Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
USP13_chr3_179648040_179794401	179687659	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00621.hp1 HG01069.hp2 others(13): Show HG00140.hp2 HG00621.hp1 HG01069.hp2 HG01071.hp1 HG02027.hp2 HG02523.hp1 HG02630.hp2 HG02976.hp1 HG03239.hp1 HG03688.hp1 HG03704.hp1 HG04115.hp1 NA18945.hp1 NA18945.hp2 NA19000.hp2 NA19005.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0037 a0001c0002t0001 a0001c0002t0004 a0001c0002t0007 a0001c0004t0006	a0001c0001t0001g0055 a0001c0001t0001g0078 a0001c0001t0001g0211 others(12): Show a0001c0001t0001g0055 a0001c0001t0001g0078 a0001c0001t0001g0211 a0001c0001t0001g0254 a0001c0001t0002g0007 a0001c0001t0002g0071 a0001c0001t0002g0213 a0001c0001t0002g0223 a0001c0001t0003g0118 a0001c0001t0037g0029 a0001c0002t0001g0154 a0001c0002t0004g0143 a0001c0002t0007g0001 a0001c0002t0007g0175 a0001c0004t0006g0226	16	39	0.4103	17	c.295 others(34): Show c.295-2572_295-2556dupAAAAAAAAAAAAAAAAA	USP13	ENSG00000058056.10	transcript	ENST00000263966.8	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
USP14_chr18_153557_219629	171021	A A	ATATATAT others(10): Show ATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18948.hp1 NA18948.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	342	0.0029	17	c.195 others(34): Show c.195+4202_195+4203insTATATATATATATATAT	USP14	ENSG00000101557.15	transcript	ENST00000261601.8	protein_coding	3/15			chr18	TogoVar
USP14_chr18_153557_219629	171025	A A	AAAAAAAT others(10): Show AAAAAAATATATATATAT	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02622.hp1 HG02258.hp2 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0043 a0001c0001t0003g0043	2	170	0.0118	17	c.195 others(34): Show c.195+4207_195+4208insAAAAATATATATATATA	USP14	ENSG00000101557.15	transcript	ENST00000261601.8	protein_coding	3/15		INFO_REALIGN_3_PRIME	chr18	TogoVar
USP14_chr18_153557_219629	171025	A A	AAATATAT others(10): Show AAATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01070.hp1 HG01071.hp1 HG00642.hp2 HG01070.hp1 HG01071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0029 a0001c0001t0019g0029	3	171	0.0175	17	c.195 others(34): Show c.195+4207_195+4208insATATATATATATATATA	USP14	ENSG00000101557.15	transcript	ENST00000261601.8	protein_coding	3/15		INFO_REALIGN_3_PRIME	chr18	TogoVar
USP14_chr18_153557_219629	213963	A A	AAGATAGA others(10): Show AAGATAGATTAGATAGAT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00621.hp1 HG03831.hp1 HG04184.hp1 others(2): Show HG00621.hp1 HG03831.hp1 HG04184.hp1 NA18950.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0018 a0001c0004t0050 a0001c0001t0018 a0001c0004t0050	a0001c0001t0018g0021 a0001c0001t0018g0022 a0001c0001t0018g0024 others(1): Show a0001c0001t0018g0021 a0001c0001t0018g0022 a0001c0001t0018g0024 a0001c0004t0050g0007	5	307	0.0163	17	c.26 others(28): Show c.2687_*2688insTAGATAGATAGATAGAT	USP14	ENSG00000101557.15	transcript	ENST00000261601.8	protein_coding	16/16	2688	INFO_REALIGN_3_PRIME	chr18	TogoVar
USP17L29_chr4_9348638_9360230	9350136	T T	TCCAGGCC others(10): Show TCCAGGCCCCCGAGTTGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01516.hp2 HG01516.hp2	a0023 a0023	a0023c0019 a0023c0019	a0023c0019t0001 a0023c0019t0001	a0023c0019t0001g0000 a0023c0019t0001g0000	1	146	0.0068	17	c.-35 others(28): Show c.-3502_-3501insCCAGGCCCCCGAGTTGG	USP17L29	ENSG00000231637.3	transcript	ENST00000511681.1	protein_coding		3501		chr4	TogoVar
USP22_chr17_20994596_21048011	21020244	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0055 a0001c0004t0055	a0001c0004t0055g0166 a0001c0004t0055g0166	1	17	0.0588	17	c.418 others(32): Show c.418+852_418+868dupTTTTTTTTTTTTTTTTT	USP22	ENSG00000124422.12	transcript	ENST00000261497.9	protein_coding	3/12			chr17	TogoVar
USP22_chr17_20994596_21048011	21043123	A A	ACCCCCCC others(10): Show ACCCCCCCCCCCCCCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18980.hp2 NA18980.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0044 a0001c0003t0004g0044	1	48	0.0208	17	c.-28 others(26): Show c.-289_-288insGGGGGGGGGGGGGGGGG	USP22	ENSG00000124422.12	transcript	ENST00000261497.9	protein_coding		113		chr17	TogoVar
USP25_chr21_15724982_15885064	15730976	G G	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0056 a0001c0002t0002g0056	1	22	0.0455	17	c.45+ others(30): Show c.45+547_45+563dupTTTTTTTTTTTTTTTTT	USP25	ENSG00000155313.16	transcript	ENST00000400183.7	protein_coding	1/25		INFO_REALIGN_3_PRIME	chr21	TogoVar
USP26_chrX_133018168_133102109	133057866	A A	ATATATAC others(10): Show ATATATACATATTTTTTT	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0034 a0001c0001t0014g0034	1	43	0.0233	17	c.-77 others(36): Show c.-77+25840_-77+25841insAAAAAAATATGTATATA	USP26	ENSG00000134588.13	transcript	ENST00000511190.6	protein_coding	5/5			chrX	TogoVar
USP26_chrX_133018168_133102109	133057866	A A	ATATATAT others(10): Show ATATATATATATTTTTTT	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0015 a0001c0001t0004g0015	1	43	0.0233	17	c.-77 others(36): Show c.-77+25840_-77+25841insAAAAAAATATATATATA	USP26	ENSG00000134588.13	transcript	ENST00000511190.6	protein_coding	5/5			chrX	TogoVar
USP28_chr11_113792875_113880572	113860992	C C	CCGGTAGT others(10): Show CCGGTAGTCCCAGCTACT	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02559.hp1 HG02896.hp2 others(3): Show HG02280.hp2 HG02559.hp1 HG02896.hp2 HG03486.hp2 NA18522.hp1 NA21309.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0005 a0001c0004t0005	a0001c0004t0005g0290 a0001c0004t0005g0291 a0001c0004t0005g0292 others(3): Show a0001c0004t0005g0290 a0001c0004t0005g0291 a0001c0004t0005g0292 a0001c0004t0005g0293 a0001c0004t0005g0294 a0001c0004t0005g0295	6	362	0.0166	17	c.58- others(32): Show c.58-6674_58-6658dupAGTAGCTGGGACTACCG	USP28	ENSG00000048028.12	transcript	ENST00000696973.1	protein_coding	1/25			chr11	TogoVar
USP32_chr17_60172327_60397133	60175189	A A	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19011.hp2 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0051 a0001c0001t0001g0051	1	42	0.0238	17	c.40 others(28): Show c.4065_*4066insAAAAAAAAAAAAAAAAA	USP32	ENSG00000170832.13	transcript	ENST00000300896.9	protein_coding		2137		chr17	TogoVar
USP32_chr17_60172327_60397133	60349626	A A	ATATATAT others(10): Show ATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0092 a0001c0001t0001g0092	1	146	0.0068	17	c.59- others(32): Show c.59-4035_59-4019dupATATATATATATATATA	USP32	ENSG00000170832.13	transcript	ENST00000300896.9	protein_coding	1/33			chr17	TogoVar
USP33_chr1_77690987_77764852	77750663	A A	AGAAAGAA others(10): Show AGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG02080.hp2 HG02135.hp2 NA18957.hp1 others(3): Show HG02080.hp2 HG02135.hp2 NA18957.hp1 NA18982.hp2 NA19060.hp2 NA19089.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0002c0007 a0001c0002 a0001c0003 a0002c0007	a0001c0002t0001 a0001c0003t0003 a0002c0007t0003 a0001c0002t0001 a0001c0003t0003 a0002c0007t0003	a0001c0002t0001g0270 a0001c0002t0001g0273 a0001c0002t0001g0274 others(3): Show a0001c0002t0001g0270 a0001c0002t0001g0273 a0001c0002t0001g0274 a0001c0003t0003g0013 a0001c0003t0003g0014 a0002c0007t0003g0018	6	302	0.0199	17	c.-51 others(34): Show c.-51-8932_-51-8916dupCTTTCTTTCTTTCTTTC	USP33	ENSG00000077254.14	transcript	ENST00000370794.7	protein_coding	1/23			chr1	TogoVar
USP34_chr2_61182463_61476087	61298537	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18990.hp1 NA18990.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0252 a0001c0003t0001g0252	1	18	0.0556	17	c.412 others(36): Show c.4129-1629_4129-1613dupTTTTTTTTTTTTTTTTT	USP34	ENSG00000115464.15	transcript	ENST00000398571.7	protein_coding	29/79			chr2	TogoVar
USP34_chr2_61182463_61476087	61352815	G G	GGATGAAG others(10): Show GGATGAAGAAACAAAGAT	intron_variant intron_variant	MODIFIER	NA18965.hp1 NA18991.hp2 NA18992.hp1 NA18965.hp1 NA18991.hp2 NA18992.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0002 a0001c0003t0001 a0001c0003t0002	a0001c0003t0001g0250 a0001c0003t0001g0253 a0001c0003t0002g0060 a0001c0003t0001g0250 a0001c0003t0001g0253 a0001c0003t0002g0060	3	310	0.0097	17	c.125 others(36): Show c.1252-2139_1252-2123dupATCTTTGTTTCTTCATC	USP34	ENSG00000115464.15	transcript	ENST00000398571.7	protein_coding	10/79			chr2	TogoVar
USP34_chr2_61182463_61476087	61399874	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02970.hp1 NA20129.hp1 HG02922.hp1 HG02970.hp1 NA20129.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0003 a0001c0005t0003	a0001c0005t0003g0144 a0001c0005t0003g0146 a0001c0005t0003g0147 a0001c0005t0003g0144 a0001c0005t0003g0146 a0001c0005t0003g0147	3	118	0.0254	17	c.553 others(34): Show c.553-4658_553-4642dupTTTTTTTTTTTTTTTTT	USP34	ENSG00000115464.15	transcript	ENST00000398571.7	protein_coding	3/79			chr2	TogoVar
USP36_chr17_78790652_78845814	78821421	T T	TATATATA others(10): Show TATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA19004.hp2 NA19004.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0288 a0001c0001t0001g0288	1	333	0.0030	17	c.758 others(32): Show c.758-361_758-360insTATATATATATATATAT	USP36	ENSG00000055483.20	transcript	ENST00000449938.7	protein_coding	7/20			chr17	TogoVar
USP37_chr2_218445251_218573351	218557930	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00323.hp1 HG00639.hp2 others(21): Show HG00140.hp1 HG00323.hp1 HG00639.hp2 HG00642.hp1 HG00741.hp2 HG01081.hp2 HG01255.hp1 HG01261.hp1 NA18959.hp1 NA18960.hp2 NA18963.hp2 NA18965.hp1 NA18966.hp2 NA18967.hp2 NA18971.hp2 NA18987.hp2 NA18998.hp1 NA19011.hp2 NA19056.hp1 NA19063.hp2 NA19064.hp2 NA19065.hp2 NA19081.hp1 NA19089.hp1	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0001 a0001c0001t0028 a0001c0001t0030 others(1): Show a0001c0001t0001 a0001c0001t0028 a0001c0001t0030 a0001c0007t0020	a0001c0001t0001g0199 a0001c0001t0001g0209 a0001c0001t0001g0211 others(21): Show a0001c0001t0001g0199 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0001g0265 a0001c0001t0001g0280 a0001c0001t0028g0208 a0001c0001t0030g0282 a0001c0007t0020g0210 a0001c0007t0020g0216	24	26	0.9231	17	c.156 others(32): Show c.156+551_156+567dupTTTTTTTTTTTTTTTTT	USP37	ENSG00000135913.11	transcript	ENST00000258399.8	protein_coding	4/25			chr2	TogoVar
USP3_chr15_63499593_63599633	63511266	T T	TAAAAAAA others(10): Show TAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00639.hp2 HG01169.hp2 others(6): Show HG00099.hp2 HG00639.hp2 HG01169.hp2 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG02895.hp1 HG03490.hp1 HG03927.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0005 a0001c0001t0024 others(1): Show a0001c0001t0004 a0001c0001t0005 a0001c0001t0024 a0001c0001t0044	a0001c0001t0004g0048 a0001c0001t0004g0060 a0001c0001t0004g0061 others(6): Show a0001c0001t0004g0048 a0001c0001t0004g0060 a0001c0001t0004g0061 a0001c0001t0004g0062 a0001c0001t0004g0063 a0001c0001t0004g0065 a0001c0001t0005g0064 a0001c0001t0024g0059 a0001c0001t0044g0072	9	18	0.5000	17	c.91+ others(32): Show c.91+6452_91+6453insAAAAAAAAAAAAAAAAA	USP3	ENSG00000140455.17	transcript	ENST00000380324.8	protein_coding	1/14		INFO_REALIGN_3_PRIME	chr15	TogoVar
USP3_chr15_63499593_63599633	63580660	A A	ATATATAT others(10): Show ATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00733.hp2 HG01069.hp1 others(2): Show HG00642.hp1 HG00733.hp2 HG01069.hp1 HG01168.hp1 HG03486.hp2	a0001 a0002 a0001 a0002	a0001c0003 a0002c0002 a0001c0003 a0002c0002	a0001c0003t0014 a0002c0002t0008 a0001c0003t0014 a0002c0002t0008	a0001c0003t0014g0139 a0002c0002t0008g0012 a0002c0002t0008g0144 others(2): Show a0001c0003t0014g0139 a0002c0002t0008g0012 a0002c0002t0008g0144 a0002c0002t0008g0145 a0002c0002t0008g0146	5	92	0.0543	17	c.109 others(36): Show c.1096+6257_1096+6258insTATATATATATATATAT	USP3	ENSG00000140455.17	transcript	ENST00000380324.8	protein_coding	11/14			chr15	TogoVar
USP40_chr2_233470526_233571782	233494915	C C	CATTATAT others(10): Show CATTATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02300.hp2 HG02300.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0180 a0002c0002t0001g0180	1	150	0.0067	17	c.279 others(36): Show c.2791-1365_2791-1364insATATATATATATATAAT	USP40	ENSG00000085982.16	transcript	ENST00000678225.2	protein_coding	24/31			chr2	TogoVar
USP40_chr2_233470526_233571782	233512637	A A	AATATTAT others(10): Show AATATTATTTTTCTTAGT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp2 HG00323.hp2 others(78): Show HG00140.hp2 HG00280.hp2 HG00323.hp2 HG00558.hp2 HG00621.hp2 HG00639.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp2 HG01099.hp2 HG01346.hp2 HG01358.hp2 HG01516.hp1 HG01884.hp1 HG01891.hp2 HG02027.hp1 HG02055.hp2 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02129.hp1 HG02132.hp1 HG02145.hp2 HG02257.hp1 HG02572.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03486.hp2 HG03579.hp1 HG03688.hp2 HG04115.hp2 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp1 NA18951.hp2 NA18956.hp2 NA18960.hp2 NA18983.hp2 NA19043.hp1 NA19043.hp2 NA19063.hp1 NA19068.hp2 NA19075.hp2 NA19086.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20752.hp2 NA20805.hp2 NA21309.hp1 NA21309.hp2	a0002 a0004 a0005 others(7): Show a0002 a0004 a0005 a0006 a0007 a0008 a0009 a0011 a0017 a0018	a0002c0008 a0002c0009 a0002c0015 others(12): Show a0002c0008 a0002c0009 a0002c0015 a0004c0004 a0004c0013 a0004c0020 a0004c0021 a0005c0005 a0006c0006 a0007c0007 a0008c0011 a0009c0012 a0011c0017 a0017c0016 a0018c0033	a0002c0008t0009 a0002c0009t0010 a0002c0015t0014 others(14): Show a0002c0008t0009 a0002c0009t0010 a0002c0015t0014 a0004c0004t0003 a0004c0004t0008 a0004c0004t0018 a0004c0013t0003 a0004c0020t0017 a0004c0021t0019 a0005c0005t0006 a0006c0006t0004 a0007c0007t0004 a0008c0011t0013 a0009c0012t0008 a0011c0017t0006 a0017c0016t0009 a0018c0033t0014	a0002c0008t0009g0116 a0002c0008t0009g0117 a0002c0008t0009g0118 others(77): Show a0002c0008t0009g0116 a0002c0008t0009g0117 a0002c0008t0009g0118 a0002c0008t0009g0119 a0002c0008t0009g0120 a0002c0009t0010g0004 a0002c0009t0010g0126 a0002c0009t0010g0127 a0002c0009t0010g0128 a0002c0015t0014g0129 a0002c0015t0014g0130 a0004c0004t0003g0042 a0004c0004t0003g0046 a0004c0004t0003g0047 a0004c0004t0003g0049 a0004c0004t0003g0050 a0004c0004t0003g0051 a0004c0004t0003g0052 a0004c0004t0003g0053 a0004c0004t0003g0054 a0004c0004t0003g0055 a0004c0004t0003g0057 a0004c0004t0003g0058 a0004c0004t0003g0059 a0004c0004t0003g0061 a0004c0004t0003g0062 a0004c0004t0003g0063 a0004c0004t0003g0064 a0004c0004t0003g0067 a0004c0004t0003g0068 a0004c0004t0003g0070 a0004c0004t0003g0071 a0004c0004t0003g0072 a0004c0004t0003g0075 a0004c0004t0003g0078 a0004c0004t0008g0041 a0004c0004t0008g0044 a0004c0004t0008g0066 a0004c0004t0008g0069 a0004c0004t0008g0073 a0004c0004t0008g0077 a0004c0004t0018g0060 a0004c0013t0003g0048 a0004c0013t0003g0065 a0004c0020t0017g0074 a0004c0021t0019g0045 a0005c0005t0006g0008 a0005c0005t0006g0009 a0005c0005t0006g0010 a0005c0005t0006g0011 a0005c0005t0006g0012 a0005c0005t0006g0013 a0005c0005t0006g0015 a0005c0005t0006g0016 a0005c0005t0006g0017 a0005c0005t0006g0018 a0006c0006t0004g0024 a0006c0006t0004g0025 a0006c0006t0004g0026 a0006c0006t0004g0028 a0006c0006t0004g0029 a0006c0006t0004g0031 a0006c0006t0004g0035 a0006c0006t0004g0037 a0006c0006t0004g0039 a0007c0007t0004g0027 a0007c0007t0004g0030 a0007c0007t0004g0032 a0007c0007t0004g0033 a0007c0007t0004g0034 a0007c0007t0004g0036 a0007c0007t0004g0038 a0008c0011t0013g0281 a0008c0011t0013g0282 a0008c0011t0013g0283 a0009c0012t0008g0043 a0009c0012t0008g0076 a0011c0017t0006g0014 a0017c0016t0009g0112 a0018c0033t0014g0292	81	322	0.2516	17	c.238 others(32): Show c.2384-16_2384-15insACTAAGAAAAATAATAT	USP40	ENSG00000085982.16	transcript	ENST00000678225.2	protein_coding	18/31			chr2	TogoVar
USP40_chr2_233470526_233571782	233569522	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03516.hp2 NA18906.hp2 HG03516.hp2 NA18906.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0022 a0002c0002t0001g0023	2	174	0.0115	17	c.-28 others(28): Show c.-2859_-2858insTTTTTTTTTTTTTTTTT	USP40	ENSG00000085982.16	transcript	ENST00000678225.2	protein_coding		2741		chr2	TogoVar
USP42_chr7_6099949_6166564	6114678	A A	ATATATAT others(10): Show ATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19084.hp1 NA19084.hp1	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0001 a0003c0002t0001	a0003c0002t0001g0188 a0003c0002t0001g0188	1	84	0.0119	17	c.242 others(32): Show c.242-644_242-643insATATATATATATATATT	USP42	ENSG00000106346.12	transcript	ENST00000306177.10	protein_coding	2/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
USP42_chr7_6099949_6166564	6114678	A A	ATATATAT others(10): Show ATATATATATATATATTT	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02735.hp1 NA19054.hp2 HG01081.hp1 HG02735.hp1 NA19054.hp2	a0002 a0003 a0002 a0003	a0002c0027 a0003c0002 a0003c0012 a0002c0027 a0003c0002 a0003c0012	a0002c0027t0001 a0003c0002t0001 a0003c0012t0001 a0002c0027t0001 a0003c0002t0001 a0003c0012t0001	a0002c0027t0001g0316 a0003c0002t0001g0175 a0003c0012t0001g0073 a0002c0027t0001g0316 a0003c0002t0001g0175 a0003c0012t0001g0073	3	86	0.0349	17	c.242 others(32): Show c.242-644_242-643insATATATATATATATTTT	USP42	ENSG00000106346.12	transcript	ENST00000306177.10	protein_coding	2/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
USP42_chr7_6099949_6166564	6114678	A A	ATATATAT others(10): Show ATATATATATATATTTTT	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0002 a0002	a0002c0010 a0002c0010	a0002c0010t0001 a0002c0010t0001	a0002c0010t0001g0198 a0002c0010t0001g0198	1	84	0.0119	17	c.242 others(32): Show c.242-644_242-643insATATATATATATTTTTT	USP42	ENSG00000106346.12	transcript	ENST00000306177.10	protein_coding	2/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
USP42_chr7_6099949_6166564	6114678	A A	ATATATAT others(10): Show ATATATATATATTTTTTT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02602.hp1 HG01243.hp1 HG02602.hp1	a0002 a0003 a0002 a0003	a0002c0010 a0003c0002 a0002c0010 a0003c0002	a0002c0010t0001 a0003c0002t0001 a0002c0010t0001 a0003c0002t0001	a0002c0010t0001g0196 a0003c0002t0001g0138 a0002c0010t0001g0196 a0003c0002t0001g0138	2	85	0.0235	17	c.242 others(32): Show c.242-644_242-643insATATATATATTTTTTTT	USP42	ENSG00000106346.12	transcript	ENST00000306177.10	protein_coding	2/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
USP42_chr7_6099949_6166564	6114679	T T	TATATATA others(10): Show TATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18970.hp2 NA18970.hp2	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0001 a0003c0002t0001	a0003c0002t0001g0159 a0003c0002t0001g0159	1	376	0.0027	17	c.242 others(32): Show c.242-644_242-643insATATATATATATATATA	USP42	ENSG00000106346.12	transcript	ENST00000306177.10	protein_coding	2/17			chr7	TogoVar
USP43_chr17_9640517_9734687	9652212	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02896.hp2 HG02897.hp1 HG02647.hp1 HG02896.hp2 HG02897.hp1	a0001 a0001	a0001c0006 a0001c0019 a0001c0006 a0001c0019	a0001c0006t0001 a0001c0019t0002 a0001c0006t0001 a0001c0019t0002	a0001c0006t0001g0315 a0001c0019t0002g0319 a0001c0019t0002g0320 a0001c0006t0001g0315 a0001c0019t0002g0319 a0001c0019t0002g0320	3	294	0.0102	17	c.505 others(34): Show c.505-4190_505-4174dupAAAAAAAAAAAAAAAAA	USP43	ENSG00000154914.17	transcript	ENST00000285199.12	protein_coding	1/14		INFO_REALIGN_3_PRIME	chr17	TogoVar
USP43_chr17_9640517_9734687	9681462	T T	TTTATATA others(10): Show TTTATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18980.hp2 NA18980.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0182 a0001c0004t0001g0182	1	164	0.0061	17	c.110 others(36): Show c.1105+1097_1105+1098insTATATATATATATATAT	USP43	ENSG00000154914.17	transcript	ENST00000285199.12	protein_coding	6/14		INFO_REALIGN_3_PRIME	chr17	TogoVar
USP46_chr4_52585960_52664301	52632980	G G	GAAAGAAA others(10): Show GAAAGAAAGAAAGAAAGA	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01175.hp2 NA19090.hp1 HG01175.hp1 HG01175.hp2 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137	3	169	0.0178	17	c.37- others(32): Show c.37-1837_37-1836insTCTTTCTTTCTTTCTTT	USP46	ENSG00000109189.13	transcript	ENST00000441222.8	protein_coding	1/8			chr4	TogoVar
USP46_chr4_52585960_52664301	52632985	A A	AAAGAAAG others(10): Show AAAGAAAGAAAAGAAAAG	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0110 a0001c0001t0001g0110	1	147	0.0068	17	c.37- others(32): Show c.37-1842_37-1841insCTTTTCTTTTCTTTCTT	USP46	ENSG00000109189.13	transcript	ENST00000441222.8	protein_coding	1/8			chr4	TogoVar
USP48_chr1_21673298_21788149	21694572	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG03195.hp1 NA18522.hp2 others(1): Show HG01106.hp2 HG03195.hp1 NA18522.hp2 NA18953.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0176 a0001c0001t0001g0182 a0001c0001t0001g0221 others(1): Show a0001c0001t0001g0176 a0001c0001t0001g0182 a0001c0001t0001g0221 a0001c0002t0001g0354	4	128	0.0313	17	c.288 others(34): Show c.2883+477_2883+493dupTTTTTTTTTTTTTTTTT	USP48	ENSG00000090686.16	transcript	ENST00000308271.14	protein_coding	23/26			chr1	TogoVar
USP48_chr1_21673298_21788149	21694601	A A	AAAAAAAA others(10): Show AAAAAAAAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0200 a0001c0001t0003g0200	1	344	0.0029	17	c.288 others(34): Show c.2883+464_2883+465insGTTTTTTTTTTTTTTTT	USP48	ENSG00000090686.16	transcript	ENST00000308271.14	protein_coding	23/26			chr1	TogoVar
USP48_chr1_21673298_21788149	21694601	A A	AAAAAAAA others(10): Show AAAAAAAAAAAAACAAAC	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02818.hp1 HG03139.hp1 HG02258.hp2 HG02818.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0127 a0001c0001t0003g0201 a0001c0001t0003g0203 a0001c0001t0003g0127 a0001c0001t0003g0201 a0001c0001t0003g0203	3	346	0.0087	17	c.288 others(34): Show c.2883+464_2883+465insGTTTGTTTTTTTTTTTT	USP48	ENSG00000090686.16	transcript	ENST00000308271.14	protein_coding	23/26			chr1	TogoVar
USP49_chr6_41784896_41900375	41802428	T T	TTTTATTT others(10): Show TTTTATTTTATTTATTTA	intron_variant intron_variant	MODIFIER	NA19001.hp2 NA19001.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0198 a0001c0003t0002g0198	1	326	0.0031	17	c.156 others(36): Show c.1561+1377_1561+1378insTAAATAAATAAAATAAA	USP49	ENSG00000164663.15	transcript	ENST00000682992.1	protein_coding	5/7			chr6	TogoVar
USP4_chr3_49272144_49345053	49295288	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01099.hp2 HG01257.hp1 others(4): Show HG00738.hp1 HG01099.hp2 HG01257.hp1 HG01258.hp2 HG01433.hp2 NA19012.hp2 NA19062.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0111 a0001c0002t0001g0112 a0001c0002t0001g0115 others(4): Show a0001c0002t0001g0111 a0001c0002t0001g0112 a0001c0002t0001g0115 a0001c0002t0001g0140 a0001c0002t0001g0144 a0001c0002t0001g0148 a0001c0002t0001g0149	7	106	0.0660	17	c.169 others(34): Show c.1692-707_1692-691dupTTTTTTTTTTTTTTTTT	USP4	ENSG00000114316.13	transcript	ENST00000265560.9	protein_coding	13/21			chr3	TogoVar
USP4_chr3_49272144_49345053	49295714	G G	GCTGCGCG others(10): Show GCTGCGCGCGCGCGCGCA	intron_variant intron_variant	MODIFIER	NA18963.hp1 NA18963.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0146 a0001c0002t0001g0146	1	200	0.0050	17	c.169 others(36): Show c.1692-1117_1692-1116insTGCGCGCGCGCGCGCAG	USP4	ENSG00000114316.13	transcript	ENST00000265560.9	protein_coding	13/21			chr3	TogoVar
USP4_chr3_49272144_49345053	49309943	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0179 a0001c0001t0002g0179	1	9	0.1111	17	c.954 others(32): Show c.954+660_954+676dupAAAAAAAAAAAAAAAAA	USP4	ENSG00000114316.13	transcript	ENST00000265560.9	protein_coding	8/21			chr3	TogoVar
USP54_chr10_73492538_73596342	73580948	G G	GCAGTAGG others(10): Show GCAGTAGGCTATATCGTA	intron_variant intron_variant	MODIFIER	HG03490.hp2 HG03490.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0114 a0001c0001t0001g0114	1	194	0.0052	17	c.-58 others(36): Show c.-581-4588_-581-4587insTACGATATAGCCTACTG	USP54	ENSG00000166348.20	transcript	ENST00000687698.1	protein_coding	1/23			chr10	TogoVar
USP6NL_chr10_11455510_11616650	11554966	A A	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG01074.hp1 HG01175.hp2 others(20): Show HG00673.hp1 HG01074.hp1 HG01175.hp2 HG01258.hp2 HG01346.hp2 HG01361.hp2 HG01496.hp2 HG01928.hp1 HG01934.hp1 HG01978.hp1 HG02056.hp2 HG03017.hp2 HG03195.hp1 HG03491.hp1 NA18955.hp1 NA18961.hp2 NA18977.hp2 NA18978.hp2 NA18992.hp2 NA19060.hp2 NA19068.hp1 NA19077.hp2 NA19084.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0017 a0004c0012	a0001c0001t0002 a0001c0001t0003 a0001c0001t0011 others(5): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0011 a0001c0002t0002 a0001c0002t0003 a0001c0003t0002 a0001c0017t0003 a0004c0012t0003	a0001c0001t0002g0069 a0001c0001t0002g0073 a0001c0001t0002g0236 others(20): Show a0001c0001t0002g0069 a0001c0001t0002g0073 a0001c0001t0002g0236 a0001c0001t0003g0221 a0001c0001t0003g0229 a0001c0001t0003g0230 a0001c0001t0003g0251 a0001c0001t0003g0256 a0001c0001t0003g0257 a0001c0001t0003g0258 a0001c0001t0003g0260 a0001c0001t0003g0264 a0001c0001t0003g0265 a0001c0001t0003g0272 a0001c0001t0003g0281 a0001c0001t0011g0223 a0001c0002t0002g0065 a0001c0002t0003g0225 a0001c0002t0003g0227 a0001c0002t0003g0278 a0001c0003t0002g0012 a0001c0017t0003g0241 a0004c0012t0003g0279	23	141	0.1631	17	c.5-2 others(32): Show c.5-27416_5-27400dupAAAAAAAAAAAAAAAAA	USP6NL	ENSG00000148429.15	transcript	ENST00000609104.6	protein_coding	2/14			chr10	TogoVar
USP6NL_chr10_11455510_11616650	11555433	A A	AAAAAAAA others(10): Show AAAAAAAAAAAAAAATAT	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0002 a0001c0005t0002	a0001c0005t0002g0377 a0001c0005t0002g0377	1	236	0.0042	17	c.5-2 others(32): Show c.5-27867_5-27866insATATTTTTTTTTTTTTT	USP6NL	ENSG00000148429.15	transcript	ENST00000609104.6	protein_coding	2/14			chr10	TogoVar
USP6NL_chr10_11455510_11616650	11555433	A A	AAAAAAAA others(10): Show AAAAAAAAAAAAATATAT	intron_variant intron_variant	MODIFIER	HG01978.hp1 HG03831.hp1 NA18949.hp1 others(2): Show HG01978.hp1 HG03831.hp1 NA18949.hp1 NA18992.hp2 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0003 a0001c0001t0011 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0011 a0001c0002t0003	a0001c0001t0002g0069 a0001c0001t0002g0236 a0001c0001t0003g0281 others(2): Show a0001c0001t0002g0069 a0001c0001t0002g0236 a0001c0001t0003g0281 a0001c0001t0011g0222 a0001c0002t0003g0226	5	240	0.0208	17	c.5-2 others(32): Show c.5-27867_5-27866insATATATTTTTTTTTTTT	USP6NL	ENSG00000148429.15	transcript	ENST00000609104.6	protein_coding	2/14			chr10	TogoVar
USP6NL_chr10_11455510_11616650	11555651	C C	CCAGTTCA others(10): Show CCAGTTCAAGAGGCACAA	intron_variant intron_variant	MODIFIER	NA18972.hp2 NA18972.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0002 a0001c0004t0002	a0001c0004t0002g0183 a0001c0004t0002g0183	1	400	0.0025	17	c.5-2 others(32): Show c.5-28101_5-28085dupTTGTGCCTCTTGAACTG	USP6NL	ENSG00000148429.15	transcript	ENST00000609104.6	protein_coding	2/14			chr10	TogoVar
USP6_chr17_5111032_5179991	5115555	A A	ACACACAC others(10): Show ACACACACACACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18964.hp1 NA18964.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0084 a0001c0001t0001g0084	1	12	0.0833	17	c.-31 others(28): Show c.-3113_-3112insCACACACACACACACAC	USP6	ENSG00000129204.17	transcript	ENST00000574788.6	protein_coding		476		chr17	TogoVar
USP6_chr17_5111032_5179991	5121220	C C	CCAAGGTC others(10): Show CCAAGGTCCAACGTGGGT	intron_variant intron_variant	MODIFIER	NA18978.hp1 NA18978.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0016 a0002c0002t0016	a0002c0002t0016g0135 a0002c0002t0016g0135	1	360	0.0028	17	c.-16 others(36): Show c.-1674-154_-1674-138dupCAAGGTCCAACGTGGGT	USP6	ENSG00000129204.17	transcript	ENST00000574788.6	protein_coding	3/37		INFO_REALIGN_3_PRIME	chr17	TogoVar
USP7_chr16_8887097_8968906	8897722	A A	ATACATAT others(10): Show ATACATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01106.hp1 HG01109.hp1 HG00280.hp1 HG01106.hp1 HG01109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0035 a0001c0001t0001g0005 a0001c0001t0001g0035	3	190	0.0158	17	c.271 others(34): Show c.2719-624_2719-623insATATATATATATATGTA	USP7	ENSG00000187555.17	transcript	ENST00000344836.9	protein_coding	25/30			chr16	TogoVar
USP7_chr16_8887097_8968906	8897726	A A	AAAAAAAA others(10): Show AAAAAAAAATATATATAT	intron_variant intron_variant	MODIFIER	NA19080.hp2 NA19080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0195 a0001c0001t0001g0195	1	27	0.0370	17	c.271 others(34): Show c.2719-628_2719-627insATATATATATTTTTTTT	USP7	ENSG00000187555.17	transcript	ENST00000344836.9	protein_coding	25/30			chr16	TogoVar

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