Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
C20orf203_chr20_32626625_32678941	32656863	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02135.hp1 HG02258.hp2 others(6): Show HG01243.hp1 HG02135.hp1 HG02258.hp2 HG02723.hp1 HG02738.hp1 HG03130.hp2 HG03831.hp1 HG04199.hp1 NA18983.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0010 a0001c0001t0001 a0001c0001t0003 a0001c0001t0010	a0001c0001t0001g0326 a0001c0001t0003g0295 a0001c0001t0003g0301 others(5): Show a0001c0001t0001g0326 a0001c0001t0003g0295 a0001c0001t0003g0301 a0001c0001t0003g0306 a0001c0001t0003g0315 a0001c0001t0010g0008 a0001c0001t0010g0180 a0001c0001t0010g0265	9	360	0.0250	16	c.-26 others(35): Show c.-263-4883_-263-4882insTTTTTTTTTTTTTTTT	C20orf203	ENSG00000198547.10	transcript	ENST00000608990.6	protein_coding	1/5			chr20	TogoVar
C20orf203_chr20_32626625_32678941	32666797	T T	TTATATAT others(9): Show TTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01993.hp1 HG03225.hp1 HG01993.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0002t0004 a0001c0001t0006 a0001c0002t0004	a0001c0001t0006g0270 a0001c0002t0004g0205 a0001c0001t0006g0270 a0001c0002t0004g0205	2	360	0.0056	16	c.-26 others(35): Show c.-264+6819_-264+6834dupTATATATATATATATA	C20orf203	ENSG00000198547.10	transcript	ENST00000608990.6	protein_coding	1/5			chr20	TogoVar
C20orf203_chr20_32626625_32678941	32666797	T T	TTTTATAT others(9): Show TTTTATATATATATATA	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01433.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0227 a0001c0001t0002g0227	1	360	0.0028	16	c.-26 others(35): Show c.-264+6834_-264+6835insTATATATATATATAAA	C20orf203	ENSG00000198547.10	transcript	ENST00000608990.6	protein_coding	1/5			chr20	TogoVar
C20orf96_chr20_265863_295750	273899	A A	AAGGGAGG others(9): Show AAGGGAGGGAGGGAGGG	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01169.hp1 HG01167.hp2 HG01169.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0224 a0001c0001t0001g0384 a0001c0001t0001g0224 a0001c0001t0001g0384	2	410	0.0049	16	c.103 others(35): Show c.1031+2068_1031+2069insCCCTCCCTCCCTCCCT	C20orf96	ENSG00000196476.12	transcript	ENST00000360321.7	protein_coding	10/10			chr20	TogoVar
C20orf96_chr20_265863_295750	273903	A A	AAGGAAGG others(9): Show AAGGAAGGGAGGGAGGG	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0230 a0001c0001t0001g0230	1	410	0.0024	16	c.103 others(35): Show c.1031+2064_1031+2065insCCCTCCCTCCCTTCCT	C20orf96	ENSG00000196476.12	transcript	ENST00000360321.7	protein_coding	10/10			chr20	TogoVar
C20orf96_chr20_265863_295750	273903	A A	AAGGGAGG others(9): Show AAGGGAGGGAGGGAGGG	intron_variant intron_variant	MODIFIER	HG02056.hp2 HG03041.hp1 HG03195.hp1 HG02056.hp2 HG03041.hp1 HG03195.hp1	a0002 a0002	a0002c0002 a0002c0007 a0002c0002 a0002c0007	a0002c0002t0001 a0002c0007t0001 a0002c0002t0001 a0002c0007t0001	a0002c0002t0001g0149 a0002c0002t0001g0268 a0002c0007t0001g0273 a0002c0002t0001g0149 a0002c0002t0001g0268 a0002c0007t0001g0273	3	410	0.0073	16	c.103 others(35): Show c.1031+2049_1031+2064dupCCCTCCCTCCCTCCCT	C20orf96	ENSG00000196476.12	transcript	ENST00000360321.7	protein_coding	10/10			chr20	TogoVar
C20orf96_chr20_265863_295750	278973	A A	ACGGAGGG others(9): Show ACGGAGGGAGGAAGGGC	intron_variant intron_variant	MODIFIER	NA20752.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0371 a0001c0001t0001g0371	1	410	0.0024	16	c.465 others(31): Show c.465+198_465+199insGCCCTTCCTCCCTCCG	C20orf96	ENSG00000196476.12	transcript	ENST00000360321.7	protein_coding	5/10			chr20	TogoVar
C20orf96_chr20_265863_295750	279094	C C	CGGAGGGA others(9): Show CGGAGGGAGGGAGGGAG	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0014 a0001c0014	a0001c0014t0001 a0001c0014t0001	a0001c0014t0001g0249 a0001c0014t0001g0249	1	410	0.0024	16	c.465 others(29): Show c.465+77_465+78insCTCCCTCCCTCCCTCC	C20orf96	ENSG00000196476.12	transcript	ENST00000360321.7	protein_coding	5/10			chr20	TogoVar
C21orf58_chr21_46296130_46328870	46298434	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp2 HG01256.hp2 HG01258.hp1 others(1): Show HG00140.hp2 HG01256.hp2 HG01258.hp1 HG02738.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0024 a0002c0002t0001 a0002c0002t0024	a0002c0002t0001g0090 a0002c0002t0001g0091 a0002c0002t0001g0149 others(1): Show a0002c0002t0001g0090 a0002c0002t0001g0091 a0002c0002t0001g0149 a0002c0002t0024g0325	4	378	0.0106	16	c.35 others(27): Show c.3564_*3565insAAAAAAAAAAAAAAAA	C21orf58	ENSG00000160298.18	transcript	ENST00000291691.12	protein_coding		2695		chr21	TogoVar
C21orf58_chr21_46296130_46328870	46303704	A A	AATATATA others(9): Show AATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0012 a0002c0002t0012	a0002c0002t0012g0075 a0002c0002t0012g0075	1	378	0.0027	16	c.722 others(33): Show c.722-1129_722-1128insATATATATATATATAT	C21orf58	ENSG00000160298.18	transcript	ENST00000291691.12	protein_coding	6/7			chr21	TogoVar
C21orf58_chr21_46296130_46328870	46303745	A A	ATATATAT others(9): Show ATATATATTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02523.hp1 HG02523.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0309 a0001c0001t0001g0309	1	378	0.0027	16	c.722 others(33): Show c.722-1170_722-1169insAAAAAAAAAATATATA	C21orf58	ENSG00000160298.18	transcript	ENST00000291691.12	protein_coding	6/7			chr21	TogoVar
C21orf58_chr21_46296130_46328870	46311938	A A	ACCATCCA others(9): Show ACCATCCACCCACCCAT	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0084 a0001c0001t0003g0084	1	378	0.0027	16	c.610 others(31): Show c.610-387_610-372dupATGGGTGGGTGGATGG	C21orf58	ENSG00000160298.18	transcript	ENST00000291691.12	protein_coding	5/7			chr21	TogoVar
C21orf58_chr21_46296130_46328870	46314131	G G	GTTTTTTT others(9): Show GTTTTTTTTTTTTTGTT	intron_variant intron_variant	MODIFIER	NA19078.hp2 NA19078.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0083 a0002c0002t0001g0083	1	378	0.0027	16	c.609 others(31): Show c.609+584_609+585insAACAAAAAAAAAAAAA	C21orf58	ENSG00000160298.18	transcript	ENST00000291691.12	protein_coding	5/7			chr21	TogoVar
C21orf62_chr21_32785673_32818703	32809275	C C	CCCTCCCT others(9): Show CCCTCCCTCCTTTCTTT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00544.hp2 HG00558.hp1 others(37): Show HG00099.hp2 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00642.hp1 HG00735.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01243.hp1 HG01256.hp1 HG01261.hp1 HG01346.hp2 HG01978.hp2 HG02004.hp2 HG02015.hp2 HG02040.hp2 HG02148.hp2 HG02165.hp1 HG02257.hp1 HG02280.hp2 HG02486.hp1 HG02572.hp1 HG02615.hp2 HG02647.hp1 HG02683.hp2 HG04115.hp2 HG04228.hp1 NA18952.hp2 NA18980.hp2 NA19005.hp2 NA20129.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0011 a0001c0001t0025 a0001c0002t0002	a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0016 others(30): Show a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0016 a0001c0001t0001g0076 a0001c0001t0001g0088 a0001c0001t0001g0093 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0153 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0166 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0181 a0001c0001t0001g0231 a0001c0001t0001g0244 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0251 a0001c0001t0003g0250 a0001c0001t0004g0011 a0001c0001t0004g0013 a0001c0001t0004g0159 a0001c0001t0004g0229 a0001c0001t0005g0073 a0001c0001t0005g0094 a0001c0001t0007g0004 a0001c0001t0011g0167 a0001c0001t0025g0180 a0001c0002t0002g0230	40	303	0.1320	16	c.-14 others(35): Show c.-140+1298_-140+1299insAAAGAAAGGAGGGAGG	C21orf62	ENSG00000205929.11	transcript	ENST00000479548.2	protein_coding	2/3			chr21	TogoVar
C21orf62_chr21_32785673_32818703	32809279	C C	CCTTCCTT others(9): Show CCTTCCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0268 a0001c0002t0002g0268	1	303	0.0033	16	c.-14 others(35): Show c.-140+1294_-140+1295insAAAGAAAGAAAGGAAG	C21orf62	ENSG00000205929.11	transcript	ENST00000479548.2	protein_coding	2/3			chr21	TogoVar
C21orf62_chr21_32785673_32818703	32809279	C C	CCTTTCTT others(9): Show CCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02055.hp2 NA18985.hp1 HG02055.hp2 NA18985.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0012 a0001c0002t0002 a0001c0002t0012	a0001c0002t0002g0037 a0001c0002t0012g0219 a0001c0002t0002g0037 a0001c0002t0012g0219	2	303	0.0066	16	c.-14 others(35): Show c.-140+1279_-140+1294dupAAAGAAAGAAAGAAAG	C21orf62	ENSG00000205929.11	transcript	ENST00000479548.2	protein_coding	2/3			chr21	TogoVar
C21orf91_chr21_17783974_17824356	17789253	T T	TAACACAC others(9): Show TAACACACACACACACA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02615.hp2 HG02818.hp2 HG03130.hp1 HG02615.hp2 HG02818.hp2 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0065 a0001c0001t0027 a0001c0001t0065	a0001c0001t0027g0053 a0001c0001t0065g0162 a0001c0001t0027g0053 a0001c0001t0065g0162	3	414	0.0073	16	c.41 others(27): Show c.4161_*4162insTGTGTGTGTGTGTGTT	C21orf91	ENSG00000154642.11	transcript	ENST00000284881.9	protein_coding	5/5	4161		chr21	TogoVar
C21orf91_chr21_17783974_17824356	17801274	G G	GTTCTTTT others(9): Show GTTCTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG02080.hp1 NA18972.hp2 others(1): Show HG00597.hp2 HG02080.hp1 NA18972.hp2 NA19067.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0006 a0001c0004t0048 a0001c0004t0006 a0001c0004t0048	a0001c0004t0006g0036 a0001c0004t0006g0090 a0001c0004t0048g0091 a0001c0004t0006g0036 a0001c0004t0006g0090 a0001c0004t0048g0091	4	414	0.0097	16	c.128 others(33): Show c.128-4157_128-4156insAAAAAAAAAAAAAGAA	C21orf91	ENSG00000154642.11	transcript	ENST00000284881.9	protein_coding	2/4			chr21	TogoVar
C22orf42_chr22_32144006_32164303	32147884	G G	GTATATAT others(9): Show GTATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00609.hp2 HG00639.hp2 HG00735.hp1 others(8): Show HG00609.hp2 HG00639.hp2 HG00735.hp1 HG01069.hp1 HG01993.hp2 HG02738.hp1 HG02976.hp2 HG03017.hp1 HG03195.hp1 HG04204.hp2 NA18522.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0004 a0002c0002t0002g0011 a0002c0002t0002g0017 others(5): Show a0002c0002t0002g0004 a0002c0002t0002g0011 a0002c0002t0002g0017 a0002c0002t0002g0022 a0002c0002t0002g0040 a0002c0002t0002g0080 a0002c0002t0002g0085 a0002c0002t0002g0090	11	398	0.0276	16	c.16 others(27): Show c.1655_*1656insTATATATATATATATA	C22orf42	ENSG00000205856.4	transcript	ENST00000382097.4	protein_coding		1121		chr22	TogoVar
C22orf42_chr22_32144006_32164303	32147902	A A	ATATATAT others(9): Show ATATATATATATATTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0014 a0002c0002t0002g0014	1	398	0.0025	16	c.16 others(27): Show c.1637_*1638insAAAATATATATATATA	C22orf42	ENSG00000205856.4	transcript	ENST00000382097.4	protein_coding		1103		chr22	TogoVar
C22orf42_chr22_32144006_32164303	32147902	A A	ATATATAT others(9): Show ATATATATATATTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01192.hp1 HG02976.hp1 HG03453.hp1 others(1): Show HG01192.hp1 HG02976.hp1 HG03453.hp1 NA19240.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0014 a0002c0002t0002g0039 a0002c0002t0002g0014 a0002c0002t0002g0039	4	398	0.0101	16	c.16 others(27): Show c.1637_*1638insAAAAAATATATATATA	C22orf42	ENSG00000205856.4	transcript	ENST00000382097.4	protein_coding		1103		chr22	TogoVar
C22orf42_chr22_32144006_32164303	32147902	A A	ATATATAT others(9): Show ATATATATATTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03491.hp2 HG03492.hp2 HG03491.hp2 HG03492.hp2	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0002 a0004c0005t0002	a0004c0005t0002g0006 a0004c0005t0002g0006	2	398	0.0050	16	c.16 others(27): Show c.1637_*1638insAAAAAAAATATATATA	C22orf42	ENSG00000205856.4	transcript	ENST00000382097.4	protein_coding		1103		chr22	TogoVar
C2CD2_chr21_41880112_41959018	41908243	T T	TTGTGTGT others(9): Show TTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG02083.hp2 HG02622.hp1 others(14): Show HG01123.hp2 HG02083.hp2 HG02622.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02809.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG03486.hp2 HG03579.hp1 HG03704.hp2 HG04184.hp1 NA18947.hp2 NA19030.hp1 NA19066.hp2	a0001 a0001	a0001c0003 a0001c0004 a0001c0006 others(2): Show a0001c0003 a0001c0004 a0001c0006 a0001c0014 a0001c0023	a0001c0003t0004 a0001c0004t0004 a0001c0004t0006 others(10): Show a0001c0003t0004 a0001c0004t0004 a0001c0004t0006 a0001c0004t0009 a0001c0004t0017 a0001c0004t0022 a0001c0006t0001 a0001c0006t0003 a0001c0006t0008 a0001c0006t0009 a0001c0006t0048 a0001c0014t0005 a0001c0023t0005	a0001c0003t0004g0109 a0001c0004t0004g0280 a0001c0004t0004g0281 others(14): Show a0001c0003t0004g0109 a0001c0004t0004g0280 a0001c0004t0004g0281 a0001c0004t0006g0392 a0001c0004t0009g0137 a0001c0004t0009g0340 a0001c0004t0017g0232 a0001c0004t0022g0391 a0001c0006t0001g0006 a0001c0006t0001g0082 a0001c0006t0003g0320 a0001c0006t0008g0387 a0001c0006t0009g0256 a0001c0006t0048g0358 a0001c0014t0005g0243 a0001c0014t0005g0251 a0001c0023t0005g0234	17	396	0.0429	16	c.101 others(33): Show c.1019-475_1019-460dupCACACACACACACACA	C2CD2	ENSG00000157617.17	transcript	ENST00000380486.4	protein_coding	8/13			chr21	TogoVar
C2CD2_chr21_41880112_41959018	41947112	T T	TTCTCTCT others(9): Show TTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG02602.hp1	a0002 a0002	a0002c0010 a0002c0010	a0002c0010t0008 a0002c0010t0008	a0002c0010t0008g0023 a0002c0010t0008g0023	1	396	0.0025	16	c.280 others(33): Show c.280-4883_280-4868dupGAGAGAGAGAGAGAGA	C2CD2	ENSG00000157617.17	transcript	ENST00000380486.4	protein_coding	1/13			chr21	TogoVar
C2CD2_chr21_41880112_41959018	41947137	T T	TCTCTCTC others(9): Show TCTCTCTCTCTCTCTCC	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG03579.hp1 HG02572.hp1 HG03579.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0017 a0001c0004t0022 a0001c0004t0017 a0001c0004t0022	a0001c0004t0017g0025 a0001c0004t0022g0391 a0001c0004t0017g0025 a0001c0004t0022g0391	2	396	0.0051	16	c.280 others(33): Show c.280-4893_280-4892insGGAGAGAGAGAGAGAG	C2CD2	ENSG00000157617.17	transcript	ENST00000380486.4	protein_coding	1/13			chr21	TogoVar
C2CD2_chr21_41880112_41959018	41948870	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01433.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0290 a0001c0001t0003g0290	1	396	0.0025	16	c.279 others(33): Show c.279+4484_279+4499dupAAAAAAAAAAAAAAAA	C2CD2	ENSG00000157617.17	transcript	ENST00000380486.4	protein_coding	1/13			chr21	TogoVar
C2CD3_chr11_74007718_74176002	74014519	G G	GGCCCAGC others(9): Show GGCCCAGCGAGAGTTGC	intron_variant intron_variant	MODIFIER	HG03942.hp1 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0191 a0001c0001t0001g0191	1	318	0.0031	16	c.692 others(34): Show c.6922-1010_6922-995dupGCAACTCTCGCTGGGC	C2CD3	ENSG00000168014.18	transcript	ENST00000334126.12	protein_coding	32/32			chr11	TogoVar
C2CD3_chr11_74007718_74176002	74107322	T T	TCTCACAC others(9): Show TCTCACACACACACACA	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG03516.hp1 HG02572.hp1 HG03516.hp1	a0006 a0006	a0006c0008 a0006c0012 a0006c0008 a0006c0012	a0006c0008t0001 a0006c0012t0001 a0006c0008t0001 a0006c0012t0001	a0006c0008t0001g0230 a0006c0012t0001g0234 a0006c0008t0001g0230 a0006c0012t0001g0234	2	318	0.0063	16	c.196 others(33): Show c.1963-830_1963-829insTGTGTGTGTGTGTGAG	C2CD3	ENSG00000168014.18	transcript	ENST00000334126.12	protein_coding	12/32			chr11	TogoVar
C2CD3_chr11_74007718_74176002	74109964	C C	CTTGGGAG others(9): Show CTTGGGAGCTACTTGGG	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG04228.hp2 HG06807.hp1 others(5): Show HG02280.hp2 HG04228.hp2 HG06807.hp1 NA18522.hp1 NA18943.hp2 NA18984.hp2 NA18999.hp2 NA19003.hp2	a0009 a0026 a0036 a0009 a0026 a0036	a0009c0010 a0026c0025 a0036c0042 a0009c0010 a0026c0025 a0036c0042	a0009c0010t0001 a0026c0025t0001 a0036c0042t0001 a0009c0010t0001 a0026c0025t0001 a0036c0042t0001	a0009c0010t0001g0303 a0009c0010t0001g0304 a0009c0010t0001g0305 others(5): Show a0009c0010t0001g0303 a0009c0010t0001g0304 a0009c0010t0001g0305 a0009c0010t0001g0306 a0009c0010t0001g0307 a0009c0010t0001g0308 a0026c0025t0001g0222 a0036c0042t0001g0302	8	318	0.0252	16	c.184 others(33): Show c.1844-813_1844-812insCCCAAGTAGCTCCCAA	C2CD3	ENSG00000168014.18	transcript	ENST00000334126.12	protein_coding	11/32			chr11	TogoVar
C2CD3_chr11_74007718_74176002	74117361	A A	AATATATA others(9): Show AATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG02809.hp1 NA18963.hp1 HG00280.hp2 HG02809.hp1 NA18963.hp1	a0002 a0008 a0002 a0008	a0002c0003 a0008c0007 a0002c0003 a0008c0007	a0002c0003t0001 a0008c0007t0001 a0002c0003t0001 a0008c0007t0001	a0002c0003t0001g0056 a0002c0003t0001g0205 a0008c0007t0001g0211 a0002c0003t0001g0056 a0002c0003t0001g0205 a0008c0007t0001g0211	3	318	0.0094	16	c.152 others(33): Show c.1520+851_1520+866dupATATATATATATATAT	C2CD3	ENSG00000168014.18	transcript	ENST00000334126.12	protein_coding	9/32			chr11	TogoVar
C2CD3_chr11_74007718_74176002	74146710	C C	CCACACAC others(9): Show CCACACACACATACACA	intron_variant intron_variant	MODIFIER	HG02015.hp2 HG02886.hp2 NA18970.hp2 others(1): Show HG02015.hp2 HG02886.hp2 NA18970.hp2 NA20300.hp2	a0003 a0023 a0033 a0003 a0023 a0033	a0003c0002 a0003c0016 a0023c0037 others(1): Show a0003c0002 a0003c0016 a0023c0037 a0033c0022	a0003c0002t0001 a0003c0016t0001 a0023c0037t0001 others(1): Show a0003c0002t0001 a0003c0016t0001 a0023c0037t0001 a0033c0022t0001	a0003c0002t0001g0275 a0003c0016t0001g0242 a0023c0037t0001g0276 others(1): Show a0003c0002t0001g0275 a0003c0016t0001g0242 a0023c0037t0001g0276 a0033c0022t0001g0295	4	318	0.0126	16	c.484 others(33): Show c.484-6883_484-6882insTGTGTATGTGTGTGTG	C2CD3	ENSG00000168014.18	transcript	ENST00000334126.12	protein_coding	3/32			chr11	TogoVar
C2CD3_chr11_74007718_74176002	74146747	C C	CACACACA others(9): Show CACACACACACACACAT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01361.hp2 HG02015.hp1 others(7): Show HG00280.hp2 HG01361.hp2 HG02015.hp1 HG02132.hp1 HG02735.hp1 HG03486.hp1 NA18966.hp1 NA18980.hp1 NA18982.hp1 NA19009.hp2	a0002 a0005 a0002 a0005	a0002c0003 a0002c0005 a0005c0027 a0002c0003 a0002c0005 a0005c0027	a0002c0003t0001 a0002c0005t0001 a0005c0027t0001 a0002c0003t0001 a0002c0005t0001 a0005c0027t0001	a0002c0003t0001g0070 a0002c0003t0001g0071 a0002c0003t0001g0202 others(7): Show a0002c0003t0001g0070 a0002c0003t0001g0071 a0002c0003t0001g0202 a0002c0003t0001g0205 a0002c0003t0001g0206 a0002c0005t0001g0064 a0002c0005t0001g0069 a0002c0005t0001g0085 a0002c0005t0001g0086 a0005c0027t0001g0012	10	318	0.0315	16	c.484 others(33): Show c.484-6920_484-6919insATGTGTGTGTGTGTGT	C2CD3	ENSG00000168014.18	transcript	ENST00000334126.12	protein_coding	3/32			chr11	TogoVar
C2CD3_chr11_74007718_74176002	74151305	C C	CTTTATTT others(9): Show CTTTATTTATTTATTTA	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0022 a0022	a0022c0035 a0022c0035	a0022c0035t0001 a0022c0035t0001	a0022c0035t0001g0228 a0022c0035t0001g0228	1	318	0.0031	16	c.483 others(35): Show c.483+10078_483+10093dupTAAATAAATAAATAAA	C2CD3	ENSG00000168014.18	transcript	ENST00000334126.12	protein_coding	3/32			chr11	TogoVar
C2CD6_chr2_201482421_201624178	201541531	T T	TTATATAT others(9): Show TTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0032 a0032	a0032c0037 a0032c0037	a0032c0037t0001 a0032c0037t0001	a0032c0037t0001g0265 a0032c0037t0001g0265	1	270	0.0037	16	c.116 others(35): Show c.1162+3996_1162+4011dupTATATATATATATATA	C2CD6	ENSG00000155754.15	transcript	ENST00000439140.6	protein_coding	11/15			chr2	TogoVar
C2CD6_chr2_201482421_201624178	201581477	A A	AATATATA others(9): Show AATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0029 a0029	a0029c0020 a0029c0020	a0029c0020t0001 a0029c0020t0001	a0029c0020t0001g0015 a0029c0020t0001g0015	1	270	0.0037	16	c.639 others(31): Show c.639+602_639+617dupATATATATATATATAT	C2CD6	ENSG00000155754.15	transcript	ENST00000439140.6	protein_coding	5/15			chr2	TogoVar
C2orf15_chr2_99136707_99156669	99141557	G G	GCGCAGGC others(9): Show GCGCAGGCGCACGCCCA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00408.hp2 others(181): Show HG00099.hp1 HG00099.hp2 HG00408.hp2 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp2 HG01074.hp1 HG01074.hp2 HG01099.hp2 HG01106.hp1 HG01109.hp2 HG01123.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01175.hp2 HG01192.hp2 HG01243.hp2 HG01256.hp2 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01934.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG02027.hp2 HG02040.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp1 HG02132.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp2 HG02273.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02602.hp1 HG02602.hp2 HG02683.hp1 HG02698.hp2 HG02723.hp2 HG02735.hp1 HG02738.hp2 HG02886.hp2 HG02965.hp2 HG02970.hp2 HG02976.hp1 HG03017.hp2 HG03041.hp1 HG03139.hp1 HG03209.hp2 HG03453.hp2 HG03490.hp1 HG03491.hp1 HG03579.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03927.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18612.hp2 NA18747.hp1 NA18939.hp1 NA18940.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18944.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18948.hp1 NA18949.hp2 NA18950.hp2 NA18951.hp2 NA18952.hp1 NA18955.hp2 NA18957.hp2 NA18959.hp2 NA18960.hp2 NA18963.hp1 NA18964.hp1 NA18971.hp1 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18978.hp2 NA18979.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18986.hp2 NA18988.hp1 NA18990.hp1 NA18992.hp1 NA18993.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19010.hp2 NA19011.hp2 NA19030.hp2 NA19054.hp2 NA19062.hp1 NA19062.hp2 NA19066.hp1 NA19068.hp2 NA19070.hp1 NA19074.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp2 NA19081.hp1 NA19083.hp1 NA19083.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp2 NA19087.hp1 NA19088.hp1 NA19089.hp2 NA19090.hp2 NA19091.hp2 NA19240.hp2 NA20129.hp1 NA20752.hp2 NA20805.hp2 NA20905.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0008 others(4): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0008 a0001c0001t0013 a0001c0001t0014 a0001c0001t0016 a0001c0001t0021	a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0006 others(76): Show a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0021 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0006g0088 a0001c0001t0008g0015 a0001c0001t0008g0068 a0001c0001t0008g0096 a0001c0001t0008g0100 a0001c0001t0013g0002 a0001c0001t0014g0002 a0001c0001t0016g0002 a0001c0001t0021g0065	184	414	0.4444	16	c.-66 others(25): Show c.-666_-665insCGCAGGCGCACGCCCA	C2orf15	ENSG00000273045.7	transcript	ENST00000650052.2	protein_coding		149		chr2	TogoVar
C2orf16_chr2_27532386_27587722	27539749	A A	ACCCCCCC others(9): Show ACCCCCCCCCCCCCCCC	intron_variant intron_variant	MODIFIER	HG02300.hp1 HG02300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0042 a0001c0001t0001g0042	1	326	0.0031	16	c.144 others(33): Show c.144+2187_144+2188insCCCCCCCCCCCCCCCC	C2orf16	ENSG00000221843.6	transcript	ENST00000447166.3	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr2	TogoVar
C2orf42_chr2_70144885_70196019	70154414	T T	TAAAAAAA others(9): Show TAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0320 a0001c0001t0001g0320	1	346	0.0029	16	c.151 others(35): Show c.1517-3866_1517-3851dupTTTTTTTTTTTTTTTT	C2orf42	ENSG00000115998.8	transcript	ENST00000264434.7	protein_coding	9/9			chr2	TogoVar
C2orf50_chr2_11128128_11156317	11132997	T T	TCACACAC others(9): Show TCACACACACACACACA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19000.hp1 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0144 a0001c0001t0002g0144	1	380	0.0026	16	c.-33 others(25): Show c.-338_-337insCACACACACACACACA	C2orf50	ENSG00000150873.12	transcript	ENST00000381585.8	protein_coding		130		chr2	TogoVar
C2orf50_chr2_11128128_11156317	11133310	G G	GCACACAC others(9): Show GCACACACACACACACA	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00639.hp2 HG02257.hp2 HG02965.hp1 others(5): Show HG00639.hp2 HG02257.hp2 HG02965.hp1 HG03041.hp2 HG03225.hp2 HG03471.hp1 NA19030.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0048 a0001c0001t0007 a0001c0001t0048	a0001c0001t0007g0010 a0001c0001t0007g0037 a0001c0001t0007g0038 others(5): Show a0001c0001t0007g0010 a0001c0001t0007g0037 a0001c0001t0007g0038 a0001c0001t0007g0183 a0001c0001t0007g0185 a0001c0001t0007g0199 a0001c0001t0007g0204 a0001c0001t0048g0192	8	380	0.0211	16	c.-23 others(22): Show c.-23_-8dupACACACACACACACAC	C2orf50	ENSG00000150873.12	transcript	ENST00000381585.8	protein_coding	1/3	7	INFO_REALIGN_3_PRIME	chr2	TogoVar
C2orf50_chr2_11128128_11156317	11140086	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02976.hp2 HG00639.hp1 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0023	a0001c0001t0023g0130 a0001c0001t0023g0131 a0001c0001t0023g0130 a0001c0001t0023g0131	2	380	0.0053	16	c.258 others(31): Show c.258-420_258-405dupAAAAAAAAAAAAAAAA	C2orf50	ENSG00000150873.12	transcript	ENST00000381585.8	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr2	TogoVar
C2orf69_chr2_199906293_199933273	199922031	T T	TTATATAT others(9): Show TTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG01175.hp2 HG01361.hp1 others(27): Show HG00621.hp2 HG01175.hp2 HG01361.hp1 HG01981.hp2 HG01993.hp1 HG02056.hp1 HG02074.hp2 HG02622.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02809.hp1 HG02896.hp1 HG03209.hp1 HG03704.hp1 NA18522.hp1 NA18939.hp2 NA18957.hp2 NA18984.hp1 NA18986.hp1 NA18991.hp1 NA18998.hp2 NA19002.hp2 NA19070.hp2 NA19078.hp2 NA19080.hp1 NA19084.hp2 NA19088.hp2 NA19240.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0008 a0001c0001t0012 a0001c0001t0013 a0001c0001t0028 a0001c0001t0029 a0001c0002t0002	a0001c0001t0001g0008 a0001c0001t0001g0044 a0001c0001t0001g0102 others(17): Show a0001c0001t0001g0008 a0001c0001t0001g0044 a0001c0001t0001g0102 a0001c0001t0001g0113 a0001c0001t0001g0116 a0001c0001t0001g0121 a0001c0001t0001g0132 a0001c0001t0001g0142 a0001c0001t0001g0242 a0001c0001t0002g0249 a0001c0001t0005g0007 a0001c0001t0005g0050 a0001c0001t0005g0134 a0001c0001t0008g0123 a0001c0001t0008g0220 a0001c0001t0012g0044 a0001c0001t0013g0215 a0001c0001t0028g0222 a0001c0001t0029g0007 a0001c0002t0002g0082	30	412	0.0728	16	c.334 others(33): Show c.334-3023_334-3008dupATATATATATATATAT	C2orf69	ENSG00000178074.6	transcript	ENST00000319974.6	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
C2orf72_chr2_231032523_231054719	231044945	T T	TTATATAT others(9): Show TTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00323.hp1 HG01070.hp1 others(20): Show HG00140.hp1 HG00323.hp1 HG01070.hp1 HG01071.hp1 HG01168.hp2 HG01169.hp1 HG01515.hp2 HG01517.hp1 HG01981.hp2 HG02129.hp2 HG02148.hp1 HG02155.hp2 HG02258.hp2 HG02622.hp2 HG03225.hp1 HG04184.hp1 HG04228.hp1 NA18951.hp1 NA18965.hp1 NA18977.hp2 NA18990.hp2 NA19005.hp1 NA19005.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0003 a0002c0001t0010 a0002c0001t0020 others(1): Show a0002c0001t0003 a0002c0001t0010 a0002c0001t0020 a0002c0001t0033	a0002c0001t0003g0009 a0002c0001t0003g0010 a0002c0001t0003g0015 others(9): Show a0002c0001t0003g0009 a0002c0001t0003g0010 a0002c0001t0003g0015 a0002c0001t0003g0040 a0002c0001t0003g0077 a0002c0001t0003g0078 a0002c0001t0003g0079 a0002c0001t0003g0084 a0002c0001t0003g0085 a0002c0001t0010g0015 a0002c0001t0020g0076 a0002c0001t0033g0095	23	460	0.0500	16	c.749 others(33): Show c.749-1934_749-1919dupTATATATATATATATA	C2orf72	ENSG00000204128.6	transcript	ENST00000373640.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr2	TogoVar
C2orf76_chr2_119297225_119371834	119301076	A A	AACACACA others(9): Show AACACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0212 a0001c0001t0001g0212	1	354	0.0028	16	c.13 others(27): Show c.1395_*1396insGTGTGTGTGTGTGTGT	C2orf76	ENSG00000186132.15	transcript	ENST00000334816.12	protein_coding		1148		chr2	TogoVar
C2orf76_chr2_119297225_119371834	119301104	C C	CACACACA others(9): Show CACACACACACACACAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02523.hp2 HG02523.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0037 a0001c0001t0001g0037	1	354	0.0028	16	c.13 others(27): Show c.1367_*1368insTTGTGTGTGTGTGTGT	C2orf76	ENSG00000186132.15	transcript	ENST00000334816.12	protein_coding		1120		chr2	TogoVar
C2orf80_chr2_208160347_208195030	208169269	T T	TTGTGTGT others(9): Show TTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00408.hp1 HG00408.hp2 others(43): Show HG00099.hp1 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00621.hp2 HG01123.hp2 HG01361.hp1 HG01496.hp2 HG01884.hp1 HG01884.hp2 HG01928.hp2 HG01993.hp2 HG02027.hp1 HG02040.hp1 HG02083.hp1 HG02155.hp1 HG02486.hp2 HG02615.hp2 HG02622.hp2 HG02717.hp1 HG02738.hp1 HG02886.hp1 HG02895.hp2 HG02896.hp2 HG02922.hp2 HG03041.hp1 HG03471.hp1 HG03654.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp2 HG06807.hp2 NA18962.hp1 NA18962.hp2 NA18984.hp2 NA19054.hp2 NA19056.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007	a0001c0001t0001g0053 a0001c0001t0001g0113 a0001c0001t0001g0156 others(43): Show a0001c0001t0001g0053 a0001c0001t0001g0113 a0001c0001t0001g0156 a0001c0001t0001g0176 a0001c0001t0001g0184 a0001c0001t0001g0187 a0001c0001t0001g0199 a0001c0001t0001g0201 a0001c0001t0001g0212 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0223 a0001c0001t0001g0225 a0001c0001t0001g0253 a0001c0001t0001g0277 a0001c0001t0001g0296 a0001c0001t0001g0312 a0001c0001t0001g0315 a0001c0001t0001g0318 a0001c0001t0002g0033 a0001c0001t0002g0034 a0001c0001t0002g0061 a0001c0001t0002g0097 a0001c0001t0002g0171 a0001c0001t0002g0195 a0001c0001t0002g0217 a0001c0001t0002g0230 a0001c0001t0002g0233 a0001c0001t0002g0234 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0003g0101 a0001c0001t0003g0138 a0001c0001t0003g0139 a0001c0001t0003g0140 a0001c0001t0003g0141 a0001c0001t0003g0146 a0001c0001t0003g0200 a0001c0001t0003g0210 a0001c0001t0003g0246 a0001c0001t0003g0261 a0001c0001t0003g0265 a0001c0001t0003g0268 a0001c0001t0003g0306 a0001c0001t0007g0280	46	342	0.1345	16	c.573 others(33): Show c.573+1660_573+1675dupCACACACACACACACA	C2orf80	ENSG00000188674.11	transcript	ENST00000341287.9	protein_coding	8/8			chr2	TogoVar
C2orf80_chr2_208160347_208195030	208186114	T T	TCACATAT others(9): Show TCACATATATGTGCATA	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01074.hp2 HG01106.hp1 others(18): Show HG00280.hp1 HG01074.hp2 HG01106.hp1 HG01175.hp1 HG01261.hp2 HG01516.hp1 HG02074.hp1 HG02129.hp2 HG02523.hp2 HG02683.hp1 HG03017.hp1 HG03491.hp1 HG03492.hp2 HG03710.hp1 HG03927.hp1 HG04204.hp2 HG04228.hp2 NA18974.hp2 NA18991.hp1 NA18999.hp2 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0282 a0001c0001t0001g0284 a0001c0001t0001g0288 others(17): Show a0001c0001t0001g0282 a0001c0001t0001g0284 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0296 a0001c0001t0001g0300 a0001c0001t0002g0013 a0001c0001t0002g0283 a0001c0001t0002g0295 a0001c0001t0002g0297 a0001c0001t0003g0285 a0001c0001t0003g0286 a0001c0001t0003g0287 a0001c0001t0003g0298 a0001c0001t0003g0299	21	342	0.0614	16	c.41+ others(29): Show c.41+816_41+831dupTATGCACATATATGTG	C2orf80	ENSG00000188674.11	transcript	ENST00000341287.9	protein_coding	2/8			chr2	TogoVar
C2orf88_chr2_190175863_190208484	190192452	C C	CTGTGTGT others(9): Show CTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02615.hp1 NA21309.hp2 HG02615.hp1 NA21309.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0114 a0002c0002t0002g0123 a0002c0002t0002g0114 a0002c0002t0002g0123	2	420	0.0048	16	c.-16 others(35): Show c.-164-7221_-164-7206dupGTGTGTGTGTGTGTGT	C2orf88	ENSG00000187699.10	transcript	ENST00000340623.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
C2orf88_chr2_190175863_190208484	190194477	T T	TACACACA others(9): Show TACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG04228.hp1 HG04228.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0295 a0002c0002t0002g0295	1	420	0.0024	16	c.-16 others(35): Show c.-164-5193_-164-5178dupACACACACACACACAC	C2orf88	ENSG00000187699.10	transcript	ENST00000340623.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
C2orf92_chr2_97664713_97708066	97705958	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp1 HG03579.hp1 HG03130.hp1 HG03579.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0018 a0004c0004t0001g0080 a0004c0004t0001g0018 a0004c0004t0001g0080	2	310	0.0065	16	c.31 others(27): Show c.3157_*3158insTTTTTTTTTTTTTTTT	C2orf92	ENSG00000228486.11	transcript	ENST00000627399.4	protein_coding		2893		chr2	TogoVar

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