Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ATAD1_chr10_87746512_87823226	87811334	A A	AAAATAAA others(9): Show AAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00323.hp2 HG00609.hp1 others(56): Show HG00280.hp2 HG00323.hp2 HG00609.hp1 HG00735.hp2 HG01074.hp1 HG01081.hp1 HG01106.hp1 HG01106.hp2 HG01243.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01358.hp1 HG01433.hp1 HG01496.hp2 HG01516.hp2 HG01517.hp2 HG01952.hp1 HG02083.hp1 HG02293.hp1 HG02572.hp1 HG02647.hp2 HG02723.hp2 HG02809.hp2 HG02818.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp2 HG03017.hp1 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03540.hp1 HG04184.hp2 HG04199.hp2 NA18522.hp1 NA18941.hp2 NA18943.hp2 NA18966.hp2 NA18967.hp2 NA18972.hp2 NA18984.hp2 NA18988.hp1 NA18990.hp1 NA18993.hp1 NA18994.hp2 NA19012.hp2 NA19030.hp1 NA19054.hp2 NA19058.hp2 NA19066.hp2 NA19068.hp1 NA19077.hp1 NA19078.hp1 NA19079.hp2 NA19080.hp1 NA19083.hp2 NA19090.hp1 NA20752.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0002 a0001c0001t0003 a0001c0001t0019 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0019 a0003c0003t0002	a0001c0001t0002g0038 a0001c0001t0002g0115 a0001c0001t0002g0117 others(56): Show a0001c0001t0002g0038 a0001c0001t0002g0115 a0001c0001t0002g0117 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0121 a0001c0001t0002g0122 a0001c0001t0002g0123 a0001c0001t0002g0124 a0001c0001t0002g0125 a0001c0001t0002g0126 a0001c0001t0003g0031 a0001c0001t0003g0039 a0001c0001t0003g0042 a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0003g0070 a0001c0001t0003g0071 a0001c0001t0003g0072 a0001c0001t0003g0073 a0001c0001t0003g0074 a0001c0001t0003g0075 a0001c0001t0003g0076 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0088 a0001c0001t0003g0090 a0001c0001t0003g0091 a0001c0001t0003g0092 a0001c0001t0003g0093 a0001c0001t0003g0094 a0001c0001t0003g0095 a0001c0001t0003g0096 a0001c0001t0003g0097 a0001c0001t0003g0098 a0001c0001t0003g0099 a0001c0001t0003g0100 a0001c0001t0003g0101 a0001c0001t0003g0102 a0001c0001t0003g0103 a0001c0001t0003g0104 a0001c0001t0003g0128 a0001c0001t0003g0129 a0001c0001t0003g0130 a0001c0001t0003g0131 a0001c0001t0003g0320 a0001c0001t0003g0321 a0001c0001t0019g0089 a0003c0003t0002g0116	59	360	0.1639	16	c.162 others(33): Show c.162+3088_162+3103dupATTTATTTATTTATTT	ATAD1	ENSG00000138138.14	transcript	ENST00000680024.1	protein_coding	2/9			chr10	TogoVar
ATAD2B_chr2_23743664_23932123	23745368	A A	AGAAGGAA others(9): Show AGAAGGAAGGAAGGAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp2 HG01071.hp2 HG01243.hp2 others(31): Show HG01070.hp2 HG01071.hp2 HG01243.hp2 HG01261.hp1 HG01358.hp2 HG01934.hp1 HG02040.hp2 HG02155.hp1 HG02155.hp2 HG02258.hp1 HG02258.hp2 HG02572.hp1 HG02717.hp1 HG02723.hp1 HG03209.hp1 HG03486.hp2 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03834.hp2 HG03927.hp2 HG06807.hp1 NA18943.hp2 NA18974.hp2 NA18993.hp1 NA18995.hp2 NA19001.hp2 NA19003.hp1 NA19006.hp1 NA19074.hp1 NA19074.hp2 NA20300.hp2 NA20805.hp1 homoSapiens_chm13v2.hp1	a0001 a0006 a0010 a0001 a0006 a0010	a0001c0001 a0006c0011 a0010c0009 a0001c0001 a0006c0011 a0010c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0010 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0010 a0001c0001t0015 a0006c0011t0001 a0010c0009t0002	a0001c0001t0001g0147 a0001c0001t0001g0149 a0001c0001t0001g0153 others(31): Show a0001c0001t0001g0147 a0001c0001t0001g0149 a0001c0001t0001g0153 a0001c0001t0001g0165 a0001c0001t0001g0169 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0193 a0001c0001t0001g0201 a0001c0001t0001g0206 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0214 a0001c0001t0001g0219 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0012 a0001c0001t0002g0018 a0001c0001t0002g0020 a0001c0001t0002g0028 a0001c0001t0002g0039 a0001c0001t0002g0047 a0001c0001t0002g0051 a0001c0001t0002g0054 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0010g0053 a0001c0001t0015g0246 a0006c0011t0001g0189 a0010c0009t0002g0004	34	246	0.1382	16	c.66 others(27): Show c.6677_*6678insCTTCCTTCCTTCCTTC	ATAD2B	ENSG00000119778.15	transcript	ENST00000238789.10	protein_coding		3295		chr2	TogoVar
ATAD2B_chr2_23743664_23932123	23745417	G G	GAAGGAAG others(9): Show GAAGGAAGGAAGGAAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0113 a0001c0001t0004g0113	1	246	0.0041	16	c.66 others(27): Show c.6628_*6629insTCTTCCTTCCTTCCTT	ATAD2B	ENSG00000119778.15	transcript	ENST00000238789.10	protein_coding		3246		chr2	TogoVar
ATAD2B_chr2_23743664_23932123	23781333	A A	AAAATAAA others(9): Show AAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0122 a0001c0001t0013g0122	1	246	0.0041	16	c.313 others(35): Show c.3133+1520_3133+1535dupATTTATTTATTTATTT	ATAD2B	ENSG00000119778.15	transcript	ENST00000238789.10	protein_coding	22/27			chr2	TogoVar
ATAD2B_chr2_23743664_23932123	23878010	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01517.hp2 HG01517.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0021 a0001c0001t0002g0021	1	246	0.0041	16	c.902 others(33): Show c.902-2107_902-2106insTTTTTTTTTTTTTTTT	ATAD2B	ENSG00000119778.15	transcript	ENST00000238789.10	protein_coding	7/27			chr2	TogoVar
ATAD2B_chr2_23743664_23932123	23878025	A A	AAAAAAAA others(9): Show AAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG01257.hp1 HG02027.hp1 others(2): Show HG00544.hp1 HG01257.hp1 HG02027.hp1 NA18986.hp1 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0029 a0001c0001t0002g0034 a0001c0001t0002g0042 others(2): Show a0001c0001t0002g0029 a0001c0001t0002g0034 a0001c0001t0002g0042 a0001c0001t0002g0046 a0001c0001t0002g0061	5	246	0.0203	16	c.902 others(33): Show c.902-2122_902-2121insCTTTTTTTTTTTTTTT	ATAD2B	ENSG00000119778.15	transcript	ENST00000238789.10	protein_coding	7/27			chr2	TogoVar
ATAD2B_chr2_23743664_23932123	23903237	A A	AAAATAAA others(9): Show AAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01074.hp2 HG01257.hp2 others(7): Show HG00741.hp2 HG01074.hp2 HG01257.hp2 HG01433.hp2 HG02129.hp2 HG02818.hp1 HG03139.hp2 NA18949.hp2 NA18980.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0002t0003 a0001c0001t0004 a0001c0002t0003	a0001c0001t0004g0111 a0001c0001t0004g0112 a0001c0001t0004g0113 others(7): Show a0001c0001t0004g0111 a0001c0001t0004g0112 a0001c0001t0004g0113 a0001c0001t0004g0121 a0001c0002t0003g0228 a0001c0002t0003g0231 a0001c0002t0003g0232 a0001c0002t0003g0234 a0001c0002t0003g0237 a0001c0002t0003g0240	10	246	0.0407	16	c.217 others(33): Show c.217-7283_217-7268dupATTTATTTATTTATTT	ATAD2B	ENSG00000119778.15	transcript	ENST00000238789.10	protein_coding	1/27			chr2	TogoVar
ATAD2B_chr2_23743664_23932123	23922701	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0107 a0001c0001t0003g0107	1	246	0.0041	16	c.216 others(33): Show c.216+3853_216+3854insTTTTTTTTTTTTTTTT	ATAD2B	ENSG00000119778.15	transcript	ENST00000238789.10	protein_coding	1/27			chr2	TogoVar
ATAD2_chr8_123314850_123401447	123354864	A A	AAAAAAAA others(9): Show AAAAAAAAAAAATATAT	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01099.hp1	a0001 a0001	a0001c0016 a0001c0016	a0001c0016t0001 a0001c0016t0001	a0001c0016t0001g0132 a0001c0016t0001g0132	1	278	0.0036	16	c.164 others(35): Show c.1646+1524_1646+1525insATATATTTTTTTTTTT	ATAD2	ENSG00000156802.13	transcript	ENST00000287394.10	protein_coding	13/27			chr8	TogoVar
ATAD2_chr8_123314850_123401447	123377091	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02132.hp2 HG02451.hp1 others(5): Show HG01884.hp2 HG02132.hp2 HG02451.hp1 HG02615.hp2 HG03139.hp1 NA19000.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0012 a0002c0004 a0001c0001 a0001c0012 a0002c0004	a0001c0001t0002 a0001c0012t0002 a0002c0004t0003 a0001c0001t0002 a0001c0012t0002 a0002c0004t0003	a0001c0001t0002g0054 a0001c0001t0002g0057 a0001c0001t0002g0069 others(5): Show a0001c0001t0002g0054 a0001c0001t0002g0057 a0001c0001t0002g0069 a0001c0001t0002g0102 a0001c0001t0002g0105 a0001c0001t0002g0146 a0001c0012t0002g0019 a0002c0004t0003g0008	8	278	0.0288	16	c.320 others(33): Show c.320+3422_320+3437dupTTTTTTTTTTTTTTTT	ATAD2	ENSG00000156802.13	transcript	ENST00000287394.10	protein_coding	2/27			chr8	TogoVar
ATAD2_chr8_123314850_123401447	123378701	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0005 a0005	a0005c0010 a0005c0010	a0005c0010t0001 a0005c0010t0001	a0005c0010t0001g0135 a0005c0010t0001g0135	1	278	0.0036	16	c.320 others(33): Show c.320+1812_320+1827dupTTTTTTTTTTTTTTTT	ATAD2	ENSG00000156802.13	transcript	ENST00000287394.10	protein_coding	2/27			chr8	TogoVar
ATAD2_chr8_123314850_123401447	123389960	T T	TTATATAT others(9): Show TTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00738.hp1 HG02965.hp1 HG00733.hp1 HG00738.hp1 HG02965.hp1	a0001 a0011 a0001 a0011	a0001c0001 a0011c0019 a0001c0001 a0011c0019	a0001c0001t0002 a0011c0019t0002 a0001c0001t0002 a0011c0019t0002	a0001c0001t0002g0079 a0001c0001t0002g0080 a0011c0019t0002g0139 a0001c0001t0002g0079 a0001c0001t0002g0080 a0011c0019t0002g0139	3	278	0.0108	16	c.171 others(33): Show c.171+6211_171+6226dupTATATATATATATATA	ATAD2	ENSG00000156802.13	transcript	ENST00000287394.10	protein_coding	1/27			chr8	TogoVar
ATAD3C_chr1_1444689_1475163	1469099	T T	TAAAAAAA others(9): Show TAAAAAAAAAAAAAAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18980.hp1 NA21309.hp2 NA18980.hp1 NA21309.hp2	a0001 a0001	a0001c0004 a0001c0022 a0001c0004 a0001c0022	a0001c0004t0184 a0001c0022t0137 a0001c0004t0184 a0001c0022t0137	a0001c0004t0184g0152 a0001c0022t0137g0328 a0001c0004t0184g0152 a0001c0022t0137g0328	2	410	0.0049	16	c.59 others(25): Show c.591_*606dupAAAAAAAAAAAAAAAA	ATAD3C	ENSG00000215915.10	transcript	ENST00000378785.7	protein_coding	12/12	607	INFO_REALIGN_3_PRIME	chr1	TogoVar
ATAD5_chr17_30826966_30900869	30850869	A A	ATATATAT others(9): Show ATATATATATATATTTT	intron_variant intron_variant	MODIFIER	NA18989.hp1 NA18989.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0189 a0001c0001t0003g0189	1	286	0.0035	16	c.245 others(35): Show c.2451-4273_2451-4272insATATATATATATTTTT	ATAD5	ENSG00000176208.9	transcript	ENST00000321990.5	protein_coding	6/22		INFO_REALIGN_3_PRIME	chr17	TogoVar
ATAD5_chr17_30826966_30900869	30874607	C C	CTATTTAT others(9): Show CTATTTATTTATTTATT	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG02818.hp2 HG02886.hp2 others(1): Show HG00544.hp2 HG02818.hp2 HG02886.hp2 HG03225.hp1	a0002 a0003 a0002 a0003	a0002c0002 a0003c0003 a0002c0002 a0003c0003	a0002c0002t0002 a0003c0003t0004 a0002c0002t0002 a0003c0003t0004	a0002c0002t0002g0003 a0002c0002t0002g0060 a0003c0003t0004g0094 others(1): Show a0002c0002t0002g0003 a0002c0002t0002g0060 a0003c0003t0004g0094 a0003c0003t0004g0100	4	286	0.0140	16	c.360 others(35): Show c.3608-1741_3608-1726dupATTTATTTATTTATTT	ATAD5	ENSG00000176208.9	transcript	ENST00000321990.5	protein_coding	14/22		INFO_REALIGN_3_PRIME	chr17	TogoVar
ATCAY_chr19_3875685_3933082	3884286	C C	CTAAATAA others(9): Show CTAAATAAATAAATAAA	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02897.hp2 HG02922.hp2 others(1): Show HG02886.hp1 HG02897.hp2 HG02922.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0010 a0001c0001t0002 a0001c0001t0010	a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0024 others(1): Show a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0024 a0001c0001t0010g0023	4	384	0.0104	16	c.-41 others(33): Show c.-41-1432_-41-1417dupTAAATAAATAAATAAA	ATCAY	ENSG00000167654.18	transcript	ENST00000450849.7	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr19	TogoVar
ATCAY_chr19_3875685_3933082	3904852	C C	CTTTATTT others(9): Show CTTTATTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0251 a0001c0001t0002g0251	1	384	0.0026	16	c.137 others(31): Show c.137-574_137-559dupATTTATTTATTTATTT	ATCAY	ENSG00000167654.18	transcript	ENST00000450849.7	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr19	TogoVar
ATCAY_chr19_3875685_3933082	3914235	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01099.hp2 HG01516.hp1 others(7): Show HG01074.hp2 HG01099.hp2 HG01516.hp1 HG01516.hp2 HG01891.hp1 HG02572.hp2 HG02970.hp2 HG02976.hp2 HG03098.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0022 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0022 a0001c0001t0023 a0001c0006t0001	a0001c0001t0001g0095 a0001c0001t0001g0115 a0001c0001t0001g0201 others(7): Show a0001c0001t0001g0095 a0001c0001t0001g0115 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0307 a0001c0001t0001g0352 a0001c0001t0002g0206 a0001c0001t0022g0234 a0001c0001t0023g0339 a0001c0006t0001g0263	10	384	0.0260	16	c.965 others(31): Show c.965+394_965+395insAAAAAAAAAAAAAAAA	ATCAY	ENSG00000167654.18	transcript	ENST00000450849.7	protein_coding	9/12		INFO_REALIGN_3_PRIME	chr19	TogoVar
ATCAY_chr19_3875685_3933082	3923836	G G	GTGGATGG others(9): Show GTGGATGGATGGATGGA	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02486.hp2 HG02145.hp1 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0099 a0001c0001t0018g0122 a0001c0001t0018g0099 a0001c0001t0018g0122	2	384	0.0052	16	c.110 others(33): Show c.1107-737_1107-722dupGGATGGATGGATGGAT	ATCAY	ENSG00000167654.18	transcript	ENST00000450849.7	protein_coding	12/12		INFO_REALIGN_3_PRIME	chr19	TogoVar
ATE1_chr10_121735424_121933031	121770233	A A	AACACACA others(9): Show AACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02293.hp1 HG02647.hp2 HG03239.hp2 others(4): Show HG02293.hp1 HG02647.hp2 HG03239.hp2 HG03669.hp1 NA18940.hp2 NA18971.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0007	a0001c0001t0015 a0001c0002t0003 a0001c0003t0003 others(1): Show a0001c0001t0015 a0001c0002t0003 a0001c0003t0003 a0001c0007t0003	a0001c0001t0015g0208 a0001c0002t0003g0127 a0001c0002t0003g0262 others(4): Show a0001c0001t0015g0208 a0001c0002t0003g0127 a0001c0002t0003g0262 a0001c0003t0003g0297 a0001c0003t0003g0309 a0001c0003t0003g0310 a0001c0007t0003g0266	7	320	0.0219	16	c.137 others(37): Show c.1378+19920_1378+19935dupGTGTGTGTGTGTGTGT	ATE1	ENSG00000107669.19	transcript	ENST00000224652.12	protein_coding	11/11			chr10	TogoVar
ATF1_chr12_50759101_50826162	50818495	G G	GTAAGGAC others(9): Show GTAAGGACTGTACAAAA	intron_variant intron_variant	MODIFIER	NA19072.hp2 NA19072.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0228 a0001c0001t0001g0228	1	382	0.0026	16	c.672 others(33): Show c.672-1139_672-1138insAAGGACTGTACAAAAT	ATF1	ENSG00000123268.9	transcript	ENST00000262053.8	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr12	TogoVar
ATF1_chr12_50759101_50826162	50823598	T T	TATATATA others(9): Show TATATATATAATATAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18943.hp1 NA18943.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0226 a0001c0001t0001g0226	1	382	0.0026	16	c.38 others(27): Show c.3819_*3820insATATATATAATATAGA	ATF1	ENSG00000123268.9	transcript	ENST00000262053.8	protein_coding		2437		chr12	TogoVar
ATF1_chr12_50759101_50826162	50823598	T T	TATATATA others(9): Show TATATATATAATCTATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp1 HG01081.hp1 HG04199.hp1 others(1): Show HG00408.hp1 HG01081.hp1 HG04199.hp1 NA18970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0014 a0001c0001t0001g0023 a0001c0001t0001g0251 others(1): Show a0001c0001t0001g0014 a0001c0001t0001g0023 a0001c0001t0001g0251 a0001c0001t0001g0282	4	382	0.0105	16	c.38 others(27): Show c.3819_*3820insATATATATAATCTATA	ATF1	ENSG00000123268.9	transcript	ENST00000262053.8	protein_coding		2437		chr12	TogoVar
ATF2_chr2_175067259_175173203	175110337	A A	AAAATAAA others(9): Show AAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01175.hp1 HG01891.hp1 others(26): Show HG00735.hp1 HG01175.hp1 HG01891.hp1 HG02109.hp1 HG02257.hp1 HG02300.hp1 HG02559.hp1 HG02615.hp2 HG02630.hp2 HG02647.hp1 HG02698.hp1 HG02717.hp2 HG02895.hp1 HG02922.hp1 HG02970.hp1 HG03130.hp1 HG03139.hp1 HG03225.hp1 HG03239.hp2 HG03486.hp1 HG03491.hp2 HG03492.hp1 HG03710.hp1 HG04115.hp1 NA18522.hp1 NA18906.hp1 NA19030.hp1 NA19240.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0126 a0001c0001t0001g0131 a0001c0001t0001g0134 others(25): Show a0001c0001t0001g0126 a0001c0001t0001g0131 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0220 a0001c0001t0003g0002 a0001c0001t0003g0141 a0001c0001t0003g0142 a0001c0001t0003g0143 a0001c0001t0003g0144 a0001c0001t0003g0145 a0001c0001t0003g0146 a0001c0001t0003g0147 a0001c0001t0003g0148 a0001c0001t0003g0149 a0001c0001t0003g0150 a0001c0001t0003g0151 a0001c0001t0003g0152 a0001c0001t0003g0153 a0001c0001t0003g0154 a0001c0001t0003g0200	29	224	0.1295	16	c.828 others(33): Show c.828+1215_828+1230dupATTTATTTATTTATTT	ATF2	ENSG00000115966.18	transcript	ENST00000264110.7	protein_coding	10/13			chr2	TogoVar
ATF2_chr2_175067259_175173203	175163918	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00323.hp2 HG00408.hp1 others(57): Show HG00099.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00609.hp1 HG00738.hp1 HG01081.hp1 HG01081.hp2 HG01109.hp2 HG01167.hp1 HG01175.hp2 HG01257.hp1 HG01496.hp2 HG01516.hp1 HG02027.hp1 HG02027.hp2 HG02055.hp1 HG02083.hp1 HG02300.hp2 HG02602.hp1 HG02615.hp1 HG02647.hp2 HG02698.hp2 HG02738.hp1 HG02970.hp2 HG03098.hp2 HG03471.hp1 HG03492.hp2 HG03516.hp1 HG03710.hp2 HG03834.hp2 HG03927.hp2 HG04204.hp1 NA18522.hp2 NA18944.hp2 NA18957.hp2 NA18961.hp2 NA18962.hp2 NA18969.hp1 NA18971.hp2 NA18975.hp1 NA18980.hp1 NA18985.hp1 NA18992.hp2 NA18994.hp1 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19003.hp1 NA19054.hp1 NA19055.hp2 NA19062.hp1 NA19068.hp1 NA19068.hp2 NA19070.hp2 NA19084.hp1 NA20805.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0010 a0001c0001t0001 a0001c0001t0007 a0001c0001t0010	a0001c0001t0001g0008 a0001c0001t0001g0059 a0001c0001t0001g0060 others(57): Show a0001c0001t0001g0008 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0117 a0001c0001t0001g0155 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0213 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0007g0086 a0001c0001t0007g0092 a0001c0001t0010g0214	60	224	0.2679	16	c.-14 others(35): Show c.-143+4131_-143+4132insTTTTTTTTTTTTTTTT	ATF2	ENSG00000115966.18	transcript	ENST00000264110.7	protein_coding	1/13			chr2	TogoVar
ATF4_chr22_39515562_39527683	39523993	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18977.hp1 NA18977.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0001 a0002c0002t0002g0001	1	354	0.0028	16	c.13 others(27): Show c.1391_*1392insTTTTTTTTTTTTTTTT	ATF4	ENSG00000128272.18	transcript	ENST00000674920.3	protein_coding		1311		chr22	TogoVar
ATF6B_chr6_32110264_32133246	32120220	C C	CCCCAGCA others(9): Show CCCCAGCAGCTGGAACT	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG03540.hp1 HG02886.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0106 a0001c0001t0002g0110 a0001c0001t0002g0106 a0001c0001t0002g0110	2	439	0.0046	16	c.833 others(31): Show c.833-279_833-264dupAGTTCCAGCTGCTGGG	ATF6B	ENSG00000213676.13	transcript	ENST00000375203.8	protein_coding	8/17			chr6	TogoVar
ATF6_chr1_161761320_161969070	161829189	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0023 a0002c0003t0023	a0002c0003t0023g0239 a0002c0003t0023g0239	1	332	0.0030	16	c.118 others(35): Show c.1187+8038_1187+8053dupTTTTTTTTTTTTTTTT	ATF6	ENSG00000118217.7	transcript	ENST00000367942.4	protein_coding	9/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATF6_chr1_161761320_161969070	161920294	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG01361.hp1 HG01952.hp1 others(12): Show HG00323.hp1 HG01361.hp1 HG01952.hp1 HG02015.hp2 HG03688.hp2 NA18950.hp2 NA18951.hp1 NA18972.hp1 NA18984.hp1 NA18990.hp2 NA19001.hp1 NA19006.hp2 NA19060.hp2 NA19063.hp1 NA19087.hp2	a0003 a0003	a0003c0004 a0003c0009 a0003c0004 a0003c0009	a0003c0004t0001 a0003c0004t0003 a0003c0004t0007 others(1): Show a0003c0004t0001 a0003c0004t0003 a0003c0004t0007 a0003c0009t0036	a0003c0004t0001g0046 a0003c0004t0001g0103 a0003c0004t0003g0059 others(12): Show a0003c0004t0001g0046 a0003c0004t0001g0103 a0003c0004t0003g0059 a0003c0004t0003g0060 a0003c0004t0003g0072 a0003c0004t0003g0079 a0003c0004t0003g0081 a0003c0004t0003g0082 a0003c0004t0003g0093 a0003c0004t0003g0105 a0003c0004t0003g0113 a0003c0004t0003g0114 a0003c0004t0007g0064 a0003c0004t0007g0099 a0003c0009t0036g0073	15	332	0.0452	16	c.180 others(35): Show c.1804+7917_1804+7932dupTTTTTTTTTTTTTTTT	ATF6	ENSG00000118217.7	transcript	ENST00000367942.4	protein_coding	15/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATF7IP2_chr16_10381061_10488638	10475722	G G	GAAAAAAA others(9): Show GAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0002 a0002	a0002c0008 a0002c0008	a0002c0008t0010 a0002c0008t0010	a0002c0008t0010g0032 a0002c0008t0010g0032	1	376	0.0027	16	c.154 others(35): Show c.1549+1740_1549+1755dupAAAAAAAAAAAAAAAA	ATF7IP2	ENSG00000166669.14	transcript	ENST00000562102.6	protein_coding	12/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
ATF7IP_chr12_14360682_14507930	14473288	C C	CTGTATGT others(9): Show CTGTATGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02280.hp2 HG02451.hp1 others(4): Show HG02055.hp1 HG02280.hp2 HG02451.hp1 HG02922.hp1 HG03098.hp2 HG04228.hp1 NA20129.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0002 a0003c0003t0011 a0003c0003t0015 a0001c0001t0002 a0003c0003t0011 a0003c0003t0015	a0001c0001t0002g0028 a0003c0003t0011g0315 a0003c0003t0015g0165 others(4): Show a0001c0001t0002g0028 a0003c0003t0011g0315 a0003c0003t0015g0165 a0003c0003t0015g0166 a0003c0003t0015g0167 a0003c0003t0015g0168 a0003c0003t0015g0169	7	346	0.0202	16	c.286 others(35): Show c.2863-2601_2863-2600insGTATGTGTGTGTGTGT	ATF7IP	ENSG00000171681.13	transcript	ENST00000261168.9	protein_coding	10/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
ATF7IP_chr12_14360682_14507930	14494333	A A	ATATATAT others(9): Show ATATATATATATGTGTG	intron_variant intron_variant	MODIFIER	NA19067.hp1 NA19067.hp1	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0008 a0002c0006t0008	a0002c0006t0008g0226 a0002c0006t0008g0226	1	346	0.0029	16	c.328 others(35): Show c.3281-1897_3281-1896insATATATATATGTGTGT	ATF7IP	ENSG00000171681.13	transcript	ENST00000261168.9	protein_coding	13/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
ATF7_chr12_53507054_53631382	53529710	T T	TACACACA others(9): Show TACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00408.hp1 others(46): Show HG00099.hp2 HG00280.hp1 HG00408.hp1 HG00544.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00673.hp2 HG01074.hp1 HG01081.hp1 HG01109.hp1 HG01123.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp2 HG01192.hp2 HG01255.hp1 HG01358.hp1 HG01496.hp1 HG01952.hp2 HG01993.hp1 HG02015.hp2 HG02055.hp1 HG02300.hp1 HG02970.hp2 HG03453.hp2 HG03492.hp1 HG03834.hp2 NA18948.hp1 NA18955.hp2 NA18959.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp1 NA18973.hp2 NA18980.hp1 NA18984.hp2 NA18991.hp2 NA18993.hp2 NA18994.hp1 NA18998.hp1 NA19004.hp1 NA19068.hp1 NA19070.hp1 NA19070.hp2 NA19084.hp2 NA19087.hp1 NA20300.hp1 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0004 a0001c0001 a0001c0002 a0002c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0012 a0001c0001t0013 a0001c0001t0027 a0001c0002t0001 a0002c0004t0001	a0001c0001t0001g0149 a0001c0001t0001g0158 a0001c0001t0001g0197 others(46): Show a0001c0001t0001g0149 a0001c0001t0001g0158 a0001c0001t0001g0197 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0226 a0001c0001t0001g0229 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0238 a0001c0001t0001g0240 a0001c0001t0001g0255 a0001c0001t0001g0260 a0001c0001t0001g0285 a0001c0001t0001g0292 a0001c0001t0001g0317 a0001c0001t0001g0328 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0003g0221 a0001c0001t0004g0164 a0001c0001t0012g0254 a0001c0001t0012g0284 a0001c0001t0013g0020 a0001c0001t0027g0194 a0001c0002t0001g0324 a0001c0002t0001g0325 a0001c0002t0001g0326 a0001c0002t0001g0327 a0002c0004t0001g0208	49	330	0.1485	16	c.927 others(33): Show c.927+2018_927+2033dupGTGTGTGTGTGTGTGT	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	9/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53529710	T T	TATACACA others(9): Show TATACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00621.hp2 HG00741.hp2 others(17): Show HG00544.hp2 HG00621.hp2 HG00741.hp2 HG01258.hp2 HG01261.hp1 HG01433.hp1 HG01943.hp2 HG01993.hp2 HG02135.hp2 HG02148.hp2 HG02300.hp2 HG02523.hp1 HG03491.hp2 HG03492.hp2 NA18941.hp1 NA18944.hp2 NA18973.hp1 NA18989.hp2 NA19000.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0007 a0001c0001t0013 a0001c0001t0002 a0001c0001t0007 a0001c0001t0013	a0001c0001t0002g0001 a0001c0001t0002g0022 a0001c0001t0002g0023 others(17): Show a0001c0001t0002g0001 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0002g0026 a0001c0001t0002g0109 a0001c0001t0002g0110 a0001c0001t0002g0112 a0001c0001t0002g0125 a0001c0001t0002g0131 a0001c0001t0002g0135 a0001c0001t0002g0137 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0007g0113 a0001c0001t0007g0114 a0001c0001t0007g0130 a0001c0001t0007g0136 a0001c0001t0007g0138 a0001c0001t0013g0021	20	330	0.0606	16	c.927 others(33): Show c.927+2033_927+2034insGTGTGTGTGTGTGTAT	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	9/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53529734	C C	CACACACA others(9): Show CACACACACACACATAT	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02280.hp2 HG02486.hp2 HG02257.hp2 HG02280.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0044 a0001c0001t0001g0047 a0001c0001t0001g0055 a0001c0001t0001g0044 a0001c0001t0001g0047 a0001c0001t0001g0055	3	330	0.0091	16	c.927 others(33): Show c.927+2009_927+2010insATATGTGTGTGTGTGT	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	9/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53535328	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02523.hp1 HG02886.hp1 others(3): Show HG02145.hp2 HG02523.hp1 HG02886.hp1 HG02965.hp2 HG03491.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0036 others(3): Show a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0155 a0001c0001t0002g0109 a0001c0001t0002g0147	6	330	0.0182	16	c.403 others(31): Show c.403-685_403-670dupTTTTTTTTTTTTTTTT	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	5/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53542107	G G	GTTTTTTT others(9): Show GTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01167.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0232 a0001c0001t0001g0232	1	330	0.0030	16	c.264 others(33): Show c.264+1207_264+1222dupAAAAAAAAAAAAAAAA	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	4/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53583926	C C	CAAATAAG others(9): Show CAAATAAGCATGCTCAA	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0012	1	330	0.0030	16	c.48+ others(33): Show c.48+17011_48+17026dupTTGAGCATGCTTATTT	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	2/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53587366	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19086.hp1 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0280 a0001c0001t0001g0280	1	330	0.0030	16	c.48+ others(33): Show c.48+13571_48+13586dupTTTTTTTTTTTTTTTT	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	2/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53587820	C C	CATATATA others(9): Show CATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG04184.hp1 HG04184.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0029 a0001c0001t0029	a0001c0001t0029g0236 a0001c0001t0029g0236	1	330	0.0030	16	c.48+ others(33): Show c.48+13117_48+13132dupATATATATATATATAT	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	2/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53587843	A A	ATATATAT others(9): Show ATATATATATATATATT	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02897.hp2 HG02896.hp1 HG02897.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0058 a0001c0001t0001g0059	2	330	0.0061	16	c.48+ others(33): Show c.48+13109_48+13110insAATATATATATATATA	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	2/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53587844	T T	TATATATA others(9): Show TATATATATATATATTA	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00733.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0019	1	330	0.0030	16	c.48+ others(33): Show c.48+13108_48+13109insTAATATATATATATAT	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	2/11			chr12	TogoVar
ATG10_chr5_81967023_82261133	82161696	A A	AACACACA others(9): Show AACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00597.hp1 HG00639.hp1 others(18): Show HG00323.hp1 HG00597.hp1 HG00639.hp1 HG01192.hp1 HG01243.hp1 HG01346.hp1 HG01496.hp1 HG01981.hp1 HG02132.hp1 HG02165.hp1 HG02602.hp1 HG02622.hp2 HG02698.hp1 HG02976.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03540.hp1 NA18962.hp1 NA20129.hp1 NA21309.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0005	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0005c0005	a0001c0001t0001 a0001c0001t0003 a0001c0001t0016 others(8): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0016 a0002c0002t0002 a0002c0002t0006 a0002c0002t0008 a0002c0002t0030 a0002c0002t0040 a0003c0003t0001 a0003c0003t0003 a0005c0005t0010	a0001c0001t0001g0050 a0001c0001t0001g0133 a0001c0001t0001g0137 others(18): Show a0001c0001t0001g0050 a0001c0001t0001g0133 a0001c0001t0001g0137 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0211 a0001c0001t0003g0130 a0001c0001t0016g0031 a0002c0002t0002g0115 a0002c0002t0006g0071 a0002c0002t0006g0116 a0002c0002t0008g0073 a0002c0002t0008g0074 a0002c0002t0030g0084 a0002c0002t0040g0004 a0003c0003t0001g0188 a0003c0003t0003g0207 a0005c0005t0010g0001 a0005c0005t0010g0002 a0005c0005t0010g0003 a0005c0005t0010g0007	21	226	0.0929	16	c.217 others(33): Show c.217-2681_217-2666dupCACACACACACACACA	ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG13_chr11_46612553_46679518	46654281	T T	TTATATAT others(9): Show TTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0037 a0001c0001t0004g0037	1	218	0.0046	16	c.459 others(33): Show c.459-1951_459-1950insATATATATATATATAT	ATG13	ENSG00000175224.17	transcript	ENST00000683050.1	protein_coding	7/18		INFO_REALIGN_3_PRIME	chr11	TogoVar
ATG13_chr11_46612553_46679518	46656314	T T	TCTCCTAA others(9): Show TCTCCTAACTTCAGAGA	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG01515.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0130 a0001c0001t0001g0130	1	218	0.0046	16	c.499 others(29): Show c.499+42_499+57dupCTCCTAACTTCAGAGA	ATG13	ENSG00000175224.17	transcript	ENST00000683050.1	protein_coding	8/18		INFO_REALIGN_3_PRIME	chr11	TogoVar
ATG14_chr14_55361391_55416830	55380875	A A	ATATATAT others(9): Show ATATATATATATTTTTT	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01074.hp1 HG03654.hp1 others(3): Show HG00741.hp1 HG01074.hp1 HG03654.hp1 HG03710.hp1 HG03942.hp2 HG04199.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0012 a0001c0001 a0006c0012	a0001c0001t0005 a0001c0001t0012 a0006c0012t0012 a0001c0001t0005 a0001c0001t0012 a0006c0012t0012	a0001c0001t0005g0197 a0001c0001t0005g0200 a0001c0001t0005g0221 others(3): Show a0001c0001t0005g0197 a0001c0001t0005g0200 a0001c0001t0005g0221 a0001c0001t0012g0189 a0001c0001t0012g0193 a0006c0012t0012g0191	6	366	0.0164	16	c.878 others(31): Show c.878-186_878-185insAAAAAATATATATATA	ATG14	ENSG00000126775.9	transcript	ENST00000247178.6	protein_coding	6/9			chr14	TogoVar
ATG14_chr14_55361391_55416830	55380875	A A	ATATATAT others(9): Show ATATATATATTTTTTTT	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01169.hp2 HG01175.hp2 others(1): Show HG01081.hp2 HG01169.hp2 HG01175.hp2 HG01258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0192 a0001c0001t0005g0194 a0001c0001t0005g0195 others(1): Show a0001c0001t0005g0192 a0001c0001t0005g0194 a0001c0001t0005g0195 a0001c0001t0005g0198	4	366	0.0109	16	c.878 others(31): Show c.878-186_878-185insAAAAAAAATATATATA	ATG14	ENSG00000126775.9	transcript	ENST00000247178.6	protein_coding	6/9			chr14	TogoVar
ATG14_chr14_55361391_55416830	55402922	A A	AATATATA others(9): Show AATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0229 a0001c0001t0001g0229	1	366	0.0027	16	c.222 others(33): Show c.222-5489_222-5488insATATATATATATATAT	ATG14	ENSG00000126775.9	transcript	ENST00000247178.6	protein_coding	1/9			chr14	TogoVar
ATG14_chr14_55361391_55416830	55402924	A A	AATATATA others(9): Show AATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03491.hp1 HG03491.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0016 a0001c0002t0016	a0001c0002t0016g0045 a0001c0002t0016g0045	1	366	0.0027	16	c.222 others(33): Show c.222-5491_222-5490insATATATATATATATAT	ATG14	ENSG00000126775.9	transcript	ENST00000247178.6	protein_coding	1/9			chr14	TogoVar
ATG14_chr14_55361391_55416830	55402926	A A	AAAATATA others(9): Show AAAATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18963.hp1 NA18963.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0223 a0001c0002t0002g0223	1	366	0.0027	16	c.222 others(33): Show c.222-5493_222-5492insATATATATATATATTT	ATG14	ENSG00000126775.9	transcript	ENST00000247178.6	protein_coding	1/9			chr14	TogoVar

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