Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
CSTPP1_chr11_46931761_47167247	47101164	A A	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0184 a0001c0001t0001g0184	1	224	0.0045	17	c.281 others(36): Show c.281-36472_281-36456dupTTTTTTTTTTTTTTTTT		CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	3/8					INFO_REALIGN_3_PRIME	chr11	TogoVar
CSTPP1_chr11_46931761_47167247	47122091	A A	AAAAAAAA others(10): Show AAAAAAAAAAAAAAATAT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00438.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0047 a0001c0001t0001g0047	1	224	0.0045	17	c.281 others(36): Show c.281-15553_281-15552insAAAAAAAAAAAAATATA		CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	3/8					INFO_REALIGN_3_PRIME	chr11	TogoVar
CSTPP1_chr11_46931761_47167247	47122091	A A	AAAAATAT others(10): Show AAAAATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG01358.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0167 a0001c0001t0001g0167	1	224	0.0045	17	c.281 others(36): Show c.281-15553_281-15552insAAATATATATATATATA		CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	3/8					INFO_REALIGN_3_PRIME	chr11	TogoVar
CSTPP1_chr11_46931761_47167247	47122091	A A	ATATATAT others(10): Show ATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0141 a0001c0001t0001g0141	1	224	0.0045	17	c.281 others(36): Show c.281-15554_281-15553insTATATATATATATATAT		CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	3/8						chr11	TogoVar
CS_chr12_56266699_56305330	56303534	C C	CATTTTTT others(10): Show CATTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00423.hp1 HG00621.hp2 HG00673.hp1 others(56): Show HG00423.hp1 HG00621.hp2 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01175.hp1 HG01175.hp2 HG01243.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01516.hp2 HG01928.hp2 HG01975.hp1 HG01978.hp2 HG01993.hp2 HG02027.hp1 HG02056.hp2 HG02135.hp2 HG02148.hp2 HG02293.hp1 HG02559.hp1 HG02647.hp1 HG03130.hp1 HG03669.hp2 HG03704.hp1 HG03831.hp1 HG03831.hp2 HG03942.hp1 HG04184.hp2 NA18612.hp1 NA18942.hp2 NA18945.hp1 NA18952.hp1 NA18952.hp2 NA18959.hp2 NA18968.hp2 NA18985.hp2 NA19000.hp1 NA19000.hp2 NA19007.hp2 NA19012.hp2 NA19043.hp1 NA19058.hp1 NA19058.hp2 NA19072.hp1 NA19079.hp2 NA20129.hp1 NA20300.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(2): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0013 a0001c0003t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(53): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0034 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0055 a0001c0001t0001g0062 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0072 a0001c0001t0001g0074 a0001c0001t0001g0078 a0001c0001t0001g0084 a0001c0001t0001g0086 a0001c0001t0001g0091 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0102 a0001c0001t0001g0139 a0001c0001t0001g0142 a0001c0001t0001g0148 a0001c0001t0001g0150 a0001c0001t0001g0156 a0001c0001t0001g0169 a0001c0001t0001g0173 a0001c0001t0001g0176 a0001c0001t0001g0180 a0001c0001t0001g0183 a0001c0001t0001g0191 a0001c0001t0001g0194 a0001c0001t0001g0196 a0001c0001t0001g0210 a0001c0001t0001g0228 a0001c0001t0001g0236 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0244 a0001c0001t0001g0252 a0001c0001t0004g0211 a0001c0001t0004g0218 a0001c0001t0005g0087 a0001c0001t0013g0075 a0001c0003t0001g0175	59	316	0.1867	17	c.-33 others(28): Show c.-3334_-3333insAAAAAAAAAAAAAAAAT		CS	ENSG00000062485.19	transcript	ENST00000351328.8	protein_coding					3205		chr12	TogoVar
CS_chr12_56266699_56305330	56303535	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02055.hp2 HG02572.hp1 HG02965.hp2 others(3): Show HG02055.hp2 HG02572.hp1 HG02965.hp2 HG02970.hp2 HG03130.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0001 a0001c0001t0009	a0001c0001t0001g0021 a0001c0001t0001g0116 a0001c0001t0001g0124 others(3): Show a0001c0001t0001g0021 a0001c0001t0001g0116 a0001c0001t0001g0124 a0001c0001t0001g0129 a0001c0001t0001g0135 a0001c0001t0009g0117	6	316	0.0190	17	c.-33 others(28): Show c.-3335_-3334insAAAAAAAAAAAAAAAAA		CS	ENSG00000062485.19	transcript	ENST00000351328.8	protein_coding					3206		chr12	TogoVar
CT45A1_chrX_135708639_135728228	135715234	T T	TTATATAT others(10): Show TTATATATATAATACTTA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00438.hp1 HG00438.hp2 others(31): Show HG00140.hp1 HG00438.hp1 HG00438.hp2 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01106.hp1 HG01192.hp1 HG01255.hp1 HG01358.hp1 HG01928.hp1 HG02735.hp1 NA18747.hp1 NA18943.hp1 NA18945.hp1 NA18962.hp1 NA18973.hp1 NA18973.hp2 NA18978.hp1 NA18978.hp2 NA18983.hp1 NA18984.hp1 NA18985.hp1 NA18990.hp1 NA19000.hp1 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19079.hp1 NA19081.hp1 NA19081.hp2 NA19089.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0001 a0001c0001t0003 a0004c0004t0001 a0001c0001t0001 a0001c0001t0003 a0004c0004t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 others(20): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0003g0007 a0004c0004t0001g0036	34	57	0.5965	17	c.-7+ others(32): Show c.-7+1587_-7+1603dupTAATACTTATATATATA		CT45A1	ENSG00000268940.6	transcript	ENST00000594565.6	protein_coding	1/4					INFO_REALIGN_3_PRIME	chrX	TogoVar
CT45A1_chrX_135708639_135728228	135715283	T T	TTATATAT others(10): Show TTATATATATATAATACT	intron_variant intron_variant	MODIFIER	NA19072.hp1 NA19072.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	1	57	0.0175	17	c.-7+ others(32): Show c.-7+1587_-7+1603dupTAATACTTATATATATA		CT45A1	ENSG00000268940.6	transcript	ENST00000594565.6	protein_coding	1/4					INFO_REALIGN_3_PRIME	chrX	TogoVar
CT45A1_chrX_135708639_135728228	135723962	C C	CATATATG others(10): Show CATATATGGTGTGTATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00621.hp1 HG01943.hp1 HG02056.hp1 others(12): Show HG00621.hp1 HG01943.hp1 HG02056.hp1 HG02132.hp1 HG02572.hp1 HG02717.hp1 HG02818.hp2 HG03098.hp1 HG03130.hp1 HG03688.hp1 NA18940.hp1 NA18948.hp1 NA18966.hp1 NA19012.hp1 NA19085.hp1	a0002 a0003 a0005 a0002 a0003 a0005	a0002c0002 a0003c0005 a0005c0003 a0002c0002 a0003c0005 a0005c0003	a0002c0002t0002 a0003c0005t0002 a0005c0003t0002 a0002c0002t0002 a0003c0005t0002 a0005c0003t0002	a0002c0002t0002g0003 a0002c0002t0002g0006 a0002c0002t0002g0016 others(9): Show a0002c0002t0002g0003 a0002c0002t0002g0006 a0002c0002t0002g0016 a0002c0002t0002g0017 a0002c0002t0002g0021 a0002c0002t0002g0023 a0002c0002t0002g0024 a0002c0002t0002g0025 a0002c0002t0002g0037 a0002c0002t0002g0038 a0003c0005t0002g0018 a0005c0003t0002g0022	15	57	0.2632	17	c.92 others(26): Show c.929_*930insATATATGGTGTGTATAT		CT45A1	ENSG00000268940.6	transcript	ENST00000594565.6	protein_coding					735		chrX	TogoVar
CT47A3_chrX_120967746_120981068	120975223	G G	GGGACGAC others(10): Show GGGACGACGCGGCCTCCT	frameshift_variant frameshift_variant	HIGH	HG00140.hp1 HG00140.hp1	a0012 a0012	a0012c0017 a0012c0017	a0012c0017t0008 a0012c0017t0008	a0012c0017t0008g0036 a0012c0017t0008g0036	1	201	0.0050	17	c.586 others(24): Show c.586_587insAGGAGGCCGCGTCGTCC	p.Pro others(5): Show p.Pro196fs	CT47A3	ENSG00000236126.3	transcript	ENST00000441330.3	protein_coding	1/3	845/1298	586/867	196/288			chrX	TogoVar
CTDP1_chr18_79674803_79759503	79696116	T T	TGAGGAGG others(10): Show TGAGGAGGGCGGCTGCAG	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0011 a0004c0004t0011	a0004c0004t0011g0333 a0004c0004t0011g0333	1	378	0.0027	17	c.492 others(30): Show c.492+55_492+71dupCGGCTGCAGGAGGAGGG		CTDP1	ENSG00000060069.18	transcript	ENST00000613122.5	protein_coding	3/12					INFO_REALIGN_3_PRIME	chr18	TogoVar
CTDP1_chr18_79674803_79759503	79730466	T T	TCATTCGA others(10): Show TCATTCGATATCAAAGGG	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(276): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00423.hp1 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01934.hp1 HG01934.hp2 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp2 HG03130.hp1 HG03130.hp2 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18747.hp1 NA18939.hp1 NA18940.hp2 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp2 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18950.hp2 NA18951.hp1 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18957.hp2 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18984.hp1 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18990.hp2 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18997.hp1 NA18997.hp2 NA18999.hp1 NA18999.hp2 NA19004.hp1 NA19004.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp2 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19081.hp2 NA19084.hp1 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(11): Show a0001 a0002 a0003 a0004 a0005 a0008 a0009 a0010 a0011 a0012 a0013 a0014 a0015 a0017	a0001c0001 a0001c0003 a0001c0007 others(35): Show a0001c0001 a0001c0003 a0001c0007 a0001c0008 a0001c0013 a0001c0014 a0001c0016 a0001c0017 a0001c0018 a0001c0020 a0001c0021 a0001c0022 a0001c0028 a0001c0029 a0001c0035 a0001c0036 a0001c0037 a0001c0041 a0001c0042 a0002c0002 a0002c0006 a0003c0005 a0003c0009 a0003c0012 a0003c0023 a0004c0004 a0005c0011 a0005c0015 a0005c0024 a0008c0025 a0009c0026 a0010c0030 a0011c0032 a0012c0033 a0013c0027 a0014c0034 a0015c0031 a0017c0040	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(49): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0017 a0001c0003t0001 a0001c0003t0002 a0001c0003t0010 a0001c0003t0014 a0001c0007t0003 a0001c0007t0012 a0001c0008t0001 a0001c0013t0001 a0001c0013t0015 a0001c0014t0001 a0001c0016t0001 a0001c0017t0003 a0001c0018t0001 a0001c0020t0001 a0001c0021t0007 a0001c0022t0001 a0001c0028t0001 a0001c0029t0001 a0001c0035t0002 a0001c0036t0001 a0001c0037t0001 a0001c0041t0013 a0001c0042t0001 a0002c0002t0001 a0002c0006t0001 a0003c0005t0002 a0003c0009t0002 a0003c0012t0002 a0003c0023t0003 a0004c0004t0001 a0004c0004t0003 a0004c0004t0009 a0004c0004t0011 a0005c0011t0005 a0005c0015t0005 a0005c0024t0001 a0008c0025t0001 a0009c0026t0001 a0010c0030t0001 a0011c0032t0001 a0012c0033t0002 a0013c0027t0001 a0014c0034t0002 a0015c0031t0004 a0017c0040t0001	a0001c0001t0001g0084 a0001c0001t0002g0001 a0001c0001t0002g0002 others(273): Show a0001c0001t0001g0084 a0001c0001t0002g0001 a0001c0001t0002g0002 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0020 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0093 a0001c0001t0002g0094 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0135 a0001c0001t0002g0136 a0001c0001t0002g0137 a0001c0001t0002g0138 a0001c0001t0002g0139 a0001c0001t0002g0140 a0001c0001t0002g0141 a0001c0001t0002g0142 a0001c0001t0002g0145 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0149 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0168 a0001c0001t0002g0169 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0176 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0179 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0182 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0187 a0001c0001t0002g0188 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0191 a0001c0001t0002g0192 a0001c0001t0002g0193 a0001c0001t0002g0194 a0001c0001t0002g0195 a0001c0001t0002g0206 a0001c0001t0002g0339 a0001c0001t0004g0143 a0001c0001t0004g0144 a0001c0001t0004g0150 a0001c0001t0004g0164 a0001c0001t0004g0184 a0001c0001t0006g0087 a0001c0001t0006g0088 a0001c0001t0006g0089 a0001c0001t0007g0342 a0001c0001t0007g0343 a0001c0001t0008g0097 a0001c0001t0008g0098 a0001c0001t0008g0101 a0001c0001t0017g0207 a0001c0003t0001g0003 a0001c0003t0001g0023 a0001c0003t0001g0024 a0001c0003t0001g0025 a0001c0003t0001g0026 a0001c0003t0001g0027 a0001c0003t0001g0028 a0001c0003t0001g0030 a0001c0003t0001g0031 a0001c0003t0001g0032 a0001c0003t0001g0033 a0001c0003t0001g0034 a0001c0003t0001g0035 a0001c0003t0001g0036 a0001c0003t0001g0038 a0001c0003t0001g0039 a0001c0003t0001g0040 a0001c0003t0001g0041 a0001c0003t0001g0042 a0001c0003t0001g0043 a0001c0003t0001g0045 a0001c0003t0001g0046 a0001c0003t0001g0047 a0001c0003t0001g0048 a0001c0003t0001g0050 a0001c0003t0001g0051 a0001c0003t0001g0052 a0001c0003t0001g0053 a0001c0003t0001g0054 a0001c0003t0001g0055 a0001c0003t0001g0056 a0001c0003t0001g0061 a0001c0003t0001g0062 a0001c0003t0001g0063 a0001c0003t0001g0064 a0001c0003t0001g0066 a0001c0003t0001g0067 a0001c0003t0001g0068 a0001c0003t0001g0069 a0001c0003t0001g0070 a0001c0003t0001g0071 a0001c0003t0001g0072 a0001c0003t0001g0073 a0001c0003t0001g0074 a0001c0003t0001g0075 a0001c0003t0001g0076 a0001c0003t0001g0077 a0001c0003t0001g0080 a0001c0003t0001g0081 a0001c0003t0001g0340 a0001c0003t0001g0372 a0001c0003t0001g0373 a0001c0003t0001g0374 a0001c0003t0002g0100 a0001c0003t0010g0044 a0001c0003t0014g0059 a0001c0007t0003g0004 a0001c0007t0003g0345 a0001c0007t0003g0346 a0001c0007t0003g0347 a0001c0007t0003g0348 a0001c0007t0003g0350 a0001c0007t0003g0351 a0001c0007t0003g0352 a0001c0007t0003g0354 a0001c0007t0003g0355 a0001c0007t0003g0356 a0001c0007t0003g0357 a0001c0007t0003g0358 a0001c0007t0003g0359 a0001c0007t0003g0360 a0001c0007t0003g0362 a0001c0007t0003g0363 a0001c0007t0003g0364 a0001c0007t0003g0365 a0001c0007t0012g0353 a0001c0008t0001g0010 a0001c0008t0001g0198 a0001c0008t0001g0199 a0001c0008t0001g0200 a0001c0008t0001g0201 a0001c0008t0001g0203 a0001c0008t0001g0204 a0001c0008t0001g0205 a0001c0013t0001g0091 a0001c0013t0001g0092 a0001c0013t0015g0197 a0001c0014t0001g0011 a0001c0014t0001g0012 a0001c0014t0001g0078 a0001c0016t0001g0057 a0001c0016t0001g0058 a0001c0017t0003g0014 a0001c0017t0003g0015 a0001c0018t0001g0085 a0001c0018t0001g0086 a0001c0020t0001g0349 a0001c0021t0007g0341 a0001c0022t0001g0344 a0001c0028t0001g0202 a0001c0029t0001g0029 a0001c0035t0002g0002 a0001c0036t0001g0013 a0001c0037t0001g0079 a0001c0041t0013g0096 a0001c0042t0001g0095 a0002c0002t0001g0090 a0002c0006t0001g0221 a0003c0005t0002g0005 a0003c0005t0002g0006 a0003c0005t0002g0007 a0003c0005t0002g0008 a0003c0005t0002g0099 a0003c0005t0002g0102 a0003c0005t0002g0103 a0003c0005t0002g0104 a0003c0005t0002g0110 a0003c0005t0002g0111 a0003c0005t0002g0112 a0003c0005t0002g0113 a0003c0005t0002g0114 a0003c0005t0002g0118 a0003c0005t0002g0119 a0003c0005t0002g0120 a0003c0005t0002g0121 a0003c0005t0002g0123 a0003c0005t0002g0125 a0003c0005t0002g0126 a0003c0005t0002g0127 a0003c0005t0002g0128 a0003c0005t0002g0129 a0003c0005t0002g0130 a0003c0005t0002g0133 a0003c0005t0002g0134 a0003c0009t0002g0108 a0003c0009t0002g0109 a0003c0009t0002g0115 a0003c0009t0002g0116 a0003c0009t0002g0117 a0003c0009t0002g0124 a0003c0012t0002g0105 a0003c0012t0002g0106 a0003c0012t0002g0107 a0003c0023t0003g0361 a0004c0004t0001g0305 a0004c0004t0001g0306 a0004c0004t0001g0307 a0004c0004t0001g0308 a0004c0004t0001g0309 a0004c0004t0001g0310 a0004c0004t0001g0311 a0004c0004t0001g0312 a0004c0004t0001g0314 a0004c0004t0001g0315 a0004c0004t0001g0318 a0004c0004t0001g0319 a0004c0004t0001g0320 a0004c0004t0001g0321 a0004c0004t0001g0322 a0004c0004t0001g0323 a0004c0004t0001g0324 a0004c0004t0001g0325 a0004c0004t0001g0327 a0004c0004t0001g0328 a0004c0004t0001g0330 a0004c0004t0003g0313 a0004c0004t0003g0316 a0004c0004t0003g0317 a0004c0004t0003g0331 a0004c0004t0003g0332 a0004c0004t0003g0334 a0004c0004t0003g0335 a0004c0004t0003g0336 a0004c0004t0003g0337 a0004c0004t0003g0338 a0004c0004t0009g0326 a0004c0004t0011g0333 a0005c0011t0005g0367 a0005c0011t0005g0368 a0005c0011t0005g0370 a0005c0015t0005g0366 a0005c0015t0005g0369 a0005c0024t0001g0371 a0008c0025t0001g0065 a0009c0026t0001g0060 a0010c0030t0001g0082 a0011c0032t0001g0083 a0012c0033t0002g0146 a0013c0027t0001g0037 a0014c0034t0002g0122 a0015c0031t0004g0196 a0017c0040t0001g0256	279	378	0.7381	17	c.258 others(36): Show c.2580+1397_2580+1398insCATTCGATATCAAAGGG		CTDP1	ENSG00000060069.18	transcript	ENST00000613122.5	protein_coding	11/12						chr18	TogoVar
CTDP1_chr18_79674803_79759503	79732895	A A	AGTGCTCC others(10): Show AGTGCTCCCAAAATCACC	intron_variant intron_variant	MODIFIER	NA18965.hp2 NA19091.hp2 NA18965.hp2 NA19091.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0048 a0001c0003t0001g0052 a0001c0003t0001g0048 a0001c0003t0001g0052	2	378	0.0053	17	c.258 others(36): Show c.2581-3459_2581-3443dupGTGCTCCCAAAATCACC		CTDP1	ENSG00000060069.18	transcript	ENST00000613122.5	protein_coding	11/12					INFO_REALIGN_3_PRIME	chr18	TogoVar
CTDSP2_chr12_57814927_57851729	57818182	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19085.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0032 a0001c0001t0001g0032	1	346	0.0029	17	c.54 others(28): Show c.5403_*5419dupAAAAAAAAAAAAAAAAA		CTDSP2	ENSG00000175215.11	transcript	ENST00000398073.7	protein_coding					1744		chr12	TogoVar
CTDSPL2_chr15_44422629_44534038	44506025	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG03209.hp1 HG03225.hp1 others(2): Show HG02965.hp2 HG03209.hp1 HG03225.hp1 NA19064.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0005 a0001c0001t0003g0020 a0001c0001t0003g0021 others(2): Show a0001c0001t0003g0005 a0001c0001t0003g0020 a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0003g0023	5	234	0.0214	17	c.969 others(34): Show c.969+6218_969+6234dupTTTTTTTTTTTTTTTTT		CTDSPL2	ENSG00000137770.14	transcript	ENST00000260327.9	protein_coding	8/12					INFO_REALIGN_3_PRIME	chr15	TogoVar
CTDSPL2_chr15_44422629_44534038	44506412	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18966.hp2 NA18966.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0045 a0001c0002t0005g0045	1	234	0.0043	17	c.969 others(34): Show c.969+6604_969+6620dupTTTTTTTTTTTTTTTTT		CTDSPL2	ENSG00000137770.14	transcript	ENST00000260327.9	protein_coding	8/12					INFO_REALIGN_3_PRIME	chr15	TogoVar
CTDSPL2_chr15_44422629_44534038	44521937	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0053 a0001c0001t0011g0053	1	234	0.0043	17	c.133 others(34): Show c.1335+541_1335+557dupAAAAAAAAAAAAAAAAA		CTDSPL2	ENSG00000137770.14	transcript	ENST00000260327.9	protein_coding	12/12					INFO_REALIGN_3_PRIME	chr15	TogoVar
CTIF_chr18_48534031_48868217	48568633	T T	TAAAAAAA others(10): Show TAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02080.hp2 HG06807.hp1 NA20905.hp1 HG02080.hp2 HG06807.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0011 a0001c0001 a0001c0011	a0001c0001t0001 a0001c0001t0005 a0001c0011t0013 a0001c0001t0001 a0001c0001t0005 a0001c0011t0013	a0001c0001t0001g0088 a0001c0001t0005g0109 a0001c0011t0013g0086 a0001c0001t0001g0088 a0001c0001t0005g0109 a0001c0011t0013g0086	3	144	0.0208	17	c.-29 others(36): Show c.-29+29340_-29+29356dupAAAAAAAAAAAAAAAAA		CTIF	ENSG00000134030.14	transcript	ENST00000256413.8	protein_coding	1/11					INFO_REALIGN_3_PRIME	chr18	TogoVar
CTIF_chr18_48534031_48868217	48772470	C C	CATAACTC others(10): Show CATAACTCCCCTACAGCA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00735.hp1 HG01069.hp2 others(33): Show HG00639.hp1 HG00735.hp1 HG01069.hp2 HG01109.hp1 HG01109.hp2 HG02109.hp2 HG02257.hp2 HG02451.hp1 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02895.hp2 HG02896.hp2 HG02897.hp1 HG02965.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp1 HG03486.hp1 HG03654.hp2 HG03710.hp1 HG04115.hp2 NA18906.hp1 NA18906.hp2 NA19011.hp2 NA19030.hp2 NA19043.hp1 NA19240.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0002 a0001c0009 others(2): Show a0001c0001 a0001c0002 a0001c0009 a0002c0004 a0004c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(21): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0012 a0001c0001t0015 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0023 a0001c0001t0026 a0001c0001t0027 a0001c0001t0035 a0001c0001t0051 a0001c0002t0025 a0001c0009t0041 a0002c0004t0010 a0002c0004t0016 a0004c0008t0006	a0001c0001t0001g0017 a0001c0001t0001g0075 a0001c0001t0001g0077 others(33): Show a0001c0001t0001g0017 a0001c0001t0001g0075 a0001c0001t0001g0077 a0001c0001t0001g0105 a0001c0001t0002g0042 a0001c0001t0002g0137 a0001c0001t0003g0029 a0001c0001t0003g0118 a0001c0001t0004g0024 a0001c0001t0004g0026 a0001c0001t0004g0059 a0001c0001t0004g0070 a0001c0001t0005g0006 a0001c0001t0006g0001 a0001c0001t0007g0040 a0001c0001t0008g0139 a0001c0001t0012g0090 a0001c0001t0015g0083 a0001c0001t0015g0135 a0001c0001t0017g0100 a0001c0001t0018g0065 a0001c0001t0019g0132 a0001c0001t0020g0020 a0001c0001t0020g0057 a0001c0001t0023g0051 a0001c0001t0026g0061 a0001c0001t0026g0125 a0001c0001t0027g0028 a0001c0001t0027g0034 a0001c0001t0035g0058 a0001c0001t0051g0005 a0001c0002t0025g0130 a0001c0009t0041g0131 a0002c0004t0010g0085 a0002c0004t0016g0041 a0004c0008t0006g0045	36	144	0.2500	17	c.137 others(38): Show c.1371+10818_1371+10834dupAACTCCCCTACAGCAAT		CTIF	ENSG00000134030.14	transcript	ENST00000256413.8	protein_coding	9/11					INFO_REALIGN_3_PRIME	chr18	TogoVar
CTNNA1_chr5_138748425_138940034	138825482	G G	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01167.hp2 HG01943.hp2 others(13): Show HG00423.hp2 HG01167.hp2 HG01943.hp2 HG02132.hp2 HG02280.hp2 HG02630.hp1 HG02809.hp2 NA18522.hp1 NA18906.hp1 NA18946.hp1 NA18948.hp1 NA18983.hp1 NA18986.hp1 NA19002.hp2 NA19003.hp2 NA19043.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0004c0010 a0001c0001 a0001c0002 a0004c0010	a0001c0001t0001 a0001c0002t0003 a0004c0010t0001 a0001c0001t0001 a0001c0002t0003 a0004c0010t0001	a0001c0001t0001g0038 a0001c0001t0001g0086 a0001c0001t0001g0089 others(13): Show a0001c0001t0001g0038 a0001c0001t0001g0086 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0105 a0001c0001t0001g0127 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0152 a0001c0002t0003g0048 a0004c0010t0001g0169	16	180	0.0889	17	c.858 others(32): Show c.858+699_858+700insTTTTTTTTTTTTTTTTT		CTNNA1	ENSG00000044115.21	transcript	ENST00000302763.12	protein_coding	6/17					INFO_REALIGN_3_PRIME	chr5	TogoVar
CTNNA1_chr5_138748425_138940034	138905111	A A	AAATACAT others(10): Show AAATACATACATACATAC	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02809.hp1 HG02818.hp1 others(2): Show HG02486.hp2 HG02809.hp1 HG02818.hp1 HG03225.hp2 NA18906.hp2	a0001 a0001	a0001c0002 a0001c0004 a0001c0009 others(1): Show a0001c0002 a0001c0004 a0001c0009 a0001c0013	a0001c0002t0008 a0001c0004t0004 a0001c0009t0004 others(1): Show a0001c0002t0008 a0001c0004t0004 a0001c0009t0004 a0001c0013t0003	a0001c0002t0008g0028 a0001c0004t0004g0005 a0001c0004t0004g0180 others(2): Show a0001c0002t0008g0028 a0001c0004t0004g0005 a0001c0004t0004g0180 a0001c0009t0004g0006 a0001c0013t0003g0031	5	180	0.0278	17	c.138 others(34): Show c.1389+671_1389+672insATACATACATACATACA		CTNNA1	ENSG00000044115.21	transcript	ENST00000302763.12	protein_coding	10/17					INFO_REALIGN_3_PRIME	chr5	TogoVar
CTNNA1_chr5_138748425_138940034	138905111	A A	ACATACAT others(10): Show ACATACATACATACATAC	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0004 a0001c0004t0004	a0001c0004t0004g0007 a0001c0004t0004g0007	1	180	0.0056	17	c.138 others(34): Show c.1389+670_1389+671insCATACATACATACATAC		CTNNA1	ENSG00000044115.21	transcript	ENST00000302763.12	protein_coding	10/17						chr5	TogoVar
CTNNA1_chr5_138748425_138940034	138935340	T T	TCAGCATA others(10): Show TCAGCATATCCCTTCTGC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0092 a0001c0001t0001g0092	1	180	0.0056	17	c.12 others(28): Show c.1251_*1252insCAGCATATCCCTTCTGC		CTNNA1	ENSG00000044115.21	transcript	ENST00000302763.12	protein_coding					307		chr5	TogoVar
CTNNA2_chr2_79508051_80653780	79536602	T T	TGTGTGTG others(10): Show TGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0050 a0001c0001t0001g0050	1	68	0.0147	17	c.-6+ others(34): Show c.-6+23395_-6+23396insGTGTGTGTGTGTGTGTG		CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	1/18						chr2	TogoVar
CTNNA2_chr2_79508051_80653780	79956843	G G	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0036 a0001c0002t0003g0036	1	68	0.0147	17	c.105 others(38): Show c.1056+47055_1056+47071dupTTTTTTTTTTTTTTTTT		CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	7/18					INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	79982231	T T	TGTACACA others(10): Show TGTACACACACACATAAC	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0068 a0001c0007t0001g0068	1	68	0.0147	17	c.105 others(38): Show c.1056+72434_1056+72435insGTACACACACACATAAC		CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	7/18						chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80591457	G G	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00735.hp2 HG01106.hp1 others(3): Show HG00642.hp1 HG00735.hp2 HG01106.hp1 HG02148.hp2 HG02809.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0002 a0001c0002t0002 a0001c0005t0002 a0001c0001t0002 a0001c0002t0002 a0001c0005t0002	a0001c0001t0002g0029 a0001c0001t0002g0041 a0001c0001t0002g0057 others(3): Show a0001c0001t0002g0029 a0001c0001t0002g0041 a0001c0001t0002g0057 a0001c0002t0002g0015 a0001c0005t0002g0043 a0001c0005t0002g0063	6	68	0.0882	17	c.218 others(36): Show c.2189+1977_2189+1993dupTTTTTTTTTTTTTTTTT		CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	15/18					INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA3_chr10_65907523_67701195	66021852	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0030 a0001c0001t0020g0030	1	46	0.0217	17	c.216 others(38): Show c.2160-33056_2160-33055insAAAAAAAAAAAAAAAAA		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	15/17						chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66024085	A A	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG03579.hp2 HG02717.hp1 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0019 a0001c0004t0007 a0001c0001t0019 a0001c0004t0007	a0001c0001t0019g0019 a0001c0004t0007g0005 a0001c0001t0019g0019 a0001c0004t0007g0005	2	46	0.0435	17	c.216 others(38): Show c.2160-35305_2160-35289dupAAAAAAAAAAAAAAAAA		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	15/17						chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66332411	A A	ATACGTCC others(10): Show ATACGTCCCATCAATACC	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01081.hp2 HG01243.hp1 others(30): Show HG01070.hp2 HG01081.hp2 HG01243.hp1 HG02145.hp1 HG02145.hp2 HG02280.hp1 HG02622.hp1 HG02622.hp2 HG02647.hp2 HG02717.hp1 HG02717.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG06807.hp1 NA18612.hp1 NA18960.hp2 NA18964.hp1 NA18964.hp2 NA19080.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0005	a0001c0001 a0001c0003 a0001c0004 others(6): Show a0001c0001 a0001c0003 a0001c0004 a0001c0005 a0001c0011 a0002c0002 a0003c0009 a0004c0008 a0005c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(26): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012 a0001c0001t0019 a0001c0001t0020 a0001c0001t0025 a0001c0003t0008 a0001c0003t0011 a0001c0003t0014 a0001c0003t0022 a0001c0004t0001 a0001c0004t0007 a0001c0005t0010 a0001c0011t0009 a0002c0002t0001 a0002c0002t0003 a0002c0002t0004 a0002c0002t0013 a0002c0002t0017 a0003c0009t0003 a0004c0008t0005 a0005c0010t0002	a0001c0001t0001g0015 a0001c0001t0002g0009 a0001c0001t0002g0024 others(30): Show a0001c0001t0001g0015 a0001c0001t0002g0009 a0001c0001t0002g0024 a0001c0001t0003g0023 a0001c0001t0004g0041 a0001c0001t0005g0010 a0001c0001t0006g0007 a0001c0001t0006g0008 a0001c0001t0006g0027 a0001c0001t0007g0020 a0001c0001t0008g0004 a0001c0001t0009g0031 a0001c0001t0012g0038 a0001c0001t0019g0019 a0001c0001t0020g0030 a0001c0001t0025g0045 a0001c0003t0008g0002 a0001c0003t0011g0032 a0001c0003t0014g0025 a0001c0003t0022g0022 a0001c0004t0001g0018 a0001c0004t0007g0005 a0001c0005t0010g0029 a0001c0005t0010g0034 a0001c0011t0009g0017 a0002c0002t0001g0035 a0002c0002t0003g0042 a0002c0002t0004g0028 a0002c0002t0013g0026 a0002c0002t0017g0040 a0003c0009t0003g0036 a0004c0008t0005g0033 a0005c0010t0002g0021	33	46	0.7174	17	c.173 others(38): Show c.1732+46740_1732+46741insGGTATTGATGGGACGTA		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	12/17						chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66332411	A A	ATACGTTC others(10): Show ATACGTTCCATCAATACC	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01081.hp1 HG01243.hp2 others(9): Show HG01070.hp1 HG01081.hp1 HG01243.hp2 HG02280.hp2 HG02647.hp1 HG03130.hp1 HG03130.hp2 HG03195.hp1 HG06807.hp2 NA18612.hp2 NA18960.hp1 NA19080.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0006 a0001c0007 others(1): Show a0001c0001 a0001c0006 a0001c0007 a0002c0002	a0001c0001t0001 a0001c0001t0004 a0001c0001t0016 others(9): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0016 a0001c0001t0021 a0001c0001t0023 a0001c0001t0024 a0001c0006t0001 a0001c0007t0015 a0002c0002t0002 a0002c0002t0003 a0002c0002t0005 a0002c0002t0026	a0001c0001t0001g0006 a0001c0001t0004g0043 a0001c0001t0016g0003 others(9): Show a0001c0001t0001g0006 a0001c0001t0004g0043 a0001c0001t0016g0003 a0001c0001t0021g0012 a0001c0001t0023g0011 a0001c0001t0024g0044 a0001c0006t0001g0001 a0001c0007t0015g0016 a0002c0002t0002g0013 a0002c0002t0003g0039 a0002c0002t0005g0014 a0002c0002t0026g0046	12	46	0.2609	17	c.173 others(38): Show c.1732+46740_1732+46741insGGTATTGATGGAACGTA		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	12/17						chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66547343	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02280.hp2 NA19080.hp2 HG02280.hp2 NA19080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0016 a0001c0001t0004 a0001c0001t0016	a0001c0001t0004g0041 a0001c0001t0016g0003 a0001c0001t0004g0041 a0001c0001t0016g0003	2	46	0.0435	17	c.137 others(38): Show c.1375-26571_1375-26570insAAAAAAAAAAAAAAAAA		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	10/17						chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66845703	C C	CAAAAAAA others(10): Show CAAAAAAATAAATAAATA	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0028 a0002c0002t0004g0028	1	46	0.0217	17	c.104 others(38): Show c.1048-70180_1048-70179insTATTTATTTATTTTTTT		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	7/17						chr10	TogoVar
CTNNA3_chr10_65907523_67701195	67005682	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0015 a0001c0001t0001g0015	1	46	0.0217	17	c.104 others(40): Show c.1047+174618_1047+174634dupAAAAAAAAAAAAAAAAA		CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	7/17						chr10	TogoVar
CTNND2_chr5_10966836_11909446	11240386	T T	TCAAACAC others(10): Show TCAAACACACACCCAACA	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp2 HG02258.hp1 others(18): Show HG00738.hp1 HG00738.hp2 HG02258.hp1 HG02647.hp1 HG02647.hp2 HG02922.hp1 HG02922.hp2 HG03130.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 NA18522.hp1 NA18522.hp2 NA19043.hp1 NA19068.hp1 NA19068.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(6): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0009 a0002c0008	a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 others(6): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 a0001c0004t0001 a0001c0005t0001 a0001c0006t0002 a0001c0007t0001 a0001c0009t0001 a0002c0008t0001	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0009 others(18): Show a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0002t0001g0001 a0001c0002t0001g0015 a0001c0003t0001g0007 a0001c0004t0001g0019 a0001c0005t0001g0020 a0001c0006t0002g0025 a0001c0007t0001g0002 a0001c0009t0001g0008 a0002c0008t0001g0014	21	26	0.8077	17	c.162 others(36): Show c.1629-3564_1629-3563insTGTTGGGTGTGTGTTTG		CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	9/21						chr5	TogoVar
CTNS_chr17_3631760_3668103	3635230	G G	GAAGGAAG others(10): Show GAAGGAAGGAAGGAAGGA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19091.hp2 NA19091.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0012 a0002c0002t0012	a0002c0002t0012g0288 a0002c0002t0012g0288	1	372	0.0027	17	c.-18 others(28): Show c.-1831_-1830insAAGGAAGGAAGGAAGGA		CTNS	ENSG00000040531.16	transcript	ENST00000046640.9	protein_coding					1529		chr17	TogoVar
CTNS_chr17_3631760_3668103	3635240	A A	AGGAAGGA others(10): Show AGGAAGGAAGGAAGGAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00673.hp1 HG00735.hp1 HG01081.hp1 others(20): Show HG00673.hp1 HG00735.hp1 HG01081.hp1 HG01123.hp1 HG01496.hp2 HG01952.hp2 HG02004.hp1 HG02004.hp2 HG02056.hp1 HG02071.hp2 HG02273.hp1 HG02300.hp2 HG02886.hp2 NA18950.hp1 NA18974.hp2 NA18977.hp2 NA18984.hp1 NA19000.hp2 NA19005.hp2 NA19067.hp2 NA19087.hp2 NA19090.hp2 NA19091.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0010 a0001c0001 a0006c0010	a0001c0001t0001 a0001c0001t0021 a0001c0001t0029 others(3): Show a0001c0001t0001 a0001c0001t0021 a0001c0001t0029 a0001c0001t0084 a0001c0001t0089 a0006c0010t0001	a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0127 others(20): Show a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0127 a0001c0001t0001g0131 a0001c0001t0001g0134 a0001c0001t0001g0142 a0001c0001t0001g0144 a0001c0001t0001g0153 a0001c0001t0001g0155 a0001c0001t0001g0157 a0001c0001t0001g0168 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0190 a0001c0001t0001g0193 a0001c0001t0021g0132 a0001c0001t0029g0027 a0001c0001t0084g0147 a0001c0001t0089g0133 a0006c0010t0001g0139	23	372	0.0618	17	c.-18 others(28): Show c.-1821_-1820insGGAAGGAAGGAAGGAAG		CTNS	ENSG00000040531.16	transcript	ENST00000046640.9	protein_coding					1519		chr17	TogoVar
CTNS_chr17_3631760_3668103	3641384	A A	ATATATAT others(10): Show ATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18947.hp2 NA19087.hp1 NA18947.hp2 NA19087.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0034 a0001c0001t0001 a0002c0002t0034	a0001c0001t0001g0196 a0002c0002t0034g0286 a0001c0001t0001g0196 a0002c0002t0034g0286	2	372	0.0054	17	c.61+ others(32): Show c.61+1118_61+1119insATATATATATATATATT		CTNS	ENSG00000040531.16	transcript	ENST00000046640.9	protein_coding	3/11					INFO_REALIGN_3_PRIME	chr17	TogoVar
CTNS_chr17_3631760_3668103	3641384	A A	ATATATAT others(10): Show ATATATATATATTTTTTT	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG03579.hp1 HG02622.hp2 HG03579.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0264 a0002c0002t0004g0302 a0002c0002t0004g0264 a0002c0002t0004g0302	2	372	0.0054	17	c.61+ others(32): Show c.61+1118_61+1119insATATATATATTTTTTTT		CTNS	ENSG00000040531.16	transcript	ENST00000046640.9	protein_coding	3/11					INFO_REALIGN_3_PRIME	chr17	TogoVar
CTNS_chr17_3631760_3668103	3641385	T T	TATATATA others(10): Show TATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG02698.hp1 HG03492.hp2 others(10): Show HG00621.hp1 HG02698.hp1 HG03492.hp2 NA18943.hp2 NA18945.hp2 NA18970.hp2 NA18974.hp2 NA18977.hp2 NA18984.hp1 NA18989.hp2 NA19067.hp2 NA19087.hp2 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0033 a0001c0001t0087 others(3): Show a0001c0001t0001 a0001c0001t0033 a0001c0001t0087 a0001c0001t0089 a0001c0001t0090 a0002c0002t0019	a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0153 others(10): Show a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0172 a0001c0001t0001g0174 a0001c0001t0001g0176 a0001c0001t0033g0173 a0001c0001t0087g0177 a0001c0001t0089g0133 a0001c0001t0090g0175 a0002c0002t0019g0285	13	372	0.0350	17	c.61+ others(32): Show c.61+1118_61+1119insATATATATATATATATA		CTNS	ENSG00000040531.16	transcript	ENST00000046640.9	protein_coding	3/11						chr17	TogoVar
CTNS_chr17_3631760_3668103	3658602	A A	ACTCAGGG others(10): Show ACTCAGGGTCCAGCACAT	intron_variant intron_variant	MODIFIER	NA18997.hp2 NA18997.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0092 a0001c0001t0092	a0001c0001t0092g0227 a0001c0001t0092g0227	1	372	0.0027	17	c.852 others(32): Show c.852+430_852+446dupCAGGGTCCAGCACATCT		CTNS	ENSG00000040531.16	transcript	ENST00000046640.9	protein_coding	10/11					INFO_REALIGN_3_PRIME	chr17	TogoVar
CTPS2_chrX_16582999_16717669	16639777	A A	AAAAAGAA others(10): Show AAAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0161 a0001c0001t0002g0161	1	226	0.0044	17	c.129 others(34): Show c.1297-535_1297-534insCTTTCTTTCTTTCTTTT		CTPS2	ENSG00000047230.15	transcript	ENST00000359276.9	protein_coding	13/18						chrX	TogoVar
CTSB_chr8_11837524_11873087	11869602	A A	AAAAAAAA others(10): Show AAAAAAAAAAAAAAAAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0003 a0003	a0003c0008 a0003c0008	a0003c0008t0020 a0003c0008t0020	a0003c0008t0020g0015 a0003c0008t0020g0015	1	438	0.0023	17	c.-16 others(28): Show c.-1628_-1627insCTTTTTTTTTTTTTTTT		CTSB	ENSG00000164733.23	transcript	ENST00000353047.11	protein_coding					1516		chr8	TogoVar
CTSC_chr11_88288592_88342736	88291330	G G	GGAAGGAA others(10): Show GGAAGGAAGGAGAAGGAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp1 HG02451.hp1 HG03139.hp2 HG01243.hp1 HG02451.hp1 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0273 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0273	3	434	0.0069	17	c.26 others(28): Show c.2659_*2675dupTTCCTTCTCCTTCCTTC		CTSC	ENSG00000109861.17	transcript	ENST00000227266.10	protein_coding					2261		chr11	TogoVar
CTSD_chr11_1747755_1768927	1754533	A A	AGGGATGG others(10): Show AGGGATGGAGGGATGGAG	intron_variant intron_variant	MODIFIER	HG02886.hp1 NA18974.hp2 HG02886.hp1 NA18974.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0100 a0001c0001t0001g0144 a0001c0001t0001g0100 a0001c0001t0001g0144	2	386	0.0052	17	c.827 others(32): Show c.827+356_827+372dupCTCCATCCCTCCATCCC		CTSD	ENSG00000117984.15	transcript	ENST00000236671.7	protein_coding	6/8						chr11	TogoVar
CTSF_chr11_66558464_66573606	66571636	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02258.hp1 HG02647.hp2 HG03453.hp2 others(1): Show HG02258.hp1 HG02647.hp2 HG03453.hp2 HG03540.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0005 a0001c0002 a0002c0005	a0001c0002t0002 a0002c0005t0002 a0001c0002t0002 a0002c0005t0002	a0001c0002t0002g0003 a0002c0005t0002g0009 a0001c0002t0002g0003 a0002c0005t0002g0009	4	412	0.0097	17	c.-31 others(28): Show c.-3151_-3150insTTTTTTTTTTTTTTTTT		CTSF	ENSG00000174080.12	transcript	ENST00000310325.10	protein_coding					3031		chr11	TogoVar
CTSH_chr15_78916058_78950046	78924101	G G	GGGGGGGG others(10): Show GGGGGGGGAGGGTGGGCA	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0103 a0001c0002t0001g0103	1	414	0.0024	17	c.807 others(32): Show c.807-984_807-983insTGCCCACCCTCCCCCCC		CTSH	ENSG00000103811.18	transcript	ENST00000220166.10	protein_coding	10/11						chr15	TogoVar
CTSK_chr1_150791208_150813260	150807005	T T	TCTCTCTC others(10): Show TCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	NA19006.hp2 NA19006.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0176 a0001c0001t0001g0176	1	392	0.0026	17	c.-1- others(30): Show c.-1-200_-1-199insGAGAGAGAGAGAGAGAG		CTSK	ENSG00000143387.14	transcript	ENST00000271651.8	protein_coding	1/7						chr1	TogoVar
CTTNBP2NL_chr1_112391214_112466164	112449753	T T	TGTGTGTG others(10): Show TGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01891.hp2 HG02145.hp2 others(5): Show HG01884.hp1 HG01891.hp2 HG02145.hp2 HG02818.hp1 HG02895.hp2 HG02897.hp2 HG03098.hp2 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0006 a0001c0001t0019 a0001c0007t0014 a0001c0001t0006 a0001c0001t0019 a0001c0007t0014	a0001c0001t0006g0305 a0001c0001t0006g0307 a0001c0001t0006g0309 others(5): Show a0001c0001t0006g0305 a0001c0001t0006g0307 a0001c0001t0006g0309 a0001c0001t0006g0310 a0001c0001t0006g0311 a0001c0001t0019g0261 a0001c0007t0014g0128 a0001c0007t0014g0129	8	324	0.0247	17	c.330 others(32): Show c.330+581_330+582insGTGTGTGTGTGTGTGTG		CTTNBP2NL	ENSG00000143079.15	transcript	ENST00000271277.11	protein_coding	4/5						chr1	TogoVar
CTTNBP2NL_chr1_112391214_112466164	112452645	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03195.hp2 NA18906.hp2 HG03195.hp2 NA18906.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0008 a0001c0005t0008	a0001c0005t0008g0132 a0001c0005t0008g0133 a0001c0005t0008g0132 a0001c0005t0008g0133	2	324	0.0062	17	c.331 others(34): Show c.331-1791_331-1790insTTTTTTTTTTTTTTTTT		CTTNBP2NL	ENSG00000143079.15	transcript	ENST00000271277.11	protein_coding	4/5					INFO_REALIGN_3_PRIME	chr1	TogoVar

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