Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
C9orf153_chr9_86215265_86264657	86251914	T T	TACACACA others(11): Show TACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp1 HG00597.hp1 others(103): Show HG00140.hp2 HG00280.hp1 HG00597.hp1 HG00642.hp1 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01243.hp1 HG01243.hp2 HG01261.hp1 HG01346.hp1 HG01433.hp2 HG01515.hp2 HG01517.hp2 HG01884.hp2 HG01978.hp1 HG01978.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02165.hp2 HG02257.hp1 HG02293.hp1 HG02630.hp1 HG02698.hp2 HG02738.hp2 HG02896.hp2 HG02922.hp2 HG02965.hp2 HG03017.hp1 HG03041.hp2 HG03195.hp2 HG03225.hp1 HG03239.hp1 HG03516.hp1 HG03654.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG03831.hp2 HG03834.hp1 HG03942.hp2 HG04228.hp1 NA18522.hp2 NA18747.hp2 NA18940.hp2 NA18942.hp1 NA18945.hp2 NA18946.hp2 NA18947.hp1 NA18948.hp2 NA18950.hp1 NA18950.hp2 NA18953.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp2 NA18960.hp2 NA18966.hp2 NA18972.hp1 NA18975.hp2 NA18977.hp1 NA18980.hp1 NA18987.hp2 NA18988.hp1 NA18989.hp1 NA18989.hp2 NA18991.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp2 NA18999.hp1 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19004.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19011.hp2 NA19056.hp1 NA19056.hp2 NA19062.hp2 NA19064.hp2 NA19066.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19076.hp2 NA19079.hp1 NA19079.hp2 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19091.hp2 NA20300.hp1 NA20300.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0016 a0001c0001t0019 a0002c0002t0006 a0002c0002t0009	a0001c0001t0001g0006 a0001c0001t0001g0023 a0001c0001t0001g0024 others(93): Show a0001c0001t0001g0006 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0215 a0001c0001t0001g0228 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0234 a0001c0001t0001g0243 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0257 a0001c0001t0001g0284 a0001c0001t0001g0286 a0001c0001t0001g0287 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0292 a0001c0001t0001g0311 a0001c0001t0001g0320 a0001c0001t0001g0324 a0001c0001t0001g0332 a0001c0001t0001g0333 a0001c0001t0001g0334 a0001c0001t0001g0335 a0001c0001t0001g0339 a0001c0001t0002g0004 a0001c0001t0002g0016 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0033 a0001c0001t0002g0034 a0001c0001t0002g0037 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0064 a0001c0001t0002g0070 a0001c0001t0002g0095 a0001c0001t0002g0096 a0001c0001t0002g0097 a0001c0001t0002g0101 a0001c0001t0002g0103 a0001c0001t0002g0104 a0001c0001t0002g0105 a0001c0001t0002g0109 a0001c0001t0002g0110 a0001c0001t0002g0117 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0121 a0001c0001t0002g0123 a0001c0001t0002g0124 a0001c0001t0002g0125 a0001c0001t0002g0126 a0001c0001t0002g0127 a0001c0001t0002g0129 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0160 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0178 a0001c0001t0002g0179 a0001c0001t0003g0213 a0001c0001t0003g0285 a0001c0001t0003g0290 a0001c0001t0007g0031 a0001c0001t0007g0338 a0001c0001t0010g0157 a0001c0001t0011g0291 a0001c0001t0012g0128 a0001c0001t0013g0054 a0001c0001t0014g0100 a0001c0001t0016g0122 a0001c0001t0019g0310 a0002c0002t0006g0111 a0002c0002t0009g0169	106	193	0.5492	18	c.-27 others(35): Show c.-27+7618_-27+7635dupGTGTGTGTGTGTGTGTGT	C9orf153	ENSG00000187753.13	transcript	ENST00000339137.7	protein_coding	1/3			chr9	TogoVar
C9orf50_chr9_129607225_129626101	129610190	G G	GGGGAGGA others(11): Show GGGGAGGAGGGGGGGAGGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01943.hp1 HG01943.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	408	0.0025	18	c.21 others(29): Show c.2139_*2156dupTCCTCCCCCCCTCCTCCC	C9orf50	ENSG00000179058.8	transcript	ENST00000372478.5	protein_coding		2034		chr9	TogoVar
C9orf72_chr9_27541546_27578481	27573523	C C	CGCCCCGG others(11): Show CGCCCCGGCCCCGGCCCCG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00423.hp1 HG00438.hp2 others(52): Show HG00099.hp1 HG00423.hp1 HG00438.hp2 HG00639.hp2 HG00733.hp1 HG01346.hp2 HG01884.hp2 HG02015.hp1 HG02071.hp1 HG02280.hp2 HG02683.hp2 HG02738.hp1 HG02976.hp1 HG03017.hp1 HG03225.hp1 HG03239.hp1 HG03490.hp1 HG03654.hp2 HG03669.hp1 HG03831.hp1 HG04204.hp2 HG06807.hp1 NA18612.hp2 NA18906.hp1 NA18940.hp2 NA18941.hp2 NA18955.hp1 NA18956.hp2 NA18961.hp1 NA18968.hp1 NA18974.hp1 NA18977.hp2 NA18978.hp2 NA18982.hp2 NA18983.hp2 NA18999.hp2 NA19000.hp2 NA19001.hp2 NA19006.hp2 NA19007.hp2 NA19043.hp2 NA19064.hp1 NA19065.hp1 NA19074.hp2 NA19075.hp1 NA19078.hp1 NA19078.hp2 NA19083.hp1 NA19084.hp2 NA19088.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0008 others(1): Show a0001c0001 a0001c0002 a0001c0008 a0002c0003	a0001c0001t0003 a0001c0001t0018 a0001c0002t0001 others(5): Show a0001c0001t0003 a0001c0001t0018 a0001c0002t0001 a0001c0002t0002 a0001c0002t0005 a0001c0002t0016 a0001c0008t0002 a0002c0003t0002	a0001c0001t0003g0042 a0001c0001t0018g0175 a0001c0002t0001g0220 others(37): Show a0001c0001t0003g0042 a0001c0001t0018g0175 a0001c0002t0001g0220 a0001c0002t0002g0004 a0001c0002t0002g0006 a0001c0002t0002g0009 a0001c0002t0002g0026 a0001c0002t0002g0060 a0001c0002t0002g0061 a0001c0002t0002g0062 a0001c0002t0002g0172 a0001c0002t0002g0173 a0001c0002t0002g0177 a0001c0002t0002g0206 a0001c0002t0002g0207 a0001c0002t0002g0208 a0001c0002t0002g0209 a0001c0002t0002g0210 a0001c0002t0002g0211 a0001c0002t0002g0212 a0001c0002t0002g0213 a0001c0002t0002g0214 a0001c0002t0002g0215 a0001c0002t0002g0216 a0001c0002t0002g0218 a0001c0002t0002g0219 a0001c0002t0002g0222 a0001c0002t0002g0224 a0001c0002t0002g0225 a0001c0002t0002g0226 a0001c0002t0002g0227 a0001c0002t0002g0228 a0001c0002t0002g0229 a0001c0002t0002g0237 a0001c0002t0005g0258 a0001c0002t0005g0266 a0001c0002t0005g0267 a0001c0002t0016g0221 a0001c0008t0002g0223 a0002c0003t0002g0007	55	61	0.9016	18	c.-15 others(27): Show c.-155_-138dupCGGGGCCGGGGCCGGGGC	C9orf72	ENSG00000147894.17	transcript	ENST00000380003.8	protein_coding		43		chr9	TogoVar
C9orf78_chr9_129822290_129840275	129824606	A A	AAATAATA others(11): Show AAATAATAATAATAATAAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01515.hp2 HG01517.hp1 NA19056.hp2 others(1): Show HG01515.hp2 HG01517.hp1 NA19056.hp2 NA20805.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0002 a0001c0002t0002g0017 a0001c0002t0002g0002 a0001c0002t0002g0017	4	241	0.0166	18	c.35 others(29): Show c.3554_*3555insATTATTATTATTATTATT	C9orf78	ENSG00000136819.15	transcript	ENST00000372447.7	protein_coding		2683		chr9	TogoVar
C9orf85_chr9_71906639_71978457	71921925	T T	TTTATTAT others(11): Show TTTATTATTATTATTATTA	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02970.hp2 HG02258.hp2 HG02970.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0008 a0001c0002t0008	a0001c0002t0008g0024 a0001c0002t0008g0026 a0001c0002t0008g0024 a0001c0002t0008g0026	2	231	0.0087	18	c.102 others(37): Show c.102+10091_102+10092insATTATTATTATTATTATT	C9orf85	ENSG00000155621.15	transcript	ENST00000334731.7	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr9	TogoVar
CA10_chr17_51625320_52163714	51707671	A A	ATGTGTGT others(11): Show ATGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01884.hp2 HG02258.hp1 others(11): Show HG01081.hp1 HG01884.hp2 HG02258.hp1 HG02723.hp1 HG02818.hp2 HG03704.hp2 HG03710.hp2 HG03834.hp2 HG04199.hp1 HG04228.hp2 NA18906.hp2 NA18962.hp2 NA18963.hp2 NA19058.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0002t0001	a0001c0001t0001g0012 a0001c0001t0001g0027 a0001c0001t0001g0049 others(11): Show a0001c0001t0001g0012 a0001c0001t0001g0027 a0001c0001t0001g0049 a0001c0001t0001g0125 a0001c0001t0002g0050 a0001c0001t0002g0056 a0001c0001t0002g0065 a0001c0001t0002g0075 a0001c0001t0003g0030 a0001c0001t0003g0073 a0001c0002t0001g0023 a0001c0002t0001g0036 a0001c0002t0001g0121 a0001c0002t0001g0145	14	28	0.5000	18	c.465 others(37): Show c.465+39944_465+39961dupCACACACACACACACACA	CA10	ENSG00000154975.14	transcript	ENST00000451037.7	protein_coding	4/8			chr17	TogoVar
CA10_chr17_51625320_52163714	51831667	A A	AAGCAGCA others(11): Show AAGCAGCAGCAGCAGCAGC	intron_variant intron_variant	MODIFIER	HG03710.hp1 HG03710.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0113 a0001c0002t0001g0113	1	37	0.0270	18	c.280 others(37): Show c.280-83867_280-83850dupGCTGCTGCTGCTGCTGCT	CA10	ENSG00000154975.14	transcript	ENST00000451037.7	protein_coding	3/8			chr17	TogoVar
CA10_chr17_51625320_52163714	51831687	G G	GCAGCAGC others(11): Show GCAGCAGCAGCATCAGCAT	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0010 a0001c0003t0001g0010	1	154	0.0065	18	c.280 others(37): Show c.280-83870_280-83869insATGCTGATGCTGCTGCTG	CA10	ENSG00000154975.14	transcript	ENST00000451037.7	protein_coding	3/8			chr17	TogoVar
CA10_chr17_51625320_52163714	51831690	G G	GCAGCAGC others(11): Show GCAGCAGCAGCATCAGCAT	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0080 a0001c0001t0002g0080	1	147	0.0068	18	c.280 others(37): Show c.280-83873_280-83872insATGCTGATGCTGCTGCTG	CA10	ENSG00000154975.14	transcript	ENST00000451037.7	protein_coding	3/8			chr17	TogoVar
CA10_chr17_51625320_52163714	51849189	A A	ATATATAC others(11): Show ATATATACATATATGTGTG	intron_variant intron_variant	MODIFIER	HG04184.hp1 HG04184.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0116 a0001c0001t0001g0116	1	154	0.0065	18	c.279 others(37): Show c.279+81800_279+81801insCACACATATATGTATATA	CA10	ENSG00000154975.14	transcript	ENST00000451037.7	protein_coding	3/8			chr17	TogoVar
CA12_chr15_63316378_63386846	63376557	C C	CCTTTCTT others(11): Show CCTTTCTTTCTTTCTCTTT	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02056.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0092 a0001c0001t0003g0092	1	147	0.0068	18	c.86- others(31): Show c.86-880_86-879insAAAGAGAAAGAAAGAAAG	CA12	ENSG00000074410.14	transcript	ENST00000178638.8	protein_coding	1/10			chr15	TogoVar
CA12_chr15_63316378_63386846	63376600	T T	TTCTTTCT others(11): Show TTCTTTCTTTCTTTCTCTC	intron_variant intron_variant	MODIFIER	NA19074.hp2 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0315 a0001c0001t0005g0315	1	221	0.0045	18	c.86- others(31): Show c.86-923_86-922insGAGAGAAAGAAAGAAAGA	CA12	ENSG00000074410.14	transcript	ENST00000178638.8	protein_coding	1/10			chr15	TogoVar
CA12_chr15_63316378_63386846	63376600	T T	TTCTTTCT others(11): Show TTCTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00408.hp2 HG00544.hp2 others(30): Show HG00323.hp1 HG00408.hp2 HG00544.hp2 HG00673.hp2 HG01346.hp1 HG01361.hp2 HG01496.hp1 HG01981.hp1 HG01981.hp2 HG02071.hp1 HG02083.hp2 HG02165.hp2 HG02273.hp1 HG02523.hp1 HG02602.hp2 HG03927.hp1 HG03942.hp1 NA18943.hp2 NA18949.hp2 NA18959.hp1 NA18962.hp2 NA18965.hp1 NA18965.hp2 NA18974.hp1 NA18975.hp2 NA18977.hp1 NA18982.hp1 NA19012.hp2 NA19067.hp2 NA19068.hp1 NA19077.hp2 NA19079.hp1 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0001c0001t0021 a0001c0001t0028 a0001c0001t0035 a0001c0001t0046 a0001c0001t0060	a0001c0001t0001g0244 a0001c0001t0002g0234 a0001c0001t0002g0235 others(29): Show a0001c0001t0001g0244 a0001c0001t0002g0234 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0287 a0001c0001t0002g0288 a0001c0001t0002g0289 a0001c0001t0002g0290 a0001c0001t0002g0297 a0001c0001t0002g0323 a0001c0001t0003g0010 a0001c0001t0003g0241 a0001c0001t0003g0292 a0001c0001t0003g0295 a0001c0001t0003g0298 a0001c0001t0004g0134 a0001c0001t0004g0239 a0001c0001t0004g0299 a0001c0001t0005g0322 a0001c0001t0006g0294 a0001c0001t0006g0319 a0001c0001t0014g0242 a0001c0001t0014g0293 a0001c0001t0015g0240 a0001c0001t0016g0243 a0001c0001t0021g0140 a0001c0001t0021g0141 a0001c0001t0028g0238 a0001c0001t0035g0135 a0001c0001t0046g0296 a0001c0001t0060g0291	33	253	0.1304	18	c.86- others(31): Show c.86-923_86-922insGAAAGAAAGAAAGAAAGA	CA12	ENSG00000074410.14	transcript	ENST00000178638.8	protein_coding	1/10			chr15	TogoVar
CA2_chr8_85459007_85486493	85485728	C C	CATATATA others(11): Show CATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02897.hp1 HG03831.hp2 HG02897.hp1 HG03831.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0040 a0001c0002t0001g0095 a0001c0002t0001g0040 a0001c0002t0001g0095	2	40	0.0500	18	c.49 others(29): Show c.4939_*4940insATATATATATATATATAT	CA2	ENSG00000104267.10	transcript	ENST00000285379.10	protein_coding		4236		chr8	TogoVar
CA4_chr17_60144973_60164546	60155498	T T	TACACACA others(11): Show TACACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0123 a0001c0001t0001g0123	1	312	0.0032	18	c.112 others(33): Show c.112+140_112+157dupACACACACACACACACAC	CA4	ENSG00000167434.10	transcript	ENST00000300900.9	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr17	TogoVar
CA5A_chr16_87883013_87941529	87906231	C C	CCTCGTGT others(11): Show CCTCGTGTCACCCGCCTTG	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00438.hp2 HG00639.hp2 others(115): Show HG00323.hp2 HG00438.hp2 HG00639.hp2 HG00673.hp1 HG01069.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01099.hp1 HG01109.hp1 HG01109.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01433.hp2 HG01515.hp2 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01993.hp1 HG02055.hp2 HG02056.hp1 HG02083.hp2 HG02132.hp2 HG02145.hp2 HG02155.hp2 HG02165.hp1 HG02257.hp2 HG02258.hp2 HG02273.hp2 HG02280.hp2 HG02486.hp1 HG02523.hp2 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03209.hp1 HG03239.hp2 HG03453.hp2 HG03491.hp1 HG03492.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp2 HG03710.hp2 HG03831.hp2 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04199.hp2 HG04204.hp1 NA18522.hp1 NA18522.hp2 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18944.hp2 NA18953.hp2 NA18955.hp2 NA18963.hp1 NA18964.hp1 NA18967.hp2 NA18969.hp1 NA18975.hp1 NA18979.hp2 NA18992.hp1 NA18997.hp2 NA19000.hp2 NA19005.hp2 NA19007.hp2 NA19011.hp2 NA19030.hp2 NA19043.hp2 NA19064.hp1 NA19066.hp2 NA19070.hp1 NA19074.hp2 NA19077.hp2 NA19082.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA21309.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0001c0003 others(8): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0014 a0002c0005 a0002c0010 a0002c0011 a0003c0006 a0003c0009 a0004c0008	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 others(11): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0002t0002 a0001c0003t0002 a0001c0004t0001 a0001c0014t0001 a0002c0005t0001 a0002c0005t0003 a0002c0010t0002 a0002c0011t0002 a0003c0006t0001 a0003c0009t0002 a0004c0008t0001	a0001c0001t0001g0041 a0001c0001t0001g0044 a0001c0001t0001g0046 others(115): Show a0001c0001t0001g0041 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0057 a0001c0001t0001g0062 a0001c0001t0001g0065 a0001c0001t0001g0070 a0001c0001t0001g0073 a0001c0001t0001g0090 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0128 a0001c0001t0001g0138 a0001c0001t0001g0176 a0001c0001t0001g0183 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0198 a0001c0001t0001g0230 a0001c0001t0001g0232 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0311 a0001c0001t0001g0334 a0001c0001t0001g0358 a0001c0001t0001g0363 a0001c0001t0001g0364 a0001c0001t0001g0376 a0001c0001t0001g0379 a0001c0001t0001g0381 a0001c0001t0001g0384 a0001c0001t0003g0050 a0001c0001t0003g0066 a0001c0001t0003g0229 a0001c0001t0003g0383 a0001c0002t0001g0248 a0001c0002t0002g0033 a0001c0002t0002g0034 a0001c0002t0002g0074 a0001c0002t0002g0075 a0001c0002t0002g0077 a0001c0002t0002g0088 a0001c0002t0002g0096 a0001c0002t0002g0114 a0001c0002t0002g0149 a0001c0002t0002g0158 a0001c0002t0002g0159 a0001c0002t0002g0173 a0001c0002t0002g0178 a0001c0002t0002g0182 a0001c0002t0002g0188 a0001c0002t0002g0203 a0001c0002t0002g0210 a0001c0002t0002g0212 a0001c0002t0002g0215 a0001c0002t0002g0217 a0001c0002t0002g0227 a0001c0002t0002g0231 a0001c0002t0002g0240 a0001c0002t0002g0246 a0001c0002t0002g0252 a0001c0002t0002g0258 a0001c0002t0002g0259 a0001c0002t0002g0260 a0001c0002t0002g0269 a0001c0002t0002g0275 a0001c0002t0002g0281 a0001c0002t0002g0284 a0001c0002t0002g0285 a0001c0002t0002g0294 a0001c0002t0002g0296 a0001c0002t0002g0297 a0001c0002t0002g0302 a0001c0002t0002g0305 a0001c0002t0002g0307 a0001c0002t0002g0323 a0001c0002t0002g0330 a0001c0002t0002g0332 a0001c0002t0002g0342 a0001c0002t0002g0353 a0001c0002t0002g0386 a0001c0002t0002g0390 a0001c0002t0002g0391 a0001c0003t0002g0042 a0001c0003t0002g0055 a0001c0003t0002g0068 a0001c0003t0002g0378 a0001c0003t0002g0380 a0001c0003t0002g0382 a0001c0004t0001g0132 a0001c0004t0001g0152 a0001c0004t0001g0272 a0001c0004t0001g0278 a0001c0004t0001g0322 a0001c0004t0001g0336 a0001c0004t0001g0366 a0001c0004t0001g0368 a0001c0014t0001g0103 a0002c0005t0001g0015 a0002c0005t0001g0017 a0002c0005t0001g0022 a0002c0005t0001g0023 a0002c0005t0001g0024 a0002c0005t0001g0025 a0002c0005t0003g0021 a0002c0010t0002g0019 a0002c0011t0002g0020 a0003c0006t0001g0004 a0003c0006t0001g0010 a0003c0006t0001g0011 a0003c0009t0002g0009 a0004c0008t0001g0051 a0004c0008t0001g0053	118	395	0.2987	18	c.341 others(35): Show c.341-1328_341-1327insCAAGGCGGGTGACACGAG	CA5A	ENSG00000174990.8	transcript	ENST00000649794.3	protein_coding	2/6			chr16	TogoVar
CA5A_chr16_87883013_87941529	87906231	C C	CCTCGTTT others(11): Show CCTCGTTTCACCCGCCTTG	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02559.hp1 HG02615.hp1 HG02451.hp1 HG02559.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0060 a0001c0001t0001g0078 a0001c0001t0003g0287 a0001c0001t0001g0060 a0001c0001t0001g0078 a0001c0001t0003g0287	3	280	0.0107	18	c.341 others(35): Show c.341-1328_341-1327insCAAGGCGGGTGAAACGAG	CA5A	ENSG00000174990.8	transcript	ENST00000649794.3	protein_coding	2/6			chr16	TogoVar
CA5A_chr16_87883013_87941529	87937799	C C	CTTTCTTT others(11): Show CTTTCTTTCTTTCTTTCTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0057 a0001c0001t0001g0057	1	357	0.0028	18	c.-13 others(29): Show c.-1350_-1349insAAGAAAGAAAGAAAGAAA	CA5A	ENSG00000174990.8	transcript	ENST00000649794.3	protein_coding		1271		chr16	TogoVar
CA5A_chr16_87883013_87941529	87937801	T T	TTCTTTCT others(11): Show TTCTTTCTTTCTTTCTTTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02055.hp2 HG03225.hp2 HG02055.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0058 a0001c0001t0001g0381 a0001c0001t0001g0058 a0001c0001t0001g0381	2	394	0.0051	18	c.-13 others(29): Show c.-1352_-1351insGAAAGAAAGAAAGAAAGA	CA5A	ENSG00000174990.8	transcript	ENST00000649794.3	protein_coding		1273		chr16	TogoVar
CA5A_chr16_87883013_87941529	87939514	T T	TAGATGAT others(11): Show TAGATGATAGATGATAGAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02109.hp2 HG02965.hp1 HG02976.hp1 others(2): Show HG02109.hp2 HG02965.hp1 HG02976.hp1 HG03195.hp2 HG03225.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0005 a0001c0001 a0002c0005	a0001c0001t0001 a0001c0001t0003 a0002c0005t0001 a0001c0001t0001 a0001c0001t0003 a0002c0005t0001	a0001c0001t0001g0028 a0001c0001t0001g0058 a0001c0001t0001g0064 others(2): Show a0001c0001t0001g0028 a0001c0001t0001g0058 a0001c0001t0001g0064 a0001c0001t0003g0383 a0002c0005t0001g0018	5	368	0.0136	18	c.-30 others(29): Show c.-3065_-3064insGTCTATCATCTATCATCT	CA5A	ENSG00000174990.8	transcript	ENST00000649794.3	protein_coding		2986		chr16	TogoVar
CA5A_chr16_87883013_87941529	87939514	T T	TAGATGAT others(11): Show TAGATGATAGGTGATAGAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp2 HG01070.hp1 HG01109.hp2 others(27): Show HG00323.hp2 HG01070.hp1 HG01109.hp2 HG01167.hp2 HG01169.hp1 HG01175.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG02055.hp1 HG02109.hp1 HG02145.hp2 HG02257.hp1 HG02280.hp1 HG02451.hp1 HG02647.hp2 HG02809.hp1 HG02886.hp1 HG02922.hp1 HG02965.hp2 HG03041.hp2 HG03139.hp1 HG03209.hp1 HG03491.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03540.hp2 NA19240.hp2 NA20300.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0004c0008	a0001c0001t0001 a0001c0001t0003 a0001c0002t0002 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0002 a0001c0003t0002 a0004c0008t0001	a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 others(27): Show a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0052 a0001c0001t0001g0063 a0001c0001t0001g0065 a0001c0001t0001g0067 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0078 a0001c0001t0001g0358 a0001c0001t0001g0359 a0001c0001t0001g0360 a0001c0001t0001g0361 a0001c0001t0003g0050 a0001c0001t0003g0066 a0001c0002t0002g0074 a0001c0002t0002g0075 a0001c0002t0002g0077 a0001c0003t0002g0042 a0001c0003t0002g0068 a0001c0003t0002g0076 a0004c0008t0001g0051	30	393	0.0763	18	c.-30 others(29): Show c.-3065_-3064insGTCTATCACCTATCATCT	CA5A	ENSG00000174990.8	transcript	ENST00000649794.3	protein_coding		2986		chr16	TogoVar
CA6_chr1_8940868_8980092	8959931	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG03209.hp1 NA20129.hp1 HG02145.hp2 HG03209.hp1 NA20129.hp1	a0002 a0004 a0006 a0002 a0004 a0006	a0002c0003 a0004c0007 a0006c0012 a0002c0003 a0004c0007 a0006c0012	a0002c0003t0001 a0004c0007t0001 a0006c0012t0001 a0002c0003t0001 a0004c0007t0001 a0006c0012t0001	a0002c0003t0001g0071 a0004c0007t0001g0201 a0006c0012t0001g0308 a0002c0003t0001g0071 a0004c0007t0001g0201 a0006c0012t0001g0308	3	209	0.0144	18	c.501 others(33): Show c.501+931_501+948dupAAAAAAAAAAAAAAAAAA	CA6	ENSG00000131686.15	transcript	ENST00000377443.7	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr1	TogoVar
CA6_chr1_8940868_8980092	8960789	C C	CACACACA others(11): Show CACACACACACACATATAT	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0004 a0004	a0004c0007 a0004c0007	a0004c0007t0001 a0004c0007t0001	a0004c0007t0001g0297 a0004c0007t0001g0297	1	32	0.0313	18	c.501 others(35): Show c.501+1788_501+1789insCACACACACACATATATA	CA6	ENSG00000131686.15	transcript	ENST00000377443.7	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr1	TogoVar
CA6_chr1_8940868_8980092	8960789	C C	CACACACA others(11): Show CACACACACACATATATAT	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01891.hp2 HG02451.hp2 others(3): Show HG01109.hp2 HG01891.hp2 HG02451.hp2 HG03486.hp1 NA18522.hp2 NA19240.hp2	a0001 a0005 a0007 a0001 a0005 a0007	a0001c0001 a0005c0009 a0007c0014 a0001c0001 a0005c0009 a0007c0014	a0001c0001t0001 a0005c0009t0001 a0007c0014t0006 others(1): Show a0001c0001t0001 a0005c0009t0001 a0007c0014t0006 a0007c0014t0010	a0001c0001t0001g0384 a0005c0009t0001g0291 a0005c0009t0001g0295 others(3): Show a0001c0001t0001g0384 a0005c0009t0001g0291 a0005c0009t0001g0295 a0007c0014t0006g0389 a0007c0014t0006g0390 a0007c0014t0010g0391	6	37	0.1622	18	c.501 others(35): Show c.501+1788_501+1789insCACACACACATATATATA	CA6	ENSG00000131686.15	transcript	ENST00000377443.7	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr1	TogoVar
CA6_chr1_8940868_8980092	8960789	C C	CACACACA others(11): Show CACACACACATATATATAT	intron_variant intron_variant	MODIFIER	HG01934.hp2 NA18522.hp1 NA18985.hp2 others(2): Show HG01934.hp2 NA18522.hp1 NA18985.hp2 NA19057.hp2 NA19070.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0016 a0003c0006 a0001c0001 a0001c0016 a0003c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0012 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0012 a0001c0016t0001 a0003c0006t0001	a0001c0001t0001g0221 a0001c0001t0002g0363 a0001c0001t0012g0281 others(2): Show a0001c0001t0001g0221 a0001c0001t0002g0363 a0001c0001t0012g0281 a0001c0016t0001g0369 a0003c0006t0001g0165	5	36	0.1389	18	c.501 others(35): Show c.501+1788_501+1789insCACACACATATATATATA	CA6	ENSG00000131686.15	transcript	ENST00000377443.7	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr1	TogoVar
CA6_chr1_8940868_8980092	8973783	T T	TTTCTTTC others(11): Show TTTCTTTCTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG02897.hp1	a0004 a0004	a0004c0008 a0004c0008	a0004c0008t0001 a0004c0008t0001	a0004c0008t0001g0217 a0004c0008t0001g0217	1	449	0.0022	18	c.845 others(33): Show c.845-839_845-838insTTCTTTCTTCTTTCTTTC	CA6	ENSG00000131686.15	transcript	ENST00000377443.7	protein_coding	7/7			chr1	TogoVar
CA6_chr1_8940868_8980092	8977514	A A	ACATGGTG others(11): Show ACATGGTGAAACCCCATCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp2 HG03927.hp1 HG00639.hp2 HG03927.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0006 a0001c0001 a0003c0006	a0001c0001t0001 a0003c0006t0001 a0001c0001t0001 a0003c0006t0001	a0001c0001t0001g0326 a0003c0006t0001g0197 a0001c0001t0001g0326 a0003c0006t0001g0197	2	450	0.0044	18	c.28 others(29): Show c.2810_*2811insCATGGTGAAACCCCATCT	CA6	ENSG00000131686.15	transcript	ENST00000377443.7	protein_coding		2423		chr1	TogoVar
CA6_chr1_8940868_8980092	8977700	A A	AAAGAAGA others(11): Show AAAGAAGAAAGAAAGAAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0006 a0006	a0006c0010 a0006c0010	a0006c0010t0001 a0006c0010t0001	a0006c0010t0001g0313 a0006c0010t0001g0313	1	107	0.0093	18	c.29 others(29): Show c.2996_*2997insAAGAAGAAAGAAAGAAAG	CA6	ENSG00000131686.15	transcript	ENST00000377443.7	protein_coding		2609		chr1	TogoVar
CA8_chr8_60180412_60286400	60190957	T T	TATATATA others(11): Show TATATATATATACACACAC	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02615.hp2 HG02280.hp2 HG02615.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0006 a0001c0003t0006	a0001c0003t0006g0145 a0001c0003t0006g0150 a0001c0003t0006g0145 a0001c0003t0006g0150	2	204	0.0098	18	c.36 others(33): Show c.36-973_*36-972insGTGTGTGTATATATATAT	CA8	ENSG00000178538.10	transcript	ENST00000317995.5	protein_coding	8/8			chr8	TogoVar
CA8_chr8_60180412_60286400	60219929	T T	TAAAAAAA others(11): Show TAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0006 a0001c0003t0006	a0001c0003t0006g0152 a0001c0003t0006g0152	1	144	0.0069	18	c.738 others(35): Show c.738+2702_738+2719dupTTTTTTTTTTTTTTTTTT	CA8	ENSG00000178538.10	transcript	ENST00000317995.5	protein_coding	7/8			chr8	TogoVar
CAB39L_chr13_49303650_49449064	49346100	G G	GATATATA others(11): Show GATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG02622.hp1 HG02809.hp2 others(4): Show HG00438.hp1 HG02622.hp1 HG02809.hp2 NA18939.hp2 NA18971.hp2 NA18999.hp1 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0001 a0001c0002t0002	a0001c0001t0001g0315 a0001c0002t0001g0129 a0001c0002t0001g0249 others(4): Show a0001c0001t0001g0315 a0001c0002t0001g0129 a0001c0002t0001g0249 a0001c0002t0001g0276 a0001c0002t0002g0069 a0001c0002t0002g0188 a0001c0002t0002g0275	7	169	0.0414	18	c.565 others(35): Show c.565-1880_565-1863dupATATATATATATATATAT	CAB39L	ENSG00000102547.19	transcript	ENST00000409308.6	protein_coding	7/10			chr13	TogoVar
CAB39L_chr13_49303650_49449064	49351262	T T	TTGTGTGT others(11): Show TTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03834.hp1 HG03834.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0019 a0001c0001t0003g0019	1	71	0.0141	18	c.396 others(33): Show c.396-368_396-351dupCACACACACACACACACA	CAB39L	ENSG00000102547.19	transcript	ENST00000409308.6	protein_coding	6/10			chr13	TogoVar
CAB39L_chr13_49303650_49449064	49441221	G G	GTATATAT others(11): Show GTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01257.hp1 HG02572.hp2 others(7): Show HG01106.hp1 HG01257.hp1 HG02572.hp2 HG02602.hp2 HG02809.hp1 HG02886.hp2 HG03139.hp1 HG03831.hp2 NA18906.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0006	a0001c0001t0001g0106 a0001c0001t0001g0261 a0001c0001t0001g0262 others(7): Show a0001c0001t0001g0106 a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0312 a0001c0001t0001g0316 a0001c0001t0002g0263 a0001c0001t0002g0289 a0001c0001t0002g0311 a0001c0002t0001g0313 a0001c0002t0006g0288	10	197	0.0508	18	c.-24 others(37): Show c.-246+2747_-246+2764dupTATATATATATATATATA	CAB39L	ENSG00000102547.19	transcript	ENST00000409308.6	protein_coding	1/10			chr13	TogoVar
CAB39L_chr13_49303650_49449064	49442815	A A	AAAAAAAA others(11): Show AAAAAAAAAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0052 a0001c0001t0002g0052	1	321	0.0031	18	c.-24 others(37): Show c.-246+1170_-246+1171insGTTTTTTTTTTTTTTTTT	CAB39L	ENSG00000102547.19	transcript	ENST00000409308.6	protein_coding	1/10			chr13	TogoVar
CAB39_chr2_230707842_230826075	230727363	C C	CGTGTGTG others(11): Show CGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02897.hp2 HG02895.hp2 HG02897.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0011 a0001c0001t0026g0012 a0001c0001t0026g0011 a0001c0001t0026g0012	2	96	0.0208	18	c.-44 others(37): Show c.-44+14152_-44+14169dupGTGTGTGTGTGTGTGTGT	CAB39	ENSG00000135932.12	transcript	ENST00000258418.10	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CAB39_chr2_230707842_230826075	230727398	G G	GTGTGTGT others(11): Show GTGTGTGTGTGTGTGTGTT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG02109.hp1 HG03516.hp2 HG00639.hp2 HG02109.hp1 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0060 a0001c0001t0019 a0001c0001t0060	a0001c0001t0019g0021 a0001c0001t0019g0023 a0001c0001t0060g0024 a0001c0001t0019g0021 a0001c0001t0019g0023 a0001c0001t0060g0024	3	336	0.0089	18	c.-44 others(37): Show c.-44+14169_-44+14170insGTGTGTGTGTGTGTGTTT	CAB39	ENSG00000135932.12	transcript	ENST00000258418.10	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CAB39_chr2_230707842_230826075	230748827	A A	AATATATA others(11): Show AATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18971.hp2 NA18971.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0141 a0001c0001t0007g0141	1	307	0.0033	18	c.-43 others(37): Show c.-43-11131_-43-11130insTATATATATATATATATA	CAB39	ENSG00000135932.12	transcript	ENST00000258418.10	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CAB39_chr2_230707842_230826075	230748829	A A	AATATATA others(11): Show AATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19085.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0148 a0001c0001t0022g0148	1	250	0.0040	18	c.-43 others(37): Show c.-43-11129_-43-11128insTATATATATATATATATA	CAB39	ENSG00000135932.12	transcript	ENST00000258418.10	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CAB39_chr2_230707842_230826075	230748831	A A	AAAAAAAA others(11): Show AAAAAAAATATATATATAT	intron_variant intron_variant	MODIFIER	NA19085.hp2 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0258 a0001c0001t0002g0258	1	149	0.0067	18	c.-43 others(37): Show c.-43-11127_-43-11126insAAAAAATATATATATATA	CAB39	ENSG00000135932.12	transcript	ENST00000258418.10	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CAB39_chr2_230707842_230826075	230748831	A A	AAAATATA others(11): Show AAAATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0276 a0001c0001t0001g0276	1	149	0.0067	18	c.-43 others(37): Show c.-43-11127_-43-11126insAATATATATATATATATA	CAB39	ENSG00000135932.12	transcript	ENST00000258418.10	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CAB39_chr2_230707842_230826075	230748831	A A	AATATATA others(11): Show AATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18975.hp2 NA18975.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0278 a0001c0001t0004g0278	1	149	0.0067	18	c.-43 others(37): Show c.-43-11108_-43-11091dupTATATATATATATATATA	CAB39	ENSG00000135932.12	transcript	ENST00000258418.10	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CAB39_chr2_230707842_230826075	230754374	C C	CCTTCCCC others(11): Show CCTTCCCCTTCCCCTCCTT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02257.hp1 HG02486.hp2 others(4): Show HG01884.hp2 HG02257.hp1 HG02486.hp2 HG02976.hp2 HG03139.hp2 NA18522.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0025 a0001c0001t0034 others(3): Show a0001c0001t0011 a0001c0001t0025 a0001c0001t0034 a0001c0001t0041 a0001c0001t0054 a0001c0001t0055	a0001c0001t0011g0309 a0001c0001t0025g0134 a0001c0001t0025g0135 others(4): Show a0001c0001t0011g0309 a0001c0001t0025g0134 a0001c0001t0025g0135 a0001c0001t0034g0305 a0001c0001t0041g0308 a0001c0001t0054g0137 a0001c0001t0055g0136	7	340	0.0206	18	c.-43 others(35): Show c.-43-5580_-43-5579insCCTTCCCCTCCTTCTTCC	CAB39	ENSG00000135932.12	transcript	ENST00000258418.10	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CAB39_chr2_230707842_230826075	230754380	T T	TCTTCCCC others(11): Show TCTTCCCCTCCTTCTTCCC	intron_variant intron_variant	MODIFIER	NA18975.hp1 NA18975.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0063 a0001c0001t0001g0063	1	190	0.0053	18	c.-43 others(35): Show c.-43-5557_-43-5540dupCCCCTCCTTCTTCCCCTT	CAB39	ENSG00000135932.12	transcript	ENST00000258418.10	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CAB39_chr2_230707842_230826075	230754420	T T	TCCCTCCT others(11): Show TCCCTCCTTCTTCCCCTTC	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG02572.hp2 HG02717.hp2 HG00735.hp1 HG02572.hp2 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0037 a0001c0001t0009 a0001c0001t0037	a0001c0001t0009g0017 a0001c0001t0009g0018 a0001c0001t0037g0019 a0001c0001t0009g0017 a0001c0001t0009g0018 a0001c0001t0037g0019	3	303	0.0099	18	c.-43 others(35): Show c.-43-5521_-43-5504dupCCCCTCCTTCTTCCCCTT	CAB39	ENSG00000135932.12	transcript	ENST00000258418.10	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CAB39_chr2_230707842_230826075	230773312	A A	ATGTGTGT others(11): Show ATGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG04204.hp1 NA18991.hp1 HG04204.hp1 NA18991.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0007 a0001c0001t0005 a0001c0001t0007	a0001c0001t0005g0131 a0001c0001t0007g0156 a0001c0001t0005g0131 a0001c0001t0007g0156	2	301	0.0066	18	c.114 others(37): Show c.114+13198_114+13199insGTGTGTGTGTGTGTGTGT	CAB39	ENSG00000135932.12	transcript	ENST00000258418.10	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CAB39_chr2_230707842_230826075	230773314	A A	ATATATAT others(11): Show ATATATATGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02818.hp2 NA19030.hp2 HG02818.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0042 a0001c0001t0001 a0001c0001t0042	a0001c0001t0001g0026 a0001c0001t0042g0027 a0001c0001t0001g0026 a0001c0001t0042g0027	2	80	0.0250	18	c.114 others(37): Show c.114+13200_114+13201insATATATGTGTGTGTGTGT	CAB39	ENSG00000135932.12	transcript	ENST00000258418.10	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CAB39_chr2_230707842_230826075	230782809	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02080.hp2 NA18962.hp1 NA18978.hp1 others(5): Show HG02080.hp2 NA18962.hp1 NA18978.hp1 NA18983.hp2 NA18994.hp1 NA19004.hp1 NA19009.hp1 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0016 a0001c0001t0003 a0001c0001t0016	a0001c0001t0003g0181 a0001c0001t0003g0182 a0001c0001t0003g0188 others(5): Show a0001c0001t0003g0181 a0001c0001t0003g0182 a0001c0001t0003g0188 a0001c0001t0003g0216 a0001c0001t0003g0229 a0001c0001t0003g0235 a0001c0001t0003g0236 a0001c0001t0016g0184	8	253	0.0316	18	c.115 others(35): Show c.115-8060_115-8059insTTTTTTTTTTTTTTTTTT	CAB39	ENSG00000135932.12	transcript	ENST00000258418.10	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CAB39_chr2_230707842_230826075	230825712	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0031 a0001c0001t0031	a0001c0001t0031g0197 a0001c0001t0031g0197	1	248	0.0040	18	c.70 others(29): Show c.7008_*7009insTTTTTTTTTTTTTTTTCT	CAB39	ENSG00000135932.12	transcript	ENST00000258418.10	protein_coding		4638		chr2	TogoVar
CABCOCO1_chr10_61657929_61771766	61669020	G G	GAAAAAAA others(11): Show GAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00642.hp2 HG01106.hp2 others(14): Show HG00423.hp2 HG00642.hp2 HG01106.hp2 HG01123.hp1 HG01175.hp1 HG01358.hp1 HG01943.hp1 HG02135.hp2 HG02258.hp2 HG02300.hp2 HG02615.hp2 HG02738.hp1 HG03927.hp1 HG04228.hp2 NA18949.hp2 NA18991.hp1 NA19089.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0001g0036 others(14): Show a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0297	17	177	0.0960	18	c.61- others(33): Show c.61-3599_61-3598insAAAAAAAAAAAAAAAAAA	CABCOCO1	ENSG00000183346.9	transcript	ENST00000648843.3	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr10	TogoVar
CABCOCO1_chr10_61657929_61771766	61677065	A A	AAATAATA others(11): Show AAATAATAATAATAATAAT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00639.hp2 HG01074.hp2 others(27): Show HG00140.hp2 HG00639.hp2 HG01074.hp2 HG01346.hp1 HG01361.hp1 HG01981.hp1 HG02027.hp1 HG02074.hp1 HG02080.hp2 HG02155.hp1 HG02523.hp2 HG02630.hp1 HG02647.hp1 HG03516.hp2 HG03927.hp2 HG04204.hp1 NA18522.hp1 NA18949.hp1 NA18950.hp2 NA18960.hp1 NA18969.hp1 NA18980.hp1 NA18984.hp2 NA18990.hp2 NA18997.hp1 NA19004.hp2 NA19063.hp2 NA19078.hp1 NA19080.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0003t0002 a0001c0001t0001 a0001c0001t0002 a0001c0003t0002	a0001c0001t0001g0013 a0001c0001t0001g0169 a0001c0001t0001g0341 others(25): Show a0001c0001t0001g0013 a0001c0001t0001g0169 a0001c0001t0001g0341 a0001c0001t0001g0345 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0209 a0001c0001t0002g0302 a0001c0001t0002g0303 a0001c0001t0002g0305 a0001c0001t0002g0319 a0001c0001t0002g0330 a0001c0001t0002g0331 a0001c0001t0002g0332 a0001c0001t0002g0335 a0001c0001t0002g0337 a0001c0001t0002g0338 a0001c0003t0002g0001 a0001c0003t0002g0301 a0001c0003t0002g0307 a0001c0003t0002g0313 a0001c0003t0002g0315 a0001c0003t0002g0324 a0001c0003t0002g0325 a0001c0003t0002g0326 a0001c0003t0002g0327 a0001c0003t0002g0328 a0001c0003t0002g0336	30	339	0.0885	18	c.165 others(35): Show c.165-4076_165-4075insTAATAATAATAATAATAA	CABCOCO1	ENSG00000183346.9	transcript	ENST00000648843.3	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr10	TogoVar

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