view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CHRM3_chr1_239381568_239920450 | 239383054 | G | GTCTCTCT others(11): Show |
upstream_gene_variant | MODIFIER | HG01433.hp2 HG01981.hp1 HG02723.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0012others(2): Show | a0001c0001t0001g0083 a0001c0001t0002g0014 a0001c0001t0012g0028 others(2): Show |
5 | 53 | 0.0943 | 18 | c.-46 others(29): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 3513 | chr1 | TogoVar | |||||||
CHRM3_chr1_239381568_239920450 | 239403976 | G | GGAGAGAG others(11): Show |
intron_variant | MODIFIER | HG01256.hp2 HG01258.hp1 HG03130.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0010others(1): Show | a0001c0001t0002g0037 a0001c0001t0002g0051 a0001c0001t0003g0115 others(2): Show |
5 | 23 | 0.2174 | 18 | c.-52 others(39): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239580689 | T | TTATATAT others(11): Show |
intron_variant | MODIFIER | HG00609.hp2 HG00738.hp2 HG01256.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(2): Show | a0001c0001t0001g0005 a0001c0001t0001g0106 a0001c0001t0002g0037 others(4): Show |
7 | 59 | 0.1186 | 18 | c.-31 others(39): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239602090 | A | ATATGTGT others(11): Show |
intron_variant | MODIFIER | HG02040.hp1 HG02109.hp1 HG02723.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0022a0001c0001t0039others(3): Show | a0001c0001t0003g0039 a0001c0001t0022g0009 a0001c0001t0039g0112 others(3): Show |
6 | 41 | 0.1463 | 18 | c.-31 others(39): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239602110 | G | GTGTGTGT others(11): Show |
intron_variant | MODIFIER | HG01243.hp2 HG03209.hp1 |
a0001 | a0001c0001 | a0001c0001t0019a0001c0001t0055 | a0001c0001t0019g0025 a0001c0001t0055g0079 |
2 | 83 | 0.0241 | 18 | c.-31 others(39): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239602110 | G | GTGTGTGT others(11): Show |
intron_variant | MODIFIER | HG01515.hp2 HG02258.hp2 |
a0001 | a0001c0001a0001c0005 | a0001c0001t0007a0001c0005t0047 | a0001c0001t0007g0055 a0001c0005t0047g0081 |
2 | 83 | 0.0241 | 18 | c.-31 others(39): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239662890 | C | CTCTTCTT others(11): Show |
intron_variant | MODIFIER | HG03209.hp1 | a0001 | a0001c0001 | a0001c0001t0019 | a0001c0001t0019g0025 | 1 | 110 | 0.0091 | 18 | c.-24 others(39): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239662893 | C | CTCTTCTT others(11): Show |
intron_variant | MODIFIER | HG02109.hp2 HG02451.hp1 HG02970.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0029a0001c0001t0033others(1): Show | a0001c0001t0005g0041 a0001c0001t0005g0077 a0001c0001t0029g0089 others(2): Show |
5 | 11 | 0.4545 | 18 | c.-24 others(39): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239766672 | T | TATATAGA others(11): Show |
intron_variant | MODIFIER | HG02615.hp1 NA19000.hp1 NA19068.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0013 | a0001c0001t0001g0054 a0001c0001t0004g0016 a0001c0001t0013g0085 |
3 | 38 | 0.0789 | 18 | c.-14 others(39): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239793803 | A | ATTTTTTT others(11): Show |
intron_variant | MODIFIER | HG03195.hp1 HG03209.hp1 |
a0001 | a0001c0001 | a0001c0001t0018a0001c0001t0019 | a0001c0001t0018g0022 a0001c0001t0019g0025 |
2 | 17 | 0.1176 | 18 | c.-14 others(39): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239813916 | C | CAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG02970.hp2 HG03098.hp1 |
a0001 | a0001c0001 | a0001c0001t0019a0001c0001t0042 | a0001c0001t0019g0040 a0001c0001t0042g0080 |
2 | 19 | 0.1053 | 18 | c.-14 others(39): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239874285 | G | GTATATAT others(11): Show |
intron_variant | MODIFIER | HG03130.hp2 | a0001 | a0001c0001 | a0001c0001t0054 | a0001c0001t0054g0113 | 1 | 53 | 0.0189 | 18 | c.-19 others(37): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239874326 | T | TATATATA others(11): Show |
intron_variant | MODIFIER | HG03540.hp1 | a0001 | a0001c0001 | a0001c0001t0029 | a0001c0001t0029g0089 | 1 | 111 | 0.0090 | 18 | c.-19 others(37): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM5_chr15_33963497_34072458 | 33983140 | G | GTGTGTGT others(11): Show |
intron_variant | MODIFIER | HG01070.hp2 HG01071.hp2 HG02717.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0011 | a0001c0001t0001g0280 a0001c0001t0011g0281 a0001c0001t0011g0282 |
3 | 335 | 0.0090 | 18 | c.-40 others(39): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
CHRNA10_chr11_3660587_3676384 | 3663063 | C | CTCATCTC others(11): Show |
downstream_gene_variant | MODIFIER | HG01358.hp1 HG02132.hp2 HG02155.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0011 | a0001c0001t0001g0002 a0001c0001t0001g0080 a0001c0001t0011g0072 |
3 | 437 | 0.0069 | 18 | c.*30 others(29): Show |
CHRNA10 | ENSG00000129749.3 | transcript | ENST00000250699.2 | protein_coding | 2523 | chr11 | TogoVar | |||||||
CHRNA4_chr20_63338223_63366349 | 63359913 | G | GCCGGGCG others(11): Show |
intron_variant | MODIFIER | HG00544.hp2 HG00597.hp1 HG01258.hp1 others(5): Show |
a0001 | a0001c0004a0001c0005 | a0001c0004t0002a0001c0005t0019 | a0001c0004t0002g0007 a0001c0004t0002g0047 a0001c0004t0002g0048 others(4): Show |
8 | 163 | 0.0491 | 18 | c.77- others(31): Show |
CHRNA4 | ENSG00000101204.18 | transcript | ENST00000370263.9 | protein_coding | 1/5 | chr20 | TogoVar | |||||||
CHRNA5_chr15_78560520_78600269 | 78570424 | A | ATTTTTTT others(11): Show |
intron_variant | MODIFIER | NA18943.hp1 | a0002 | a0002c0002 | a0002c0002t0003 | a0002c0002t0003g0141 | 1 | 89 | 0.0112 | 18 | c.106 others(35): Show |
CHRNA5 | ENSG00000169684.13 | transcript | ENST00000299565.9 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
CHRNA7_chr15_32025515_32178018 | 32074666 | A | ATTATTAT others(11): Show |
intron_variant | MODIFIER | HG02630.hp1 HG03225.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0029 | a0001c0001t0001g0211 a0001c0001t0029g0212 |
2 | 305 | 0.0066 | 18 | c.196 others(37): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
CHRNA7_chr15_32025515_32178018 | 32098871 | A | AACACACA others(11): Show |
intron_variant | MODIFIER | HG01192.hp2 HG02129.hp2 HG02155.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002a0001c0005 | a0001c0001t0001a0001c0002t0006a0001c0005t0004others(1): Show | a0001c0001t0001g0146 a0001c0002t0006g0226 a0001c0005t0004g0062 others(1): Show |
4 | 11 | 0.3636 | 18 | c.196 others(35): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
CHRNA9_chr4_40330333_40360217 | 40350693 | T | TACACACA others(11): Show |
intron_variant | MODIFIER | HG00642.hp1 HG01070.hp2 HG01071.hp1 others(3): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0001a0001c0005t0003 | a0001c0001t0001g0095 a0001c0005t0003g0011 |
6 | 28 | 0.2143 | 18 | c.898 others(35): Show |
CHRNA9 | ENSG00000174343.6 | transcript | ENST00000310169.3 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
CHRNB3_chr8_42692366_42742407 | 42717403 | A | AAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG00621.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0249 | 1 | 16 | 0.0625 | 18 | c.249 others(35): Show |
CHRNB3 | ENSG00000147432.7 | transcript | ENST00000289957.3 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
CHRNB4_chr15_78619111_78646210 | 78626384 | G | GTGTGTGT others(11): Show |
intron_variant | MODIFIER | HG03195.hp1 NA18906.hp1 |
a0001 | a0001c0001a0001c0005 | a0001c0001t0003a0001c0005t0001 | a0001c0001t0003g0104 a0001c0005t0001g0111 |
2 | 11 | 0.1818 | 18 | c.133 others(37): Show |
CHRNB4 | ENSG00000117971.12 | transcript | ENST00000261751.8 | protein_coding | 5/5 | chr15 | TogoVar | |||||||
CHST11_chr12_104451948_104767014 | 104475658 | T | TTATATAT others(11): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00423.hp1 HG01255.hp2 others(18): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0007 a0001c0001t0001g0018 a0001c0001t0001g0031 others(18): Show |
21 | 112 | 0.1875 | 18 | c.118 others(37): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
CHST11_chr12_104451948_104767014 | 104475688 | A | ATATATAT others(11): Show |
intron_variant | MODIFIER | HG00735.hp1 HG01255.hp1 HG01361.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0158 a0001c0001t0002g0098 a0001c0001t0002g0139 others(6): Show |
9 | 166 | 0.0542 | 18 | c.118 others(37): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
CHST11_chr12_104451948_104767014 | 104519071 | G | GGTGTGTG others(11): Show |
intron_variant | MODIFIER | HG02055.hp1 HG02886.hp1 NA18906.hp2 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0014a0001c0001t0065 | a0001c0001t0002g0220 a0001c0001t0014g0176 a0001c0001t0065g0056 |
3 | 98 | 0.0306 | 18 | c.118 others(37): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
CHST11_chr12_104451948_104767014 | 104544138 | A | AAGAAAGA others(11): Show |
intron_variant | MODIFIER | HG02602.hp2 | a0001 | a0001c0001 | a0001c0001t0008 | a0001c0001t0008g0233 | 1 | 169 | 0.0059 | 18 | c.119 others(37): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
CHST11_chr12_104451948_104767014 | 104544769 | T | TCCCCCCC others(11): Show |
intron_variant | MODIFIER | HG01256.hp2 HG02055.hp1 HG03195.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0023others(2): Show | a0001c0001t0001g0080 a0001c0001t0002g0220 a0001c0001t0023g0196 others(2): Show |
5 | 87 | 0.0575 | 18 | c.119 others(37): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
CHST11_chr12_104451948_104767014 | 104553568 | C | CGAGAGAG others(11): Show |
intron_variant | MODIFIER | HG02055.hp1 HG02723.hp2 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0042 | a0001c0001t0002g0220 a0001c0001t0042g0194 |
2 | 29 | 0.0690 | 18 | c.119 others(37): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
CHST11_chr12_104451948_104767014 | 104637302 | T | TAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG01109.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0221 | 1 | 32 | 0.0313 | 18 | c.204 others(37): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
CHST11_chr12_104451948_104767014 | 104722155 | A | AGTGTGTG others(11): Show |
intron_variant | MODIFIER | HG00738.hp2 HG01081.hp1 HG01109.hp2 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0012others(5): Show | a0001c0001t0001g0049 a0001c0001t0001g0144 a0001c0001t0001g0213 others(9): Show |
12 | 49 | 0.2449 | 18 | c.205 others(37): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
CHST11_chr12_104451948_104767014 | 104750428 | C | CTTTTTTT others(11): Show |
intron_variant | MODIFIER | HG01167.hp1 HG01169.hp1 HG02895.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0007a0001c0001t0035 | a0001c0001t0001g0213 a0001c0001t0007g0214 a0001c0001t0007g0215 others(1): Show |
4 | 75 | 0.0533 | 18 | c.205 others(35): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
CHST11_chr12_104451948_104767014 | 104756532 | G | GGTGTGTG others(11): Show |
intron_variant | MODIFIER | HG00738.hp2 HG01192.hp2 NA19060.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0008a0001c0001t0046 | a0001c0001t0001g0144 a0001c0001t0001g0226 a0001c0001t0008g0232 others(1): Show |
4 | 58 | 0.0690 | 18 | c.205 others(33): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
CHST11_chr12_104451948_104767014 | 104761464 | T | TACACACA others(11): Show |
3_prime_UTR_variant | MODIFIER | HG01243.hp1 NA18945.hp2 |
a0001 | a0001c0001 | a0001c0001t0054a0001c0001t0058 | a0001c0001t0054g0003 a0001c0001t0058g0121 |
2 | 22 | 0.0909 | 18 | c.*36 others(29): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 3/3 | 3699 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CHST12_chr7_2398611_2453484 | 2425691 | C | CTTTTTTT others(11): Show |
intron_variant | MODIFIER | HG01891.hp2 HG03471.hp1 NA19030.hp2 |
a0001 | a0001c0001 | a0001c0001t0196a0001c0001t0290a0001c0001t0292 | a0001c0001t0196g0109 a0001c0001t0290g0104 a0001c0001t0292g0261 |
3 | 314 | 0.0096 | 18 | c.-77 others(35): Show |
CHST12 | ENSG00000136213.10 | transcript | ENST00000618655.2 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CHST15_chr10_124002668_124098598 | 124043887 | A | AGGAACAG others(11): Show |
intron_variant | MODIFIER | NA19070.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0322 | 1 | 376 | 0.0027 | 18 | c.886 others(33): Show |
CHST15 | ENSG00000182022.18 | transcript | ENST00000435907.6 | protein_coding | 3/7 | chr10 | TogoVar | |||||||
CHST15_chr10_124002668_124098598 | 124044097 | G | GGGAACGG others(11): Show |
intron_variant | MODIFIER | HG02109.hp1 HG02109.hp2 HG02257.hp2 others(16): Show |
a0001a0004 | a0001c0001a0001c0003a0001c0004others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(7): Show | a0001c0001t0001g0007 a0001c0001t0001g0168 a0001c0001t0001g0169 others(15): Show |
19 | 389 | 0.0488 | 18 | c.886 others(33): Show |
CHST15 | ENSG00000182022.18 | transcript | ENST00000435907.6 | protein_coding | 3/7 | chr10 | TogoVar | |||||||
CHST15_chr10_124002668_124098598 | 124044119 | A | ACGGCACA others(11): Show |
intron_variant | MODIFIER | HG02280.hp1 HG03130.hp2 |
a0001 | a0001c0001a0001c0018 | a0001c0001t0025a0001c0018t0015 | a0001c0001t0025g0161 a0001c0018t0015g0016 |
2 | 342 | 0.0058 | 18 | c.886 others(33): Show |
CHST15 | ENSG00000182022.18 | transcript | ENST00000435907.6 | protein_coding | 3/7 | chr10 | TogoVar | |||||||
CHST15_chr10_124002668_124098598 | 124044154 | A | ACGGCACA others(11): Show |
intron_variant | MODIFIER | HG02572.hp1 HG02647.hp2 HG03453.hp1 others(1): Show |
a0001 | a0001c0007 | a0001c0007t0002a0001c0007t0004a0001c0007t0010 | a0001c0007t0002g0017 a0001c0007t0002g0217 a0001c0007t0004g0293 others(1): Show |
4 | 387 | 0.0103 | 18 | c.886 others(33): Show |
CHST15 | ENSG00000182022.18 | transcript | ENST00000435907.6 | protein_coding | 3/7 | chr10 | TogoVar | |||||||
CHST6_chr16_75467052_75500441 | 75491188 | A | AATATATA others(11): Show |
intron_variant | MODIFIER | HG01192.hp2 | a0001 | a0001c0001 | a0001c0001t0011 | a0001c0001t0011g0008 | 1 | 210 | 0.0048 | 18 | c.-92 others(35): Show |
CHST6 | ENSG00000183196.10 | transcript | ENST00000332272.9 | protein_coding | 1/2 | chr16 | TogoVar | |||||||
CHST6_chr16_75467052_75500441 | 75491190 | A | AAAAAAAA others(11): Show |
intron_variant | MODIFIER | NA18964.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0184 | 1 | 106 | 0.0094 | 18 | c.-92 others(35): Show |
CHST6 | ENSG00000183196.10 | transcript | ENST00000332272.9 | protein_coding | 1/2 | chr16 | TogoVar | |||||||
CHST6_chr16_75467052_75500441 | 75491190 | A | AAAAAATA others(11): Show |
intron_variant | MODIFIER | HG03516.hp2 NA18967.hp1 |
a0001 | a0001c0001 | a0001c0001t0028a0001c0001t0091 | a0001c0001t0028g0060 a0001c0001t0091g0058 |
2 | 107 | 0.0187 | 18 | c.-92 others(35): Show |
CHST6 | ENSG00000183196.10 | transcript | ENST00000332272.9 | protein_coding | 1/2 | chr16 | TogoVar | |||||||
CHST8_chr19_33616953_33778506 | 33618626 | C | CTCTTCTT others(11): Show |
upstream_gene_variant | MODIFIER | HG02630.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0211 | 1 | 91 | 0.0110 | 18 | c.-38 others(29): Show |
CHST8 | ENSG00000124302.13 | transcript | ENST00000650847.1 | protein_coding | 3326 | chr19 | TogoVar | |||||||
CHST8_chr19_33616953_33778506 | 33618626 | C | CTCTTCTT others(11): Show |
upstream_gene_variant | MODIFIER | HG01243.hp2 HG01891.hp1 HG02258.hp2 others(8): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0010others(1): Show | a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0029 others(8): Show |
11 | 101 | 0.1089 | 18 | c.-38 others(29): Show |
CHST8 | ENSG00000124302.13 | transcript | ENST00000650847.1 | protein_coding | 3326 | chr19 | TogoVar | |||||||
CHST8_chr19_33616953_33778506 | 33694093 | C | CATATATA others(11): Show |
intron_variant | MODIFIER | HG02630.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0203 | 1 | 14 | 0.0714 | 18 | c.130 others(35): Show |
CHST8 | ENSG00000124302.13 | transcript | ENST00000650847.1 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
CHST8_chr19_33616953_33778506 | 33745794 | C | CCCAGGGG others(11): Show |
intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(116): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0002c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0012 a0001c0001t0001g0020 a0001c0001t0001g0022 others(116): Show |
119 | 252 | 0.4722 | 18 | c.131 others(37): Show |
CHST8 | ENSG00000124302.13 | transcript | ENST00000650847.1 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
CHST8_chr19_33616953_33778506 | 33757496 | A | AAGAAAGA others(11): Show |
intron_variant | MODIFIER | HG03017.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0188 | 1 | 215 | 0.0047 | 18 | c.131 others(37): Show |
CHST8 | ENSG00000124302.13 | transcript | ENST00000650847.1 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
CHST9_chr18_26901481_27190308 | 27047388 | T | TTGTGTGT others(11): Show |
intron_variant | MODIFIER | HG00280.hp2 HG01256.hp2 HG01258.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0011others(2): Show | a0001c0001t0001g0189 a0001c0001t0003g0157 a0001c0001t0011g0097 others(3): Show |
6 | 64 | 0.0938 | 18 | c.160 others(35): Show |
CHST9 | ENSG00000154080.14 | transcript | ENST00000618847.5 | protein_coding | 3/5 | chr18 | TogoVar | |||||||
CHST9_chr18_26901481_27190308 | 27053130 | G | GGAAGAAG others(11): Show |
intron_variant | MODIFIER | HG03098.hp2 NA18994.hp2 NA19085.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0087 | a0001c0001t0001g0189 a0001c0001t0002g0232 a0001c0001t0087g0257 |
3 | 94 | 0.0319 | 18 | c.122 others(35): Show |
CHST9 | ENSG00000154080.14 | transcript | ENST00000618847.5 | protein_coding | 2/5 | chr18 | TogoVar | |||||||
CHST9_chr18_26901481_27190308 | 27053130 | G | GGAAGAAG others(11): Show |
intron_variant | MODIFIER | HG00609.hp2 HG02109.hp1 |
a0001 | a0001c0001 | a0001c0001t0007a0001c0001t0050 | a0001c0001t0007g0019 a0001c0001t0050g0171 |
2 | 93 | 0.0215 | 18 | c.122 others(35): Show |
CHST9 | ENSG00000154080.14 | transcript | ENST00000618847.5 | protein_coding | 2/5 | chr18 | TogoVar | |||||||
CHST9_chr18_26901481_27190308 | 27053218 | G | GGAAGAAG others(11): Show |
intron_variant | MODIFIER | HG01106.hp2 HG01978.hp1 HG02602.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0049 a0001c0001t0002g0195 a0001c0001t0002g0196 others(3): Show |
6 | 158 | 0.0380 | 18 | c.122 others(35): Show |
CHST9 | ENSG00000154080.14 | transcript | ENST00000618847.5 | protein_coding | 2/5 | chr18 | TogoVar |