Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
C17orf98_chr17_38830086_38846438	38842871	G G	GTCTGTCT others(9): Show GTCTGTCTGTCTGTCTA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG01255.hp2 HG01361.hp2 others(8): Show HG01243.hp2 HG01255.hp2 HG01361.hp2 HG01515.hp2 HG02071.hp1 HG02148.hp2 HG03453.hp1 HG03834.hp2 NA18949.hp1 NA19064.hp2 NA19083.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0001 a0001c0001t0001 a0003c0003t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0007 others(5): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0011 a0001c0001t0001g0026 a0001c0001t0001g0041 a0001c0001t0001g0098 a0003c0003t0001g0144	11	431	0.0255	16	c.-14 others(27): Show c.-1483_-1482insTAGACAGACAGACAGA	C17orf98	ENSG00000275489.2	transcript	ENST00000614158.2	protein_coding		1434		chr17	TogoVar
C18orf63_chr18_74310839_74364189	74360140	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03669.hp1 HG04115.hp1 HG04199.hp1 HG03669.hp1 HG04115.hp1 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0159 a0001c0001t0015g0160 a0001c0001t0015g0161 a0001c0001t0015g0159 a0001c0001t0015g0160 a0001c0001t0015g0161	3	372	0.0081	16	c.36 others(27): Show c.3693_*3694insAAAAAAAAAAAAAAAA	C18orf63	ENSG00000206043.7	transcript	ENST00000579455.2	protein_coding		952		chr18	TogoVar
C19orf18_chr19_57953437_57979534	57965117	T T	TTTTATTT others(9): Show TTTTATTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00738.hp1 HG01074.hp1 others(33): Show HG00642.hp1 HG00738.hp1 HG01074.hp1 HG01255.hp2 HG01261.hp2 HG01516.hp1 HG01952.hp1 HG02040.hp1 HG02145.hp1 HG02280.hp2 HG02451.hp1 HG02486.hp1 HG02622.hp2 HG02647.hp1 HG02717.hp2 HG02735.hp1 HG02970.hp2 HG03139.hp1 HG03486.hp2 HG03704.hp1 HG04184.hp2 NA18522.hp2 NA18980.hp2 NA18982.hp1 NA19001.hp1 NA19005.hp1 NA19006.hp1 NA19063.hp1 NA19066.hp1 NA19070.hp2 NA19079.hp2 NA19082.hp2 NA19083.hp1 NA19088.hp2 NA19240.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0012 a0001c0001t0001g0104 a0001c0001t0001g0119 others(16): Show a0001c0001t0001g0012 a0001c0001t0001g0104 a0001c0001t0001g0119 a0001c0001t0001g0138 a0001c0001t0002g0001 a0001c0001t0002g0022 a0001c0001t0002g0024 a0001c0001t0002g0026 a0001c0001t0002g0028 a0001c0001t0002g0031 a0001c0001t0002g0064 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0070 a0001c0001t0002g0071 a0001c0001t0002g0074 a0001c0001t0002g0077 a0001c0001t0002g0079 a0001c0001t0002g0090	36	408	0.0882	16	c.371 others(33): Show c.371+1397_371+1412dupTAAATAAATAAATAAA	C19orf18	ENSG00000177025.3	transcript	ENST00000314391.3	protein_coding	4/5			chr19	TogoVar
C19orf18_chr19_57953437_57979534	57973145	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0092 a0001c0001t0001g0092	1	408	0.0025	16	c.227 others(31): Show c.227-657_227-642dupTTTTTTTTTTTTTTTT	C19orf18	ENSG00000177025.3	transcript	ENST00000314391.3	protein_coding	2/5			chr19	TogoVar
C19orf38_chr19_10843415_10874790	10857894	A A	AAAAGAAA others(9): Show AAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG01358.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0170 a0001c0001t0001g0170	1	384	0.0026	16	c.434 others(31): Show c.434-398_434-383dupGAAAGAAAGAAAGAAA	C19orf38	ENSG00000214212.9	transcript	ENST00000397820.5	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr19	TogoVar
C19orf47_chr19_40314536_40353397	40333274	A A	AAAATAAA others(9): Show AAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02559.hp2 HG02698.hp2 others(5): Show HG01255.hp2 HG02559.hp2 HG02698.hp2 NA18950.hp2 NA18981.hp1 NA18986.hp2 NA19087.hp1 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0023 a0001c0001t0001g0184 a0001c0001t0001g0193 others(4): Show a0001c0001t0001g0023 a0001c0001t0001g0184 a0001c0001t0001g0193 a0001c0001t0003g0046 a0001c0001t0003g0057 a0001c0001t0003g0071 a0001c0001t0003g0072	8	384	0.0208	16	c.301 others(31): Show c.301+561_301+576dupATTTATTTATTTATTT	C19orf47	ENSG00000160392.14	transcript	ENST00000683109.1	protein_coding	5/8			chr19	TogoVar
C19orf85_chr19_55458001_55469751	55466676	G G	GGTGTGTG others(9): Show GGTGTGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp1 HG01175.hp1 HG01175.hp2 others(20): Show HG00738.hp1 HG01175.hp1 HG01175.hp2 HG02027.hp1 HG02109.hp2 HG02300.hp1 HG02486.hp1 HG02723.hp2 HG02735.hp2 HG02976.hp2 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03491.hp2 HG03492.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp2 NA18951.hp2 NA18984.hp1 NA19004.hp2 NA19058.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(1): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0008	23	402	0.0572	16	c.-21 others(27): Show c.-2123_-2122insACACACACACACACAC	C19orf85	ENSG00000283567.2	transcript	ENST00000635964.2	protein_coding		1926		chr19	TogoVar
C1D_chr2_68036130_68068004	68036846	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0065 a0002c0002t0001g0065	1	368	0.0027	16	c.60 others(27): Show c.6042_*6043insAAAAAAAAAAAAAAAA	C1D	ENSG00000197223.12	transcript	ENST00000410067.8	protein_coding		4283		chr2	TogoVar
C1QL2_chr2_119151243_119163751	119155227	T T	TACACACA others(9): Show TACACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00621.hp1 NA18949.hp1 NA18970.hp2 others(2): Show HG00621.hp1 NA18949.hp1 NA18970.hp2 NA19055.hp2 NA19083.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0002 a0001c0002t0002g0002	5	412	0.0121	16	c.15 others(27): Show c.1574_*1575insGTGTGTGTGTGTGTGT	C1QL2	ENSG00000144119.4	transcript	ENST00000272520.4	protein_coding		1015		chr2	TogoVar
C1QL3_chr10_16508734_16526879	16519140	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG01515.hp1 HG03225.hp1 HG00558.hp2 HG01515.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0100 a0001c0001t0003g0069 a0001c0001t0003g0070 a0001c0001t0002g0100 a0001c0001t0003g0069 a0001c0001t0003g0070	3	460	0.0065	16	c.588 others(33): Show c.588+1322_588+1337dupAAAAAAAAAAAAAAAA	C1QL3	ENSG00000165985.11	transcript	ENST00000298943.4	protein_coding	1/1			chr10	TogoVar
C1QL4_chr12_49327409_49342188	49337716	A A	AGTGTGTG others(9): Show AGTGTGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02132.hp1 HG02132.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	300	0.0033	16	c.-12 others(27): Show c.-1240_-1239insACACACACACACACAC	C1QL4	ENSG00000186897.5	transcript	ENST00000334221.5	protein_coding		529		chr12	TogoVar
C1QTNF12_chr1_1237453_1251722	1245412	C C	CAGAGAGC others(9): Show CAGAGAGCAGGCTGCAG	intron_variant intron_variant	MODIFIER	NA18956.hp2 NA18956.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0084 a0002c0002t0002g0084	1	328	0.0031	16	c.178 others(31): Show c.178-931_178-916dupCTGCAGCCTGCTCTCT	C1QTNF12	ENSG00000184163.3	transcript	ENST00000330388.2	protein_coding	1/7			chr1	TogoVar
C1QTNF1_chr17_79019169_79054788	79023704	G G	GCGCGCAC others(9): Show GCGCGCACACACACACA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18946.hp2 NA18946.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0071 a0001c0001t0010g0071	1	392	0.0026	16	c.-80 others(25): Show c.-805_-804insCGCGCACACACACACA	C1QTNF1	ENSG00000173918.15	transcript	ENST00000579760.6	protein_coding		464		chr17	TogoVar
C1QTNF1_chr17_79019169_79054788	79023704	G G	GCGCGCGC others(9): Show GCGCGCGCACACACACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp1 HG01516.hp2 HG02074.hp2 others(5): Show HG00408.hp1 HG01516.hp2 HG02074.hp2 HG02129.hp2 HG02132.hp2 HG03225.hp2 HG03710.hp2 NA19090.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0031 a0001c0002t0032 a0001c0002t0003 a0001c0002t0031 a0001c0002t0032	a0001c0002t0003g0007 a0001c0002t0003g0017 a0001c0002t0003g0042 others(5): Show a0001c0002t0003g0007 a0001c0002t0003g0017 a0001c0002t0003g0042 a0001c0002t0003g0209 a0001c0002t0003g0221 a0001c0002t0003g0222 a0001c0002t0031g0219 a0001c0002t0032g0232	8	392	0.0204	16	c.-80 others(25): Show c.-805_-804insCGCGCGCACACACACA	C1QTNF1	ENSG00000173918.15	transcript	ENST00000579760.6	protein_coding		464		chr17	TogoVar
C1QTNF1_chr17_79019169_79054788	79023704	G G	GCGCGCGC others(9): Show GCGCGCGCGCACACACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00597.hp2 HG02056.hp1 HG03927.hp1 HG00597.hp2 HG02056.hp1 HG03927.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0040 a0001c0002t0003g0224 a0001c0002t0003g0240 a0001c0002t0003g0040 a0001c0002t0003g0224 a0001c0002t0003g0240	3	392	0.0077	16	c.-80 others(25): Show c.-805_-804insCGCGCGCGCACACACA	C1QTNF1	ENSG00000173918.15	transcript	ENST00000579760.6	protein_coding		464		chr17	TogoVar
C1QTNF1_chr17_79019169_79054788	79023704	G G	GCGCGCGC others(9): Show GCGCGCGCGCGCACACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02148.hp1 HG02148.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0112 a0001c0002t0002g0112	1	392	0.0026	16	c.-80 others(25): Show c.-805_-804insCGCGCGCGCGCACACA	C1QTNF1	ENSG00000173918.15	transcript	ENST00000579760.6	protein_coding		464		chr17	TogoVar
C1QTNF1_chr17_79019169_79054788	79030485	T T	TTTTCTTT others(9): Show TTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00544.hp1 HG01346.hp2 others(10): Show HG00280.hp2 HG00544.hp1 HG01346.hp2 HG01993.hp1 HG02922.hp2 HG02970.hp2 HG03041.hp1 HG03516.hp1 HG06807.hp1 NA18966.hp2 NA18999.hp1 NA19067.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0013 others(1): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0013 a0001c0001t0022	a0001c0001t0001g0010 a0001c0001t0001g0024 a0001c0001t0001g0032 others(7): Show a0001c0001t0001g0010 a0001c0001t0001g0024 a0001c0001t0001g0032 a0001c0001t0001g0105 a0001c0001t0001g0113 a0001c0001t0001g0163 a0001c0001t0001g0263 a0001c0001t0005g0101 a0001c0001t0013g0162 a0001c0001t0022g0010	13	392	0.0332	16	c.-15 others(33): Show c.-15+6022_-15+6037dupTCTTTCTTTCTTTCTT	C1QTNF1	ENSG00000173918.15	transcript	ENST00000579760.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr17	TogoVar
C1QTNF2_chr5_160342754_160375626	160354597	A A	AATATATA others(9): Show AATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	452	0.0022	16	c.244 others(31): Show c.244+170_244+171insATATATATATATATAT	C1QTNF2	ENSG00000145861.9	transcript	ENST00000652664.2	protein_coding	2/2			chr5	TogoVar
C1QTNF2_chr5_160342754_160375626	160354598	G G	GTATATAT others(9): Show GTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01081.hp2 HG03209.hp1 others(2): Show HG00639.hp1 HG01081.hp2 HG03209.hp1 HG03927.hp1 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0007 a0001c0001t0002 a0001c0001t0005 a0001c0001t0007	a0001c0001t0002g0096 a0001c0001t0002g0242 a0001c0001t0005g0195 others(2): Show a0001c0001t0002g0096 a0001c0001t0002g0242 a0001c0001t0005g0195 a0001c0001t0005g0196 a0001c0001t0007g0216	5	452	0.0111	16	c.244 others(31): Show c.244+154_244+169dupTATATATATATATATA	C1QTNF2	ENSG00000145861.9	transcript	ENST00000652664.2	protein_coding	2/2			chr5	TogoVar
C1QTNF2_chr5_160342754_160375626	160354631	T T	TATATATA others(9): Show TATATATATATAGATAG	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0021	a0001c0001t0021g0200 a0001c0001t0021g0200	1	452	0.0022	16	c.244 others(31): Show c.244+136_244+137insCTATCTATATATATAT	C1QTNF2	ENSG00000145861.9	transcript	ENST00000652664.2	protein_coding	2/2			chr5	TogoVar
C1QTNF7_chr4_15423033_15451167	15450512	T T	TAAAAAAA others(9): Show TAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0128 a0001c0001t0012g0128	1	444	0.0023	16	c.77 others(27): Show c.7713_*7714insAAAAAAAAAAAAAAAA	C1QTNF7	ENSG00000163145.13	transcript	ENST00000444304.3	protein_coding		4346		chr4	TogoVar
C1QTNF9_chr13_24304580_24327531	24309283	T T	TTATATAT others(9): Show TTATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0002 a0004c0004t0002	a0004c0004t0002g0074 a0004c0004t0002g0074	1	466	0.0022	16	c.-35 others(25): Show c.-356_-355insTATATATATATATATA	C1QTNF9	ENSG00000240654.6	transcript	ENST00000332018.5	protein_coding		296		chr13	TogoVar
C1S_chr12_7055718_7076032	7064030	T T	TCACACAC others(9): Show TCACACACACACACACA	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG03195.hp2 HG06807.hp1 others(1): Show HG02886.hp1 HG03195.hp2 HG06807.hp1 NA19043.hp2	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0002 a0004c0006t0002	a0004c0006t0002g0071 a0004c0006t0002g0072 a0004c0006t0002g0073 others(1): Show a0004c0006t0002g0071 a0004c0006t0002g0072 a0004c0006t0002g0073 a0004c0006t0002g0074	4	370	0.0108	16	c.392 others(31): Show c.392-234_392-233insACACACACACACACAC	C1S	ENSG00000182326.17	transcript	ENST00000360817.10	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr12	TogoVar
C1S_chr12_7055718_7076032	7064046	A A	ACACACAC others(9): Show ACACACACACACACACC	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0079 a0001c0001t0002g0079	1	370	0.0027	16	c.392 others(31): Show c.392-220_392-219insACACACACACACACCC	C1S	ENSG00000182326.17	transcript	ENST00000360817.10	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr12	TogoVar
C1orf100_chr1_244347635_244394663	244394248	T T	TTAAACTT others(9): Show TTAAACTTTTTTCTGCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00597.hp1 HG00741.hp1 others(27): Show HG00099.hp2 HG00597.hp1 HG00741.hp1 HG01261.hp2 HG01496.hp2 HG01952.hp1 HG02257.hp2 HG02486.hp1 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02896.hp1 HG02897.hp2 HG03098.hp1 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03540.hp2 HG03579.hp2 HG03831.hp2 NA18940.hp2 NA18979.hp2 NA19003.hp2 NA19043.hp1 NA19060.hp1 NA19090.hp2 NA19240.hp2 NA20300.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0003 a0003c0003t0003 a0001c0001t0001 a0001c0001t0003 a0003c0003t0003	a0001c0001t0001g0007 a0001c0001t0001g0011 a0001c0001t0001g0015 others(26): Show a0001c0001t0001g0007 a0001c0001t0001g0011 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0112 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0122 a0001c0001t0001g0125 a0001c0001t0001g0130 a0001c0001t0001g0227 a0001c0001t0001g0260 a0001c0001t0001g0272 a0001c0001t0001g0302 a0001c0001t0001g0341 a0001c0001t0001g0352 a0001c0001t0001g0353 a0001c0001t0001g0359 a0001c0001t0001g0394 a0001c0001t0001g0396 a0001c0001t0001g0422 a0001c0001t0001g0429 a0001c0001t0001g0442 a0001c0001t0003g0054 a0001c0001t0003g0156 a0001c0001t0003g0166 a0001c0001t0003g0252 a0001c0001t0003g0273 a0003c0003t0003g0080	30	452	0.0664	16	c.51 others(27): Show c.5179_*5180insTAAACTTTTTTCTGCC	C1orf100	ENSG00000173728.11	transcript	ENST00000308105.5	protein_coding		4586		chr1	TogoVar
C1orf100_chr1_244347635_244394663	244394248	T T	TTATACTT others(9): Show TTATACTTTTTTCTGCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00323.hp2 HG00609.hp2 others(114): Show HG00099.hp1 HG00323.hp2 HG00609.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00735.hp1 HG00738.hp2 HG00741.hp2 HG01069.hp2 HG01070.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp2 HG01361.hp2 HG01433.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01928.hp2 HG01978.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02258.hp2 HG02273.hp2 HG02280.hp2 HG02293.hp1 HG02559.hp1 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02683.hp2 HG02717.hp1 HG02723.hp1 HG02735.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03098.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03491.hp2 HG03492.hp2 HG03540.hp1 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03834.hp1 HG03927.hp2 HG03942.hp1 HG04184.hp1 HG04184.hp2 HG04228.hp1 NA18906.hp2 NA18961.hp1 NA18966.hp2 NA18969.hp1 NA18969.hp2 NA18972.hp2 NA18984.hp1 NA18987.hp1 NA18989.hp2 NA19002.hp1 NA19043.hp2 NA19054.hp2 NA19055.hp2 NA19060.hp2 NA19066.hp1 NA19068.hp2 NA19080.hp1 NA19084.hp2 NA19240.hp1 NA20129.hp2 NA20300.hp1 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0004 a0004c0002 a0001c0001 a0002c0004 a0004c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0002c0004t0002 a0004c0002t0002	a0001c0001t0001g0209 a0001c0001t0001g0213 a0001c0001t0002g0001 others(110): Show a0001c0001t0001g0209 a0001c0001t0001g0213 a0001c0001t0002g0001 a0001c0001t0002g0004 a0001c0001t0002g0005 a0001c0001t0002g0008 a0001c0001t0002g0018 a0001c0001t0002g0026 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0055 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0069 a0001c0001t0002g0074 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0084 a0001c0001t0002g0087 a0001c0001t0002g0091 a0001c0001t0002g0092 a0001c0001t0002g0095 a0001c0001t0002g0097 a0001c0001t0002g0099 a0001c0001t0002g0100 a0001c0001t0002g0101 a0001c0001t0002g0102 a0001c0001t0002g0104 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0113 a0001c0001t0002g0116 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0126 a0001c0001t0002g0127 a0001c0001t0002g0128 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0137 a0001c0001t0002g0138 a0001c0001t0002g0159 a0001c0001t0002g0171 a0001c0001t0002g0182 a0001c0001t0002g0187 a0001c0001t0002g0195 a0001c0001t0002g0197 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0210 a0001c0001t0002g0224 a0001c0001t0002g0265 a0001c0001t0002g0284 a0001c0001t0002g0287 a0001c0001t0002g0291 a0001c0001t0002g0328 a0001c0001t0002g0338 a0001c0001t0002g0339 a0001c0001t0002g0345 a0001c0001t0002g0346 a0001c0001t0002g0347 a0001c0001t0002g0349 a0001c0001t0002g0355 a0001c0001t0002g0356 a0001c0001t0002g0357 a0001c0001t0002g0360 a0001c0001t0002g0362 a0001c0001t0002g0363 a0001c0001t0002g0364 a0001c0001t0002g0365 a0001c0001t0002g0366 a0001c0001t0002g0370 a0001c0001t0002g0374 a0001c0001t0002g0376 a0001c0001t0002g0377 a0001c0001t0002g0383 a0001c0001t0002g0386 a0001c0001t0002g0390 a0001c0001t0002g0391 a0001c0001t0002g0399 a0001c0001t0002g0400 a0001c0001t0002g0401 a0001c0001t0002g0402 a0001c0001t0002g0407 a0001c0001t0002g0410 a0001c0001t0002g0411 a0001c0001t0002g0415 a0001c0001t0002g0416 a0001c0001t0002g0424 a0001c0001t0002g0425 a0001c0001t0002g0427 a0001c0001t0002g0428 a0001c0001t0002g0432 a0001c0001t0002g0434 a0001c0001t0003g0142 a0001c0001t0004g0012 a0001c0001t0004g0121 a0001c0001t0004g0342 a0001c0001t0004g0384 a0002c0004t0002g0017 a0004c0002t0002g0072	117	452	0.2589	16	c.51 others(27): Show c.5179_*5180insTATACTTTTTTCTGCC	C1orf100	ENSG00000173728.11	transcript	ENST00000308105.5	protein_coding		4586		chr1	TogoVar
C1orf109_chr1_37676570_37695529	37679973	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02486.hp1 HG02615.hp2 HG02896.hp2 others(7): Show HG02486.hp1 HG02615.hp2 HG02896.hp2 HG02897.hp1 HG02970.hp1 HG03492.hp2 HG03540.hp2 HG06807.hp2 NA18970.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005	a0001c0001t0002g0019 a0001c0001t0003g0030 a0001c0001t0003g0031 others(3): Show a0001c0001t0002g0019 a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0001t0003g0050 a0001c0001t0003g0126 a0001c0001t0005g0048	10	432	0.0232	16	c.31 others(27): Show c.3149_*3150insTTTTTTTTTTTTTTTT	C1orf109	ENSG00000116922.15	transcript	ENST00000486637.2	protein_coding		1596		chr1	TogoVar
C1orf127_chr1_10941475_10987076	10986123	G G	GCACACAC others(9): Show GCACACACACACACACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00609.hp1 HG00741.hp2 HG01261.hp1 others(7): Show HG00609.hp1 HG00741.hp2 HG01261.hp1 HG01891.hp2 HG02922.hp2 HG03486.hp1 NA18747.hp2 NA18953.hp2 NA18992.hp2 NA20129.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0003 a0002c0002 others(1): Show a0001c0001 a0001c0003 a0002c0002 a0003c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0003t0001 a0002c0002t0001 a0003c0006t0004	a0001c0001t0001g0007 a0001c0001t0001g0051 a0001c0001t0002g0085 others(7): Show a0001c0001t0001g0007 a0001c0001t0001g0051 a0001c0001t0002g0085 a0001c0001t0003g0083 a0001c0003t0001g0362 a0001c0003t0001g0364 a0002c0002t0001g0098 a0002c0002t0001g0102 a0002c0002t0001g0115 a0003c0006t0004g0363	10	392	0.0255	16	c.-40 others(27): Show c.-4087_-4086insTGTGTGTGTGTGTGTG	C1orf127	ENSG00000175262.15	transcript	ENST00000377004.9	protein_coding		4048		chr1	TogoVar
C1orf167_chr1_11757193_11794585	11757893	C C	CGTGTGTG others(9): Show CGTGTGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00544.hp1 HG00544.hp1	a0048 a0048	a0048c0053 a0048c0053	a0048c0053t0001 a0048c0053t0001	a0048c0053t0001g0309 a0048c0053t0001g0309	1	350	0.0029	16	c.-44 others(27): Show c.-4483_-4482insGTGTGTGTGTGTGTGT	C1orf167	ENSG00000215910.8	transcript	ENST00000688073.1	protein_coding		4299		chr1	TogoVar
C1orf185_chr1_51097228_51153086	51103410	A A	AACACACA others(9): Show AACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02965.hp2 NA20905.hp1 HG02965.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0153 a0001c0001t0001g0154	2	248	0.0081	16	c.16+ others(31): Show c.16+1185_16+1200dupCACACACACACACACA	C1orf185	ENSG00000204006.11	transcript	ENST00000371759.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr1	TogoVar
C1orf198_chr1_230832119_230873521	230872068	T T	TGTTTTGT others(9): Show TGTTTTGTTTTGTTTTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG00280.hp1 HG00423.hp2 others(24): Show HG00140.hp2 HG00280.hp1 HG00423.hp2 HG00597.hp2 HG00741.hp1 HG01070.hp1 HG01192.hp2 HG01255.hp2 HG01257.hp1 HG01981.hp1 HG02155.hp1 HG02683.hp2 HG02698.hp2 HG03239.hp1 HG03490.hp1 HG03492.hp1 HG03688.hp1 HG03704.hp1 NA18946.hp2 NA18963.hp2 NA18969.hp2 NA18990.hp1 NA19054.hp2 NA19084.hp1 NA19085.hp1 NA19088.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0014 a0001c0001t0019 a0001c0001t0022	a0001c0001t0001g0006 a0001c0001t0001g0087 a0001c0001t0001g0091 others(17): Show a0001c0001t0001g0006 a0001c0001t0001g0087 a0001c0001t0001g0091 a0001c0001t0001g0093 a0001c0001t0001g0251 a0001c0001t0002g0029 a0001c0001t0002g0030 a0001c0001t0002g0092 a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0097 a0001c0001t0002g0099 a0001c0001t0002g0100 a0001c0001t0002g0107 a0001c0001t0002g0108 a0001c0001t0002g0110 a0001c0001t0006g0090 a0001c0001t0014g0098 a0001c0001t0019g0088 a0001c0001t0022g0089	27	428	0.0631	16	c.-35 others(27): Show c.-3557_-3556insCAAAACAAAACAAAAC	C1orf198	ENSG00000119280.17	transcript	ENST00000366663.10	protein_coding		3548		chr1	TogoVar
C1orf21_chr1_184382029_184634019	184382531	A A	AATAAATA others(9): Show AATAAATAAATAAATAC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18978.hp1 NA18978.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0045 a0001c0001t0045	a0001c0001t0045g0220 a0001c0001t0045g0220	1	232	0.0043	16	c.-49 others(27): Show c.-4962_-4961insATAAATAAATAAATAC	C1orf21	ENSG00000116667.15	transcript	ENST00000235307.7	protein_coding		4497		chr1	TogoVar
C1orf21_chr1_184382029_184634019	184386787	G G	GCACACAC others(9): Show GCACACACACACACACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG02809.hp1 HG03927.hp2 HG00099.hp1 HG02809.hp1 HG03927.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0028 a0001c0001t0001 a0001c0001t0006 a0001c0001t0028	a0001c0001t0001g0063 a0001c0001t0006g0112 a0001c0001t0028g0151 a0001c0001t0001g0063 a0001c0001t0006g0112 a0001c0001t0028g0151	3	232	0.0129	16	c.-70 others(25): Show c.-706_-705insCACACACACACACACA	C1orf21	ENSG00000116667.15	transcript	ENST00000235307.7	protein_coding		241		chr1	TogoVar
C1orf21_chr1_184382029_184634019	184386789	C C	CCACACAC others(9): Show CCACACACACACACACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00741.hp1 HG01358.hp1 HG01358.hp2 others(15): Show HG00741.hp1 HG01358.hp1 HG01358.hp2 HG01516.hp1 HG01981.hp1 HG02615.hp1 HG02717.hp2 HG02896.hp1 HG03017.hp2 HG03669.hp2 HG04228.hp1 NA18954.hp2 NA18962.hp1 NA18971.hp1 NA19063.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0023 a0001c0001t0046 a0001c0001t0050 a0001c0001t0069	a0001c0001t0001g0092 a0001c0001t0001g0107 a0001c0001t0001g0115 others(15): Show a0001c0001t0001g0092 a0001c0001t0001g0107 a0001c0001t0001g0115 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0130 a0001c0001t0001g0135 a0001c0001t0001g0225 a0001c0001t0001g0229 a0001c0001t0002g0119 a0001c0001t0002g0122 a0001c0001t0002g0141 a0001c0001t0002g0227 a0001c0001t0004g0116 a0001c0001t0023g0057 a0001c0001t0046g0129 a0001c0001t0050g0081 a0001c0001t0069g0139	18	232	0.0776	16	c.-70 others(25): Show c.-704_-703insCACACACACACACACA	C1orf21	ENSG00000116667.15	transcript	ENST00000235307.7	protein_coding		239		chr1	TogoVar
C1orf21_chr1_184382029_184634019	184386819	A A	ACACACAC others(9): Show ACACACACACACACACT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0027	a0001c0001t0027g0231 a0001c0001t0027g0231	1	232	0.0043	16	c.-67 others(25): Show c.-674_-673insCACACACACACACACT	C1orf21	ENSG00000116667.15	transcript	ENST00000235307.7	protein_coding		209		chr1	TogoVar
C1orf21_chr1_184382029_184634019	184410663	A A	ATATATAT others(9): Show ATATATATATATATTTT	intron_variant intron_variant	MODIFIER	HG04228.hp2 NA18982.hp2 HG04228.hp2 NA18982.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0070 a0001c0001t0001g0071	2	232	0.0086	16	c.-12 others(37): Show c.-125+23296_-125+23297insATATATATATATTTTT	C1orf21	ENSG00000116667.15	transcript	ENST00000235307.7	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
C1orf21_chr1_184382029_184634019	184445343	C C	CCTCTCTC others(9): Show CCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	NA19063.hp2 NA19063.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0039 a0001c0001t0001g0039	1	232	0.0043	16	c.-12 others(37): Show c.-124-32027_-124-32012dupTCTCTCTCTCTCTCTC	C1orf21	ENSG00000116667.15	transcript	ENST00000235307.7	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
C1orf21_chr1_184382029_184634019	184505306	A A	AATATATA others(9): Show AATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00621.hp1 NA18940.hp2 HG00621.hp1 NA18940.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0054 a0001c0001t0004g0180 a0001c0001t0004g0054 a0001c0001t0004g0180	2	232	0.0086	16	c.95- others(31): Show c.95-2262_95-2247dupTATATATATATATATA	C1orf21	ENSG00000116667.15	transcript	ENST00000235307.7	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
C1orf21_chr1_184382029_184634019	184505338	T T	TATATATA others(9): Show TATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0163 a0001c0001t0001g0163	1	232	0.0043	16	c.95- others(31): Show c.95-2247_95-2246insTATATATATATACATA	C1orf21	ENSG00000116667.15	transcript	ENST00000235307.7	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
C1orf21_chr1_184382029_184634019	184559505	C C	CCCTTCCT others(9): Show CCCTTCCTTCCTTCCTT	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG02970.hp1 NA18940.hp1 HG00408.hp1 HG02970.hp1 NA18940.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0076 a0001c0001t0002g0219 a0001c0001t0003g0170 a0001c0001t0002g0076 a0001c0001t0002g0219 a0001c0001t0003g0170	3	232	0.0129	16	c.190 others(35): Show c.190-31198_190-31183dupTCCTTCCTTCCTTCCT	C1orf21	ENSG00000116667.15	transcript	ENST00000235307.7	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
C1orf21_chr1_184382029_184634019	184559509	T T	TCCTTCCT others(9): Show TCCTTCCTTCCTTCCCC	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02818.hp2 HG02896.hp2 others(5): Show HG01891.hp1 HG02818.hp2 HG02896.hp2 HG02897.hp1 HG02965.hp2 HG03041.hp2 HG03195.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0016 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0016 a0001c0001t0053	a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0003g0010 others(5): Show a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0003g0010 a0001c0001t0003g0011 a0001c0001t0003g0162 a0001c0001t0016g0149 a0001c0001t0016g0155 a0001c0001t0053g0156	8	232	0.0345	16	c.190 others(35): Show c.190-31216_190-31215insCCCCTTCCTTCCTTCC	C1orf21	ENSG00000116667.15	transcript	ENST00000235307.7	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
C1orf21_chr1_184382029_184634019	184559521	T T	TCCTTCCT others(9): Show TCCTTCCTTCCTTCCCC	intron_variant intron_variant	MODIFIER	NA18978.hp2 NA19011.hp2 NA18978.hp2 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0183 a0001c0001t0004g0215 a0001c0001t0004g0183 a0001c0001t0004g0215	2	232	0.0086	16	c.190 others(35): Show c.190-31204_190-31203insCCCCTTCCTTCCTTCC	C1orf21	ENSG00000116667.15	transcript	ENST00000235307.7	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
C1orf21_chr1_184382029_184634019	184630308	T T	TCACACAC others(9): Show TCACACACACACACACA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19067.hp2 NA19067.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0085 a0001c0001t0001g0085	1	232	0.0043	16	c.10 others(29): Show c.10752_*10753insCACACACACACACACA	C1orf21	ENSG00000116667.15	transcript	ENST00000235307.7	protein_coding		1290		chr1	TogoVar
C1orf50_chr1_42762249_42784491	42775762	T T	TTATATAT others(9): Show TTATATATATATATATA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01884.hp1 HG02055.hp1 HG02559.hp1 others(3): Show HG01884.hp1 HG02055.hp1 HG02559.hp1 HG02723.hp2 HG03654.hp1 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0100 a0001c0001t0101 a0001c0001t0017 a0001c0001t0100 a0001c0001t0101	a0001c0001t0017g0018 a0001c0001t0100g0075 a0001c0001t0101g0077 a0001c0001t0017g0018 a0001c0001t0100g0075 a0001c0001t0101g0077	6	418	0.0144	16	c.37 others(25): Show c.377_*392dupTATATATATATATATA	C1orf50	ENSG00000164008.17	transcript	ENST00000372525.7	protein_coding	5/5	393	INFO_REALIGN_3_PRIME	chr1	TogoVar
C1orf50_chr1_42762249_42784491	42775785	T T	TATATATA others(9): Show TATATATATATATATAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01167.hp1 NA20129.hp2 HG01167.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0031 a0001c0001t0031	a0001c0001t0031g0016 a0001c0001t0031g0016	2	418	0.0048	16	c.39 others(25): Show c.392_*393insTATATATATATATAAA	C1orf50	ENSG00000164008.17	transcript	ENST00000372525.7	protein_coding	5/5	393	INFO_REALIGN_3_PRIME	chr1	TogoVar
C1orf52_chr1_85244953_85264662	85255795	T T	TTACAGTG others(9): Show TTACAGTGGGTTTATGA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(332): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp2 HG01071.hp1 HG01074.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp2 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02056.hp1 HG02074.hp1 HG02074.hp2 HG02080.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp2 NA18939.hp1 NA18940.hp1 NA18940.hp2 NA18941.hp2 NA18944.hp1 NA18945.hp1 NA18945.hp2 NA18946.hp2 NA18947.hp1 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18971.hp1 NA18972.hp1 NA18974.hp1 NA18975.hp1 NA18975.hp2 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp2 NA18987.hp1 NA18990.hp2 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19058.hp2 NA19059.hp1 NA19059.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp2 NA19063.hp1 NA19064.hp1 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19078.hp1 NA19079.hp1 NA19079.hp2 NA19083.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0005 others(1): Show a0001c0001 a0001c0003 a0001c0005 a0002c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(29): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029 a0001c0001t0030 a0001c0003t0002 a0001c0003t0014 a0001c0003t0019 a0001c0003t0031 a0001c0005t0002 a0002c0007t0005	a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0009 others(96): Show a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0040 a0001c0001t0001g0043 a0001c0001t0001g0054 a0001c0001t0001g0058 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0064 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0080 a0001c0001t0001g0090 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0097 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0111 a0001c0001t0002g0056 a0001c0001t0002g0059 a0001c0001t0002g0095 a0001c0001t0003g0002 a0001c0001t0003g0006 a0001c0001t0003g0025 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0074 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0081 a0001c0001t0003g0112 a0001c0001t0003g0113 a0001c0001t0003g0115 a0001c0001t0004g0005 a0001c0001t0004g0018 a0001c0001t0004g0019 a0001c0001t0004g0020 a0001c0001t0004g0022 a0001c0001t0004g0023 a0001c0001t0004g0032 a0001c0001t0004g0049 a0001c0001t0004g0052 a0001c0001t0004g0053 a0001c0001t0004g0089 a0001c0001t0005g0010 a0001c0001t0005g0013 a0001c0001t0005g0063 a0001c0001t0005g0107 a0001c0001t0005g0109 a0001c0001t0006g0014 a0001c0001t0006g0110 a0001c0001t0007g0017 a0001c0001t0007g0082 a0001c0001t0007g0083 a0001c0001t0007g0087 a0001c0001t0009g0028 a0001c0001t0011g0038 a0001c0001t0012g0041 a0001c0001t0013g0039 a0001c0001t0015g0045 a0001c0001t0016g0046 a0001c0001t0017g0114 a0001c0001t0018g0096 a0001c0001t0020g0084 a0001c0001t0021g0050 a0001c0001t0022g0091 a0001c0001t0023g0057 a0001c0001t0024g0055 a0001c0001t0025g0085 a0001c0001t0026g0100 a0001c0001t0027g0051 a0001c0001t0028g0088 a0001c0001t0029g0086 a0001c0001t0030g0048 a0001c0003t0002g0008 a0001c0003t0002g0033 a0001c0003t0002g0070 a0001c0003t0002g0073 a0001c0003t0014g0037 a0001c0003t0019g0071 a0001c0003t0031g0072 a0001c0005t0002g0099 a0002c0007t0005g0121	335	438	0.7648	16	c.475 others(33): Show c.475+2728_475+2729insTCATAAACCCACTGTA	C1orf52	ENSG00000162642.14	transcript	ENST00000471115.6	protein_coding	2/2			chr1	TogoVar
C1orf87_chr1_59985394_60078770	60005770	C C	CGTGTGTG others(9): Show CGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02809.hp1 HG03195.hp1 others(2): Show HG02145.hp1 HG02809.hp1 HG03195.hp1 HG03486.hp1 NA19030.hp2	a0001 a0011 a0001 a0011	a0001c0001 a0011c0020 a0001c0001 a0011c0020	a0001c0001t0001 a0011c0020t0006 a0001c0001t0001 a0011c0020t0006	a0001c0001t0001g0212 a0001c0001t0001g0218 a0001c0001t0001g0219 others(2): Show a0001c0001t0001g0212 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0011c0020t0006g0217	5	382	0.0131	16	c.119 others(35): Show c.1192+4606_1193-4615dupACACACACACACACAC	C1orf87	ENSG00000162598.13	transcript	ENST00000371201.3	protein_coding	9/11			chr1	TogoVar
C20orf144_chr20_33657327_33668908	33660927	G G	GCCGGCAC others(9): Show GCCGGCACTGACCCCAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00621.hp1 HG02056.hp1 HG02056.hp2 others(4): Show HG00621.hp1 HG02056.hp1 HG02056.hp2 NA18941.hp2 NA18979.hp1 NA19054.hp1 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	7	386	0.0181	16	c.-14 others(27): Show c.-1419_-1418insCCGGCACTGACCCCAA	C20orf144	ENSG00000149609.6	transcript	ENST00000375222.4	protein_coding		1399		chr20	TogoVar
C20orf173_chr20_35521979_35534652	35532574	T T	TACACACA others(9): Show TACACACACACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0011 a0003c0004t0001g0011	1	366	0.0027	16	c.-30 others(27): Show c.-3068_-3067insGTGTGTGTGTGTGTGT	C20orf173	ENSG00000125975.14	transcript	ENST00000444723.3	protein_coding		2923		chr20	TogoVar
C20orf203_chr20_32626625_32678941	32628630	A A	AACACACA others(9): Show AACACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0040 a0001c0001t0040	a0001c0001t0040g0024 a0001c0001t0040g0024	1	360	0.0028	16	c.69 others(27): Show c.6939_*6940insGTGTGTGTGTGTGTGT	C20orf203	ENSG00000198547.10	transcript	ENST00000608990.6	protein_coding		2994		chr20	TogoVar

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