGAGAGAGAGTGTGTG	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	13/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99724271	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01891.hp2 HG02055.hp2 others(10): Show HG01106.hp2 HG01891.hp2 HG02055.hp2 HG02647.hp2 HG02970.hp2 HG02976.hp1 HG03139.hp2 HG03209.hp1 HG03540.hp1 HG04115.hp1 HG04115.hp2 HG06807.hp1 HG06807.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0003 a0001c0004 others(4): Show a0001c0001 a0001c0003 a0001c0004 a0001c0009 a0002c0007 a0002c0013 a0003c0006	a0001c0001t0001 a0001c0001t0004 a0001c0001t0008 others(9): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0008 a0001c0001t0016 a0001c0001t0017 a0001c0003t0002 a0001c0003t0006 a0001c0004t0005 a0001c0009t0009 a0002c0007t0008 a0002c0013t0019 a0003c0006t0003	a0001c0001t0001g0080 a0001c0001t0004g0042 a0001c0001t0004g0050 others(10): Show a0001c0001t0001g0080 a0001c0001t0004g0042 a0001c0001t0004g0050 a0001c0001t0008g0009 a0001c0001t0016g0003 a0001c0001t0017g0010 a0001c0003t0002g0064 a0001c0003t0006g0063 a0001c0004t0005g0094 a0001c0009t0009g0017 a0002c0007t0008g0007 a0002c0013t0019g0014 a0003c0006t0003g0069	13	100	0.1300	16	c.109 others(35): Show c.1091+2790_1091+2805dupAAAAAAAAAAAAAAAA	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	11/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99969478	C C	CATTTATT others(9): Show CATTTATTTATTTATTT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01884.hp1 HG02055.hp1 others(8): Show HG00099.hp2 HG01884.hp1 HG02055.hp1 HG02895.hp1 HG02922.hp1 HG02970.hp1 HG02976.hp1 HG03041.hp1 HG03471.hp2 HG03927.hp2 HG04199.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0005 others(3): Show a0001c0001 a0001c0003 a0001c0005 a0001c0009 a0002c0002 a0002c0013	a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 others(8): Show a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0030 a0001c0003t0003 a0001c0005t0009 a0001c0009t0021 a0002c0002t0001 a0002c0002t0018 a0002c0002t0023 a0002c0013t0019	a0001c0001t0004g0082 a0001c0001t0005g0075 a0001c0001t0007g0078 others(8): Show a0001c0001t0004g0082 a0001c0001t0005g0075 a0001c0001t0007g0078 a0001c0001t0030g0077 a0001c0003t0003g0046 a0001c0005t0009g0016 a0001c0009t0021g0013 a0002c0002t0001g0059 a0002c0002t0018g0015 a0002c0002t0023g0054 a0002c0013t0019g0014	11	100	0.1100	16	c.873 others(35): Show c.873+37138_873+37153dupAAATAAATAAATAAAT	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	7/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	100129382	C C	CTGTGTGT others(9): Show CTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0035 a0002c0002t0035	a0002c0002t0035g0087 a0002c0002t0035g0087	1	100	0.0100	16	c.-22 others(31): Show c.-227-92_-227-77dupCACACACACACACACA	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	1/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	100129416	G G	GTGTGTGT others(9): Show GTGTGTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00639.hp2 HG02293.hp2 others(2): Show HG00609.hp2 HG00639.hp2 HG02293.hp2 HG02523.hp2 NA18971.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0003 a0003c0006 a0001c0001 a0001c0003 a0003c0006	a0001c0001t0003 a0001c0001t0028 a0001c0003t0001 others(1): Show a0001c0001t0003 a0001c0001t0028 a0001c0003t0001 a0003c0006t0001	a0001c0001t0003g0048 a0001c0001t0028g0061 a0001c0003t0001g0066 others(2): Show a0001c0001t0003g0048 a0001c0001t0028g0061 a0001c0003t0001g0066 a0001c0003t0001g0067 a0003c0006t0001g0068	5	100	0.0500	16	c.-22 others(33): Show c.-227-111_-227-110insTACACACACACACACA	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	1/24			chr2	TogoVar
AFMID_chr17_78182362_78212702	78187960	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG02572.hp1 HG00597.hp2 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0019 a0001c0001t0004 a0001c0001t0019	a0001c0001t0004g0292 a0001c0001t0019g0031 a0001c0001t0004g0292 a0001c0001t0019g0031	2	446	0.0045	16	c.63+ others(29): Show c.63+541_63+556dupAAAAAAAAAAAAAAAA	AFMID	ENSG00000183077.16	transcript	ENST00000409257.10	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr17	TogoVar
AFP_chr4_73431221_73461174	73459177	G G	GTGTGTGT others(9): Show GTGTGTGTGTGTATGCA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01257.hp1 HG01258.hp2 HG02148.hp2 others(2): Show HG01257.hp1 HG01258.hp2 HG02148.hp2 HG03491.hp2 HG03492.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0035 a0001c0001t0002g0002 a0001c0001t0002g0035	5	390	0.0128	16	c.35 others(27): Show c.3557_*3558insTGTGTGTGTGTATGCA	AFP	ENSG00000081051.8	transcript	ENST00000395792.7	protein_coding		3004		chr4	TogoVar
AFP_chr4_73431221_73461174	73459543	T T	TTTTATTT others(9): Show TTTTATTTATTTATTTA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp2 HG02027.hp2 HG02056.hp2 others(7): Show HG01884.hp2 HG02027.hp2 HG02056.hp2 HG02647.hp1 HG02895.hp2 HG02897.hp1 HG03098.hp2 HG03942.hp1 HG04204.hp2 NA19240.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0007 a0001c0001 a0004c0007	a0001c0001t0002 a0001c0001t0005 a0004c0007t0002 a0001c0001t0002 a0001c0001t0005 a0004c0007t0002	a0001c0001t0002g0009 a0001c0001t0002g0112 a0001c0001t0002g0117 others(2): Show a0001c0001t0002g0009 a0001c0001t0002g0112 a0001c0001t0002g0117 a0001c0001t0005g0009 a0004c0007t0002g0012	10	390	0.0256	16	c.39 others(27): Show c.3923_*3924insTTTATTTATTTATTTA	AFP	ENSG00000081051.8	transcript	ENST00000395792.7	protein_coding		3370		chr4	TogoVar
AFTPH_chr2_64519328_64598005	64554330	T T	TGTCTAAA others(9): Show TGTCTAAAACAAGACCC	intron_variant intron_variant	MODIFIER	HG03490.hp2 HG03490.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0040 a0001c0001t0005g0040	1	372	0.0027	16	c.193 others(33): Show c.1935+921_1935+922insGTCTAAAACAAGACCC	AFTPH	ENSG00000119844.17	transcript	ENST00000409933.6	protein_coding	2/9			chr2	TogoVar
AFTPH_chr2_64519328_64598005	64555989	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02630.hp1 HG03209.hp2 others(2): Show HG02559.hp1 HG02630.hp1 HG03209.hp2 HG03540.hp1 NA18986.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0003 a0002c0002t0002 a0002c0002t0003	a0002c0002t0002g0112 a0002c0002t0002g0310 a0002c0002t0002g0311 others(2): Show a0002c0002t0002g0112 a0002c0002t0002g0310 a0002c0002t0002g0311 a0002c0002t0002g0344 a0002c0002t0003g0322	5	372	0.0134	16	c.193 others(35): Show c.1935+2595_1935+2596insTTTTTTTTTTTTTTTT	AFTPH	ENSG00000119844.17	transcript	ENST00000409933.6	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235536254	T T	TACACACA others(9): Show TACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01123.hp2 HG01168.hp2 others(10): Show HG00642.hp2 HG01123.hp2 HG01168.hp2 HG02109.hp2 HG02615.hp1 HG02615.hp2 HG02723.hp1 HG02818.hp1 HG02896.hp2 NA19011.hp1 NA19011.hp2 NA20300.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0006 others(2): Show a0001c0001 a0001c0002 a0001c0006 a0001c0009 a0002c0004	a0001c0001t0002 a0001c0001t0011 a0001c0001t0012 others(9): Show a0001c0001t0002 a0001c0001t0011 a0001c0001t0012 a0001c0001t0044 a0001c0002t0001 a0001c0002t0013 a0001c0002t0014 a0001c0002t0039 a0001c0006t0001 a0001c0006t0033 a0001c0009t0017 a0002c0004t0001	a0001c0001t0002g0070 a0001c0001t0011g0020 a0001c0001t0012g0071 others(10): Show a0001c0001t0002g0070 a0001c0001t0011g0020 a0001c0001t0012g0071 a0001c0001t0044g0041 a0001c0002t0001g0018 a0001c0002t0013g0035 a0001c0002t0014g0076 a0001c0002t0039g0059 a0001c0006t0001g0016 a0001c0006t0033g0087 a0001c0009t0017g0037 a0002c0004t0001g0017 a0002c0004t0001g0025	13	98	0.1327	16	c.163 others(35): Show c.163+41413_163+41428dupCACACACACACACACA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235536406	T T	TACACACA others(9): Show TACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG02723.hp1 HG00741.hp1 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0002 a0001c0006t0046 a0001c0001t0002 a0001c0006t0046	a0001c0001t0002g0070 a0001c0006t0046g0040 a0001c0001t0002g0070 a0001c0006t0046g0040	2	98	0.0204	16	c.163 others(35): Show c.163+41573_163+41588dupCACACACACACACACA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235538427	A A	ATGTGTGT others(9): Show ATGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01106.hp2 HG02145.hp1 others(5): Show HG00438.hp1 HG01106.hp2 HG02145.hp1 HG03540.hp1 NA18522.hp2 NA19030.hp1 NA19240.hp2 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0008 others(1): Show a0001c0001 a0001c0002 a0001c0008 a0002c0004	a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 others(5): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0024 a0001c0001t0027 a0001c0002t0004 a0001c0008t0028 a0002c0004t0045	a0001c0001t0002g0047 a0001c0001t0003g0036 a0001c0001t0008g0069 others(5): Show a0001c0001t0002g0047 a0001c0001t0003g0036 a0001c0001t0008g0069 a0001c0001t0024g0077 a0001c0001t0027g0062 a0001c0002t0004g0072 a0001c0008t0028g0029 a0002c0004t0045g0039	8	98	0.0816	16	c.163 others(35): Show c.163+43597_163+43612dupTGTGTGTGTGTGTGTG	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235571932	T T	TTGTGTGT others(9): Show TTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG02809.hp2 NA19030.hp2 HG00741.hp2 HG02809.hp2 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0005 a0002c0004 a0001c0002 a0001c0005 a0002c0004	a0001c0002t0032 a0001c0005t0040 a0002c0004t0001 a0001c0002t0032 a0001c0005t0040 a0002c0004t0001	a0001c0002t0032g0051 a0001c0005t0040g0006 a0002c0004t0001g0043 a0001c0002t0032g0051 a0001c0005t0040g0006 a0002c0004t0001g0043	3	98	0.0306	16	c.163 others(35): Show c.163+77095_163+77110dupGTGTGTGTGTGTGTGT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235590680	T T	TGTGTGTG others(9): Show TGTGTGTGTGCGTGTGC	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0024	a0001c0001t0024g0077 a0001c0001t0024g0077	1	98	0.0102	16	c.163 others(35): Show c.163+95836_163+95837insTGTGCGTGTGCGTGTG	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235590692	C C	CGTGTGCG others(9): Show CGTGTGCGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0015 a0001c0009t0015	a0001c0009t0015g0038 a0001c0009t0015g0038	1	98	0.0102	16	c.163 others(35): Show c.163+95848_163+95849insCGTGTGTGTGTGTGTG	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235636115	G G	GTAAATAA others(9): Show GTAAATAAATAAATAAA	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG03471.hp1 HG02896.hp2 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0048 a0001c0002t0039 a0001c0001t0048 a0001c0002t0039	a0001c0001t0048g0054 a0001c0002t0039g0059 a0001c0001t0048g0054 a0001c0002t0039g0059	2	98	0.0204	16	c.164 others(35): Show c.164-73039_164-73024dupTAAATAAATAAATAAA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235682797	C C	CGTGTGTG others(9): Show CGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG03098.hp2 NA21309.hp1 HG03098.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0018 a0001c0001 a0001c0018	a0001c0001t0024 a0001c0018t0049 a0001c0001t0024 a0001c0018t0049	a0001c0001t0024g0077 a0001c0018t0049g0080 a0001c0001t0024g0077 a0001c0018t0049g0080	2	98	0.0204	16	c.164 others(35): Show c.164-26375_164-26360dupGTGTGTGTGTGTGTGT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235686588	C C	CACACACA others(9): Show CACACACACACACATAT	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0017 a0001c0009t0017	a0001c0009t0017g0037 a0001c0009t0017g0037	1	98	0.0102	16	c.164 others(35): Show c.164-22591_164-22590insACACACACACACATAT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17			chr2	TogoVar
AGAP1_chr2_235489043_236136793	235702934	G G	GTTTTTTT others(9): Show GTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01123.hp2 HG01928.hp2 HG01106.hp1 HG01123.hp2 HG01928.hp2	a0001 a0001	a0001c0002 a0001c0006 a0001c0002 a0001c0006	a0001c0002t0006 a0001c0006t0033 a0001c0006t0035 a0001c0002t0006 a0001c0006t0033 a0001c0006t0035	a0001c0002t0006g0093 a0001c0006t0033g0087 a0001c0006t0035g0044 a0001c0002t0006g0093 a0001c0006t0033g0087 a0001c0006t0035g0044	3	98	0.0306	16	c.164 others(33): Show c.164-6233_164-6232insTTTTTTTTTTTTTTTT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235862141	G G	GTTCATCC others(9): Show GTTCATCCATGGCTCCA	intron_variant intron_variant	MODIFIER	HG02622.hp1 NA18906.hp1 HG02622.hp1 NA18906.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0013 a0001c0001 a0002c0013	a0001c0001t0010 a0002c0013t0041 a0001c0001t0010 a0002c0013t0041	a0001c0001t0010g0014 a0002c0013t0041g0081 a0001c0001t0010g0014 a0002c0013t0041g0081	2	98	0.0204	16	c.105 others(37): Show c.1051-21188_1051-21173dupATTCATCCATGGCTCC	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	9/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235867536	A A	AGTGTGTG others(9): Show AGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0012 a0001c0001t0005g0012	1	98	0.0102	16	c.105 others(37): Show c.1051-15785_1051-15770dupTGTGTGTGTGTGTGTG	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	9/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235867572	T T	TGTGTGTG others(9): Show TGTGTGTGTGTGTGTGC	intron_variant intron_variant	MODIFIER	HG01123.hp2 NA19011.hp2 HG01123.hp2 NA19011.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0033 a0001c0006t0001 a0001c0006t0033	a0001c0006t0001g0016 a0001c0006t0033g0087 a0001c0006t0001g0016 a0001c0006t0033g0087	2	98	0.0204	16	c.105 others(37): Show c.1051-15770_1051-15769insTGTGTGTGTGTGCGTG	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	9/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235894633	G G	GCACATGT others(9): Show GCACATGTACACACACA	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp2 HG00642.hp1 others(46): Show HG00438.hp1 HG00438.hp2 HG00642.hp1 HG00741.hp1 HG01106.hp1 HG01123.hp2 HG01168.hp1 HG01192.hp1 HG01192.hp2 HG01358.hp2 HG01496.hp1 HG01928.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02622.hp2 HG02630.hp1 HG02647.hp2 HG02717.hp1 HG02723.hp1 HG02818.hp2 HG02896.hp1 HG02922.hp1 HG02976.hp2 HG03041.hp1 HG03139.hp1 HG03195.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03831.hp2 HG04199.hp2 NA18522.hp1 NA18906.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp1 NA20300.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0003 others(11): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0008 a0001c0014 a0001c0017 a0001c0019 a0001c0021 a0002c0004 a0002c0007 a0002c0020 a0003c0015	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(39): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0026 a0001c0001t0027 a0001c0001t0048 a0001c0002t0001 a0001c0002t0004 a0001c0002t0006 a0001c0002t0013 a0001c0002t0034 a0001c0002t0043 a0001c0003t0002 a0001c0003t0003 a0001c0003t0020 a0001c0003t0025 a0001c0005t0004 a0001c0005t0040 a0001c0006t0001 a0001c0006t0006 a0001c0006t0033 a0001c0006t0035 a0001c0006t0037 a0001c0006t0046 a0001c0008t0001 a0001c0008t0028 a0001c0014t0016 a0001c0017t0008 a0001c0019t0007 a0001c0021t0002 a0002c0004t0001 a0002c0004t0006 a0002c0004t0029 a0002c0007t0005 a0002c0007t0008 a0002c0007t0018 a0002c0007t0023 a0002c0020t0001 a0003c0015t0002	a0001c0001t0002g0002 a0001c0001t0002g0046 a0001c0001t0002g0049 others(46): Show a0001c0001t0002g0002 a0001c0001t0002g0046 a0001c0001t0002g0049 a0001c0001t0002g0070 a0001c0001t0003g0063 a0001c0001t0005g0012 a0001c0001t0007g0008 a0001c0001t0008g0069 a0001c0001t0010g0003 a0001c0001t0026g0095 a0001c0001t0027g0062 a0001c0001t0048g0054 a0001c0002t0001g0004 a0001c0002t0001g0010 a0001c0002t0001g0018 a0001c0002t0001g0027 a0001c0002t0001g0073 a0001c0002t0004g0079 a0001c0002t0006g0093 a0001c0002t0013g0035 a0001c0002t0034g0084 a0001c0002t0043g0064 a0001c0003t0002g0005 a0001c0003t0003g0001 a0001c0003t0020g0053 a0001c0003t0025g0015 a0001c0005t0004g0088 a0001c0005t0040g0006 a0001c0006t0001g0016 a0001c0006t0006g0019 a0001c0006t0033g0087 a0001c0006t0035g0044 a0001c0006t0037g0021 a0001c0006t0046g0040 a0001c0008t0001g0061 a0001c0008t0028g0029 a0001c0014t0016g0048 a0001c0017t0008g0092 a0001c0019t0007g0056 a0001c0021t0002g0091 a0002c0004t0001g0082 a0002c0004t0006g0042 a0002c0004t0029g0083 a0002c0007t0005g0094 a0002c0007t0008g0011 a0002c0007t0018g0028 a0002c0007t0023g0085 a0002c0020t0001g0022 a0003c0015t0002g0075	49	98	0.5000	16	c.115 others(37): Show c.1155+11184_1155+11185insCACATGTACACACACA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	10/17			chr2	TogoVar
AGAP1_chr2_235489043_236136793	236025901	C C	CGGGTGGG others(9): Show CGGGTGGGTGGGTGGGT	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG02572.hp1 HG02717.hp2 others(10): Show HG01358.hp2 HG02572.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02896.hp2 HG03041.hp1 HG03041.hp2 HG03486.hp2 HG03516.hp1 NA21309.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(7): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0019 a0001c0001t0024 a0001c0001t0044 a0001c0002t0039 a0001c0003t0047 a0001c0005t0004 a0001c0005t0031	a0001c0001t0002g0002 a0001c0001t0002g0046 a0001c0001t0002g0070 others(10): Show a0001c0001t0002g0002 a0001c0001t0002g0046 a0001c0001t0002g0070 a0001c0001t0003g0034 a0001c0001t0003g0090 a0001c0001t0005g0007 a0001c0001t0019g0065 a0001c0001t0024g0077 a0001c0001t0044g0041 a0001c0002t0039g0059 a0001c0003t0047g0033 a0001c0005t0004g0097 a0001c0005t0031g0031	13	98	0.1327	16	c.164 others(37): Show c.1646-10650_1646-10649insGTGGGTGGGTGGGTGG	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	13/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	236025908	G G	GTGGGTGG others(9): Show GTGGGTGGGTGGGTGGA	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0001 a0001c0003t0003g0001	1	98	0.0102	16	c.164 others(37): Show c.1646-10650_1646-10649insGTGGGTGGGTGGATGG	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	13/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	236093768	T T	TATTGAAA others(9): Show TATTGAAATCTTGAAAA	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01496.hp1 HG01884.hp2 others(29): Show HG00642.hp1 HG01496.hp1 HG01884.hp2 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02280.hp1 HG02572.hp2 HG02615.hp1 HG02630.hp1 HG02647.hp2 HG02809.hp1 HG02818.hp2 HG02922.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03139.hp2 HG03453.hp2 HG03486.hp2 HG03579.hp1 HG03579.hp2 NA18906.hp1 NA18906.hp2 NA19030.hp1 NA19030.hp2 NA19240.hp1 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(7): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0008 a0001c0012 a0001c0014 a0001c0016 a0002c0004 a0002c0007	a0001c0001t0002 a0001c0001t0003 a0001c0001t0009 others(23): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0019 a0001c0001t0026 a0001c0002t0001 a0001c0002t0004 a0001c0002t0013 a0001c0002t0014 a0001c0002t0034 a0001c0003t0003 a0001c0003t0009 a0001c0003t0012 a0001c0003t0020 a0001c0003t0047 a0001c0005t0004 a0001c0005t0031 a0001c0005t0040 a0001c0008t0028 a0001c0012t0009 a0001c0014t0016 a0001c0016t0007 a0002c0004t0001 a0002c0007t0018	a0001c0001t0002g0046 a0001c0001t0002g0060 a0001c0001t0003g0036 others(29): Show a0001c0001t0002g0046 a0001c0001t0002g0060 a0001c0001t0003g0036 a0001c0001t0003g0063 a0001c0001t0009g0074 a0001c0001t0010g0003 a0001c0001t0010g0014 a0001c0001t0011g0020 a0001c0001t0011g0098 a0001c0001t0019g0065 a0001c0001t0026g0095 a0001c0002t0001g0004 a0001c0002t0001g0027 a0001c0002t0004g0079 a0001c0002t0013g0035 a0001c0002t0014g0052 a0001c0002t0014g0076 a0001c0002t0034g0084 a0001c0003t0003g0001 a0001c0003t0009g0096 a0001c0003t0012g0066 a0001c0003t0020g0053 a0001c0003t0047g0033 a0001c0005t0004g0088 a0001c0005t0031g0031 a0001c0005t0040g0006 a0001c0008t0028g0029 a0001c0012t0009g0078 a0001c0014t0016g0048 a0001c0016t0007g0089 a0002c0004t0001g0082 a0002c0007t0018g0028	32	98	0.3265	16	c.211 others(37): Show c.2115-26414_2115-26413insTGAAAAATTGAAATCT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	16/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP3_chr7_151081475_151149434	151105792	C C	CCACACAC others(9): Show CCACACACACACACACA	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG01258.hp1 HG02572.hp1 others(1): Show HG01257.hp1 HG01258.hp1 HG02572.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0005t0006 a0001c0001t0001 a0001c0005t0006	a0001c0001t0001g0004 a0001c0001t0001g0107 a0001c0005t0006g0338 a0001c0001t0001g0004 a0001c0001t0001g0107 a0001c0005t0006g0338	4	354	0.0113	16	c.332 others(35): Show c.332-10976_332-10961dupCACACACACACACACA	AGAP3	ENSG00000133612.20	transcript	ENST00000397238.7	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGAP3_chr7_151081475_151149434	151112396	C C	CGTGTGTG others(9): Show CGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	NA18964.hp2 NA18964.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0063 a0001c0001t0001g0063	1	354	0.0028	16	c.332 others(33): Show c.332-4372_332-4357dupGTGTGTGTGTGTGTGT	AGAP3	ENSG00000133612.20	transcript	ENST00000397238.7	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGAP4_chr10_45820594_45852500	45852217	T T	TAAAAAAA others(9): Show TAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03516.hp1 HG06807.hp1 NA21309.hp1 HG03516.hp1 HG06807.hp1 NA21309.hp1	a0006 a0018 a0006 a0018	a0006c0007 a0018c0024 a0006c0007 a0018c0024	a0006c0007t0001 a0018c0024t0001 a0006c0007t0001 a0018c0024t0001	a0006c0007t0001g0065 a0006c0007t0001g0070 a0018c0024t0001g0016 a0006c0007t0001g0065 a0006c0007t0001g0070 a0018c0024t0001g0016	3	382	0.0079	16	c.-48 others(27): Show c.-4886_-4871dupTTTTTTTTTTTTTTTT	AGAP4	ENSG00000188234.15	transcript	ENST00000616763.6	protein_coding		4718		chr10	TogoVar
AGAP5_chr10_73669295_73703109	73669760	A A	AAAAAAAA others(9): Show AAAAAAAAAAAAAAAAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0177 a0002c0002t0001g0177	1	368	0.0027	16	c.48 others(27): Show c.4838_*4839insGTTTTTTTTTTTTTTT	AGAP5	ENSG00000172650.15	transcript	ENST00000374094.9	protein_coding		4534		chr10	TogoVar
AGAP6_chr10_49983406_50015499	50007392	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG03486.hp2 HG03942.hp1 HG02258.hp1 HG03486.hp2 HG03942.hp1	a0003 a0014 a0015 a0003 a0014 a0015	a0003c0003 a0014c0033 a0015c0034 a0003c0003 a0014c0033 a0015c0034	a0003c0003t0003 a0014c0033t0004 a0015c0034t0004 a0003c0003t0003 a0014c0033t0004 a0015c0034t0004	a0003c0003t0003g0231 a0014c0033t0004g0056 a0015c0034t0004g0055 a0003c0003t0003g0231 a0014c0033t0004g0056 a0015c0034t0004g0055	3	406	0.0074	16	c.534 others(31): Show c.534-622_534-607dupAAAAAAAAAAAAAAAA	AGAP6	ENSG00000204149.16	transcript	ENST00000412531.7	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr10	TogoVar

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