Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CCDC66_chr3_56552175_56626837	56556842	G G	GGGGGTGT others(10): Show GGGGGTGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02258.hp2 HG02723.hp1 HG02818.hp2 others(1): Show HG02258.hp2 HG02723.hp1 HG02818.hp2 NA18941.hp2	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0003c0004 a0004c0011 a0001c0001 a0003c0004 a0004c0011	a0001c0001t0001 a0003c0004t0006 a0004c0011t0005 a0001c0001t0001 a0003c0004t0006 a0004c0011t0005	a0001c0001t0001g0019 a0001c0001t0001g0332 a0003c0004t0006g0229 others(1): Show a0001c0001t0001g0019 a0001c0001t0001g0332 a0003c0004t0006g0229 a0004c0011t0005g0236	4	372	0.0108	17	c.-40 others(26): Show c.-401_-400insGGGGTGTGTGTGTGTGT	CCDC66	ENSG00000180376.17	transcript	ENST00000394672.8	protein_coding		332		chr3	TogoVar
CCDC66_chr3_56552175_56626837	56556842	G G	GGGTGTGT others(10): Show GGGTGTGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01928.hp1 NA18963.hp2 HG01928.hp1 NA18963.hp2	a0003 a0005 a0003 a0005	a0003c0004 a0005c0006 a0003c0004 a0005c0006	a0003c0004t0004 a0005c0006t0002 a0003c0004t0004 a0005c0006t0002	a0003c0004t0004g0230 a0005c0006t0002g0006 a0003c0004t0004g0230 a0005c0006t0002g0006	2	372	0.0054	17	c.-40 others(26): Show c.-401_-400insGGTGTGTGTGTGTGTGT	CCDC66	ENSG00000180376.17	transcript	ENST00000394672.8	protein_coding		332		chr3	TogoVar
CCDC66_chr3_56552175_56626837	56597776	G G	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp2 others(24): Show HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00323.hp1 HG00639.hp1 HG01071.hp2 HG01168.hp1 HG01256.hp1 HG01258.hp2 HG01515.hp1 HG01517.hp2 HG01884.hp1 HG02165.hp1 HG02683.hp1 HG03209.hp1 HG03704.hp1 NA18944.hp2 NA18945.hp2 NA18949.hp1 NA18969.hp1 NA18974.hp1 NA18984.hp1 NA19063.hp2 NA19064.hp1 NA19075.hp2 NA20752.hp1 NA20905.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0010 a0001c0003t0001g0011 a0001c0003t0001g0013 others(21): Show a0001c0003t0001g0010 a0001c0003t0001g0011 a0001c0003t0001g0013 a0001c0003t0001g0054 a0001c0003t0001g0056 a0001c0003t0001g0058 a0001c0003t0001g0060 a0001c0003t0001g0061 a0001c0003t0001g0062 a0001c0003t0001g0063 a0001c0003t0001g0064 a0001c0003t0001g0068 a0001c0003t0001g0071 a0001c0003t0001g0076 a0001c0003t0001g0078 a0001c0003t0001g0079 a0001c0003t0001g0080 a0001c0003t0001g0083 a0001c0003t0001g0084 a0001c0003t0001g0089 a0001c0003t0001g0093 a0001c0003t0001g0303 a0001c0003t0001g0306 a0001c0003t0001g0334	27	372	0.0726	17	c.140 others(36): Show c.1404+3748_1404+3749insTTTTTTTTTTTTTTTTT	CCDC66	ENSG00000180376.17	transcript	ENST00000394672.8	protein_coding	10/17			chr3	TogoVar
CCDC69_chr5_151176052_151229092	151227309	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0222 a0002c0002t0004g0222	1	426	0.0024	17	c.-33 others(28): Show c.-3356_-3340dupTTTTTTTTTTTTTTTTT	CCDC69	ENSG00000198624.13	transcript	ENST00000355417.7	protein_coding		3218		chr5	TogoVar
CCDC6_chr10_59783747_59911556	59882279	G G	GCCAGGGG others(10): Show GCCAGGGGGAGAAGGAAA	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0143 a0001c0001t0006g0143	1	288	0.0035	17	c.303 others(36): Show c.303+23842_303+23843insTTTCCTTCTCCCCCTGG	CCDC6	ENSG00000108091.11	transcript	ENST00000263102.7	protein_coding	1/8			chr10	TogoVar
CCDC6_chr10_59783747_59911556	59882279	G G	GCCGGGGG others(10): Show GCCGGGGGGAGAAGGAAA	intron_variant intron_variant	MODIFIER	NA19055.hp2 NA19055.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0161 a0001c0003t0003g0161	1	288	0.0035	17	c.303 others(36): Show c.303+23842_303+23843insTTTCCTTCTCCCCCCGG	CCDC6	ENSG00000108091.11	transcript	ENST00000263102.7	protein_coding	1/8			chr10	TogoVar
CCDC6_chr10_59783747_59911556	59882290	G G	GAGAAGGA others(10): Show GAGAAGGAAAGGAAAGCC	intron_variant intron_variant	MODIFIER	HG03704.hp1 NA18973.hp2 NA19085.hp2 HG03704.hp1 NA18973.hp2 NA19085.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0004 a0001c0001 a0001c0003 a0002c0004	a0001c0001t0002 a0001c0003t0003 a0002c0004t0001 a0001c0001t0002 a0001c0003t0003 a0002c0004t0001	a0001c0001t0002g0090 a0001c0003t0003g0076 a0002c0004t0001g0070 a0001c0001t0002g0090 a0001c0003t0003g0076 a0002c0004t0001g0070	3	288	0.0104	17	c.303 others(36): Show c.303+23831_303+23832insGGCTTTCCTTTCCTTCT	CCDC6	ENSG00000108091.11	transcript	ENST00000263102.7	protein_coding	1/8			chr10	TogoVar
CCDC6_chr10_59783747_59911556	59899875	C C	CACACTGA others(10): Show CACACTGATTGCAATGGT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp2 HG01192.hp2 others(12): Show HG00140.hp1 HG00280.hp2 HG01192.hp2 HG01361.hp2 HG02129.hp2 HG02300.hp2 HG02698.hp1 HG03688.hp1 HG03927.hp1 HG04184.hp2 NA18944.hp1 NA19004.hp2 NA19070.hp1 NA20300.hp2 NA20805.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0004 a0001c0001 a0001c0003 a0002c0004	a0001c0001t0005 a0001c0001t0007 a0001c0001t0012 others(2): Show a0001c0001t0005 a0001c0001t0007 a0001c0001t0012 a0001c0003t0003 a0002c0004t0001	a0001c0001t0005g0001 a0001c0001t0005g0180 a0001c0001t0005g0182 others(11): Show a0001c0001t0005g0001 a0001c0001t0005g0180 a0001c0001t0005g0182 a0001c0001t0007g0181 a0001c0001t0007g0184 a0001c0001t0007g0185 a0001c0001t0007g0191 a0001c0001t0012g0003 a0001c0003t0003g0183 a0002c0004t0001g0175 a0002c0004t0001g0176 a0002c0004t0001g0177 a0002c0004t0001g0178 a0002c0004t0001g0179	15	288	0.0521	17	c.303 others(34): Show c.303+6230_303+6246dupACCATTGCAATCAGTGT	CCDC6	ENSG00000108091.11	transcript	ENST00000263102.7	protein_coding	1/8			chr10	TogoVar
CCDC70_chr13_51856969_51871232	51864081	C C	CCCTTCCT others(10): Show CCCTTCCTTCCCTCCCTT	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02630.hp2 HG02572.hp1 HG02630.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0036 a0002c0002t0001g0037 a0002c0002t0001g0036 a0002c0002t0001g0037	2	430	0.0047	17	c.-80 others(34): Show c.-80-1234_-80-1218dupTCCTTCCTTCCCTCCCT	CCDC70	ENSG00000123171.8	transcript	ENST00000242819.7	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr13	TogoVar
CCDC71_chr3_49157535_49171331	49161063	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0002 a0002c0002t0002g0002	1	242	0.0041	17	c.17 others(28): Show c.1741_*1742insAAAAAAAAAAAAAAAAA	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding		1471		chr3	TogoVar
CCDC7_chr10_32441140_32887864	32507805	A A	ACAGCATT others(10): Show ACAGCATTTCGCAGCATT	intron_variant intron_variant	MODIFIER	NA19081.hp2 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0037 a0001c0001t0002g0037	1	368	0.0027	17	c.873 others(36): Show c.873-10137_873-10121dupGCATTTCGCAGCATTCA	CCDC7	ENSG00000216937.14	transcript	ENST00000639629.2	protein_coding	10/43		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCDC7_chr10_32441140_32887864	32522100	T T	TGCATCAA others(10): Show TGCATCAATAGTCACCAG	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0001 a0004c0005t0001	a0004c0005t0001g0218 a0004c0005t0001g0218	1	368	0.0027	17	c.993 others(34): Show c.993+3596_993+3612dupGCATCAATAGTCACCAG	CCDC7	ENSG00000216937.14	transcript	ENST00000639629.2	protein_coding	12/43		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCDC7_chr10_32441140_32887864	32533246	A A	ACACACAC others(10): Show ACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG03927.hp2 HG03927.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0334 a0001c0001t0001g0334	1	368	0.0027	17	c.994 others(36): Show c.994-10054_994-10053insCACACACACACACACAC	CCDC7	ENSG00000216937.14	transcript	ENST00000639629.2	protein_coding	12/43			chr10	TogoVar
CCDC7_chr10_32441140_32887864	32828434	G G	GGAGAAGA others(10): Show GGAGAAGAAGAAGAAGAA	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0124 a0001c0001t0001g0124	1	368	0.0027	17	c.326 others(36): Show c.3268+3832_3268+3833insGAAGAAGAAGAAGAAGA	CCDC7	ENSG00000216937.14	transcript	ENST00000639629.2	protein_coding	33/43		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCDC85A_chr2_56178990_56391172	56189295	G G	GTATTTTT others(10): Show GTATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01258.hp2 HG01361.hp2 HG02683.hp2 others(1): Show HG01258.hp2 HG01361.hp2 HG02683.hp2 HG03688.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0208 a0001c0001t0001g0210 a0001c0001t0001g0211 others(1): Show a0001c0001t0001g0208 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0002g0209	4	308	0.0130	17	c.277 others(34): Show c.277-3181_277-3180insATTTTTTTTTTTTTTTT	CCDC85A	ENSG00000055813.6	transcript	ENST00000407595.3	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr2	TogoVar
CCDC85A_chr2_56178990_56391172	56189297	G G	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01243.hp1 NA19240.hp2 HG01243.hp1 NA19240.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0005 a0002c0002t0016 a0002c0002t0005 a0002c0002t0016	a0002c0002t0005g0086 a0002c0002t0016g0083 a0002c0002t0005g0086 a0002c0002t0016g0083	2	308	0.0065	17	c.277 others(34): Show c.277-3165_277-3164insTTTTTTTTTTTTTTTTT	CCDC85A	ENSG00000055813.6	transcript	ENST00000407595.3	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr2	TogoVar
CCDC85C_chr14_99495190_99609207	99509541	C C	CGCAGCAC others(10): Show CGCAGCACGCACAGACAT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01884.hp2 HG02647.hp2 HG03130.hp2 HG01884.hp2 HG02647.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0042 a0001c0003t0036 a0001c0003t0050 a0001c0001t0042 a0001c0003t0036 a0001c0003t0050	a0001c0001t0042g0074 a0001c0003t0036g0045 a0001c0003t0050g0055 a0001c0001t0042g0074 a0001c0003t0036g0045 a0001c0003t0050g0055	3	300	0.0100	17	c.57 others(28): Show c.5704_*5705insATGTCTGTGCGTGCTGC	CCDC85C	ENSG00000205476.9	transcript	ENST00000380243.9	protein_coding	6/6	5704		chr14	TogoVar
CCDC88A_chr2_55282842_55424856	55367528	G G	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTGTT	intron_variant intron_variant	MODIFIER	NA18954.hp2 NA18959.hp2 NA19081.hp2 NA18954.hp2 NA18959.hp2 NA19081.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0007 a0001c0001 a0004c0007	a0001c0001t0001 a0004c0007t0001 a0001c0001t0001 a0004c0007t0001	a0001c0001t0001g0239 a0001c0001t0001g0264 a0004c0007t0001g0284 a0001c0001t0001g0239 a0001c0001t0001g0264 a0004c0007t0001g0284	3	316	0.0095	17	c.403 others(34): Show c.403-3496_403-3495insAACAAAAAAAAAAAAAA	CCDC88A	ENSG00000115355.18	transcript	ENST00000436346.7	protein_coding	5/32			chr2	TogoVar
CCDC88A_chr2_55282842_55424856	55367528	G G	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG01346.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0155 a0001c0001t0002g0155	1	316	0.0032	17	c.403 others(34): Show c.403-3496_403-3495insAAAAAAAAAAAAAAAAA	CCDC88A	ENSG00000115355.18	transcript	ENST00000436346.7	protein_coding	5/32			chr2	TogoVar
CCDC88A_chr2_55282842_55424856	55401433	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18949.hp2 NA18960.hp2 NA18966.hp2 others(2): Show NA18949.hp2 NA18960.hp2 NA18966.hp2 NA18969.hp2 NA18992.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0104 a0001c0001t0002g0108 a0001c0001t0002g0110 others(2): Show a0001c0001t0002g0104 a0001c0001t0002g0108 a0001c0001t0002g0110 a0001c0001t0002g0116 a0001c0001t0002g0147	5	316	0.0158	17	c.165 others(36): Show c.165-12548_165-12547insTTTTTTTTTTTTTTTTT	CCDC88A	ENSG00000115355.18	transcript	ENST00000436346.7	protein_coding	2/32			chr2	TogoVar
CCDC8_chr19_46405329_46418564	46409897	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00733.hp2 HG00733.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0000 a0001c0001t0003g0000	1	456	0.0022	17	c.12 others(28): Show c.1296_*1297insAAAAAAAAAAAAAAAAA	CCDC8	ENSG00000169515.9	transcript	ENST00000307522.5	protein_coding		431		chr19	TogoVar
CCDC8_chr19_46405329_46418564	46414178	C C	CAAAAAAT others(10): Show CAAAAAATACAAAAATTA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00323.hp2 others(122): Show HG00099.hp1 HG00140.hp2 HG00323.hp2 HG00423.hp2 HG00438.hp1 HG00558.hp2 HG00597.hp1 HG00621.hp1 HG00673.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01167.hp2 HG01175.hp2 HG01243.hp1 HG01256.hp2 HG01258.hp2 HG01261.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01516.hp2 HG01884.hp1 HG01891.hp1 HG01934.hp1 HG02055.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02165.hp1 HG02257.hp2 HG02258.hp2 HG02280.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp2 HG02602.hp2 HG02615.hp1 HG02630.hp1 HG02647.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02809.hp2 HG02818.hp2 HG02896.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp2 HG03486.hp2 HG03491.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03710.hp1 HG03834.hp1 HG03942.hp1 HG04115.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18747.hp2 NA18939.hp2 NA18945.hp2 NA18946.hp2 NA18952.hp2 NA18955.hp2 NA18956.hp1 NA18957.hp1 NA18963.hp2 NA18966.hp1 NA18970.hp2 NA18973.hp2 NA18981.hp1 NA18985.hp1 NA18990.hp1 NA18994.hp2 NA18995.hp2 NA18998.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19057.hp2 NA19058.hp1 NA19065.hp1 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19079.hp2 NA19085.hp1 NA19240.hp1 NA20129.hp2 NA20300.hp1 NA20752.hp1 NA20752.hp2 NA20905.hp2	a0001 a0003 a0004 others(4): Show a0001 a0003 a0004 a0008 a0011 a0013 a0014	a0001c0001 a0001c0005 a0001c0012 others(6): Show a0001c0001 a0001c0005 a0001c0012 a0003c0003 a0004c0004 a0008c0011 a0011c0018 a0013c0017 a0014c0016	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(20): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0016 a0001c0001t0018 a0001c0001t0020 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0005t0005 a0001c0005t0021 a0001c0012t0005 a0003c0003t0001 a0003c0003t0002 a0004c0004t0006 a0004c0004t0023 a0008c0011t0005 a0011c0018t0001 a0013c0017t0005 a0014c0016t0001	a0001c0001t0001g0000 a0001c0001t0004g0000 a0001c0001t0005g0000 others(20): Show a0001c0001t0001g0000 a0001c0001t0004g0000 a0001c0001t0005g0000 a0001c0001t0008g0000 a0001c0001t0009g0000 a0001c0001t0010g0000 a0001c0001t0016g0000 a0001c0001t0018g0000 a0001c0001t0020g0000 a0001c0001t0026g0000 a0001c0001t0027g0000 a0001c0001t0028g0000 a0001c0005t0005g0000 a0001c0005t0021g0000 a0001c0012t0005g0000 a0003c0003t0001g0000 a0003c0003t0002g0000 a0004c0004t0006g0000 a0004c0004t0023g0000 a0008c0011t0005g0000 a0011c0018t0001g0000 a0013c0017t0005g0000 a0014c0016t0001g0000	125	456	0.2741	17	c.-13 others(28): Show c.-1369_-1368insTAATTTTTGTATTTTTT	CCDC8	ENSG00000169515.9	transcript	ENST00000307522.5	protein_coding		615		chr19	TogoVar
CCDC9B_chr15_40326452_40345939	40333566	T T	TAAAAAAA others(10): Show TAAAAAAAAAAAAAAAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02896.hp2 HG03098.hp1 HG02896.hp2 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0060 a0001c0001t0062 a0001c0001t0060 a0001c0001t0062	a0001c0001t0060g0101 a0001c0001t0062g0109 a0001c0001t0060g0101 a0001c0001t0062g0109	2	422	0.0047	17	c.15 others(28): Show c.1575_*1591dupTTTTTTTTTTTTTTTTT	CCDC9B	ENSG00000188549.13	transcript	ENST00000397536.7	protein_coding	11/11	1591		chr15	TogoVar
CCDC9_chr19_47251525_47276953	47254469	A A	ATATATAT others(10): Show ATATATATATACATTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01358.hp2 HG01358.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0084 a0001c0003t0002g0084	1	402	0.0025	17	c.-22 others(28): Show c.-2212_-2211insTATATATATACATTTTT	CCDC9	ENSG00000105321.14	transcript	ENST00000221922.11	protein_coding		2055		chr19	TogoVar
CCDC9_chr19_47251525_47276953	47254469	A A	ATATATAT others(10): Show ATATATATATATATATAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03927.hp1 HG03927.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0082 a0002c0001t0082	a0002c0001t0082g0037 a0002c0001t0082g0037	1	402	0.0025	17	c.-22 others(28): Show c.-2212_-2211insTATATATATATATATAC	CCDC9	ENSG00000105321.14	transcript	ENST00000221922.11	protein_coding		2055		chr19	TogoVar
CCDC9_chr19_47251525_47276953	47254469	A A	ATATATAT others(10): Show ATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18950.hp2 NA18950.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0013 a0002c0001t0013	a0002c0001t0013g0168 a0002c0001t0013g0168	1	402	0.0025	17	c.-22 others(28): Show c.-2212_-2211insTATATATATATATATAT	CCDC9	ENSG00000105321.14	transcript	ENST00000221922.11	protein_coding		2055		chr19	TogoVar
CCKBR_chr11_6254838_6277127	6259548	T T	TCTCTCTC others(10): Show TCTCTCTCTCTCTCTCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02027.hp2 HG02027.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	426	0.0024	17	c.-38 others(26): Show c.-381_-380insCTCTCTCTCTCTCTCTC	CCKBR	ENSG00000110148.10	transcript	ENST00000334619.7	protein_coding		289		chr11	TogoVar
CCKBR_chr11_6254838_6277127	6261454	A A	AAAAAAAA others(10): Show AAAAAAAAATATATATAT	intron_variant intron_variant	MODIFIER	NA18952.hp1 NA19075.hp1 NA19087.hp1 NA18952.hp1 NA19075.hp1 NA19087.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0005 a0002c0002t0001 a0002c0002t0005	a0002c0002t0001g0077 a0002c0002t0001g0078 a0002c0002t0005g0076 a0002c0002t0001g0077 a0002c0002t0001g0078 a0002c0002t0005g0076	3	426	0.0070	17	c.151 others(34): Show c.151+1376_151+1377insAAAAAAATATATATATA	CCKBR	ENSG00000110148.10	transcript	ENST00000334619.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr11	TogoVar
CCKBR_chr11_6254838_6277127	6261454	A A	AAAAAAAT others(10): Show AAAAAAATATATATATAT	intron_variant intron_variant	MODIFIER	NA19088.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0127 a0001c0001t0001g0127	1	426	0.0024	17	c.151 others(34): Show c.151+1376_151+1377insAAAAATATATATATATA	CCKBR	ENSG00000110148.10	transcript	ENST00000334619.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr11	TogoVar
CCL15_chr17_35992582_36006553	36003667	A A	AAAAAAAA others(10): Show AAAAAAAAAAAAAAAAGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG02145.hp2 HG02922.hp1 HG01243.hp2 HG02145.hp2 HG02922.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0021 a0001c0001t0001g0035 a0002c0002t0001g0003 a0001c0001t0001g0021 a0001c0001t0001g0035 a0002c0002t0001g0003	3	441	0.0068	17	c.-21 others(28): Show c.-2176_-2175insGCTTTTTTTTTTTTTTT	CCL15	ENSG00000275718.2	transcript	ENST00000617897.2	protein_coding		2115		chr17	TogoVar
CCL25_chr19_8047760_8067650	8059122	T T	TGTATATA others(10): Show TGTATATATTTATATATA	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0168 a0002c0002t0001g0168	1	428	0.0023	17	c.445 others(34): Show c.445+1202_445+1203insGTATATATTTATATATA	CCL25	ENSG00000131142.14	transcript	ENST00000315626.6	protein_coding	5/5			chr19	TogoVar
CCL26_chr7_75764538_75777211	75767337	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19080.hp1 NA19080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	424	0.0024	17	c.23 others(28): Show c.2355_*2356insTTTTTTTTTTTTTTTTT	CCL26	ENSG00000006606.9	transcript	ENST00000005180.9	protein_coding		2200		chr7	TogoVar
CCL28_chr5_43374193_43417391	43407839	C C	CAGACATT others(10): Show CAGACATTTCTGAAAAGA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00280.hp1 others(193): Show HG00099.hp1 HG00140.hp2 HG00280.hp1 HG00323.hp2 HG00544.hp1 HG00639.hp2 HG00642.hp2 HG00733.hp1 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01943.hp1 HG01952.hp1 HG01978.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp2 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp2 HG04184.hp2 HG04199.hp2 HG04204.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18942.hp2 NA18943.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp1 NA18954.hp2 NA18955.hp2 NA18963.hp2 NA18964.hp2 NA18966.hp2 NA18967.hp2 NA18970.hp1 NA18973.hp1 NA18978.hp1 NA18979.hp1 NA18980.hp1 NA18981.hp1 NA18995.hp1 NA19000.hp1 NA19001.hp1 NA19002.hp2 NA19003.hp1 NA19009.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19058.hp1 NA19064.hp1 NA19065.hp2 NA19072.hp1 NA19083.hp1 NA19085.hp2 NA19086.hp2 NA19089.hp1 NA19089.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA20905.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0001t0016 a0001c0001t0017 a0002c0002t0010 a0003c0003t0012	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0007 others(99): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0027 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0036 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0045 a0001c0001t0001g0049 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0063 a0001c0001t0001g0065 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0140 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0002g0040 a0001c0001t0002g0043 a0001c0001t0002g0066 a0001c0001t0002g0126 a0001c0001t0002g0127 a0001c0001t0003g0010 a0001c0001t0003g0011 a0001c0001t0003g0023 a0001c0001t0003g0029 a0001c0001t0003g0039 a0001c0001t0003g0074 a0001c0001t0003g0135 a0001c0001t0003g0154 a0001c0001t0003g0155 a0001c0001t0004g0003 a0001c0001t0004g0046 a0001c0001t0004g0047 a0001c0001t0004g0048 a0001c0001t0004g0050 a0001c0001t0004g0057 a0001c0001t0005g0014 a0001c0001t0005g0136 a0001c0001t0005g0137 a0001c0001t0005g0138 a0001c0001t0005g0139 a0001c0001t0006g0015 a0001c0001t0006g0044 a0001c0001t0006g0051 a0001c0001t0006g0129 a0001c0001t0006g0153 a0001c0001t0007g0024 a0001c0001t0007g0053 a0001c0001t0007g0054 a0001c0001t0008g0013 a0001c0001t0009g0028 a0001c0001t0009g0064 a0001c0001t0009g0123 a0001c0001t0011g0038 a0001c0001t0013g0128 a0001c0001t0016g0150 a0001c0001t0017g0052 a0002c0002t0010g0026 a0002c0002t0010g0131 a0003c0003t0012g0156 a0003c0003t0012g0157	196	326	0.6012	17	c.64+ others(32): Show c.64+4397_64+4413dupTCTTTTCAGAAATGTCT	CCL28	ENSG00000151882.11	transcript	ENST00000361115.4	protein_coding	1/2			chr5	TogoVar
CCL3_chr17_36083256_36095143	36094369	A A	AAGAAAGA others(10): Show AAGAAAGAGAAAGAAAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp2 HG00438.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0003 a0001c0002t0002g0003	1	381	0.0026	17	c.-43 others(28): Show c.-4312_-4311insCCTTTCTTTCTCTTTCT	CCL3	ENSG00000277632.2	transcript	ENST00000613922.2	protein_coding		4227		chr17	TogoVar
CCL4_chr17_36098827_36110614	36101028	G G	GACATATA others(10): Show GACATATATATATATAAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19006.hp2 NA19006.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0001 a0003c0004t0001g0001	1	413	0.0024	17	c.-28 others(28): Show c.-2878_-2877insACATATATATATATAAT	CCL4	ENSG00000275302.2	transcript	ENST00000615863.2	protein_coding		2798		chr17	TogoVar
CCM2_chr7_44995201_45081453	45042265	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00323.hp2 NA18956.hp2 NA18965.hp2 others(4): Show HG00323.hp2 NA18956.hp2 NA18965.hp2 NA18967.hp2 NA18987.hp2 NA19000.hp2 NA19065.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0002 a0001c0002t0001 a0001c0002t0002	a0001c0002t0001g0068 a0001c0002t0001g0091 a0001c0002t0001g0096 others(4): Show a0001c0002t0001g0068 a0001c0002t0001g0091 a0001c0002t0001g0096 a0001c0002t0001g0099 a0001c0002t0001g0198 a0001c0002t0001g0314 a0001c0002t0002g0126	7	316	0.0222	17	c.204 others(34): Show c.204+3849_204+3850insAAAAAAAAAAAAAAAAA	CCM2	ENSG00000136280.17	transcript	ENST00000258781.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr7	TogoVar
CCM2_chr7_44995201_45081453	45079185	A A	AGGGGACA others(10): Show AGGGGACATCAGAAGGCG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02922.hp2 HG02976.hp2 HG03471.hp1 others(1): Show HG02922.hp2 HG02976.hp2 HG03471.hp1 NA18906.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0012 a0001c0002t0002g0062 a0001c0002t0002g0063 others(1): Show a0001c0002t0002g0012 a0001c0002t0002g0062 a0001c0002t0002g0063 a0001c0002t0002g0306	4	316	0.0127	17	c.31 others(28): Show c.3128_*3129insGGGGACATCAGAAGGCG	CCM2	ENSG00000136280.17	transcript	ENST00000258781.11	protein_coding		2733		chr7	TogoVar
CCN4_chr8_133186039_133236690	133190559	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0345 a0001c0001t0001g0345	1	396	0.0025	17	c.-58 others(26): Show c.-586_-585insAAAAAAAAAAAAAAAAA	CCN4	ENSG00000104415.14	transcript	ENST00000250160.11	protein_coding		479		chr8	TogoVar
CCNB1IP1_chr14_20306370_20338279	20332010	A A	ATATATAT others(10): Show ATATATATATATGATGTG	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02486.hp1 HG02622.hp1 others(3): Show HG02280.hp2 HG02486.hp1 HG02622.hp1 HG02965.hp2 HG03486.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0017 a0001c0001t0003g0280 a0001c0001t0003g0282 others(1): Show a0001c0001t0003g0017 a0001c0001t0003g0280 a0001c0001t0003g0282 a0001c0001t0003g0283	6	418	0.0144	17	c.-43 others(36): Show c.-431+1243_-431+1244insCACATCATATATATATA	CCNB1IP1	ENSG00000100814.19	transcript	ENST00000358932.9	protein_coding	1/6			chr14	TogoVar
CCNB1_chr5_69162150_69183245	69164026	A A	AAAAATAT others(10): Show AAAAATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01258.hp2 HG01258.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0005 a0001c0002t0001g0005	1	420	0.0024	17	c.-32 others(28): Show c.-3237_-3236insAAAATATATATATATAT	CCNB1	ENSG00000134057.15	transcript	ENST00000256442.10	protein_coding		3123		chr5	TogoVar
CCNC_chr6_99537387_99573660	99569730	G G	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02074.hp1 HG03492.hp1 NA18940.hp2 others(2): Show HG02074.hp1 HG03492.hp1 NA18940.hp2 NA19006.hp2 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0020 a0001c0001t0001g0042 others(2): Show a0001c0001t0001g0004 a0001c0001t0001g0020 a0001c0001t0001g0042 a0001c0001t0001g0182 a0001c0001t0001g0188	5	410	0.0122	17	c.-12 others(28): Show c.-1220_-1204dupAAAAAAAAAAAAAAAAA	CCNC	ENSG00000112237.13	transcript	ENST00000520429.6	protein_coding		1071		chr6	TogoVar
CCNK_chr14_99476409_99517440	99509541	C C	CGCAGCAC others(10): Show CGCAGCACGCACAGACAT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02647.hp2 HG03130.hp2 HG01884.hp2 HG02647.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0002g0053 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0002g0053	3	326	0.0092	17	c.111 others(34): Show c.1118-604_1118-603insGACATGCAGCACGCACA	CCNK	ENSG00000090061.17	transcript	ENST00000389879.9	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr14	TogoVar
CCNL1_chr3_157142553_157165147	157145437	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00597.hp1 HG00621.hp1 HG01109.hp1 others(28): Show HG00597.hp1 HG00621.hp1 HG01109.hp1 HG01175.hp1 HG01433.hp2 HG01517.hp1 HG01952.hp2 HG02071.hp1 HG02135.hp1 HG02647.hp2 HG02970.hp2 HG03492.hp2 HG03831.hp1 HG06807.hp2 NA18944.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18953.hp1 NA18959.hp2 NA18962.hp1 NA18965.hp1 NA18967.hp2 NA18982.hp2 NA18988.hp2 NA19000.hp1 NA19062.hp2 NA19065.hp1 NA19075.hp2 NA19078.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005	a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0012 others(8): Show a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0012 a0001c0001t0001g0023 a0001c0001t0001g0095 a0001c0001t0001g0097 a0001c0001t0002g0014 a0001c0001t0002g0093 a0001c0001t0002g0098 a0001c0001t0004g0044 a0001c0001t0005g0045	31	426	0.0728	17	c.28 others(28): Show c.2803_*2804insTTTTTTTTTTTTTTTTT	CCNL1	ENSG00000163660.12	transcript	ENST00000295926.8	protein_coding		2115		chr3	TogoVar
CCNT1_chr12_48683458_48721707	48697534	A A	AAAAAAAA others(10): Show AAAAAAAAAAAAAAATAT	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0030 a0001c0002t0030	a0001c0002t0030g0115 a0001c0002t0030g0115	1	386	0.0026	17	c.542 others(32): Show c.542+603_542+604insATATTTTTTTTTTTTTT	CCNT1	ENSG00000129315.12	transcript	ENST00000261900.8	protein_coding	6/8			chr12	TogoVar
CCNT2_chr2_134913822_134964342	134931262	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01071.hp2 HG01168.hp2 others(31): Show HG01069.hp1 HG01071.hp2 HG01168.hp2 HG01169.hp1 HG01243.hp1 HG01255.hp1 HG01257.hp1 HG02071.hp2 HG02559.hp1 HG02698.hp1 HG02735.hp2 HG03471.hp2 HG03492.hp2 HG04199.hp2 NA18906.hp1 NA18943.hp2 NA18944.hp1 NA18952.hp1 NA18953.hp1 NA18968.hp2 NA18974.hp2 NA18975.hp2 NA18984.hp1 NA18992.hp2 NA19001.hp2 NA19005.hp1 NA19011.hp1 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19062.hp2 NA19070.hp1 NA19072.hp2 NA20905.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0009 a0001c0001 a0003c0009	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0011 a0001c0001t0024 a0003c0009t0004	a0001c0001t0001g0147 a0001c0001t0001g0151 a0001c0001t0001g0167 others(31): Show a0001c0001t0001g0147 a0001c0001t0001g0151 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0003g0211 a0001c0001t0004g0182 a0001c0001t0004g0223 a0001c0001t0004g0225 a0001c0001t0004g0227 a0001c0001t0004g0236 a0001c0001t0004g0240 a0001c0001t0004g0244 a0001c0001t0004g0246 a0001c0001t0004g0252 a0001c0001t0004g0255 a0001c0001t0005g0222 a0001c0001t0005g0279 a0001c0001t0005g0298 a0001c0001t0005g0306 a0001c0001t0005g0309 a0001c0001t0005g0310 a0001c0001t0005g0312 a0001c0001t0005g0315 a0001c0001t0005g0320 a0001c0001t0005g0321 a0001c0001t0005g0323 a0001c0001t0005g0326 a0001c0001t0006g0291 a0001c0001t0006g0292 a0001c0001t0006g0316 a0001c0001t0011g0248 a0001c0001t0011g0249 a0001c0001t0024g0234 a0003c0009t0004g0245	34	404	0.0842	17	c.241 others(34): Show c.241-5570_241-5554dupTTTTTTTTTTTTTTTTT	CCNT2	ENSG00000082258.13	transcript	ENST00000264157.10	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CCNT2_chr2_134913822_134964342	134960157	G G	GTTATCTG others(10): Show GTTATCTGGAAGGGGAAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp2 HG00408.hp1 HG00408.hp2 others(302): Show HG00140.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp2 HG01099.hp2 HG01123.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01257.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp2 HG01517.hp2 HG01943.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG02015.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp2 HG02451.hp1 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02630.hp2 HG02647.hp2 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03225.hp2 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04228.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp2 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp2 NA18971.hp1 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18990.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp2 NA19007.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp1 NA19054.hp2 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19066.hp1 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19081.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0003 a0001c0004 others(2): Show a0001c0001 a0001c0003 a0001c0004 a0002c0005 a0003c0009	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(20): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0024 a0001c0001t0025 a0001c0003t0012 a0001c0004t0005 a0002c0005t0005 a0003c0009t0004	a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0008 others(271): Show a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0024 a0001c0001t0001g0033 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0120 a0001c0001t0001g0122 a0001c0001t0001g0126 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0332 a0001c0001t0001g0333 a0001c0001t0001g0335 a0001c0001t0001g0336 a0001c0001t0003g0013 a0001c0001t0003g0014 a0001c0001t0003g0025 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0183 a0001c0001t0003g0184 a0001c0001t0003g0185 a0001c0001t0003g0186 a0001c0001t0003g0187 a0001c0001t0003g0188 a0001c0001t0003g0189 a0001c0001t0003g0190 a0001c0001t0003g0191 a0001c0001t0003g0192 a0001c0001t0003g0193 a0001c0001t0003g0194 a0001c0001t0003g0195 a0001c0001t0003g0196 a0001c0001t0003g0197 a0001c0001t0003g0198 a0001c0001t0003g0199 a0001c0001t0003g0200 a0001c0001t0003g0201 a0001c0001t0003g0202 a0001c0001t0003g0203 a0001c0001t0003g0204 a0001c0001t0003g0205 a0001c0001t0003g0206 a0001c0001t0003g0207 a0001c0001t0003g0208 a0001c0001t0003g0209 a0001c0001t0003g0210 a0001c0001t0003g0211 a0001c0001t0003g0212 a0001c0001t0003g0213 a0001c0001t0003g0214 a0001c0001t0003g0216 a0001c0001t0003g0217 a0001c0001t0003g0218 a0001c0001t0003g0220 a0001c0001t0003g0221 a0001c0001t0004g0031 a0001c0001t0004g0032 a0001c0001t0004g0182 a0001c0001t0004g0223 a0001c0001t0004g0224 a0001c0001t0004g0225 a0001c0001t0004g0226 a0001c0001t0004g0227 a0001c0001t0004g0228 a0001c0001t0004g0229 a0001c0001t0004g0230 a0001c0001t0004g0231 a0001c0001t0004g0232 a0001c0001t0004g0233 a0001c0001t0004g0235 a0001c0001t0004g0236 a0001c0001t0004g0237 a0001c0001t0004g0238 a0001c0001t0004g0239 a0001c0001t0004g0240 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0243 a0001c0001t0004g0244 a0001c0001t0004g0246 a0001c0001t0004g0251 a0001c0001t0004g0252 a0001c0001t0004g0253 a0001c0001t0004g0254 a0001c0001t0004g0255 a0001c0001t0004g0256 a0001c0001t0004g0257 a0001c0001t0004g0258 a0001c0001t0004g0259 a0001c0001t0004g0260 a0001c0001t0004g0261 a0001c0001t0004g0263 a0001c0001t0004g0264 a0001c0001t0004g0265 a0001c0001t0004g0266 a0001c0001t0004g0267 a0001c0001t0004g0268 a0001c0001t0004g0269 a0001c0001t0004g0270 a0001c0001t0004g0271 a0001c0001t0004g0272 a0001c0001t0004g0273 a0001c0001t0004g0274 a0001c0001t0004g0275 a0001c0001t0004g0276 a0001c0001t0004g0331 a0001c0001t0005g0181 a0001c0001t0005g0219 a0001c0001t0005g0222 a0001c0001t0005g0277 a0001c0001t0005g0278 a0001c0001t0005g0279 a0001c0001t0005g0280 a0001c0001t0005g0281 a0001c0001t0005g0295 a0001c0001t0005g0296 a0001c0001t0005g0297 a0001c0001t0005g0298 a0001c0001t0005g0299 a0001c0001t0005g0300 a0001c0001t0005g0301 a0001c0001t0005g0303 a0001c0001t0005g0305 a0001c0001t0005g0306 a0001c0001t0005g0307 a0001c0001t0005g0308 a0001c0001t0005g0309 a0001c0001t0005g0310 a0001c0001t0005g0312 a0001c0001t0005g0313 a0001c0001t0005g0314 a0001c0001t0005g0315 a0001c0001t0005g0317 a0001c0001t0005g0319 a0001c0001t0005g0320 a0001c0001t0005g0321 a0001c0001t0005g0323 a0001c0001t0005g0324 a0001c0001t0005g0325 a0001c0001t0005g0326 a0001c0001t0005g0328 a0001c0001t0005g0329 a0001c0001t0006g0287 a0001c0001t0006g0288 a0001c0001t0006g0289 a0001c0001t0006g0290 a0001c0001t0006g0291 a0001c0001t0006g0292 a0001c0001t0006g0293 a0001c0001t0006g0294 a0001c0001t0006g0311 a0001c0001t0006g0316 a0001c0001t0006g0318 a0001c0001t0006g0322 a0001c0001t0006g0327 a0001c0001t0007g0282 a0001c0001t0007g0283 a0001c0001t0007g0284 a0001c0001t0007g0285 a0001c0001t0007g0286 a0001c0001t0007g0330 a0001c0001t0008g0077 a0001c0001t0008g0078 a0001c0001t0008g0079 a0001c0001t0008g0099 a0001c0001t0008g0100 a0001c0001t0010g0148 a0001c0001t0010g0162 a0001c0001t0010g0163 a0001c0001t0011g0248 a0001c0001t0011g0249 a0001c0001t0011g0250 a0001c0001t0014g0262 a0001c0001t0015g0155 a0001c0001t0016g0215 a0001c0001t0017g0334 a0001c0001t0018g0180 a0001c0001t0019g0082 a0001c0001t0020g0161 a0001c0001t0021g0033 a0001c0001t0024g0234 a0001c0001t0025g0247 a0001c0003t0012g0035 a0001c0003t0012g0036 a0001c0004t0005g0174 a0001c0004t0005g0175 a0001c0004t0005g0176 a0001c0004t0005g0177 a0001c0004t0005g0178 a0002c0005t0005g0302 a0002c0005t0005g0304 a0003c0009t0004g0245	305	404	0.7550	17	c.55 others(28): Show c.5509_*5510insTTATCTGGAAGGGGAAT	CCNT2	ENSG00000082258.13	transcript	ENST00000264157.10	protein_coding		816		chr2	TogoVar
CCNYL1_chr2_207706640_207761174	207708084	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02451.hp1 HG03471.hp1 HG02451.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0009 a0001c0001t0001g0009	2	354	0.0057	17	c.-38 others(28): Show c.-3813_-3812insTTTTTTTTTTTTTTTTT	CCNYL1	ENSG00000163249.13	transcript	ENST00000295414.8	protein_coding		3555		chr2	TogoVar
CCNY_chr10_35331509_35577667	35465905	A A	AGAGAGAG others(10): Show AGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	NA19058.hp2 NA19058.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0111 a0001c0001t0002g0111	1	296	0.0034	17	c.155 others(36): Show c.155-17499_155-17498insGAGAGAGAGAGAGAGAG	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9			chr10	TogoVar
CCNY_chr10_35331509_35577667	35516661	C C	CTTCCTTT others(10): Show CTTCCTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01169.hp1 NA18946.hp2 HG01167.hp1 HG01169.hp1 NA18946.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0010 a0001c0001t0002 a0001c0001t0010	a0001c0001t0002g0023 a0001c0001t0010g0002 a0001c0001t0010g0007 a0001c0001t0002g0023 a0001c0001t0010g0002 a0001c0001t0010g0007	3	296	0.0101	17	c.365 others(30): Show c.365+40_365+41insCCTTTTTTTTTTTTTTT	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	4/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35573215	C C	CTTGTCTC others(10): Show CTTGTCTCAGCCTCCCTG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19083.hp2 NA19083.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0013 a0001c0002t0013	a0001c0002t0013g0268 a0001c0002t0013g0268	1	296	0.0034	17	c.40 others(28): Show c.4045_*4046insTTGTCTCAGCCTCCCTG	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding		549		chr10	TogoVar

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