view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LRRC8D_chr1_89816032_89941611 | 89860785 | A | ATATATAT others(10): Show |
intron_variant | MODIFIER | NA18952.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0198 | 1 | 210 | 0.0048 | 17 | c.-3+ others(34): Show |
LRRC8D | ENSG00000171492.14 | transcript | ENST00000337338.9 | protein_coding | 2/2 | chr1 | TogoVar | |||||||
LRRC9_chr14_59915144_60071817 | 60067740 | A | ATATATAT others(10): Show |
downstream_gene_variant | MODIFIER | HG00621.hp1 HG00621.hp2 |
a0001 | a0001c0001 | a0001c0001t0016 | a0001c0001t0016g0051 a0001c0001t0016g0206 |
2 | 322 | 0.0062 | 17 | c.*43 others(28): Show |
LRRC9 | ENSG00000131951.12 | transcript | ENST00000570145.2 | protein_coding | 924 | chr14 | TogoVar | |||||||
LRRC9_chr14_59915144_60071817 | 60067761 | A | ATATATAT others(10): Show |
downstream_gene_variant | MODIFIER | HG01169.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0262 | 1 | 322 | 0.0031 | 17 | c.*43 others(28): Show |
LRRC9 | ENSG00000131951.12 | transcript | ENST00000570145.2 | protein_coding | 945 | chr14 | TogoVar | |||||||
LRRD1_chr7_92139842_92184142 | 92167876 | C | CAAAAAAA others(10): Show |
intron_variant | MODIFIER | HG02895.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0247 | 1 | 360 | 0.0028 | 17 | c.-74 others(34): Show |
LRRD1 | ENSG00000240720.10 | transcript | ENST00000458448.6 | protein_coding | 1/5 | chr7 | TogoVar | |||||||
LRRD1_chr7_92139842_92184142 | 92174509 | A | ATATATAT others(10): Show |
intron_variant | MODIFIER | HG00735.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0058 | 1 | 360 | 0.0028 | 17 | c.-75 others(34): Show |
LRRD1 | ENSG00000240720.10 | transcript | ENST00000458448.6 | protein_coding | 1/5 | chr7 | TogoVar | |||||||
LRRFIP1_chr2_237622587_237786643 | 237681678 | C | CTTTTTTT others(10): Show |
intron_variant | MODIFIER | HG00642.hp1 HG01123.hp1 HG01123.hp2 others(26): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(9): Show | a0001c0001t0001g0030 a0001c0001t0001g0053 a0001c0001t0001g0065 others(26): Show |
29 | 276 | 0.1051 | 17 | c.97- others(34): Show |
LRRFIP1 | ENSG00000124831.20 | transcript | ENST00000308482.14 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
LRRFIP1_chr2_237622587_237786643 | 237729449 | A | AAGTAACA others(10): Show |
intron_variant | MODIFIER | HG00621.hp2 HG01081.hp2 HG01099.hp1 others(52): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(24): Show | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(52): Show |
55 | 276 | 0.1993 | 17 | c.444 others(34): Show |
LRRFIP1 | ENSG00000124831.20 | transcript | ENST00000308482.14 | protein_coding | 8/23 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
LRRFIP2_chr3_37047626_37179582 | 37071474 | C | CGAGCCTT others(10): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00544.hp2 HG00639.hp2 others(87): Show |
a0001a0003a0004others(3): Show | a0001c0001a0001c0002a0001c0012others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0062 a0001c0001t0002g0001 a0001c0001t0002g0026 others(86): Show |
90 | 268 | 0.3358 | 17 | c.146 others(36): Show |
LRRFIP2 | ENSG00000093167.18 | transcript | ENST00000336686.9 | protein_coding | 21/27 | chr3 | TogoVar | |||||||
LRRFIP2_chr3_37047626_37179582 | 37169818 | G | GAAAAAGA others(10): Show |
intron_variant | MODIFIER | HG01106.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0092 | 1 | 268 | 0.0037 | 17 | c.-56 others(34): Show |
LRRFIP2 | ENSG00000093167.18 | transcript | ENST00000336686.9 | protein_coding | 1/27 | chr3 | TogoVar | |||||||
LRRIQ1_chr12_85031351_85250105 | 85174701 | C | CAAAAAAA others(10): Show |
intron_variant | MODIFIER | HG02895.hp1 HG02897.hp1 NA18981.hp1 others(1): Show |
a0001a0002a0008 | a0001c0001a0002c0003a0008c0012 | a0001c0001t0001a0002c0003t0001a0008c0012t0001 | a0001c0001t0001g0216 a0001c0001t0001g0217 a0002c0003t0001g0194 others(1): Show |
4 | 228 | 0.0175 | 17 | c.482 others(38): Show |
LRRIQ1 | ENSG00000133640.20 | transcript | ENST00000393217.7 | protein_coding | 24/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
LRRIQ3_chr1_74021015_74203176 | 74022362 | C | CAAAAAAA others(10): Show |
downstream_gene_variant | MODIFIER | HG01257.hp2 HG03704.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0223 a0001c0001t0001g0225 |
2 | 274 | 0.0073 | 17 | c.*44 others(28): Show |
LRRIQ3 | ENSG00000162620.16 | transcript | ENST00000354431.9 | protein_coding | 3652 | chr1 | TogoVar | |||||||
LRRIQ4_chr3_169807870_169842773 | 169830377 | G | GAAAAAAA others(10): Show |
intron_variant | MODIFIER | HG02148.hp1 HG02300.hp2 NA18949.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0207 a0001c0001t0001g0247 a0001c0001t0001g0254 others(1): Show |
4 | 386 | 0.0104 | 17 | c.119 others(32): Show |
LRRIQ4 | ENSG00000188306.7 | transcript | ENST00000340806.7 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
LRRK1_chr15_100914357_101083257 | 100956455 | C | CTTTTTCT others(10): Show |
intron_variant | MODIFIER | HG01167.hp1 HG01169.hp2 HG01891.hp1 others(11): Show |
a0001a0002a0004others(1): Show | a0001c0008a0001c0010a0001c0016others(9): Show | a0001c0008t0030a0001c0010t0207a0001c0010t0260others(10): Show | a0001c0008t0030g0324 a0001c0010t0207g0115 a0001c0010t0260g0121 others(11): Show |
14 | 338 | 0.0414 | 17 | c.98- others(34): Show |
LRRK1 | ENSG00000154237.13 | transcript | ENST00000388948.8 | protein_coding | 2/33 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
LRRK1_chr15_100914357_101083257 | 100956455 | C | CTTTTTCT others(10): Show |
intron_variant | MODIFIER | HG01243.hp1 HG02109.hp1 HG02258.hp2 others(20): Show |
a0001a0002a0003others(3): Show | a0001c0010a0001c0011a0001c0013others(13): Show | a0001c0010t0204a0001c0010t0211a0001c0011t0016others(19): Show | a0001c0010t0204g0011 a0001c0010t0211g0017 a0001c0011t0016g0093 others(20): Show |
23 | 338 | 0.0681 | 17 | c.98- others(34): Show |
LRRK1 | ENSG00000154237.13 | transcript | ENST00000388948.8 | protein_coding | 2/33 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
LRRK2_chr12_40219997_40374285 | 40242804 | C | CAAAAAAA others(10): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(135): Show |
a0001a0002a0003others(12): Show | a0001c0002a0001c0003a0001c0005others(30): Show | a0001c0002t0002a0001c0002t0007a0001c0002t0011others(40): Show | a0001c0002t0002g0036 a0001c0002t0002g0070 a0001c0002t0002g0091 others(134): Show |
138 | 382 | 0.3613 | 17 | c.707 others(32): Show |
LRRK2 | ENSG00000188906.17 | transcript | ENST00000298910.12 | protein_coding | 6/50 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
LRRN2_chr1_204612170_204690738 | 204631256 | C | CAATCTAA others(10): Show |
intron_variant | MODIFIER | HG01081.hp1 HG01081.hp2 HG01109.hp1 others(2): Show |
a0001a0003 | a0001c0002a0003c0004 | a0001c0002t0002a0001c0002t0004a0003c0004t0002 | a0001c0002t0002g0009 a0001c0002t0002g0021 a0001c0002t0004g0024 others(2): Show |
5 | 328 | 0.0152 | 17 | c.-22 others(38): Show |
LRRN2 | ENSG00000170382.12 | transcript | ENST00000367177.4 | protein_coding | 1/1 | chr1 | TogoVar | |||||||
LRRN2_chr1_204612170_204690738 | 204652263 | C | CCCCCCCC others(10): Show |
intron_variant | MODIFIER | HG02809.hp2 | a0001 | a0001c0001 | a0001c0001t0013 | a0001c0001t0013g0327 | 1 | 328 | 0.0031 | 17 | c.-22 others(38): Show |
LRRN2 | ENSG00000170382.12 | transcript | ENST00000367177.4 | protein_coding | 1/1 | chr1 | TogoVar | |||||||
LRRTM1_chr2_80296878_80309752 | 80306400 | T | TTTTCTTT others(10): Show |
upstream_gene_variant | MODIFIER | HG03831.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0002 | 1 | 418 | 0.0024 | 17 | c.-23 others(28): Show |
LRRTM1 | ENSG00000162951.11 | transcript | ENST00000295057.4 | protein_coding | 1649 | chr2 | TogoVar | |||||||
LRRTM3_chr10_66921036_67106551 | 66996649 | C | CAAAAAAA others(10): Show |
intron_variant | MODIFIER | HG02723.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0285 | 1 | 294 | 0.0034 | 17 | c.153 others(38): Show |
LRRTM3 | ENSG00000198739.11 | transcript | ENST00000361320.5 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
LRRTM3_chr10_66921036_67106551 | 67005682 | C | CTTTTTTT others(10): Show |
intron_variant | MODIFIER | HG01070.hp2 HG01074.hp1 HG01175.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0152 a0001c0001t0001g0238 a0001c0001t0001g0280 others(4): Show |
7 | 294 | 0.0238 | 17 | c.153 others(38): Show |
LRRTM3 | ENSG00000198739.11 | transcript | ENST00000361320.5 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
LRRTM3_chr10_66921036_67106551 | 67005687 | T | TTTTTTTT others(10): Show |
intron_variant | MODIFIER | HG02809.hp2 NA20300.hp1 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0023a0001c0003t0011 | a0001c0001t0023g0266 a0001c0003t0011g0289 |
2 | 294 | 0.0068 | 17 | c.153 others(38): Show |
LRRTM3 | ENSG00000198739.11 | transcript | ENST00000361320.5 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
LRRTM4_chr2_76742685_77527376 | 76889812 | T | TAGAGAGA others(10): Show |
intron_variant | MODIFIER | HG03486.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0085 | 1 | 128 | 0.0078 | 17 | c.155 others(40): Show |
LRRTM4 | ENSG00000176204.14 | transcript | ENST00000409884.6 | protein_coding | 3/3 | chr2 | TogoVar | |||||||
LRRTM4_chr2_76742685_77527376 | 76913543 | A | ATTTTTTT others(10): Show |
intron_variant | MODIFIER | HG02630.hp2 HG03098.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0004 a0001c0001t0001g0099 |
2 | 128 | 0.0156 | 17 | c.155 others(40): Show |
LRRTM4 | ENSG00000176204.14 | transcript | ENST00000409884.6 | protein_coding | 3/3 | chr2 | TogoVar | |||||||
LRRTM4_chr2_76742685_77527376 | 77075914 | C | CAAAAAAA others(10): Show |
intron_variant | MODIFIER | HG04204.hp1 HG04204.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0006 a0001c0001t0002g0079 |
2 | 128 | 0.0156 | 17 | c.155 others(40): Show |
LRRTM4 | ENSG00000176204.14 | transcript | ENST00000409884.6 | protein_coding | 3/3 | chr2 | TogoVar | |||||||
LRRTM4_chr2_76742685_77527376 | 77306897 | A | ATTTTTTT others(10): Show |
intron_variant | MODIFIER | HG01243.hp1 HG02809.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0008 a0001c0001t0002g0081 |
2 | 128 | 0.0156 | 17 | c.155 others(40): Show |
LRRTM4 | ENSG00000176204.14 | transcript | ENST00000409884.6 | protein_coding | 3/3 | chr2 | TogoVar | |||||||
LRRTM4_chr2_76742685_77527376 | 77321587 | G | GAAAAGAA others(10): Show |
intron_variant | MODIFIER | NA19043.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0125 | 1 | 128 | 0.0078 | 17 | c.155 others(40): Show |
LRRTM4 | ENSG00000176204.14 | transcript | ENST00000409884.6 | protein_coding | 3/3 | chr2 | TogoVar | |||||||
LRRTM4_chr2_76742685_77527376 | 77362117 | G | GAAAGAAA others(10): Show |
intron_variant | MODIFIER | HG04199.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0087 | 1 | 128 | 0.0078 | 17 | c.155 others(40): Show |
LRRTM4 | ENSG00000176204.14 | transcript | ENST00000409884.6 | protein_coding | 3/3 | chr2 | TogoVar | |||||||
LRSAM1_chr9_127446510_127508499 | 127466504 | A | ATATATAT others(10): Show |
intron_variant | MODIFIER | HG03516.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0027 | 1 | 340 | 0.0029 | 17 | c.529 others(34): Show |
LRSAM1 | ENSG00000148356.15 | transcript | ENST00000300417.11 | protein_coding | 9/25 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
LRSAM1_chr9_127446510_127508499 | 127466504 | A | ATATATAT others(10): Show |
intron_variant | MODIFIER | HG02572.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0062 | 1 | 340 | 0.0029 | 17 | c.529 others(34): Show |
LRSAM1 | ENSG00000148356.15 | transcript | ENST00000300417.11 | protein_coding | 9/25 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
LRSAM1_chr9_127446510_127508499 | 127466504 | A | ATATATAT others(10): Show |
intron_variant | MODIFIER | HG03834.hp2 NA20129.hp1 |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0050 a0002c0002t0001g0059 |
2 | 340 | 0.0059 | 17 | c.529 others(34): Show |
LRSAM1 | ENSG00000148356.15 | transcript | ENST00000300417.11 | protein_coding | 9/25 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
LRSAM1_chr9_127446510_127508499 | 127466505 | T | TATATATA others(10): Show |
intron_variant | MODIFIER | HG01975.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0047 | 1 | 340 | 0.0029 | 17 | c.529 others(34): Show |
LRSAM1 | ENSG00000148356.15 | transcript | ENST00000300417.11 | protein_coding | 9/25 | chr9 | TogoVar | |||||||
LRWD1_chr7_102459984_102478168 | 102467169 | G | GGTGTGTG others(10): Show |
intron_variant | MODIFIER | HG01517.hp2 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0106 | 1 | 428 | 0.0023 | 17 | c.433 others(32): Show |
LRWD1 | ENSG00000161036.13 | transcript | ENST00000292616.10 | protein_coding | 3/14 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
LSG1_chr3_194635791_194677191 | 194667923 | C | CAAAAAAA others(10): Show |
intron_variant | MODIFIER | HG00741.hp2 HG01433.hp1 HG01978.hp2 others(17): Show |
a0001a0013 | a0001c0003a0001c0005a0013c0025 | a0001c0003t0002a0001c0003t0005a0001c0003t0008others(6): Show | a0001c0003t0002g0179 a0001c0003t0002g0180 a0001c0003t0002g0183 others(15): Show |
20 | 408 | 0.0490 | 17 | c.227 others(34): Show |
LSG1 | ENSG00000041802.11 | transcript | ENST00000265245.10 | protein_coding | 2/13 | chr3 | TogoVar | |||||||
LSG1_chr3_194635791_194677191 | 194667942 | A | AAAAAAAA others(10): Show |
intron_variant | MODIFIER | HG02056.hp2 HG02071.hp2 NA18971.hp2 others(1): Show |
a0001 | a0001c0003 | a0001c0003t0002a0001c0003t0016a0001c0003t0027others(1): Show | a0001c0003t0002g0158 a0001c0003t0016g0156 a0001c0003t0027g0223 others(1): Show |
4 | 408 | 0.0098 | 17 | c.227 others(34): Show |
LSG1 | ENSG00000041802.11 | transcript | ENST00000265245.10 | protein_coding | 2/13 | chr3 | TogoVar | |||||||
LSG1_chr3_194635791_194677191 | 194667942 | A | AAAAAAAA others(10): Show |
intron_variant | MODIFIER | NA18979.hp1 | a0001 | a0001c0003 | a0001c0003t0002 | a0001c0003t0002g0146 | 1 | 408 | 0.0025 | 17 | c.227 others(34): Show |
LSG1 | ENSG00000041802.11 | transcript | ENST00000265245.10 | protein_coding | 2/13 | chr3 | TogoVar | |||||||
LSM14A_chr19_34167504_34234288 | 34192316 | G | GTTTTTTT others(10): Show |
intron_variant | MODIFIER | HG02976.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0137 | 1 | 315 | 0.0032 | 17 | c.122 others(34): Show |
LSM14A | ENSG00000257103.9 | transcript | ENST00000544216.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
LSM14A_chr19_34167504_34234288 | 34192319 | G | GTTTTTTT others(10): Show |
intron_variant | MODIFIER | HG01123.hp2 HG02717.hp1 HG02818.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0032 | a0001c0001t0002g0130 a0001c0001t0002g0132 a0001c0001t0002g0133 others(2): Show |
5 | 315 | 0.0159 | 17 | c.122 others(34): Show |
LSM14A | ENSG00000257103.9 | transcript | ENST00000544216.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
LSM1_chr8_38158339_38181493 | 38168765 | G | GCATATAT others(10): Show |
intron_variant | MODIFIER | HG01884.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0059 | 1 | 402 | 0.0025 | 17 | c.231 others(34): Show |
LSM1 | ENSG00000175324.10 | transcript | ENST00000311351.9 | protein_coding | 3/3 | chr8 | TogoVar | |||||||
LSM1_chr8_38158339_38181493 | 38180522 | C | CAAAAAAA others(10): Show |
upstream_gene_variant | MODIFIER | HG00280.hp2 HG02165.hp2 NA19030.hp2 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003 | a0001c0001t0002g0002 a0001c0001t0002g0037 a0001c0001t0003g0140 |
3 | 402 | 0.0075 | 17 | c.-42 others(28): Show |
LSM1 | ENSG00000175324.10 | transcript | ENST00000311351.9 | protein_coding | 4030 | chr8 | TogoVar | |||||||
LSM7_chr19_2316521_2333586 | 2321100 | C | CTCCTGAT others(10): Show |
downstream_gene_variant | MODIFIER | HG00099.hp2 HG00323.hp2 HG00408.hp1 others(258): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(99): Show |
261 | 436 | 0.5986 | 17 | c.*57 others(26): Show |
LSM7 | ENSG00000130332.15 | transcript | ENST00000252622.15 | protein_coding | 420 | chr19 | TogoVar | |||||||
LSP1_chr11_1848084_1897263 | 1873844 | G | GCCGGCAG others(10): Show |
intron_variant | MODIFIER | HG00323.hp1 HG00408.hp1 HG00597.hp2 others(74): Show |
a0001a0002a0003 | a0001c0002a0001c0003a0002c0001others(6): Show | a0001c0002t0001a0001c0003t0001a0002c0001t0001others(9): Show | a0001c0002t0001g0200 a0001c0003t0001g0258 a0002c0001t0001g0201 others(70): Show |
77 | 360 | 0.2139 | 17 | c.54- others(32): Show |
LSP1 | ENSG00000130592.17 | transcript | ENST00000311604.8 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
LSP1_chr11_1848084_1897263 | 1873999 | T | TGGCAGAG others(10): Show |
intron_variant | MODIFIER | HG03942.hp2 | a0002 | a0002c0001 | a0002c0001t0001 | a0002c0001t0001g0279 | 1 | 360 | 0.0028 | 17 | c.54- others(32): Show |
LSP1 | ENSG00000130592.17 | transcript | ENST00000311604.8 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
LSP1_chr11_1848084_1897263 | 1874041 | G | GAGGGAGG others(10): Show |
intron_variant | MODIFIER | HG01891.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0200 | 1 | 360 | 0.0028 | 17 | c.54- others(32): Show |
LSP1 | ENSG00000130592.17 | transcript | ENST00000311604.8 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
LSP1_chr11_1848084_1897263 | 1874058 | C | CAGGGAGG others(10): Show |
intron_variant | MODIFIER | HG02451.hp2 HG02886.hp2 HG03130.hp2 others(1): Show |
a0003a0008 | a0003c0004a0008c0014 | a0003c0004t0001a0003c0004t0003a0008c0014t0003 | a0003c0004t0001g0195 a0003c0004t0003g0187 a0003c0004t0003g0196 others(1): Show |
4 | 360 | 0.0111 | 17 | c.54- others(32): Show |
LSP1 | ENSG00000130592.17 | transcript | ENST00000311604.8 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
LTBP1_chr2_32941953_33404509 | 32959621 | A | ATATATAT others(10): Show |
intron_variant | MODIFIER | HG03130.hp1 | a0001 | a0001c0008 | a0001c0008t0010 | a0001c0008t0010g0106 | 1 | 164 | 0.0061 | 17 | c.565 others(36): Show |
LTBP1 | ENSG00000049323.16 | transcript | ENST00000404816.7 | protein_coding | 2/33 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
LTBP1_chr2_32941953_33404509 | 33228697 | C | CTTTTTTT others(10): Show |
intron_variant | MODIFIER | HG00639.hp1 HG01071.hp1 HG01243.hp1 others(4): Show |
a0001a0003 | a0001c0005a0001c0007a0001c0018others(3): Show | a0001c0005t0001a0001c0007t0007a0001c0007t0017others(4): Show | a0001c0005t0001g0025 a0001c0007t0007g0091 a0001c0007t0017g0043 others(4): Show |
7 | 164 | 0.0427 | 17 | c.187 others(36): Show |
LTBP1 | ENSG00000049323.16 | transcript | ENST00000404816.7 | protein_coding | 9/33 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
LTBP1_chr2_32941953_33404509 | 33328162 | T | TAAATAAA others(10): Show |
intron_variant | MODIFIER | HG03195.hp1 HG03471.hp2 NA19030.hp1 |
a0002 | a0002c0009 | a0002c0009t0001a0002c0009t0008 | a0002c0009t0001g0157 a0002c0009t0001g0158 a0002c0009t0008g0077 |
3 | 164 | 0.0183 | 17 | c.373 others(38): Show |
LTBP1 | ENSG00000049323.16 | transcript | ENST00000404816.7 | protein_coding | 24/33 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
LTBP1_chr2_32941953_33404509 | 33341729 | A | AAAAATAT others(10): Show |
intron_variant | MODIFIER | NA19063.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0139 | 1 | 164 | 0.0061 | 17 | c.373 others(36): Show |
LTBP1 | ENSG00000049323.16 | transcript | ENST00000404816.7 | protein_coding | 24/33 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
LTBP1_chr2_32941953_33404509 | 33341729 | A | AAATATAT others(10): Show |
intron_variant | MODIFIER | HG00438.hp2 | a0001 | a0001c0005 | a0001c0005t0001 | a0001c0005t0001g0022 | 1 | 164 | 0.0061 | 17 | c.373 others(36): Show |
LTBP1 | ENSG00000049323.16 | transcript | ENST00000404816.7 | protein_coding | 24/33 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
LTBP1_chr2_32941953_33404509 | 33400189 | A | ACCCCCCC others(10): Show |
downstream_gene_variant | MODIFIER | HG01928.hp1 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0096 | 1 | 164 | 0.0061 | 17 | c.*16 others(28): Show |
LTBP1 | ENSG00000049323.16 | transcript | ENST00000404816.7 | protein_coding | 681 | chr2 | TogoVar |