Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CCDC88B_chr11_64335204_64362534	64336085	C C	CATATATA others(11): Show CATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18941.hp1 NA18943.hp1 NA18966.hp1 NA18941.hp1 NA18943.hp1 NA18966.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0003 a0003c0003t0001g0159 a0003c0003t0001g0162 a0003c0003t0001g0003 a0003c0003t0001g0159 a0003c0003t0001g0162	3	354	0.0085	18	c.-41 others(29): Show c.-4182_-4181insATATATATATATATATAT	CCDC88B	ENSG00000168071.22	transcript	ENST00000356786.10	protein_coding		4118		chr11	TogoVar
CCDC88B_chr11_64335204_64362534	64336087	C C	CATATATA others(11): Show CATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0003 a0003	a0003c0019 a0003c0019	a0003c0019t0001 a0003c0019t0001	a0003c0019t0001g0169 a0003c0019t0001g0169	1	332	0.0030	18	c.-41 others(29): Show c.-4180_-4179insATATATATATATATATAT	CCDC88B	ENSG00000168071.22	transcript	ENST00000356786.10	protein_coding		4116		chr11	TogoVar
CCDC88B_chr11_64335204_64362534	64336089	C C	CATATATA others(11): Show CATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp1 NA19240.hp2 HG02630.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0018 a0001c0001t0001g0153 a0001c0001t0001g0018 a0001c0001t0001g0153	2	283	0.0071	18	c.-41 others(29): Show c.-4178_-4177insATATATATATATATATAT	CCDC88B	ENSG00000168071.22	transcript	ENST00000356786.10	protein_coding		4114		chr11	TogoVar
CCDC88B_chr11_64335204_64362534	64336091	C C	CATATATA others(11): Show CATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02071.hp2 HG02071.hp2	a0022 a0022	a0022c0036 a0022c0036	a0022c0036t0011 a0022c0036t0011	a0022c0036t0011g0041 a0022c0036t0011g0041	1	231	0.0043	18	c.-41 others(29): Show c.-4176_-4175insATATATATATATATATAT	CCDC88B	ENSG00000168071.22	transcript	ENST00000356786.10	protein_coding		4112		chr11	TogoVar
CCDC88C_chr14_91266323_91422820	91271109	G G	GCAGGGGG others(11): Show GCAGGGGGGTGGAGGGGCA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp2 HG00280.hp2 HG00408.hp2 others(55): Show HG00140.hp2 HG00280.hp2 HG00408.hp2 HG00544.hp2 HG00735.hp2 HG00738.hp1 HG01106.hp1 HG01168.hp2 HG01169.hp1 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01361.hp1 HG01433.hp2 HG01884.hp2 HG01934.hp1 HG01934.hp2 HG02004.hp1 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02083.hp1 HG02273.hp2 HG02602.hp1 HG02698.hp2 HG02738.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03017.hp2 HG03239.hp1 HG03490.hp2 HG03492.hp2 HG03540.hp2 HG03669.hp2 HG03831.hp1 HG03927.hp1 HG04115.hp2 HG04184.hp1 HG04228.hp1 NA18747.hp2 NA18942.hp2 NA18957.hp1 NA18963.hp1 NA18981.hp1 NA18999.hp2 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp1 NA19060.hp2 NA19076.hp2 NA19083.hp2 NA19084.hp2 NA19091.hp2 NA20905.hp1	a0001 a0002 a0005 others(4): Show a0001 a0002 a0005 a0006 a0015 a0025 a0027	a0001c0001 a0001c0004 a0001c0011 others(14): Show a0001c0001 a0001c0004 a0001c0011 a0001c0020 a0001c0049 a0001c0055 a0002c0002 a0002c0005 a0002c0016 a0002c0030 a0002c0061 a0002c0062 a0005c0039 a0006c0072 a0015c0029 a0025c0047 a0027c0056	a0001c0001t0001 a0001c0004t0001 a0001c0004t0003 others(19): Show a0001c0001t0001 a0001c0004t0001 a0001c0004t0003 a0001c0011t0001 a0001c0011t0004 a0001c0020t0001 a0001c0049t0001 a0001c0055t0001 a0002c0002t0001 a0002c0002t0004 a0002c0002t0019 a0002c0005t0001 a0002c0016t0001 a0002c0016t0004 a0002c0030t0001 a0002c0061t0001 a0002c0062t0001 a0005c0039t0001 a0006c0072t0001 a0015c0029t0001 a0025c0047t0004 a0027c0056t0004	a0001c0001t0001g0090 a0001c0001t0001g0093 a0001c0001t0001g0095 others(55): Show a0001c0001t0001g0090 a0001c0001t0001g0093 a0001c0001t0001g0095 a0001c0001t0001g0136 a0001c0001t0001g0175 a0001c0001t0001g0190 a0001c0001t0001g0219 a0001c0004t0001g0009 a0001c0004t0001g0026 a0001c0004t0001g0081 a0001c0004t0001g0082 a0001c0004t0001g0113 a0001c0004t0001g0143 a0001c0004t0001g0223 a0001c0004t0001g0234 a0001c0004t0001g0235 a0001c0004t0003g0280 a0001c0011t0001g0212 a0001c0011t0004g0200 a0001c0020t0001g0211 a0001c0049t0001g0257 a0001c0055t0001g0248 a0002c0002t0001g0015 a0002c0002t0001g0047 a0002c0002t0001g0063 a0002c0002t0001g0069 a0002c0002t0001g0087 a0002c0002t0001g0094 a0002c0002t0001g0124 a0002c0002t0001g0146 a0002c0002t0001g0149 a0002c0002t0001g0155 a0002c0002t0001g0226 a0002c0002t0001g0251 a0002c0002t0004g0008 a0002c0002t0019g0157 a0002c0005t0001g0016 a0002c0005t0001g0052 a0002c0005t0001g0139 a0002c0005t0001g0142 a0002c0005t0001g0144 a0002c0005t0001g0154 a0002c0005t0001g0170 a0002c0005t0001g0173 a0002c0005t0001g0174 a0002c0016t0001g0214 a0002c0016t0001g0217 a0002c0016t0001g0218 a0002c0016t0004g0207 a0002c0030t0001g0194 a0002c0061t0001g0010 a0002c0062t0001g0266 a0005c0039t0001g0032 a0006c0072t0001g0196 a0015c0029t0001g0198 a0015c0029t0001g0199 a0025c0047t0004g0172 a0027c0056t0004g0089	58	132	0.4394	18	c.15 others(29): Show c.1515_*1516insTGCCCCTCCACCCCCCTG	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding		213		chr14	TogoVar
CCDC88C_chr14_91266323_91422820	91334653	A A	AAAACCTG others(11): Show AAAACCTGGATTTTCATAT	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG02735.hp1 HG00642.hp2 HG02735.hp1	a0001 a0003 a0001 a0003	a0001c0050 a0003c0015 a0001c0050 a0003c0015	a0001c0050t0001 a0003c0015t0002 a0001c0050t0001 a0003c0015t0002	a0001c0050t0001g0220 a0003c0015t0002g0193 a0001c0050t0001g0220 a0003c0015t0002g0193	2	282	0.0071	18	c.105 others(37): Show c.1050+3334_1050+3351dupATATGAAAATCCAGGTTT	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	10/29			chr14	TogoVar
CCDC88C_chr14_91266323_91422820	91392747	A A	ACGCCCCT others(11): Show ACGCCCCTCACTCTCACCG	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG02717.hp2 HG03209.hp1 others(2): Show HG01515.hp1 HG02717.hp2 HG03209.hp1 HG03225.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0011 a0001c0063 a0001c0001 a0001c0011 a0001c0063	a0001c0001t0009 a0001c0011t0001 a0001c0063t0020 a0001c0001t0009 a0001c0011t0001 a0001c0063t0020	a0001c0001t0009g0268 a0001c0001t0009g0269 a0001c0001t0009g0270 others(2): Show a0001c0001t0009g0268 a0001c0001t0009g0269 a0001c0001t0009g0270 a0001c0011t0001g0208 a0001c0063t0020g0267	5	187	0.0267	18	c.270 others(37): Show c.270+15894_270+15911dupCGGTGAGAGTGAGGGGCG	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	3/29			chr14	TogoVar
CCDC88C_chr14_91266323_91422820	91392764	C C	CGCGCCCC others(11): Show CGCGCCCCTCACTCTCACT	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0038 a0001c0038	a0001c0038t0008 a0001c0038t0008	a0001c0038t0008g0254 a0001c0038t0008g0254	1	192	0.0052	18	c.270 others(37): Show c.270+15877_270+15894dupAGTGAGAGTGAGGGGCGC	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	3/29			chr14	TogoVar
CCDC88C_chr14_91266323_91422820	91392767	G G	GCCCCTCA others(11): Show GCCCCTCACTCTCACTGCA	intron_variant intron_variant	MODIFIER	NA19068.hp1 NA19068.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0121 a0003c0003t0002g0121	1	282	0.0035	18	c.270 others(37): Show c.270+15874_270+15891dupTGCAGTGAGAGTGAGGGG	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	3/29			chr14	TogoVar
CCDC88C_chr14_91266323_91422820	91417744	C C	CGCGCCGC others(11): Show CGCGCCGCGGCACAAAACG	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01515.hp2 HG01515.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0005 a0001c0001t0013g0005	1	279	0.0036	18	c.-72 others(25): Show c.-72_-55dupCGTTTTGTGCCGCGGCGC	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	1/30	55		chr14	TogoVar
CCDC91_chr12_28185456_28555166	28237235	T T	TACACACA others(11): Show TACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG02071.hp1 NA18968.hp1 others(1): Show HG00140.hp2 HG02071.hp1 NA18968.hp1 NA19090.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0036 a0002c0002t0001g0041 a0002c0002t0001g0042 others(1): Show a0002c0002t0001g0036 a0002c0002t0001g0041 a0002c0002t0001g0042 a0002c0002t0001g0068	4	6	0.6667	18	c.-14 others(37): Show c.-14-19953_-14-19936dupCACACACACACACACACA	CCDC91	ENSG00000123106.11	transcript	ENST00000536442.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC91_chr12_28185456_28555166	28264575	A A	ATGTCTGT others(11): Show ATGTCTGTCTGTATGTGTG	intron_variant intron_variant	MODIFIER	NA19062.hp2 NA19062.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0218 a0003c0003t0001g0218	1	212	0.0047	18	c.109 others(35): Show c.109+5134_109+5135insGTCTGTCTGTATGTGTGT	CCDC91	ENSG00000123106.11	transcript	ENST00000536442.6	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC91_chr12_28185456_28555166	28362278	C C	CTATATAT others(11): Show CTATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA19084.hp1 NA19084.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0224 a0003c0003t0001g0224	1	236	0.0042	18	c.577 others(33): Show c.577-159_577-158insATATATATATATATATAT	CCDC91	ENSG00000123106.11	transcript	ENST00000536442.6	protein_coding	6/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC91_chr12_28185456_28555166	28394711	G G	GCTCTCTC others(11): Show GCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0005 a0003c0003t0005	a0003c0003t0005g0229 a0003c0003t0005g0229	1	205	0.0049	18	c.762 others(35): Show c.762+3304_762+3321dupTCTCTCTCTCTCTCTCTC	CCDC91	ENSG00000123106.11	transcript	ENST00000536442.6	protein_coding	8/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC91_chr12_28185456_28555166	28447800	G G	GGGGAGGG others(11): Show GGGGAGGGGAGGGAGGGGA	intron_variant intron_variant	MODIFIER	NA18959.hp1 NA18959.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0127 a0001c0001t0001g0127	1	240	0.0042	18	c.763 others(35): Show c.763-2360_763-2343dupGGGAGGGGAGGGAGGGGA	CCDC91	ENSG00000123106.11	transcript	ENST00000536442.6	protein_coding	8/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC92B_chr17_2715801_2754652	2730521	T T	TTGTGTGT others(11): Show TTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01070.hp1 HG01071.hp1 others(5): Show HG00735.hp2 HG01070.hp1 HG01071.hp1 HG01123.hp1 HG03831.hp2 NA18612.hp1 NA18969.hp1 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0003 a0001c0001t0071 a0002c0002t0001 others(1): Show a0001c0001t0003 a0001c0001t0071 a0002c0002t0001 a0002c0002t0011	a0001c0001t0003g0083 a0001c0001t0071g0378 a0002c0002t0001g0114 others(5): Show a0001c0001t0003g0083 a0001c0001t0071g0378 a0002c0002t0001g0114 a0002c0002t0001g0184 a0002c0002t0001g0199 a0002c0002t0001g0286 a0002c0002t0001g0380 a0002c0002t0011g0310	8	136	0.0588	18	c.131 others(31): Show c.131-46_131-29dupCACACACACACACACACA	CCDC92B	ENSG00000277200.2	transcript	ENST00000614400.2	protein_coding	2/3			chr17	TogoVar
CCDC92B_chr17_2715801_2754652	2733484	C C	CCCGACCT others(11): Show CCCGACCTCAGGTGATCCG	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02145.hp1 HG02559.hp2 others(5): Show HG01109.hp2 HG02145.hp1 HG02559.hp2 HG02572.hp1 HG02897.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0008 a0001c0001t0016 others(4): Show a0001c0001t0004 a0001c0001t0008 a0001c0001t0016 a0001c0001t0026 a0001c0001t0038 a0001c0001t0063 a0001c0001t0065	a0001c0001t0004g0091 a0001c0001t0004g0092 a0001c0001t0008g0094 others(5): Show a0001c0001t0004g0091 a0001c0001t0004g0092 a0001c0001t0008g0094 a0001c0001t0016g0093 a0001c0001t0026g0095 a0001c0001t0038g0035 a0001c0001t0063g0215 a0001c0001t0065g0214	8	416	0.0192	18	c.130 others(35): Show c.130+1514_130+1531dupCGGATCACCTGAGGTCGG	CCDC92B	ENSG00000277200.2	transcript	ENST00000614400.2	protein_coding	2/3			chr17	TogoVar
CCDC9_chr19_47251525_47276953	47254421	T T	TTATATAT others(11): Show TTATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18990.hp1 NA18990.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0039 a0002c0001t0039	a0002c0001t0039g0047 a0002c0001t0039g0047	1	257	0.0039	18	c.-22 others(29): Show c.-2260_-2259insTATATATATATATATATA	CCDC9	ENSG00000105321.14	transcript	ENST00000221922.11	protein_coding		2103		chr19	TogoVar
CCDC9_chr19_47251525_47276953	47271688	C C	CGTGTGTG others(11): Show CGTGTGTGTGTGTGTGTGT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18990.hp1 NA18990.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0039 a0002c0001t0039	a0002c0001t0039g0047 a0002c0001t0039g0047	1	398	0.0025	18	c.10 others(25): Show c.10_*11insGTGTGTGTGTGTGTGTGT	CCDC9	ENSG00000105321.14	transcript	ENST00000221922.11	protein_coding	12/12	11		chr19	TogoVar
CCDC9_chr19_47251525_47276953	47271689	C C	CTGTGTGT others(11): Show CTGTGTGTGTGTGTGTGTG	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01109.hp2 HG01255.hp1 NA18968.hp2 others(2): Show HG01109.hp2 HG01255.hp1 NA18968.hp2 NA18974.hp1 NA19065.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0012 a0002c0001t0035 a0002c0001t0012 a0002c0001t0035	a0002c0001t0012g0001 a0002c0001t0012g0222 a0002c0001t0035g0165 a0002c0001t0012g0001 a0002c0001t0012g0222 a0002c0001t0035g0165	5	340	0.0147	18	c.38 others(25): Show c.38_*55dupTGTGTGTGTGTGTGTGTG	CCDC9	ENSG00000105321.14	transcript	ENST00000221922.11	protein_coding	12/12	56	INFO_REALIGN_3_PRIME	chr19	TogoVar
CCDC9_chr19_47251525_47276953	47271732	T T	TGTGTGTG others(11): Show TGTGTGTGTGTGTGTGTGC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18952.hp1 NA18970.hp1 NA18952.hp1 NA18970.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0005 a0002c0001t0001g0040 a0002c0001t0001g0005 a0002c0001t0001g0040	2	314	0.0064	18	c.55 others(25): Show c.55_*56insTGTGTGTGTGTGTGTGCG	CCDC9	ENSG00000105321.14	transcript	ENST00000221922.11	protein_coding	12/12	56	INFO_REALIGN_3_PRIME	chr19	TogoVar
CCKBR_chr11_6254838_6277127	6259543	C C	CTCTCTCT others(11): Show CTCTCTCTCTCTCTCTCTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02071.hp2 HG02818.hp1 NA19043.hp2 HG02071.hp2 HG02818.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0010 a0001c0001t0012 a0001c0001t0002 a0001c0001t0010 a0001c0001t0012	a0001c0001t0002g0143 a0001c0001t0010g0190 a0001c0001t0012g0035 a0001c0001t0002g0143 a0001c0001t0010g0190 a0001c0001t0012g0035	3	77	0.0390	18	c.-38 others(27): Show c.-386_-385insTCTCTCTCTCTCTCTCTT	CCKBR	ENSG00000110148.10	transcript	ENST00000334619.7	protein_coding		294		chr11	TogoVar
CCKBR_chr11_6254838_6277127	6261454	A A	AAAAAAAA others(11): Show AAAAAAAAAAAAAATATAT	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0015 a0002c0002t0015	a0002c0002t0015g0254 a0002c0002t0015g0254	1	98	0.0102	18	c.151 others(35): Show c.151+1376_151+1377insAAAAAAAAAAAATATATA	CCKBR	ENSG00000110148.10	transcript	ENST00000334619.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr11	TogoVar
CCKBR_chr11_6254838_6277127	6261454	A A	AAAAAAAA others(11): Show AAAAAAAAAATATATATAT	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01433.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0069 a0002c0002t0001g0069	1	98	0.0102	18	c.151 others(35): Show c.151+1376_151+1377insAAAAAAAATATATATATA	CCKBR	ENSG00000110148.10	transcript	ENST00000334619.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr11	TogoVar
CCKBR_chr11_6254838_6277127	6261462	T T	TATATATA others(11): Show TATATATACACACACACAC	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0214 a0001c0001t0003g0214	1	101	0.0099	18	c.151 others(35): Show c.151+1384_151+1385insTATATACACACACACACA	CCKBR	ENSG00000110148.10	transcript	ENST00000334619.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr11	TogoVar
CCKBR_chr11_6254838_6277127	6261462	T T	TATATATA others(11): Show TATATATATATACACACAC	intron_variant intron_variant	MODIFIER	HG03927.hp2 NA19075.hp2 HG03927.hp2 NA19075.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0194 a0001c0001t0005g0195 a0001c0001t0002g0194 a0001c0001t0005g0195	2	102	0.0196	18	c.151 others(35): Show c.151+1384_151+1385insTATATATATACACACACA	CCKBR	ENSG00000110148.10	transcript	ENST00000334619.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr11	TogoVar
CCKBR_chr11_6254838_6277127	6261462	T T	TATATATA others(11): Show TATATATATATATACACAC	intron_variant intron_variant	MODIFIER	NA18973.hp2 NA19011.hp1 NA18973.hp2 NA19011.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0050 a0001c0001t0002g0050	2	102	0.0196	18	c.151 others(35): Show c.151+1384_151+1385insTATATATATATACACACA	CCKBR	ENSG00000110148.10	transcript	ENST00000334619.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr11	TogoVar
CCKBR_chr11_6254838_6277127	6262722	G G	GAGAGAGA others(11): Show GAGAGAGAGAGAGAGAGAA	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG02647.hp2 HG02723.hp1 others(1): Show HG01516.hp1 HG02647.hp2 HG02723.hp1 HG02896.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0010 a0001c0001t0014 a0001c0001t0001 a0001c0001t0010 a0001c0001t0014	a0001c0001t0001g0216 a0001c0001t0010g0094 a0001c0001t0014g0021 others(1): Show a0001c0001t0001g0216 a0001c0001t0010g0094 a0001c0001t0014g0021 a0001c0001t0014g0215	4	169	0.0237	18	c.151 others(35): Show c.151+2646_151+2647insGAGAGAGAGAGAGAAAGA	CCKBR	ENSG00000110148.10	transcript	ENST00000334619.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr11	TogoVar
CCL15_chr17_35992582_36006553	36003667	A A	AAAAAAAA others(11): Show AAAAAAAAAAAAAAAAAGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0003 a0002c0002t0001g0003	1	403	0.0025	18	c.-21 others(29): Show c.-2176_-2175insGCTTTTTTTTTTTTTTTT	CCL15	ENSG00000275718.2	transcript	ENST00000617897.2	protein_coding		2115		chr17	TogoVar
CCL16_chr17_35971499_35986497	35974417	T T	TATATATA others(11): Show TATATATATATATACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00438.hp1 NA18997.hp1 NA18999.hp2 others(1): Show HG00438.hp1 NA18997.hp1 NA18999.hp2 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	4	362	0.0110	18	c.31 others(29): Show c.3148_*3149insGTGTGTATATATATATAT	CCL16	ENSG00000275152.5	transcript	ENST00000611905.2	protein_coding		2081		chr17	TogoVar
CCL16_chr17_35971499_35986497	35974417	T T	TATATATA others(11): Show TATATATATATATATACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00438.hp2 HG00609.hp2 HG02040.hp2 others(28): Show HG00438.hp2 HG00609.hp2 HG02040.hp2 HG02074.hp1 HG02080.hp1 HG02129.hp2 HG03209.hp2 HG03453.hp1 HG03654.hp2 HG03704.hp1 HG03834.hp1 NA18940.hp1 NA18949.hp2 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18960.hp1 NA18963.hp1 NA18971.hp1 NA18978.hp1 NA18985.hp2 NA18989.hp2 NA19012.hp1 NA19055.hp2 NA19059.hp1 NA19060.hp1 NA19063.hp1 NA19080.hp1 NA19084.hp2 NA19088.hp1 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0005 a0002c0002t0001 a0001c0001t0001 a0001c0001t0005 a0002c0002t0001	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0005g0009 others(1): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0005g0009 a0002c0002t0001g0005	31	389	0.0797	18	c.31 others(29): Show c.3148_*3149insGTGTATATATATATATAT	CCL16	ENSG00000275152.5	transcript	ENST00000611905.2	protein_coding		2081		chr17	TogoVar
CCL16_chr17_35971499_35986497	35974417	T T	TATATATA others(11): Show TATATATATATATATATAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	359	0.0028	18	c.31 others(29): Show c.3148_*3149insGTATATATATATATATAT	CCL16	ENSG00000275152.5	transcript	ENST00000611905.2	protein_coding		2081		chr17	TogoVar
CCL16_chr17_35971499_35986497	35974455	C C	CACCTATA others(11): Show CACCTATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01975.hp2 HG02056.hp2 HG03942.hp2 others(3): Show HG01975.hp2 HG02056.hp2 HG03942.hp2 NA18968.hp1 NA18995.hp1 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0004 a0001c0001t0003g0004	6	428	0.0140	18	c.31 others(29): Show c.3110_*3111insATATATATATATATAGGT	CCL16	ENSG00000275152.5	transcript	ENST00000611905.2	protein_coding		2043		chr17	TogoVar
CCL18_chr17_36059272_36077032	36076399	T T	TTTCCCTC others(11): Show TTTCCCTCGGAGTAGATGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0018 a0001c0001t0001g0018	1	454	0.0022	18	c.53 others(29): Show c.5358_*5359insTTCCCTCGGAGTAGATGG	CCL18	ENSG00000275385.2	transcript	ENST00000616054.2	protein_coding		4368		chr17	TogoVar
CCL19_chr9_34684570_34696276	34690424	C C	CTGTGTGT others(11): Show CTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02735.hp1 HG00738.hp2 HG02735.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0028 a0001c0001t0001g0028	2	34	0.0588	18	c.50- others(30): Show c.50-100_50-83dupCACACACACACACACACA	CCL19	ENSG00000172724.12	transcript	ENST00000311925.7	protein_coding	1/3			chr9	TogoVar
CCL26_chr7_75764538_75777211	75767241	G G	GGCAGGAT others(11): Show GGCAGGATAATGGAGCTGA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18951.hp1 NA18951.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	422	0.0024	18	c.24 others(29): Show c.2451_*2452insTCAGCTCCATTATCCTGC	CCL26	ENSG00000006606.9	transcript	ENST00000005180.9	protein_coding		2296		chr7	TogoVar
CCL26_chr7_75764538_75777211	75768802	T T	TTTATTAT others(11): Show TTTATTATTATTATTATTA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0010 a0001c0001t0001g0010	1	415	0.0024	18	c.89 others(27): Show c.890_*891insTAATAATAATAATAATAA	CCL26	ENSG00000006606.9	transcript	ENST00000005180.9	protein_coding		735		chr7	TogoVar
CCL3L3_chr17_36189869_36201758	36192941	T T	TGTGTGTG others(11): Show TGTGTGTGTGTGTGTGTGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0002 a0001c0002t0002g0002	1	33	0.0303	18	c.23 others(29): Show c.2344_*2345insTCACACACACACACACAC	CCL3L3	ENSG00000276085.1	transcript	ENST00000619989.1	protein_coding		1927		chr17	TogoVar
CCL4L2_chr17_36206063_36217873	36208207	T T	TTATATAT others(11): Show TTATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03486.hp2 NA18992.hp1 NA19011.hp1 HG03486.hp2 NA18992.hp1 NA19011.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0007 a0001c0001 a0001c0004 a0001c0007	a0001c0001t0001 a0001c0004t0001 a0001c0007t0001 a0001c0001t0001 a0001c0004t0001 a0001c0007t0001	a0001c0001t0001g0015 a0001c0004t0001g0005 a0001c0007t0001g0009 a0001c0001t0001g0015 a0001c0004t0001g0005 a0001c0007t0001g0009	3	57	0.0526	18	c.-29 others(29): Show c.-2935_-2934insTATATATATATATATATA	CCL4L2	ENSG00000276070.5	transcript	ENST00000617405.5	protein_coding		2855		chr17	TogoVar
CCL4_chr17_36098827_36110614	36101028	G G	GACATATA others(11): Show GACATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18978.hp2 NA18994.hp2 NA18978.hp2 NA18994.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	141	0.0142	18	c.-28 others(29): Show c.-2878_-2877insACATATATATATATATAT	CCL4	ENSG00000275302.2	transcript	ENST00000615863.2	protein_coding		2798		chr17	TogoVar
CCL5_chr17_35866491_35885360	35881674	A A	ATATTATT others(11): Show ATATTATTATTATTATTAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0037 a0001c0003t0001g0037	1	373	0.0027	18	c.-13 others(29): Show c.-1370_-1369insATAATAATAATAATAATA	CCL5	ENSG00000271503.7	transcript	ENST00000605140.6	protein_coding		1315		chr17	TogoVar
CCL7_chr17_34265221_34277242	34274840	A A	AAGAAGGA others(11): Show AAGAAGGAGAAGGAGAAGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00544.hp2 HG02970.hp2 HG03453.hp2 others(2): Show HG00544.hp2 HG02970.hp2 HG03453.hp2 HG03516.hp2 NA18954.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0003g0001 a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0003g0001	5	296	0.0169	18	c.30 others(29): Show c.3038_*3039insAGAAGGAGAAGGAGAAGG	CCL7	ENSG00000108688.11	transcript	ENST00000378569.2	protein_coding		2599		chr17	TogoVar
CCM2_chr7_44995201_45081453	45042265	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02897.hp1 HG02970.hp2 others(1): Show HG02896.hp1 HG02897.hp1 HG02970.hp2 HG03130.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0001 a0001c0008t0001	a0001c0008t0001g0007 a0001c0008t0001g0009 a0001c0008t0001g0010 others(1): Show a0001c0008t0001g0007 a0001c0008t0001g0009 a0001c0008t0001g0010 a0001c0008t0001g0011	4	45	0.0889	18	c.204 others(35): Show c.204+3849_204+3850insAAAAAAAAAAAAAAAAAA	CCM2	ENSG00000136280.17	transcript	ENST00000258781.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr7	TogoVar
CCM2_chr7_44995201_45081453	45078769	C C	CATCAGAA others(11): Show CATCAGAAGGTGGTGAGAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19064.hp2 NA19064.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0002 a0002c0005t0002	a0002c0005t0002g0042 a0002c0005t0002g0042	1	314	0.0032	18	c.27 others(29): Show c.2712_*2713insATCAGAAGGTGGTGAGAT	CCM2	ENSG00000136280.17	transcript	ENST00000258781.11	protein_coding		2317		chr7	TogoVar
CCN1_chr1_85575761_85588950	85580544	G G	GACACACA others(11): Show GACACACACACACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18995.hp1 NA18995.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0001 a0001c0003t0002g0001	1	381	0.0026	18	c.-44 others(27): Show c.-441_-440insACACACACACACACACAC	CCN1	ENSG00000142871.18	transcript	ENST00000451137.7	protein_coding		216		chr1	TogoVar
CCN1_chr1_85575761_85588950	85580899	C C	CCCGCTGC others(11): Show CCCGCTGCGCACGGCCTGT	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0001 a0001c0001t0009g0001	1	464	0.0022	18	c.-78 others(25): Show c.-78_-61dupGCACGGCCTGTCCGCTGC	CCN1	ENSG00000142871.18	transcript	ENST00000451137.7	protein_coding	1/5	60	INFO_REALIGN_3_PRIME	chr1	TogoVar
CCN4_chr8_133186039_133236690	133190559	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0044 a0001c0001t0020g0044	1	98	0.0102	18	c.-58 others(27): Show c.-586_-585insAAAAAAAAAAAAAAAAAA	CCN4	ENSG00000104415.14	transcript	ENST00000250160.11	protein_coding		479		chr8	TogoVar
CCN4_chr8_133186039_133236690	133217936	C C	CCACACAC others(11): Show CCACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00642.hp2 HG01070.hp1 others(26): Show HG00140.hp2 HG00642.hp2 HG01070.hp1 HG01109.hp2 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG02004.hp2 HG02129.hp2 HG02155.hp1 HG02486.hp2 HG02572.hp1 HG02622.hp1 HG02647.hp2 HG02723.hp2 HG02809.hp2 HG02896.hp1 HG03017.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03540.hp1 NA18961.hp2 NA18964.hp1 NA18966.hp2 NA18985.hp2 NA19063.hp2 NA19085.hp1 NA20752.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0002c0004 others(3): Show a0001c0001 a0001c0002 a0002c0004 a0003c0006 a0003c0007 a0004c0008	a0001c0001t0001 a0001c0001t0002 a0001c0002t0004 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0004 a0001c0002t0010 a0001c0002t0011 a0001c0002t0028 a0002c0004t0004 a0003c0006t0001 a0003c0007t0017 a0004c0008t0029 a0004c0008t0037	a0001c0001t0001g0027 a0001c0001t0001g0095 a0001c0001t0001g0105 others(26): Show a0001c0001t0001g0027 a0001c0001t0001g0095 a0001c0001t0001g0105 a0001c0001t0001g0155 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0276 a0001c0001t0001g0330 a0001c0001t0001g0349 a0001c0001t0001g0350 a0001c0001t0001g0370 a0001c0001t0002g0026 a0001c0002t0004g0103 a0001c0002t0010g0266 a0001c0002t0011g0236 a0001c0002t0011g0262 a0001c0002t0011g0263 a0001c0002t0028g0235 a0002c0004t0004g0081 a0002c0004t0004g0222 a0003c0006t0001g0031 a0003c0006t0001g0047 a0003c0006t0001g0067 a0003c0006t0001g0071 a0003c0006t0001g0213 a0003c0007t0017g0124 a0003c0007t0017g0241 a0004c0008t0029g0108 a0004c0008t0037g0107	29	93	0.3118	18	c.350 others(35): Show c.350-2637_350-2620dupACACACACACACACACAC	CCN4	ENSG00000104415.14	transcript	ENST00000250160.11	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr8	TogoVar
CCN6_chr6_112049104_112074686	112065614	A A	ACACACAC others(11): Show ACACACACAAACACACACG	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0061 a0001c0001t0001g0061	1	428	0.0023	18	c.589 others(33): Show c.589+624_589+625insAAACACACACGCACACAC	CCN6	ENSG00000112761.22	transcript	ENST00000368666.7	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr6	TogoVar
CCNB1_chr5_69162150_69183245	69164026	A A	AAAAAATA others(11): Show AAAAAATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01167.hp2 HG01167.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0145 a0001c0001t0001g0145	1	139	0.0072	18	c.-32 others(29): Show c.-3237_-3236insAAAAATATATATATATAT	CCNB1	ENSG00000134057.15	transcript	ENST00000256442.10	protein_coding		3123		chr5	TogoVar

Search by Variant

Search

Search Results