Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GABRB3_chr15_26538552_26778066	26635010	A A	ATATATAT others(10): Show ATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG02300.hp2 NA19088.hp2 HG00280.hp1 HG02300.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0183 a0001c0001t0002g0037 a0001c0001t0002g0105 a0001c0001t0001g0183 a0001c0001t0002g0037 a0001c0001t0002g0105	3	204	0.0147	17	c.241 others(36): Show c.241-13477_241-13476insATATATATATATATATA	GABRB3	ENSG00000166206.16	transcript	ENST00000311550.10	protein_coding	3/8			chr15	TogoVar
GABRG3_chr15_26966181_27546984	27001888	G G	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0002 a0001c0004t0002	a0001c0004t0002g0061 a0001c0004t0002g0061	1	92	0.0109	17	c.202 others(36): Show c.202+24753_202+24754insTTTTTTTTTTTTTTTTT	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27062434	T T	TAAAAAAA others(10): Show TAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03209.hp2 NA19240.hp2 HG03098.hp2 HG03209.hp2 NA19240.hp2	a0001 a0001	a0001c0004 a0001c0005 a0001c0009 a0001c0004 a0001c0005 a0001c0009	a0001c0004t0030 a0001c0005t0002 a0001c0009t0002 a0001c0004t0030 a0001c0005t0002 a0001c0009t0002	a0001c0004t0030g0063 a0001c0005t0002g0067 a0001c0009t0002g0089 a0001c0004t0030g0063 a0001c0005t0002g0067 a0001c0009t0002g0089	3	92	0.0326	17	c.270 others(36): Show c.270+35621_270+35637dupAAAAAAAAAAAAAAAAA	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27307123	A A	AGGTTTAT others(10): Show AGGTTTATATATGTTTAT	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0002 a0001c0004t0002	a0001c0004t0002g0061 a0001c0004t0002g0061	1	92	0.0109	17	c.271 others(36): Show c.271-19686_271-19685insGGTTTATATATGTTTAT	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	3/9			chr15	TogoVar
GABRG3_chr15_26966181_27546984	27348155	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01496.hp1 HG01884.hp2 others(7): Show HG01099.hp1 HG01496.hp1 HG01884.hp2 HG02258.hp1 HG02572.hp2 HG03195.hp2 HG03209.hp1 HG06807.hp2 NA18522.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0013 a0001c0016	a0001c0001t0001 a0001c0001t0021 a0001c0002t0035 others(6): Show a0001c0001t0001 a0001c0001t0021 a0001c0002t0035 a0001c0003t0022 a0001c0004t0005 a0001c0005t0002 a0001c0006t0003 a0001c0013t0023 a0001c0016t0001	a0001c0001t0001g0073 a0001c0001t0021g0072 a0001c0002t0035g0019 others(7): Show a0001c0001t0001g0073 a0001c0001t0021g0072 a0001c0002t0035g0019 a0001c0003t0022g0058 a0001c0004t0005g0050 a0001c0005t0002g0055 a0001c0006t0003g0008 a0001c0006t0003g0069 a0001c0013t0023g0006 a0001c0016t0001g0074	10	92	0.1087	17	c.574 others(36): Show c.574+19270_574+19271insAAAAAAAAAAAAAAAAA	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27518195	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0010 a0001c0004t0010	a0001c0004t0010g0075 a0001c0004t0010g0075	1	92	0.0109	17	c.713 others(34): Show c.713-1772_713-1756dupAAAAAAAAAAAAAAAAA	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	6/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRR1_chr6_89172504_89222358	89196875	G G	GAAAGAAA others(10): Show GAAAGAAAGAAAGAAAGA	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG02523.hp2 NA18966.hp1 others(1): Show HG00621.hp1 HG02523.hp2 NA18966.hp1 NA19068.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0003 a0001c0001t0002g0009 a0001c0001t0002g0019 others(1): Show a0001c0001t0002g0003 a0001c0001t0002g0009 a0001c0001t0002g0019 a0001c0001t0002g0022	4	25	0.1600	17	c.572 others(34): Show c.572+1144_572+1145insTCTTTCTTTCTTTCTTT	GABRR1	ENSG00000146276.13	transcript	ENST00000454853.7	protein_coding	5/9			chr6	TogoVar
GAD2_chr10_26211774_26309558	26218551	T T	TCTCCACA others(10): Show TCTCCACACACACACACA	intron_variant intron_variant	MODIFIER	HG02523.hp1 HG02523.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0225 a0001c0001t0003g0225	1	294	0.0034	17	c.287 others(32): Show c.287-491_287-490insTCCACACACACACACAC	GAD2	ENSG00000136750.13	transcript	ENST00000376261.8	protein_coding	3/15		INFO_REALIGN_3_PRIME	chr10	TogoVar
GADL1_chr3_30721197_30899661	30805734	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02717.hp2 NA18984.hp1 NA18986.hp1 others(1): Show HG02717.hp2 NA18984.hp1 NA18986.hp1 NA19084.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0001 a0001c0001t0003 a0001c0001t0005	a0001c0001t0001g0082 a0001c0001t0003g0019 a0001c0001t0003g0070 others(1): Show a0001c0001t0001g0082 a0001c0001t0003g0019 a0001c0001t0003g0070 a0001c0001t0005g0222	4	282	0.0142	17	c.105 others(36): Show c.1051-4663_1051-4647dupAAAAAAAAAAAAAAAAA	GADL1	ENSG00000144644.15	transcript	ENST00000282538.10	protein_coding	11/14			chr3	TogoVar
GADL1_chr3_30721197_30899661	30839514	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01109.hp1 HG01243.hp2 others(8): Show HG00639.hp2 HG01109.hp1 HG01243.hp2 HG02630.hp2 HG02818.hp2 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03486.hp1 HG06807.hp2 NA20300.hp2	a0001 a0011 a0001 a0011	a0001c0001 a0001c0010 a0011c0013 a0001c0001 a0001c0010 a0011c0013	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(6): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0024 a0001c0001t0032 a0001c0001t0038 a0001c0010t0011 a0011c0013t0014	a0001c0001t0001g0104 a0001c0001t0004g0106 a0001c0001t0004g0110 others(8): Show a0001c0001t0001g0104 a0001c0001t0004g0106 a0001c0001t0004g0110 a0001c0001t0004g0113 a0001c0001t0005g0116 a0001c0001t0007g0225 a0001c0001t0024g0206 a0001c0001t0032g0109 a0001c0001t0038g0112 a0001c0010t0011g0105 a0011c0013t0014g0013	11	282	0.0390	17	c.787 others(32): Show c.787-402_787-401insTTTTTTTTTTTTTTTTT	GADL1	ENSG00000144644.15	transcript	ENST00000282538.10	protein_coding	8/14			chr3	TogoVar
GAK_chr4_844277_937316	902596	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG02572.hp2 HG01358.hp2 HG02572.hp2	a0001 a0003 a0001 a0003	a0001c0002 a0003c0006 a0001c0002 a0003c0006	a0001c0002t0003 a0003c0006t0001 a0001c0002t0003 a0003c0006t0001	a0001c0002t0003g0259 a0003c0006t0001g0162 a0001c0002t0003g0259 a0003c0006t0001g0162	2	390	0.0051	17	c.525 others(34): Show c.525+2024_525+2040dupTTTTTTTTTTTTTTTTT	GAK	ENSG00000178950.18	transcript	ENST00000314167.9	protein_coding	5/27			chr4	TogoVar
GAL3ST1_chr22_30549635_30579665	30574607	G G	GCCGCGCC others(10): Show GCCGCGCCGCGCCCGCTC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02523.hp1 HG02523.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0008 a0002c0002t0008	a0002c0002t0008g0316 a0002c0002t0008g0316	1	452	0.0022	17	c.-27 others(26): Show c.-278_-262dupGAGCGGGCGCGGCGCGG	GAL3ST1	ENSG00000128242.13	transcript	ENST00000406361.6	protein_coding	1/4	17216		chr22	TogoVar
GAL3ST4_chr7_100154244_100173617	100172465	A A	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02738.hp2 HG03654.hp1 homoSapiens_chm13v2.hp1 HG02738.hp2 HG03654.hp1 homoSapiens_chm13v2.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0011 a0002c0002t0001g0033 a0002c0002t0001g0011 a0002c0002t0001g0033	3	402	0.0075	17	c.-41 others(28): Show c.-4109_-4108insAAAAAAAAAAAAAAAAA	GAL3ST4	ENSG00000197093.11	transcript	ENST00000360039.9	protein_coding		3849		chr7	TogoVar
GALK2_chr15_49165247_49336882	49228687	A A	ATATATAT others(10): Show ATATATATATACATATAT	intron_variant intron_variant	MODIFIER	NA18951.hp2 NA18951.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0067 a0001c0001t0007g0067	1	348	0.0029	17	c.267 others(34): Show c.267-7163_267-7162insATATATATACATATATT	GALK2	ENSG00000156958.15	transcript	ENST00000560031.6	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GALM_chr2_38661114_38739765	38703092	A A	ATATATAT others(10): Show ATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00735.hp2 NA19090.hp1 HG00735.hp2 NA19090.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0114 a0002c0002t0001g0278 a0001c0001t0001g0114 a0002c0002t0001g0278	2	328	0.0061	17	c.634 others(36): Show c.634+13199_634+13200insATATATATATATATATT	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALM_chr2_38661114_38739765	38703092	A A	ATATATAT others(10): Show ATATATATATATATATTT	intron_variant intron_variant	MODIFIER	NA18747.hp1 NA18747.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0106 a0001c0001t0001g0106	1	328	0.0031	17	c.634 others(36): Show c.634+13199_634+13200insATATATATATATATTTT	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALM_chr2_38661114_38739765	38703092	A A	ATATATAT others(10): Show ATATATATATATATTTTT	intron_variant intron_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0291 a0002c0002t0001g0291	1	328	0.0031	17	c.634 others(36): Show c.634+13199_634+13200insATATATATATATTTTTT	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALM_chr2_38661114_38739765	38703093	T T	TATATATA others(10): Show TATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18961.hp1 NA20905.hp1 NA18961.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0069 a0001c0001t0001g0005 a0001c0001t0001g0069	2	328	0.0061	17	c.634 others(36): Show c.634+13199_634+13200insATATATATATATATATA	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	4/6			chr2	TogoVar
GALNT10_chr5_154185733_154425984	154378315	T T	TTATCATC others(10): Show TTATCATCATCATCATCA	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0119 a0001c0001t0008g0119	1	236	0.0042	17	c.754 others(34): Show c.754+1854_754+1855insATCATCATCATCATCAT	GALNT10	ENSG00000164574.16	transcript	ENST00000297107.11	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr5	TogoVar
GALNT10_chr5_154185733_154425984	154396332	G G	GCATCCAC others(10): Show GCATCCACATAGGGAGTC	intron_variant intron_variant	MODIFIER	NA19083.hp2 NA19083.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0010 a0001c0003t0010	a0001c0003t0010g0070 a0001c0003t0010g0070	1	236	0.0042	17	c.105 others(36): Show c.1057-7769_1057-7753dupTCCACATAGGGAGTCCA	GALNT10	ENSG00000164574.16	transcript	ENST00000297107.11	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr5	TogoVar
GALNT10_chr5_154185733_154425984	154410955	T T	TGAACTGC others(10): Show TGAACTGCGCATGGTGCG	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0009 a0001c0005t0009	a0001c0005t0009g0026 a0001c0005t0009g0026	1	236	0.0042	17	c.138 others(36): Show c.1386+1208_1386+1209insCGGAACTGCGCATGGTG	GALNT10	ENSG00000164574.16	transcript	ENST00000297107.11	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr5	TogoVar
GALNT11_chr7_152020674_152127340	152113712	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0177 a0001c0001t0001g0177	1	284	0.0035	17	c.123 others(34): Show c.1233+340_1233+356dupTTTTTTTTTTTTTTTTT	GALNT11	ENSG00000178234.13	transcript	ENST00000430044.7	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT12_chr9_98802670_98855081	98821624	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00423.hp2 HG00438.hp1 others(72): Show HG00280.hp1 HG00423.hp2 HG00438.hp1 HG00621.hp2 HG00735.hp1 HG00735.hp2 HG00741.hp2 HG01069.hp2 HG01071.hp2 HG01074.hp1 HG01109.hp2 HG01168.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp2 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01981.hp2 HG02027.hp2 HG02055.hp2 HG02132.hp1 HG02135.hp2 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02293.hp1 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG02698.hp2 HG02735.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp1 HG03209.hp1 HG03209.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03540.hp2 HG03654.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04199.hp1 HG04199.hp2 HG04228.hp1 NA18942.hp1 NA18944.hp1 NA18945.hp1 NA18950.hp2 NA18952.hp2 NA18963.hp1 NA18966.hp1 NA18966.hp2 NA18969.hp2 NA18970.hp1 NA18971.hp2 NA18975.hp1 NA18979.hp1 NA18982.hp2 NA19003.hp1 NA19004.hp2 NA19059.hp1 NA19074.hp2 NA19080.hp2 NA19084.hp1 NA19090.hp2 NA20805.hp1 NA20905.hp1	a0001 a0002 a0008 a0001 a0002 a0008	a0001c0001 a0001c0002 a0002c0003 others(3): Show a0001c0001 a0001c0002 a0002c0003 a0002c0005 a0002c0010 a0008c0012	a0001c0001t0001 a0001c0001t0003 a0001c0001t0011 others(8): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0011 a0001c0002t0002 a0002c0003t0001 a0002c0003t0003 a0002c0003t0004 a0002c0003t0005 a0002c0005t0002 a0002c0010t0002 a0008c0012t0001	a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 others(68): Show a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0179 a0001c0001t0001g0186 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0239 a0001c0001t0001g0245 a0001c0001t0001g0247 a0001c0001t0001g0264 a0001c0001t0001g0266 a0001c0001t0001g0275 a0001c0001t0001g0276 a0001c0001t0001g0288 a0001c0001t0001g0314 a0001c0001t0001g0315 a0001c0001t0001g0319 a0001c0001t0001g0333 a0001c0001t0003g0152 a0001c0001t0003g0171 a0001c0001t0003g0172 a0001c0001t0003g0173 a0001c0001t0003g0174 a0001c0001t0011g0278 a0001c0002t0002g0163 a0001c0002t0002g0170 a0001c0002t0002g0242 a0001c0002t0002g0263 a0002c0003t0001g0249 a0002c0003t0001g0267 a0002c0003t0001g0269 a0002c0003t0001g0271 a0002c0003t0001g0272 a0002c0003t0001g0274 a0002c0003t0001g0277 a0002c0003t0001g0279 a0002c0003t0001g0281 a0002c0003t0001g0282 a0002c0003t0001g0283 a0002c0003t0001g0284 a0002c0003t0001g0287 a0002c0003t0001g0316 a0002c0003t0001g0317 a0002c0003t0001g0318 a0002c0003t0001g0322 a0002c0003t0001g0323 a0002c0003t0001g0324 a0002c0003t0003g0268 a0002c0003t0003g0273 a0002c0003t0003g0327 a0002c0003t0004g0022 a0002c0003t0005g0237 a0002c0005t0002g0265 a0002c0005t0002g0270 a0002c0005t0002g0280 a0002c0005t0002g0286 a0002c0005t0002g0328 a0002c0010t0002g0325 a0008c0012t0001g0285	75	376	0.1995	17	c.372 others(34): Show c.372-1619_372-1618insAAAAAAAAAAAAAAAAA	GALNT12	ENSG00000119514.7	transcript	ENST00000375011.4	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr9	TogoVar
GALNT14_chr2_30905467_31143440	31038085	T T	TATATATA others(10): Show TATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG02004.hp2 HG02615.hp1 others(6): Show HG01496.hp1 HG02004.hp2 HG02615.hp1 HG02647.hp2 HG02698.hp1 HG02897.hp1 HG03471.hp2 NA18991.hp2 NA19000.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0001 a0001c0002t0002 a0002c0003t0001 others(1): Show a0001c0001t0001 a0001c0002t0002 a0002c0003t0001 a0002c0003t0004	a0001c0001t0001g0077 a0001c0001t0001g0091 a0001c0001t0001g0093 others(6): Show a0001c0001t0001g0077 a0001c0001t0001g0091 a0001c0001t0001g0093 a0001c0001t0001g0098 a0001c0001t0001g0148 a0001c0002t0002g0193 a0002c0003t0001g0043 a0002c0003t0001g0099 a0002c0003t0004g0004	9	226	0.0398	17	c.130 others(36): Show c.130-45079_130-45078insTATATATATATATATAT	GALNT14	ENSG00000158089.15	transcript	ENST00000349752.10	protein_coding	1/14			chr2	TogoVar
GALNT15_chr3_16169680_16235165	16232518	A A	ATATATAT others(10): Show ATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18952.hp2 NA18952.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0164 a0001c0001t0002g0164	1	388	0.0026	17	c.50 others(28): Show c.5018_*5019insTATATATATATATATAT	GALNT15	ENSG00000131386.20	transcript	ENST00000339732.10	protein_coding		2354		chr3	TogoVar
GALNT15_chr3_16169680_16235165	16233094	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0244 a0001c0001t0001g0244	1	388	0.0026	17	c.55 others(28): Show c.5594_*5595insTTTTTTTTTTTTTTTTT	GALNT15	ENSG00000131386.20	transcript	ENST00000339732.10	protein_coding		2930		chr3	TogoVar
GALNT16_chr14_69255158_69359466	69264819	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01496.hp1 HG01934.hp2 others(14): Show HG01081.hp2 HG01496.hp1 HG01934.hp2 HG02165.hp1 HG02280.hp1 HG02717.hp2 HG02895.hp2 HG02896.hp1 HG02922.hp2 HG02970.hp2 HG03041.hp2 HG03139.hp2 HG03239.hp1 HG03486.hp1 HG04228.hp2 NA18973.hp2 NA19240.hp2	a0001 a0003 a0007 a0001 a0003 a0007	a0001c0001 a0001c0003 a0001c0016 others(2): Show a0001c0001 a0001c0003 a0001c0016 a0003c0004 a0007c0019	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0003t0001 a0001c0003t0023 a0001c0016t0006 a0003c0004t0001 a0003c0004t0009 a0007c0019t0008	a0001c0001t0001g0009 a0001c0001t0001g0152 a0001c0001t0001g0155 others(14): Show a0001c0001t0001g0009 a0001c0001t0001g0152 a0001c0001t0001g0155 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0002g0095 a0001c0001t0002g0096 a0001c0001t0002g0275 a0001c0001t0002g0277 a0001c0001t0004g0274 a0001c0003t0001g0154 a0001c0003t0023g0021 a0001c0016t0006g0156 a0003c0004t0001g0010 a0003c0004t0009g0150 a0003c0004t0009g0151 a0007c0019t0008g0153	17	306	0.0556	17	c.177 others(34): Show c.177+4363_177+4364insTTTTTTTTTTTTTTTTT	GALNT16	ENSG00000100626.17	transcript	ENST00000448469.8	protein_coding	1/14		INFO_REALIGN_3_PRIME	chr14	TogoVar
GALNT17_chr7_71127144_71718599	71131833	G G	GCGCGCGT others(10): Show GCGCGCGTACCTCCCCGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0027 a0001c0001t0002g0027	1	76	0.0132	17	c.-97 others(26): Show c.-970_-969insCGCGCGTACCTCCCCGC	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding		310		chr7	TogoVar
GALNT17_chr7_71127144_71718599	71297526	G G	GGCTGAAG others(10): Show GGCTGAAGGTGGAGGATT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00642.hp1 HG00735.hp1 others(18): Show HG00438.hp2 HG00642.hp1 HG00735.hp1 HG00738.hp1 HG00741.hp1 HG01261.hp2 HG01346.hp1 HG01433.hp1 HG02040.hp1 HG02129.hp1 HG02615.hp2 HG02896.hp1 HG02976.hp1 HG03492.hp2 HG03579.hp2 HG03704.hp2 HG03710.hp2 HG04228.hp1 NA18983.hp1 NA19000.hp1 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(12): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0001t0015 a0001c0001t0016 a0001c0001t0021 a0001c0002t0002 a0001c0002t0003 a0001c0002t0008 a0001c0003t0002	a0001c0001t0001g0041 a0001c0001t0003g0001 a0001c0001t0005g0051 others(18): Show a0001c0001t0001g0041 a0001c0001t0003g0001 a0001c0001t0005g0051 a0001c0001t0005g0054 a0001c0001t0006g0064 a0001c0001t0007g0055 a0001c0001t0007g0062 a0001c0001t0009g0061 a0001c0001t0009g0065 a0001c0001t0011g0036 a0001c0001t0011g0049 a0001c0001t0013g0073 a0001c0001t0013g0075 a0001c0001t0015g0076 a0001c0001t0016g0043 a0001c0001t0021g0010 a0001c0002t0002g0020 a0001c0002t0003g0006 a0001c0002t0008g0025 a0001c0003t0002g0067 a0001c0003t0002g0069	21	76	0.2763	17	c.239 others(36): Show c.239-38020_239-38004dupGAAGGTGGAGGATTGCT	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT18_chr11_11265877_11627005	11269280	T T	TTTTTTTT others(10): Show TTTTTTTTTTTTTTTTTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0012 a0001c0002t0012	a0001c0002t0012g0006 a0001c0002t0012g0006	1	260	0.0039	17	c.18 others(28): Show c.1863_*1864insGAAAAAAAAAAAAAAAA	GALNT18	ENSG00000110328.6	transcript	ENST00000227756.5	protein_coding		1596		chr11	TogoVar
GALNT18_chr11_11265877_11627005	11620336	T T	TGTGTGTG others(10): Show TGTGTGTGTGCACACCCG	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0043 a0001c0001t0002g0043	1	260	0.0039	17	c.235 others(34): Show c.235+1022_235+1023insCGGGTGTGCACACACAC	GALNT18	ENSG00000110328.6	transcript	ENST00000227756.5	protein_coding	1/10			chr11	TogoVar
GALNT2_chr1_230062238_230287122	230092185	T T	TGTTTTTT others(10): Show TGTTTTTTTTTTTTTTTG	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0023	a0001c0001t0023g0276 a0001c0001t0023g0276	1	324	0.0031	17	c.126 others(36): Show c.126+24779_126+24780insGTTTTTTTTTTTTTTTG	GALNT2	ENSG00000143641.10	transcript	ENST00000366672.5	protein_coding	1/15			chr1	TogoVar
GALNT2_chr1_230062238_230287122	230222031	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00609.hp2 HG00621.hp1 others(98): Show HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00639.hp1 HG00642.hp2 HG00673.hp1 HG01074.hp2 HG01175.hp1 HG01243.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01928.hp1 HG01981.hp1 HG01993.hp1 HG02040.hp1 HG02080.hp1 HG02080.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02155.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02280.hp1 HG02572.hp1 HG02572.hp2 HG02647.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp1 HG02897.hp1 HG02922.hp2 HG02965.hp2 HG02976.hp1 HG03041.hp2 HG03130.hp1 HG03139.hp2 HG03209.hp1 HG03471.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03669.hp2 HG03834.hp2 HG03942.hp1 HG04184.hp1 HG04204.hp2 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp2 NA18939.hp1 NA18941.hp2 NA18946.hp2 NA18948.hp2 NA18950.hp2 NA18952.hp1 NA18959.hp1 NA18960.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp2 NA18982.hp2 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18993.hp1 NA18998.hp2 NA19003.hp1 NA19005.hp1 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp1 NA19043.hp1 NA19065.hp2 NA19066.hp2 NA19077.hp1 NA19079.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA19091.hp1 NA19091.hp2 NA20905.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0002 a0001c0003 others(6): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006 a0001c0009 a0001c0011 a0002c0004 a0002c0005 a0005c0015	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(33): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0008 a0001c0001t0010 a0001c0001t0015 a0001c0001t0037 a0001c0001t0059 a0001c0001t0060 a0001c0001t0061 a0001c0001t0063 a0001c0001t0064 a0001c0002t0001 a0001c0002t0004 a0001c0002t0005 a0001c0002t0009 a0001c0002t0018 a0001c0002t0019 a0001c0002t0026 a0001c0002t0030 a0001c0002t0031 a0001c0002t0032 a0001c0002t0033 a0001c0002t0039 a0001c0002t0051 a0001c0002t0067 a0001c0003t0003 a0001c0006t0038 a0001c0009t0029 a0001c0009t0052 a0001c0011t0062 a0002c0004t0002 a0002c0004t0035 a0002c0004t0041 a0002c0005t0002 a0005c0015t0027	a0001c0001t0001g0134 a0001c0001t0001g0149 a0001c0001t0001g0153 others(98): Show a0001c0001t0001g0134 a0001c0001t0001g0149 a0001c0001t0001g0153 a0001c0001t0001g0214 a0001c0001t0001g0229 a0001c0001t0003g0024 a0001c0001t0003g0027 a0001c0001t0003g0029 a0001c0001t0003g0141 a0001c0001t0003g0169 a0001c0001t0003g0175 a0001c0001t0003g0178 a0001c0001t0003g0203 a0001c0001t0003g0244 a0001c0001t0003g0261 a0001c0001t0003g0262 a0001c0001t0003g0283 a0001c0001t0003g0294 a0001c0001t0003g0295 a0001c0001t0003g0300 a0001c0001t0003g0302 a0001c0001t0005g0099 a0001c0001t0008g0005 a0001c0001t0008g0252 a0001c0001t0008g0270 a0001c0001t0008g0312 a0001c0001t0010g0147 a0001c0001t0015g0296 a0001c0001t0037g0194 a0001c0001t0059g0319 a0001c0001t0060g0202 a0001c0001t0061g0104 a0001c0001t0063g0108 a0001c0001t0064g0087 a0001c0002t0001g0010 a0001c0002t0001g0031 a0001c0002t0001g0055 a0001c0002t0001g0058 a0001c0002t0001g0060 a0001c0002t0001g0067 a0001c0002t0001g0074 a0001c0002t0001g0113 a0001c0002t0001g0155 a0001c0002t0001g0156 a0001c0002t0001g0167 a0001c0002t0001g0176 a0001c0002t0001g0180 a0001c0002t0001g0191 a0001c0002t0001g0192 a0001c0002t0001g0193 a0001c0002t0001g0210 a0001c0002t0001g0228 a0001c0002t0001g0230 a0001c0002t0001g0237 a0001c0002t0001g0322 a0001c0002t0004g0070 a0001c0002t0005g0109 a0001c0002t0005g0136 a0001c0002t0009g0023 a0001c0002t0018g0287 a0001c0002t0019g0190 a0001c0002t0026g0195 a0001c0002t0030g0088 a0001c0002t0031g0222 a0001c0002t0032g0220 a0001c0002t0033g0110 a0001c0002t0039g0323 a0001c0002t0051g0280 a0001c0002t0067g0258 a0001c0003t0003g0304 a0001c0006t0038g0277 a0001c0009t0029g0273 a0001c0009t0052g0254 a0001c0011t0062g0320 a0002c0004t0002g0001 a0002c0004t0002g0046 a0002c0004t0002g0076 a0002c0004t0002g0080 a0002c0004t0002g0081 a0002c0004t0002g0084 a0002c0004t0002g0085 a0002c0004t0002g0091 a0002c0004t0002g0131 a0002c0004t0002g0133 a0002c0004t0002g0135 a0002c0004t0002g0154 a0002c0004t0002g0159 a0002c0004t0002g0204 a0002c0004t0002g0221 a0002c0004t0002g0227 a0002c0004t0002g0231 a0002c0004t0002g0235 a0002c0004t0002g0236 a0002c0004t0002g0240 a0002c0004t0002g0245 a0002c0004t0002g0246 a0002c0004t0002g0249 a0002c0004t0035g0250 a0002c0004t0041g0165 a0002c0005t0002g0021 a0005c0015t0027g0310	101	324	0.3117	17	c.375 others(36): Show c.375-13970_375-13969insTTTTTTTTTTTTTTTTT	GALNT2	ENSG00000143641.10	transcript	ENST00000366672.5	protein_coding	3/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
GALNT5_chr2_157252705_157323491	157256569	A A	AAAAAAAA others(10): Show AAAAAAAAAAAAAAATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00597.hp2 HG00597.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0231 a0003c0004t0001g0231	1	282	0.0036	17	c.-15 others(28): Show c.-1514_-1513insAAAAAAAAAAAAAATAT	GALNT5	ENSG00000136542.9	transcript	ENST00000259056.5	protein_coding		1135		chr2	TogoVar
GALNT5_chr2_157252705_157323491	157256569	A A	AAAAAAAA others(10): Show AAAAAAAAAAATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0044 a0002c0005t0044	a0002c0005t0044g0169 a0002c0005t0044g0169	1	282	0.0036	17	c.-15 others(28): Show c.-1514_-1513insAAAAAAAAAATATATAT	GALNT5	ENSG00000136542.9	transcript	ENST00000259056.5	protein_coding		1135		chr2	TogoVar
GALNT5_chr2_157252705_157323491	157256569	A A	AAAAAAAA others(10): Show AAAAAAAAATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0019 a0002c0005t0019	a0002c0005t0019g0200 a0002c0005t0019g0200	1	282	0.0036	17	c.-15 others(28): Show c.-1514_-1513insAAAAAAAATATATATAT	GALNT5	ENSG00000136542.9	transcript	ENST00000259056.5	protein_coding		1135		chr2	TogoVar
GALNT9_chr12_132191372_132334589	132295810	G G	GGAACAGG others(10): Show GGAACAGGGAGAGCCTCC	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00408.hp2 others(64): Show HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00733.hp2 HG01106.hp1 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02132.hp1 HG02148.hp1 HG02148.hp2 HG02280.hp1 HG02280.hp2 HG02615.hp2 HG02683.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02965.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG03209.hp1 HG03225.hp2 HG03453.hp1 HG03486.hp1 HG03492.hp2 HG03579.hp1 HG03579.hp2 HG03688.hp1 HG03942.hp1 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18945.hp1 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18966.hp2 NA18980.hp1 NA18999.hp1 NA19002.hp1 NA19007.hp2 NA19009.hp2 NA19056.hp1 NA19063.hp1 NA19067.hp1 NA19067.hp2 NA19070.hp2 NA19085.hp1 NA19085.hp2 NA19091.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0004 others(15): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0008 a0001c0009 a0001c0010 a0001c0011 a0001c0018 a0001c0019 a0001c0026 a0001c0029 a0001c0034 a0001c0036 a0001c0038 a0002c0032	a0001c0001t0001 a0001c0002t0001 a0001c0002t0005 others(18): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0005 a0001c0002t0013 a0001c0004t0001 a0001c0005t0001 a0001c0006t0001 a0001c0007t0001 a0001c0007t0010 a0001c0008t0002 a0001c0009t0002 a0001c0010t0001 a0001c0011t0001 a0001c0018t0001 a0001c0019t0003 a0001c0026t0014 a0001c0029t0003 a0001c0034t0004 a0001c0036t0003 a0001c0038t0001 a0002c0032t0002	a0001c0001t0001g0011 a0001c0001t0001g0017 a0001c0001t0001g0019 others(64): Show a0001c0001t0001g0011 a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0033 a0001c0001t0001g0150 a0001c0002t0001g0034 a0001c0002t0001g0053 a0001c0002t0001g0058 a0001c0002t0001g0063 a0001c0002t0001g0068 a0001c0002t0001g0069 a0001c0002t0001g0070 a0001c0002t0001g0071 a0001c0002t0001g0079 a0001c0002t0001g0080 a0001c0002t0001g0081 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0134 a0001c0002t0001g0141 a0001c0002t0001g0151 a0001c0002t0001g0152 a0001c0002t0005g0066 a0001c0002t0013g0021 a0001c0004t0001g0016 a0001c0004t0001g0020 a0001c0004t0001g0056 a0001c0004t0001g0109 a0001c0004t0001g0112 a0001c0004t0001g0154 a0001c0004t0001g0157 a0001c0005t0001g0008 a0001c0005t0001g0088 a0001c0006t0001g0013 a0001c0006t0001g0073 a0001c0006t0001g0097 a0001c0006t0001g0142 a0001c0007t0001g0061 a0001c0007t0001g0104 a0001c0007t0001g0138 a0001c0007t0001g0159 a0001c0007t0010g0108 a0001c0008t0002g0170 a0001c0008t0002g0171 a0001c0008t0002g0172 a0001c0008t0002g0173 a0001c0008t0002g0182 a0001c0009t0002g0168 a0001c0009t0002g0169 a0001c0009t0002g0174 a0001c0009t0002g0175 a0001c0009t0002g0177 a0001c0010t0001g0085 a0001c0010t0001g0086 a0001c0010t0001g0087 a0001c0010t0001g0089 a0001c0011t0001g0057 a0001c0011t0001g0065 a0001c0018t0001g0047 a0001c0019t0003g0077 a0001c0019t0003g0145 a0001c0026t0014g0052 a0001c0029t0003g0107 a0001c0034t0004g0158 a0001c0036t0003g0055 a0001c0038t0001g0046 a0002c0032t0002g0167	67	183	0.3661	17	c.239 others(34): Show c.239-9397_239-9381dupGGAGGCTCTCCCTGTTC	GALNT9	ENSG00000182870.13	transcript	ENST00000328957.13	protein_coding	1/10			chr12	TogoVar
GALNT9_chr12_132191372_132334589	132296036	A A	AAACAGGG others(10): Show AAACAGGGACGGCCTCCG	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01167.hp1 HG02976.hp1 others(1): Show HG01109.hp1 HG01167.hp1 HG02976.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0014 a0001c0025 a0001c0001 a0001c0014 a0001c0025	a0001c0001t0001 a0001c0014t0003 a0001c0025t0012 a0001c0001t0001 a0001c0014t0003 a0001c0025t0012	a0001c0001t0001g0094 a0001c0014t0003g0074 a0001c0014t0003g0153 others(1): Show a0001c0001t0001g0094 a0001c0014t0003g0074 a0001c0014t0003g0153 a0001c0025t0012g0048	4	183	0.0219	17	c.239 others(34): Show c.239-9607_239-9606insCGGAGGCCGTCCCTGTT	GALNT9	ENSG00000182870.13	transcript	ENST00000328957.13	protein_coding	1/10			chr12	TogoVar
GALNTL5_chr7_151951446_152024929	151990580	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00423.hp2 HG00438.hp1 others(113): Show HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00621.hp1 HG00642.hp1 HG00642.hp2 HG00738.hp1 HG00738.hp2 HG01070.hp1 HG01071.hp2 HG01109.hp1 HG01123.hp1 HG01169.hp1 HG01175.hp1 HG01192.hp1 HG01243.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp2 HG01515.hp1 HG01952.hp2 HG01975.hp1 HG01978.hp1 HG01981.hp2 HG02004.hp2 HG02027.hp2 HG02040.hp1 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02071.hp2 HG02148.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp2 HG02273.hp2 HG02280.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02559.hp1 HG02602.hp1 HG02602.hp2 HG02630.hp2 HG02683.hp2 HG02717.hp1 HG02735.hp2 HG02818.hp1 HG02896.hp1 HG02922.hp2 HG02965.hp1 HG03098.hp1 HG03195.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp2 HG03654.hp1 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp2 HG04204.hp1 HG04228.hp1 HG06807.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp2 NA18946.hp1 NA18949.hp1 NA18950.hp1 NA18951.hp1 NA18953.hp1 NA18954.hp1 NA18957.hp1 NA18965.hp1 NA18973.hp1 NA18975.hp1 NA18977.hp1 NA18979.hp1 NA18980.hp2 NA18989.hp1 NA18990.hp2 NA18991.hp2 NA19000.hp2 NA19005.hp2 NA19007.hp2 NA19011.hp2 NA19030.hp1 NA19043.hp1 NA19056.hp1 NA19060.hp2 NA19064.hp1 NA19065.hp1 NA19066.hp1 NA19074.hp2 NA19081.hp2 NA20129.hp1 NA20805.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0005 a0008 a0010 a0014	a0001c0001 a0002c0002 a0002c0019 others(5): Show a0001c0001 a0002c0002 a0002c0019 a0003c0003 a0005c0005 a0008c0009 a0010c0010 a0014c0011	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0002c0002t0001 a0002c0002t0002 a0002c0019t0001 a0003c0003t0001 a0003c0003t0002 a0005c0005t0001 a0008c0009t0001 a0010c0010t0001 a0014c0011t0001	a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0012 others(112): Show a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0022 a0001c0001t0001g0053 a0001c0001t0001g0056 a0001c0001t0001g0089 a0001c0001t0001g0103 a0001c0001t0001g0120 a0001c0001t0001g0181 a0001c0001t0001g0188 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0209 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0225 a0001c0001t0001g0262 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0274 a0001c0001t0001g0275 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0280 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0285 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0298 a0001c0001t0001g0302 a0001c0001t0001g0323 a0001c0001t0001g0324 a0001c0001t0001g0367 a0001c0001t0002g0150 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0311 a0001c0001t0002g0314 a0001c0001t0002g0318 a0001c0001t0002g0329 a0001c0001t0002g0368 a0001c0001t0002g0371 a0001c0001t0002g0373 a0001c0001t0002g0376 a0001c0001t0002g0377 a0001c0001t0002g0379 a0001c0001t0002g0380 a0001c0001t0004g0011 a0002c0002t0001g0021 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0025 a0002c0002t0001g0026 a0002c0002t0001g0029 a0002c0002t0001g0033 a0002c0002t0001g0034 a0002c0002t0001g0039 a0002c0002t0001g0043 a0002c0002t0001g0050 a0002c0002t0001g0052 a0002c0002t0001g0054 a0002c0002t0001g0070 a0002c0002t0001g0077 a0002c0002t0001g0078 a0002c0002t0001g0085 a0002c0002t0001g0087 a0002c0002t0001g0088 a0002c0002t0001g0105 a0002c0002t0001g0108 a0002c0002t0001g0189 a0002c0002t0001g0190 a0002c0002t0001g0200 a0002c0002t0001g0264 a0002c0002t0001g0265 a0002c0002t0001g0297 a0002c0002t0002g0176 a0002c0002t0002g0307 a0002c0002t0002g0317 a0002c0002t0002g0327 a0002c0019t0001g0035 a0003c0003t0001g0060 a0003c0003t0001g0062 a0003c0003t0001g0194 a0003c0003t0001g0213 a0003c0003t0001g0217 a0003c0003t0001g0236 a0003c0003t0001g0238 a0003c0003t0001g0239 a0003c0003t0001g0242 a0003c0003t0001g0245 a0003c0003t0001g0249 a0003c0003t0001g0296 a0003c0003t0001g0332 a0003c0003t0002g0309 a0005c0005t0001g0010 a0005c0005t0001g0299 a0005c0005t0001g0345 a0008c0009t0001g0347 a0010c0010t0001g0253 a0010c0010t0001g0254 a0014c0011t0001g0361	116	384	0.3021	17	c.658 others(34): Show c.658+3311_658+3312insAAAAAAAAAAAAAAAAA	GALNTL5	ENSG00000106648.15	transcript	ENST00000392800.7	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNTL6_chr4_171808404_173046559	172504159	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0031 a0001c0001t0011g0031	1	40	0.0250	17	c.553 others(38): Show c.553+155474_553+155490dupAAAAAAAAAAAAAAAAA	GALNTL6	ENSG00000174473.17	transcript	ENST00000506823.6	protein_coding	5/12		INFO_REALIGN_3_PRIME	chr4	TogoVar
GALNTL6_chr4_171808404_173046559	172552837	T T	TAAAAAAA others(10): Show TAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0020 a0001c0001t0006g0020	1	40	0.0250	17	c.553 others(38): Show c.553+204152_553+204168dupAAAAAAAAAAAAAAAAA	GALNTL6	ENSG00000174473.17	transcript	ENST00000506823.6	protein_coding	5/12		INFO_REALIGN_3_PRIME	chr4	TogoVar
GALT_chr9_34641675_34656035	34644352	T T	TATATATA others(10): Show TATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0002 a0001c0003t0001g0002	1	416	0.0024	17	c.-23 others(28): Show c.-2353_-2352insATATATATATATATATA	GALT	ENSG00000213930.12	transcript	ENST00000378842.8	protein_coding		2322		chr9	TogoVar
GAPVD1_chr9_125256826_125372207	125286791	A A	ATTTTCTT others(10): Show ATTTTCTTAGTTCTTTTT	intron_variant intron_variant	MODIFIER	NA18974.hp1 NA18974.hp1	a0006 a0006	a0006c0011 a0006c0011	a0006c0011t0005 a0006c0011t0005	a0006c0011t0005g0337 a0006c0011t0005g0337	1	340	0.0029	17	c.-14 others(36): Show c.-149-8666_-149-8665insTTTCTTAGTTCTTTTTT	GAPVD1	ENSG00000165219.23	transcript	ENST00000297933.11	protein_coding	2/27		INFO_REALIGN_3_PRIME	chr9	TogoVar
GAPVD1_chr9_125256826_125372207	125291709	G G	GACCCATA others(10): Show GACCCATAGTGTGAAGGA	intron_variant intron_variant	MODIFIER	NA18967.hp1 NA18967.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0229 a0001c0001t0001g0229	1	340	0.0029	17	c.-14 others(36): Show c.-149-3748_-149-3732dupACCCATAGTGTGAAGGA	GAPVD1	ENSG00000165219.23	transcript	ENST00000297933.11	protein_coding	2/27		INFO_REALIGN_3_PRIME	chr9	TogoVar
GAPVD1_chr9_125256826_125372207	125293854	A A	ATATATAT others(10): Show ATATATATAAATATATTT	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0006 a0001c0010t0006	a0001c0010t0006g0167 a0001c0010t0006g0167	1	340	0.0029	17	c.-14 others(36): Show c.-149-1596_-149-1595insAATATATTTTATATATA	GAPVD1	ENSG00000165219.23	transcript	ENST00000297933.11	protein_coding	2/27		INFO_REALIGN_3_PRIME	chr9	TogoVar
GAPVD1_chr9_125256826_125372207	125293856	A A	ATATATAT others(10): Show ATATATATAAATATATTT	intron_variant intron_variant	MODIFIER	HG00558.hp1 NA18973.hp1 HG00558.hp1 NA18973.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0184 a0001c0001t0001g0188 a0001c0001t0001g0184 a0001c0001t0001g0188	2	340	0.0059	17	c.-14 others(36): Show c.-149-1594_-149-1593insAATATATTTTATATATA	GAPVD1	ENSG00000165219.23	transcript	ENST00000297933.11	protein_coding	2/27		INFO_REALIGN_3_PRIME	chr9	TogoVar
GAPVD1_chr9_125256826_125372207	125300023	G G	GAAAAAAA others(10): Show GAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00438.hp1 NA18612.hp2 NA18961.hp2 HG00438.hp1 NA18612.hp2 NA18961.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0177 a0001c0001t0001g0274 a0001c0001t0001g0280 a0001c0001t0001g0177 a0001c0001t0001g0274 a0001c0001t0001g0280	3	340	0.0088	17	c.185 others(32): Show c.185+933_185+934insAAAAAAAAAAAAAAAAA	GAPVD1	ENSG00000165219.23	transcript	ENST00000297933.11	protein_coding	4/27		INFO_REALIGN_3_PRIME	chr9	TogoVar
GAREM1_chr18_32258522_32475882	32364027	T T	TATATATA others(10): Show TATATATATATATATATG	intron_variant intron_variant	MODIFIER	NA18973.hp2 NA18973.hp2	a0003 a0003	a0003c0016 a0003c0016	a0003c0016t0002 a0003c0016t0002	a0003c0016t0002g0153 a0003c0016t0002g0153	1	192	0.0052	17	c.262 others(36): Show c.262+28867_262+28868insCATATATATATATATAT	GAREM1	ENSG00000141441.16	transcript	ENST00000269209.7	protein_coding	2/5			chr18	TogoVar
GAREM1_chr18_32258522_32475882	32364028	G G	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG02451.hp2 HG02615.hp1 others(5): Show HG00280.hp2 HG02451.hp2 HG02615.hp1 HG02809.hp2 HG02965.hp2 HG03471.hp1 NA18959.hp2 NA19240.hp2	a0001 a0003 a0001 a0003	a0001c0003 a0001c0020 a0003c0007 a0001c0003 a0001c0020 a0003c0007	a0001c0003t0003 a0001c0003t0012 a0001c0020t0003 others(1): Show a0001c0003t0003 a0001c0003t0012 a0001c0020t0003 a0003c0007t0002	a0001c0003t0003g0114 a0001c0003t0003g0178 a0001c0003t0003g0185 others(5): Show a0001c0003t0003g0114 a0001c0003t0003g0178 a0001c0003t0003g0185 a0001c0003t0003g0189 a0001c0003t0003g0191 a0001c0003t0012g0187 a0001c0020t0003g0055 a0003c0007t0002g0069	8	192	0.0417	17	c.262 others(36): Show c.262+28850_262+28866dupAAAAAAAAAAAAAAAAA	GAREM1	ENSG00000141441.16	transcript	ENST00000269209.7	protein_coding	2/5			chr18	TogoVar
GAREM2_chr2_26168088_26194663	26178889	A A	AGGAGGCG others(10): Show AGGAGGCGGAGAGGAGGC	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0046 a0001c0001t0001g0046	1	306	0.0033	17	c.253 others(34): Show c.253+2415_253+2416insAGGAGGCGGAGGCGGAG	GAREM2	ENSG00000157833.13	transcript	ENST00000401533.7	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr2	TogoVar

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