view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GABRG2_chr5_162062773_162160526 | 162109389 | A | AATATATA others(11): Show |
intron_variant | MODIFIER | HG03195.hp2 NA18747.hp1 NA18953.hp1 others(3): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0002a0001c0001t0003a0001c0004t0005 | a0001c0001t0002g0011 a0001c0001t0002g0204 a0001c0001t0002g0220 others(2): Show |
6 | 328 | 0.0183 | 18 | c.769 others(35): Show |
GABRG2 | ENSG00000113327.17 | transcript | ENST00000639213.2 | protein_coding | 6/9 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
GABRG2_chr5_162062773_162160526 | 162109420 | A | ATATATAT others(11): Show |
intron_variant | MODIFIER | HG00140.hp1 HG02027.hp2 NA19087.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0001t0016a0001c0002t0003 | a0001c0001t0003g0108 a0001c0001t0016g0121 a0001c0002t0003g0122 |
3 | 328 | 0.0092 | 18 | c.769 others(35): Show |
GABRG2 | ENSG00000113327.17 | transcript | ENST00000639213.2 | protein_coding | 6/9 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
GABRG2_chr5_162062773_162160526 | 162109420 | A | ATATATTT others(11): Show |
intron_variant | MODIFIER | HG03225.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0211 | 1 | 328 | 0.0031 | 18 | c.769 others(35): Show |
GABRG2 | ENSG00000113327.17 | transcript | ENST00000639213.2 | protein_coding | 6/9 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
GABRG3_chr15_26966181_27546984 | 27001888 | G | GTTTTTTT others(11): Show |
intron_variant | MODIFIER | HG01071.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0091 | 1 | 92 | 0.0109 | 18 | c.202 others(37): Show |
GABRG3 | ENSG00000182256.13 | transcript | ENST00000615808.5 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GABRG3_chr15_26966181_27546984 | 27062434 | T | TAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG00323.hp1 | a0001 | a0001c0001 | a0001c0001t0025 | a0001c0001t0025g0092 | 1 | 92 | 0.0109 | 18 | c.270 others(37): Show |
GABRG3 | ENSG00000182256.13 | transcript | ENST00000615808.5 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GABRG3_chr15_26966181_27546984 | 27216743 | T | TTTATTTT others(11): Show |
intron_variant | MODIFIER | HG01884.hp1 HG02145.hp1 |
a0001 | a0001c0003a0001c0005 | a0001c0003t0019a0001c0005t0005 | a0001c0003t0019g0064 a0001c0005t0005g0045 |
2 | 92 | 0.0217 | 18 | c.271 others(39): Show |
GABRG3 | ENSG00000182256.13 | transcript | ENST00000615808.5 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GABRG3_chr15_26966181_27546984 | 27248803 | C | CACACACA others(11): Show |
intron_variant | MODIFIER | HG03710.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0090 | 1 | 92 | 0.0109 | 18 | c.271 others(37): Show |
GABRG3 | ENSG00000182256.13 | transcript | ENST00000615808.5 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GABRG3_chr15_26966181_27546984 | 27306979 | A | AAACATGT others(11): Show |
intron_variant | MODIFIER | HG03453.hp2 NA21309.hp1 |
a0001 | a0001c0001a0001c0009 | a0001c0001t0001a0001c0009t0010 | a0001c0001t0001g0071 a0001c0009t0010g0051 |
2 | 92 | 0.0217 | 18 | c.271 others(37): Show |
GABRG3 | ENSG00000182256.13 | transcript | ENST00000615808.5 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GABRG3_chr15_26966181_27546984 | 27307206 | C | CATAGGTT others(11): Show |
intron_variant | MODIFIER | HG02922.hp1 | a0001 | a0001c0002 | a0001c0002t0026 | a0001c0002t0026g0070 | 1 | 92 | 0.0109 | 18 | c.271 others(37): Show |
GABRG3 | ENSG00000182256.13 | transcript | ENST00000615808.5 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GABRG3_chr15_26966181_27546984 | 27348155 | C | CAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG03195.hp1 HG03225.hp2 |
a0001 | a0001c0002a0001c0018 | a0001c0002t0006a0001c0018t0004 | a0001c0002t0006g0062 a0001c0018t0004g0053 |
2 | 92 | 0.0217 | 18 | c.574 others(37): Show |
GABRG3 | ENSG00000182256.13 | transcript | ENST00000615808.5 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GABRG3_chr15_26966181_27546984 | 27394510 | T | TTTATATT others(11): Show |
intron_variant | MODIFIER | HG02922.hp2 NA19030.hp1 |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0004t0011 | a0001c0001t0001g0005 a0001c0004t0011g0078 |
2 | 92 | 0.0217 | 18 | c.574 others(37): Show |
GABRG3 | ENSG00000182256.13 | transcript | ENST00000615808.5 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GABRG3_chr15_26966181_27546984 | 27518195 | C | CAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG02809.hp2 HG03098.hp2 |
a0001 | a0001c0008a0001c0009 | a0001c0008t0008a0001c0009t0002 | a0001c0008t0008g0001 a0001c0009t0002g0089 |
2 | 92 | 0.0217 | 18 | c.713 others(35): Show |
GABRG3 | ENSG00000182256.13 | transcript | ENST00000615808.5 | protein_coding | 6/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GABRQ_chrX_152632895_152662542 | 152659792 | T | TATATACA others(11): Show |
downstream_gene_variant | MODIFIER | HG00673.hp1 HG02451.hp2 NA18951.hp2 others(2): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0003c0003t0001 | a0001c0001t0001g0003 a0001c0001t0001g0066 a0001c0001t0001g0094 others(2): Show |
5 | 298 | 0.0168 | 18 | c.*65 others(29): Show |
GABRQ | ENSG00000268089.3 | transcript | ENST00000598523.3 | protein_coding | 2251 | chrX | TogoVar | |||||||
GABRR2_chr6_89249464_89320299 | 89280247 | T | TATATATA others(11): Show |
intron_variant | MODIFIER | NA18985.hp1 NA18987.hp2 |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0007 | a0001c0002t0001g0342 a0001c0002t0007g0204 |
2 | 366 | 0.0055 | 18 | c.221 others(35): Show |
GABRR2 | ENSG00000111886.11 | transcript | ENST00000402938.4 | protein_coding | 2/8 | chr6 | TogoVar | |||||||
GABRR2_chr6_89249464_89320299 | 89280253 | T | TATATATA others(11): Show |
intron_variant | MODIFIER | NA20300.hp2 | a0002 | a0002c0003 | a0002c0003t0002 | a0002c0003t0002g0215 | 1 | 366 | 0.0027 | 18 | c.221 others(35): Show |
GABRR2 | ENSG00000111886.11 | transcript | ENST00000402938.4 | protein_coding | 2/8 | chr6 | TogoVar | |||||||
GABRR3_chr3_97980102_98040315 | 98026603 | T | TCATCATC others(11): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00408.hp2 HG00621.hp1 others(72): Show |
a0001a0002a0003 | a0001c0001a0001c0009a0002c0002others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(14): Show | a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0208 others(70): Show |
75 | 382 | 0.1963 | 18 | c.126 others(33): Show |
GABRR3 | ENSG00000183185.10 | transcript | ENST00000472788.6 | protein_coding | 2/9 | chr3 | TogoVar | |||||||
GAD1_chr2_170811887_170866151 | 170831634 | G | GTGTGTGT others(11): Show |
intron_variant | MODIFIER | HG01261.hp2 | a0001 | a0001c0004 | a0001c0004t0001 | a0001c0004t0001g0239 | 1 | 412 | 0.0024 | 18 | c.547 others(33): Show |
GAD1 | ENSG00000128683.14 | transcript | ENST00000358196.8 | protein_coding | 5/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
GAD2_chr10_26211774_26309558 | 26218551 | T | TCACACAC others(11): Show |
intron_variant | MODIFIER | NA18967.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0124 | 1 | 294 | 0.0034 | 18 | c.287 others(33): Show |
GAD2 | ENSG00000136750.13 | transcript | ENST00000376261.8 | protein_coding | 3/15 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
GAD2_chr10_26211774_26309558 | 26218551 | T | TCTCACAC others(11): Show |
intron_variant | MODIFIER | HG00741.hp2 NA18747.hp1 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003 | a0001c0001t0002g0155 a0001c0001t0003g0156 |
2 | 294 | 0.0068 | 18 | c.287 others(33): Show |
GAD2 | ENSG00000136750.13 | transcript | ENST00000376261.8 | protein_coding | 3/15 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
GAD2_chr10_26211774_26309558 | 26218551 | T | TCTCTCTC others(11): Show |
intron_variant | MODIFIER | HG02055.hp1 HG03209.hp1 |
a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0260 a0001c0001t0005g0261 |
2 | 294 | 0.0068 | 18 | c.287 others(33): Show |
GAD2 | ENSG00000136750.13 | transcript | ENST00000376261.8 | protein_coding | 3/15 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
GAD2_chr10_26211774_26309558 | 26295508 | G | GCACACAC others(11): Show |
intron_variant | MODIFIER | HG01993.hp2 HG02572.hp1 HG02615.hp1 others(1): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0005a0001c0003t0010 | a0001c0001t0001g0011 a0001c0001t0001g0021 a0001c0001t0005g0262 others(1): Show |
4 | 294 | 0.0136 | 18 | c.158 others(37): Show |
GAD2 | ENSG00000136750.13 | transcript | ENST00000376261.8 | protein_coding | 15/15 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
GADD45A_chr1_67680201_67693334 | 67682506 | A | AATATATA others(11): Show |
upstream_gene_variant | MODIFIER | HG00408.hp1 HG01891.hp2 HG02056.hp2 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0007 others(1): Show |
10 | 404 | 0.0248 | 18 | c.-29 others(29): Show |
GADD45A | ENSG00000116717.13 | transcript | ENST00000370986.9 | protein_coding | 2694 | chr1 | TogoVar | |||||||
GADL1_chr3_30721197_30899661 | 30741190 | A | ATATGTGT others(11): Show |
intron_variant | MODIFIER | HG01934.hp2 HG02280.hp2 NA19240.hp2 |
a0001 | a0001c0001 | a0001c0001t0008 | a0001c0001t0008g0101 a0001c0001t0008g0223 a0001c0001t0008g0224 |
3 | 282 | 0.0106 | 18 | c.139 others(39): Show |
GADL1 | ENSG00000144644.15 | transcript | ENST00000282538.10 | protein_coding | 14/14 | chr3 | TogoVar | |||||||
GADL1_chr3_30721197_30899661 | 30800806 | G | GACACACA others(11): Show |
intron_variant | MODIFIER | HG02258.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0014 | 1 | 282 | 0.0036 | 18 | c.125 others(33): Show |
GADL1 | ENSG00000144644.15 | transcript | ENST00000282538.10 | protein_coding | 12/14 | chr3 | TogoVar | |||||||
GADL1_chr3_30721197_30899661 | 30805734 | C | CTTTTTTT others(11): Show |
intron_variant | MODIFIER | HG02071.hp2 HG02080.hp1 HG02155.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(2): Show | a0001c0001t0001g0034 a0001c0001t0001g0050 a0001c0001t0001g0068 others(6): Show |
9 | 282 | 0.0319 | 18 | c.105 others(37): Show |
GADL1 | ENSG00000144644.15 | transcript | ENST00000282538.10 | protein_coding | 11/14 | chr3 | TogoVar | |||||||
GADL1_chr3_30721197_30899661 | 30839514 | C | CAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG02109.hp2 NA20129.hp2 |
a0001 | a0001c0001 | a0001c0001t0007a0001c0001t0017 | a0001c0001t0007g0115 a0001c0001t0017g0001 |
2 | 282 | 0.0071 | 18 | c.787 others(33): Show |
GADL1 | ENSG00000144644.15 | transcript | ENST00000282538.10 | protein_coding | 8/14 | chr3 | TogoVar | |||||||
GADL1_chr3_30721197_30899661 | 30867439 | T | TATATATA others(11): Show |
intron_variant | MODIFIER | HG00438.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0087 | 1 | 282 | 0.0036 | 18 | c.38- others(33): Show |
GADL1 | ENSG00000144644.15 | transcript | ENST00000282538.10 | protein_coding | 1/14 | chr3 | TogoVar | |||||||
GADL1_chr3_30721197_30899661 | 30895247 | T | TTGTGTGT others(11): Show |
upstream_gene_variant | MODIFIER | HG00438.hp1 HG01981.hp2 HG02071.hp2 others(15): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0090 others(15): Show |
18 | 282 | 0.0638 | 18 | c.-63 others(27): Show |
GADL1 | ENSG00000144644.15 | transcript | ENST00000282538.10 | protein_coding | 587 | chr3 | TogoVar | |||||||
GAGE12D_chrX_49536733_49554094 | 49543624 | A | ATGTGTGT others(11): Show |
intron_variant | MODIFIER | HG02280.hp2 HG03704.hp1 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0002a0002c0002t0004 | a0001c0001t0002g0051 a0002c0002t0004g0011 |
2 | 72 | 0.0278 | 18 | c.205 others(31): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 3/4 | chrX | TogoVar | |||||||
GAGE12D_chrX_49536733_49554094 | 49553180 | A | ATGTGTGT others(11): Show |
downstream_gene_variant | MODIFIER | HG02280.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0052 | 1 | 72 | 0.0139 | 18 | c.*41 others(29): Show |
GAGE12D | ENSG00000227488.3 | transcript | ENST00000405679.4 | protein_coding | 4087 | chrX | TogoVar | |||||||
GAGE12J_chrX_49317037_49334384 | 49325615 | A | ACACATAC others(11): Show |
intron_variant | MODIFIER | NA19072.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0067 | 1 | 194 | 0.0052 | 18 | c.206 others(35): Show |
GAGE12J | ENSG00000224659.3 | transcript | ENST00000442437.3 | protein_coding | 3/4 | chrX | TogoVar | |||||||
GAGE13_chrX_49326582_49343949 | 49343040 | A | ATGTGTGT others(11): Show |
downstream_gene_variant | MODIFIER | HG01928.hp1 HG03710.hp1 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0012 a0001c0002t0001g0016 |
2 | 93 | 0.0215 | 18 | c.*41 others(29): Show |
GAGE13 | ENSG00000274274.2 | transcript | ENST00000612958.2 | protein_coding | 4092 | chrX | TogoVar | |||||||
GAK_chr4_844277_937316 | 902596 | C | CAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG01243.hp1 HG02145.hp2 |
a0001 | a0001c0002 | a0001c0002t0002a0001c0002t0003 | a0001c0002t0002g0168 a0001c0002t0003g0375 |
2 | 390 | 0.0051 | 18 | c.525 others(35): Show |
GAK | ENSG00000178950.18 | transcript | ENST00000314167.9 | protein_coding | 5/27 | chr4 | TogoVar | |||||||
GAL3ST1_chr22_30549635_30579665 | 30570977 | T | TACACACA others(11): Show |
intron_variant | MODIFIER | HG00423.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0107 | 1 | 452 | 0.0022 | 18 | c.-12 others(37): Show |
GAL3ST1 | ENSG00000128242.13 | transcript | ENST00000406361.6 | protein_coding | 1/3 | chr22 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241786137 | T | TTGTGTGT others(11): Show |
intron_variant | MODIFIER | HG01346.hp1 HG02004.hp2 HG02080.hp1 others(5): Show |
a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0007 a0003c0003t0001g0232 a0003c0003t0001g0233 others(2): Show |
8 | 314 | 0.0255 | 18 | c.29+ others(33): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
GAL3ST4_chr7_100154244_100173617 | 100168003 | G | GACACACA others(11): Show |
intron_variant | MODIFIER | HG02895.hp1 | a0002 | a0002c0003 | a0002c0003t0003 | a0002c0003t0003g0156 | 1 | 402 | 0.0025 | 18 | c.-18 others(35): Show |
GAL3ST4 | ENSG00000197093.11 | transcript | ENST00000360039.9 | protein_coding | 1/3 | chr7 | TogoVar | |||||||
GALC_chr14_87928014_87998182 | 87936896 | C | CTATATAT others(11): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00408.hp1 others(31): Show |
a0001a0002a0010others(4): Show | a0001c0001a0001c0027a0002c0002others(5): Show | a0001c0001t0001a0001c0027t0001a0002c0002t0002others(5): Show | a0001c0001t0001g0001 a0001c0001t0001g0013 a0001c0001t0001g0056 others(26): Show |
34 | 370 | 0.0919 | 18 | c.191 others(37): Show |
GALC | ENSG00000054983.17 | transcript | ENST00000261304.7 | protein_coding | 16/16 | chr14 | TogoVar | |||||||
GALK2_chr15_49165247_49336882 | 49178195 | C | CTATATAT others(11): Show |
intron_variant | MODIFIER | HG00280.hp1 HG00642.hp2 NA18612.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0006a0001c0002t0003a0001c0002t0004others(1): Show | a0001c0001t0006g0029 a0001c0001t0006g0030 a0001c0002t0003g0158 others(3): Show |
6 | 348 | 0.0172 | 18 | c.53+ others(33): Show |
GALK2 | ENSG00000156958.15 | transcript | ENST00000560031.6 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GALK2_chr15_49165247_49336882 | 49210973 | T | TCACACAC others(11): Show |
intron_variant | MODIFIER | NA18522.hp1 | a0001 | a0001c0002 | a0001c0002t0025 | a0001c0002t0025g0131 | 1 | 348 | 0.0029 | 18 | c.143 others(35): Show |
GALK2 | ENSG00000156958.15 | transcript | ENST00000560031.6 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GALK2_chr15_49165247_49336882 | 49228687 | A | ATATATAT others(11): Show |
intron_variant | MODIFIER | NA18747.hp2 | a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0182 | 1 | 348 | 0.0029 | 18 | c.267 others(35): Show |
GALK2 | ENSG00000156958.15 | transcript | ENST00000560031.6 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GALM_chr2_38661114_38739765 | 38703054 | T | TTATATAT others(11): Show |
intron_variant | MODIFIER | HG00597.hp1 HG00642.hp2 HG02809.hp2 others(1): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0024others(1): Show | a0001c0001t0001g0302 a0001c0001t0003g0067 a0001c0001t0024g0120 others(1): Show |
4 | 328 | 0.0122 | 18 | c.634 others(37): Show |
GALM | ENSG00000143891.17 | transcript | ENST00000272252.10 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
GALM_chr2_38661114_38739765 | 38703092 | A | ATATATAT others(11): Show |
intron_variant | MODIFIER | HG02622.hp2 HG02683.hp1 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0005 | a0001c0001t0001g0086 a0001c0003t0005g0223 |
2 | 328 | 0.0061 | 18 | c.634 others(37): Show |
GALM | ENSG00000143891.17 | transcript | ENST00000272252.10 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
GALNT10_chr5_154185733_154425984 | 154219834 | T | TCACACAC others(11): Show |
intron_variant | MODIFIER | HG00408.hp1 HG01070.hp1 HG01071.hp2 others(11): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0002a0001c0001t0007a0001c0002t0007others(5): Show | a0001c0001t0002g0165 a0001c0001t0002g0167 a0001c0001t0002g0168 others(11): Show |
14 | 236 | 0.0593 | 18 | c.159 others(37): Show |
GALNT10 | ENSG00000164574.16 | transcript | ENST00000297107.11 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
GALNT10_chr5_154185733_154425984 | 154219836 | T | TCACACAC others(11): Show |
intron_variant | MODIFIER | NA18969.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0076 | 1 | 236 | 0.0042 | 18 | c.159 others(37): Show |
GALNT10 | ENSG00000164574.16 | transcript | ENST00000297107.11 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
GALNT10_chr5_154185733_154425984 | 154330908 | G | GGTGTGTG others(11): Show |
intron_variant | MODIFIER | HG01192.hp1 HG02155.hp1 |
a0001 | a0001c0001a0001c0013 | a0001c0001t0007a0001c0013t0001 | a0001c0001t0007g0102 a0001c0013t0001g0187 |
2 | 236 | 0.0085 | 18 | c.568 others(35): Show |
GALNT10 | ENSG00000164574.16 | transcript | ENST00000297107.11 | protein_coding | 4/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
GALNT10_chr5_154185733_154425984 | 154378317 | T | TATCATCA others(11): Show |
intron_variant | MODIFIER | HG00639.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0146 | 1 | 236 | 0.0042 | 18 | c.754 others(35): Show |
GALNT10 | ENSG00000164574.16 | transcript | ENST00000297107.11 | protein_coding | 5/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
GALNT10_chr5_154185733_154425984 | 154416480 | T | TACACACA others(11): Show |
intron_variant | MODIFIER | HG02572.hp1 | a0001 | a0001c0001 | a0001c0001t0018 | a0001c0001t0018g0176 | 1 | 236 | 0.0042 | 18 | c.165 others(35): Show |
GALNT10 | ENSG00000164574.16 | transcript | ENST00000297107.11 | protein_coding | 11/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
GALNT11_chr7_152020674_152127340 | 152113712 | C | CTTTTTTT others(11): Show |
intron_variant | MODIFIER | NA19000.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0226 | 1 | 284 | 0.0035 | 18 | c.123 others(35): Show |
GALNT11 | ENSG00000178234.13 | transcript | ENST00000430044.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
GALNT12_chr9_98802670_98855081 | 98821624 | C | CAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG00609.hp1 HG00738.hp2 HG01106.hp1 others(27): Show |
a0001a0002a0008 | a0001c0001a0001c0002a0002c0003others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(7): Show | a0001c0001t0001g0023 a0001c0001t0001g0075 a0001c0001t0001g0155 others(26): Show |
30 | 376 | 0.0798 | 18 | c.372 others(35): Show |
GALNT12 | ENSG00000119514.7 | transcript | ENST00000375011.4 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
GALNT12_chr9_98802670_98855081 | 98852172 | T | TACCACCC others(11): Show |
downstream_gene_variant | MODIFIER | NA19059.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0089 | 1 | 376 | 0.0027 | 18 | c.*30 others(29): Show |
GALNT12 | ENSG00000119514.7 | transcript | ENST00000375011.4 | protein_coding | 2092 | chr9 | TogoVar |