Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CLASP2_chr3_33491245_33723254	33568553	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG02257.hp1 HG02280.hp1 others(2): Show HG00597.hp1 HG02257.hp1 HG02280.hp1 HG02976.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0022 a0001c0001t0005g0272 a0001c0001t0005g0273 others(2): Show a0001c0001t0002g0022 a0001c0001t0005g0272 a0001c0001t0005g0273 a0001c0001t0005g0275 a0001c0001t0005g0276	5	278	0.0180	18	c.276 others(37): Show c.2764-1837_2764-1820dupTTTTTTTTTTTTTTTTTT	CLASP2	ENSG00000163539.19	transcript	ENST00000682230.1	protein_coding	26/38			chr3	TogoVar
CLASP2_chr3_33491245_33723254	33667406	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02647.hp1 HG02970.hp2 others(4): Show HG02622.hp1 HG02647.hp1 HG02970.hp2 HG03098.hp2 HG03225.hp2 HG03486.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0155 a0001c0001t0001g0157 a0001c0001t0001g0159 others(4): Show a0001c0001t0001g0155 a0001c0001t0001g0157 a0001c0001t0001g0159 a0001c0001t0001g0166 a0001c0001t0001g0218 a0001c0001t0001g0230 a0001c0001t0004g0165	7	278	0.0252	18	c.645 others(35): Show c.645-3909_645-3892dupTTTTTTTTTTTTTTTTTT	CLASP2	ENSG00000163539.19	transcript	ENST00000682230.1	protein_coding	6/38			chr3	TogoVar
CLASRP_chr19_45034045_45075956	45063436	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18982.hp1 NA19055.hp1 NA18982.hp1 NA19055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0197 a0001c0001t0001g0240 a0001c0001t0001g0197 a0001c0001t0001g0240	2	364	0.0055	18	c.906 others(33): Show c.906-566_906-549dupTTTTTTTTTTTTTTTTTT	CLASRP	ENSG00000104859.15	transcript	ENST00000221455.8	protein_coding	11/20		INFO_REALIGN_3_PRIME	chr19	TogoVar
CLCA1_chr1_86463927_86505259	86486017	G G	GGAGAGAG others(11): Show GGAGAGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	NA18978.hp1 NA18991.hp2 NA19011.hp1 others(1): Show NA18978.hp1 NA18991.hp2 NA19011.hp1 NA19091.hp1	a0001 a0001	a0001c0003 a0001c0004 a0001c0003 a0001c0004	a0001c0003t0001 a0001c0004t0001 a0001c0003t0001 a0001c0004t0001	a0001c0003t0001g0031 a0001c0003t0001g0336 a0001c0004t0001g0089 a0001c0003t0001g0031 a0001c0003t0001g0336 a0001c0004t0001g0089	4	440	0.0091	18	c.954 others(33): Show c.954+464_954+481dupAGAGAGAGAGAGAGAGAG	CLCA1	ENSG00000016490.16	transcript	ENST00000394711.2	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
CLCN3_chr4_169615578_169728673	169720526	T T	TTCTCTCT others(11): Show TTCTCTCTCTCTCTCTCTC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02040.hp2 HG02602.hp1 HG03688.hp1 HG02040.hp2 HG02602.hp1 HG03688.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0211 a0001c0001t0016g0219 a0001c0001t0016g0226 a0001c0001t0016g0211 a0001c0001t0016g0219 a0001c0001t0016g0226	3	288	0.0104	18	c.54 others(27): Show c.545_*562dupCTCTCTCTCTCTCTCTCT	CLCN3	ENSG00000109572.16	transcript	ENST00000513761.6	protein_coding	13/13	563	INFO_REALIGN_3_PRIME	chr4	TogoVar
CLCN4_chrX_10151975_10242660	10153138	T T	TATATATA others(11): Show TATATATATATATATATAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01257.hp2 HG01258.hp1 HG03710.hp1 others(4): Show HG01257.hp2 HG01258.hp1 HG03710.hp1 NA18945.hp1 NA18986.hp1 NA19070.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004	a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0219 others(4): Show a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0219 a0001c0001t0002g0250 a0001c0001t0003g0223 a0001c0001t0003g0229 a0001c0001t0004g0258	7	264	0.0265	18	c.-42 others(29): Show c.-4237_-4236insATATATATATATATATAC	CLCN4	ENSG00000073464.13	transcript	ENST00000380833.9	protein_coding		3836		chrX	TogoVar
CLCN4_chrX_10151975_10242660	10161124	G G	GCTCTCTC others(11): Show GCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0053 a0001c0002t0002g0053	1	264	0.0038	18	c.-12 others(35): Show c.-12+2594_-12+2611dupCTCTCTCTCTCTCTCTCT	CLCN4	ENSG00000073464.13	transcript	ENST00000380833.9	protein_coding	2/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
CLCN4_chrX_10151975_10242660	10175949	T T	TCCCCCTC others(11): Show TCCCCCTCCCTCCCTCTCC	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp1 HG00323.hp2 others(112): Show HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00438.hp1 HG00438.hp2 HG00597.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00735.hp1 HG00738.hp1 HG01099.hp1 HG01109.hp1 HG01123.hp1 HG01255.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp2 HG01496.hp2 HG01884.hp1 HG01884.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01981.hp2 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02135.hp1 HG02155.hp1 HG02155.hp2 HG02273.hp2 HG02293.hp2 HG02451.hp1 HG02602.hp1 HG02647.hp1 HG02683.hp2 HG02922.hp1 HG02976.hp2 HG03490.hp1 HG03516.hp1 HG03669.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG04115.hp1 HG06807.hp2 NA18612.hp1 NA18747.hp1 NA18942.hp2 NA18945.hp1 NA18946.hp1 NA18948.hp1 NA18952.hp1 NA18953.hp1 NA18955.hp1 NA18959.hp1 NA18960.hp1 NA18962.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18970.hp1 NA18971.hp1 NA18973.hp1 NA18974.hp1 NA18977.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp1 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18990.hp1 NA18994.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp1 NA19009.hp1 NA19010.hp1 NA19012.hp1 NA19030.hp2 NA19056.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp1 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19080.hp1 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19091.hp1 NA19240.hp2 NA20905.hp1 NA21309.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0002c0004 others(1): Show a0001c0001 a0001c0002 a0002c0004 a0003c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(21): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0015 a0001c0001t0017 a0001c0001t0020 a0001c0001t0024 a0001c0001t0030 a0001c0001t0031 a0001c0001t0033 a0001c0001t0035 a0001c0001t0040 a0001c0002t0002 a0001c0002t0004 a0001c0002t0037 a0001c0002t0038 a0001c0002t0039 a0002c0004t0003 a0003c0006t0027	a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0172 others(112): Show a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0172 a0001c0001t0001g0175 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0197 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0208 a0001c0001t0001g0215 a0001c0001t0001g0217 a0001c0001t0001g0219 a0001c0001t0001g0225 a0001c0001t0001g0227 a0001c0001t0001g0230 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0238 a0001c0001t0001g0242 a0001c0001t0001g0244 a0001c0001t0001g0246 a0001c0001t0001g0249 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0257 a0001c0001t0001g0259 a0001c0001t0002g0161 a0001c0001t0002g0164 a0001c0001t0002g0166 a0001c0001t0002g0193 a0001c0001t0002g0214 a0001c0001t0002g0220 a0001c0001t0002g0226 a0001c0001t0002g0234 a0001c0001t0002g0250 a0001c0001t0003g0157 a0001c0001t0003g0159 a0001c0001t0003g0160 a0001c0001t0003g0165 a0001c0001t0003g0167 a0001c0001t0003g0170 a0001c0001t0003g0174 a0001c0001t0003g0176 a0001c0001t0003g0178 a0001c0001t0003g0185 a0001c0001t0003g0189 a0001c0001t0003g0191 a0001c0001t0003g0192 a0001c0001t0003g0194 a0001c0001t0003g0195 a0001c0001t0003g0198 a0001c0001t0003g0207 a0001c0001t0003g0210 a0001c0001t0003g0211 a0001c0001t0003g0212 a0001c0001t0003g0213 a0001c0001t0003g0218 a0001c0001t0003g0221 a0001c0001t0003g0222 a0001c0001t0003g0223 a0001c0001t0003g0224 a0001c0001t0003g0228 a0001c0001t0003g0229 a0001c0001t0003g0237 a0001c0001t0003g0239 a0001c0001t0003g0240 a0001c0001t0004g0054 a0001c0001t0004g0121 a0001c0001t0004g0148 a0001c0001t0004g0158 a0001c0001t0004g0187 a0001c0001t0004g0190 a0001c0001t0004g0258 a0001c0001t0005g0079 a0001c0001t0008g0055 a0001c0001t0008g0056 a0001c0001t0010g0168 a0001c0001t0010g0169 a0001c0001t0011g0181 a0001c0001t0011g0243 a0001c0001t0011g0247 a0001c0001t0015g0203 a0001c0001t0017g0057 a0001c0001t0020g0173 a0001c0001t0024g0209 a0001c0001t0030g0255 a0001c0001t0031g0241 a0001c0001t0033g0216 a0001c0001t0035g0231 a0001c0001t0040g0156 a0001c0002t0002g0052 a0001c0002t0002g0053 a0001c0002t0004g0046 a0001c0002t0004g0048 a0001c0002t0004g0049 a0001c0002t0037g0032 a0001c0002t0038g0033 a0001c0002t0039g0155 a0002c0004t0003g0196 a0003c0006t0027g0248	115	264	0.4356	18	c.-11 others(35): Show c.-11-9072_-11-9071insCCCCTCCCTCCCTCTCCC	CLCN4	ENSG00000073464.13	transcript	ENST00000380833.9	protein_coding	2/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
CLCN4_chrX_10151975_10242660	10191692	A A	ATTTTTTT others(11): Show ATTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02109.hp1 HG02615.hp1 others(2): Show HG01891.hp2 HG02109.hp1 HG02615.hp1 HG03098.hp1 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0006 a0001c0001t0008 a0001c0001t0002 a0001c0001t0006 a0001c0001t0008	a0001c0001t0002g0096 a0001c0001t0006g0063 a0001c0001t0006g0065 others(2): Show a0001c0001t0002g0096 a0001c0001t0006g0063 a0001c0001t0006g0065 a0001c0001t0006g0068 a0001c0001t0008g0095	5	264	0.0189	18	c.245 others(35): Show c.245-3208_245-3191dupTTTTTTTTTTTTTTTTTT	CLCN4	ENSG00000073464.13	transcript	ENST00000380833.9	protein_coding	4/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
CLCN4_chrX_10151975_10242660	10212837	G G	GCACACAC others(11): Show GCACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01258.hp1 HG02615.hp1 others(5): Show HG01257.hp2 HG01258.hp1 HG02615.hp1 HG02622.hp1 HG02723.hp1 HG02976.hp1 HG03098.hp1 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0032	a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0002g0146 others(5): Show a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0002g0146 a0001c0001t0006g0063 a0001c0001t0006g0064 a0001c0001t0006g0065 a0001c0001t0006g0068 a0001c0001t0032g0067	8	264	0.0303	18	c.157 others(35): Show c.1576+186_1576+187insCACACACACACACACACA	CLCN4	ENSG00000073464.13	transcript	ENST00000380833.9	protein_coding	10/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
CLCN4_chrX_10151975_10242660	10216897	G G	GTGTGTGT others(11): Show GTGTGTGTGTATATATATA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02145.hp1 HG02451.hp2 others(4): Show HG00639.hp1 HG02145.hp1 HG02451.hp2 HG02683.hp1 HG03831.hp2 NA19081.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0023 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0023 a0001c0002t0002	a0001c0001t0001g0091 a0001c0001t0003g0071 a0001c0001t0003g0104 others(4): Show a0001c0001t0001g0091 a0001c0001t0003g0071 a0001c0001t0003g0104 a0001c0001t0003g0116 a0001c0001t0023g0122 a0001c0002t0002g0029 a0001c0002t0002g0041	7	264	0.0265	18	c.197 others(37): Show c.1975+2819_1975+2820insGTGTGTGTATATATATAT	CLCN4	ENSG00000073464.13	transcript	ENST00000380833.9	protein_coding	11/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
CLCN5_chrX_49917596_50104230	49924145	A A	ATTTTTTT others(11): Show ATTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0174 a0001c0001t0005g0174	1	175	0.0057	18	c.-12 others(35): Show c.-129+680_-129+681insTTTTTTTTTTTTTTTTTT	CLCN5	ENSG00000171365.17	transcript	ENST00000376091.8	protein_coding	2/14		INFO_REALIGN_3_PRIME	chrX	TogoVar
CLCN6_chr1_11801191_11848130	11827430	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02293.hp1 HG03239.hp1 HG03942.hp1 HG02293.hp1 HG03239.hp1 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0034 a0001c0001t0007g0035 a0001c0001t0007g0036 a0001c0001t0007g0034 a0001c0001t0007g0035 a0001c0001t0007g0036	3	290	0.0103	18	c.840 others(33): Show c.840+215_840+232dupTTTTTTTTTTTTTTTTTT	CLCN6	ENSG00000011021.23	transcript	ENST00000346436.11	protein_coding	10/22		INFO_REALIGN_3_PRIME	chr1	TogoVar
CLCN6_chr1_11801191_11848130	11830737	T T	TATAATAT others(11): Show TATAATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG03130.hp2 HG02257.hp1 HG03130.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0169 a0001c0003t0004g0173 a0001c0003t0004g0169 a0001c0003t0004g0173	2	290	0.0069	18	c.124 others(37): Show c.1248+1415_1248+1416insATAATATATATATATATA	CLCN6	ENSG00000011021.23	transcript	ENST00000346436.11	protein_coding	13/22			chr1	TogoVar
CLCNKB_chr1_16038782_16062308	16044356	T T	TACACACA others(11): Show TACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG03041.hp1 HG03195.hp1 others(6): Show HG02717.hp2 HG03041.hp1 HG03195.hp1 HG03453.hp1 HG03471.hp2 HG03540.hp1 HG03540.hp2 NA18964.hp1 NA18998.hp1	a0002 a0003 a0031 others(1): Show a0002 a0003 a0031 a0034	a0002c0003 a0002c0034 a0003c0002 others(3): Show a0002c0003 a0002c0034 a0003c0002 a0003c0019 a0031c0033 a0034c0036	a0002c0003t0003 a0002c0003t0004 a0002c0034t0006 others(4): Show a0002c0003t0003 a0002c0003t0004 a0002c0034t0006 a0003c0002t0005 a0003c0019t0008 a0031c0033t0002 a0034c0036t0010	a0002c0003t0003g0047 a0002c0003t0004g0124 a0002c0034t0006g0218 others(4): Show a0002c0003t0003g0047 a0002c0003t0004g0124 a0002c0034t0006g0218 a0003c0002t0005g0125 a0003c0019t0008g0064 a0031c0033t0002g0220 a0034c0036t0010g0219	9	428	0.0210	18	c.-7- others(31): Show c.-7-125_-7-108dupACACACACACACACACAC	CLCNKB	ENSG00000184908.20	transcript	ENST00000375679.9	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
CLDN10_chr13_95547720_95584759	95570858	G G	GTATATAT others(11): Show GTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG02717.hp1 HG02886.hp2 HG00323.hp2 HG02717.hp1 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0081 a0001c0001t0002g0103 a0001c0001t0002g0105 a0001c0001t0002g0081 a0001c0001t0002g0103 a0001c0001t0002g0105	3	400	0.0075	18	c.465 others(35): Show c.465-6364_465-6347dupTATATATATATATATATA	CLDN10	ENSG00000134873.10	transcript	ENST00000299339.3	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr13	TogoVar
CLDN10_chr13_95547720_95584759	95570858	G G	GTGTATAT others(11): Show GTGTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00738.hp1 others(4): Show HG00099.hp2 HG00280.hp1 HG00738.hp1 HG03490.hp2 NA18987.hp1 NA19007.hp1 NA19054.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0035 a0001c0001t0002g0039 a0001c0001t0002g0112 others(2): Show a0001c0001t0002g0035 a0001c0001t0002g0039 a0001c0001t0002g0112 a0001c0001t0002g0121 a0001c0001t0002g0123	7	400	0.0175	18	c.465 others(35): Show c.465-6372_465-6371insGTATATATATATATATAT	CLDN10	ENSG00000134873.10	transcript	ENST00000299339.3	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr13	TogoVar
CLDN10_chr13_95547720_95584759	95575590	C C	CGTGTGTG others(11): Show CGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00323.hp1 others(84): Show HG00099.hp1 HG00140.hp2 HG00323.hp1 HG00423.hp2 HG00438.hp2 HG00544.hp2 HG00609.hp2 HG00621.hp1 HG00642.hp2 HG00673.hp1 HG01074.hp1 HG01099.hp1 HG01167.hp2 HG01175.hp1 HG01255.hp1 HG01255.hp2 HG01261.hp1 HG01433.hp1 HG01515.hp2 HG01517.hp2 HG01934.hp1 HG01943.hp1 HG01981.hp2 HG02004.hp2 HG02015.hp1 HG02083.hp1 HG02109.hp2 HG02129.hp2 HG02165.hp2 HG02451.hp2 HG02615.hp1 HG02698.hp1 HG02698.hp2 HG02970.hp1 HG03017.hp1 HG03209.hp2 HG03239.hp1 HG03491.hp2 HG03492.hp1 HG03669.hp1 HG03688.hp2 HG03927.hp1 HG03942.hp2 NA18612.hp1 NA18942.hp1 NA18944.hp2 NA18947.hp1 NA18952.hp2 NA18957.hp2 NA18961.hp2 NA18965.hp2 NA18970.hp1 NA18973.hp2 NA18979.hp1 NA18982.hp1 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18985.hp2 NA18994.hp2 NA18995.hp2 NA18999.hp2 NA19001.hp2 NA19002.hp2 NA19004.hp2 NA19010.hp2 NA19011.hp1 NA19012.hp2 NA19055.hp2 NA19056.hp2 NA19058.hp1 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19066.hp1 NA19067.hp2 NA19068.hp2 NA19079.hp1 NA19080.hp1 NA19082.hp2 NA19084.hp2 NA19085.hp1 NA19087.hp1 NA19090.hp2 NA19091.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0005 a0001c0001 a0001c0004 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0011 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0011 a0001c0004t0001 a0001c0005t0001	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 others(38): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0016 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0056 a0001c0001t0001g0144 a0001c0001t0001g0150 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0158 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0166 a0001c0001t0001g0168 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0234 a0001c0001t0001g0236 a0001c0001t0001g0239 a0001c0001t0002g0156 a0001c0001t0011g0004 a0001c0004t0001g0116 a0001c0005t0001g0045	87	400	0.2175	18	c.465 others(35): Show c.465-1629_465-1628insGTGTGTGTGTGTGTGTGT	CLDN10	ENSG00000134873.10	transcript	ENST00000299339.3	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr13	TogoVar
CLDN11_chr3_170413868_170439691	170415139	G G	GTATATAT others(11): Show GTATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0035 a0001c0001t0035	a0001c0001t0035g0062 a0001c0001t0035g0062	1	408	0.0025	18	c.-39 others(29): Show c.-3928_-3927insTATATATATATATATATA	CLDN11	ENSG00000013297.12	transcript	ENST00000064724.8	protein_coding		3728		chr3	TogoVar
CLDN14_chr21_36455621_36485122	36483937	A A	ACCTTCTG others(11): Show ACCTTCTGAGCCTCTCTTG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18612.hp1 NA18612.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0162 a0001c0001t0002g0162	1	424	0.0024	18	c.-45 others(29): Show c.-4542_-4525dupCAAGAGAGGCTCAGAAGG	CLDN14	ENSG00000159261.12	transcript	ENST00000399135.6	protein_coding		3816		chr21	TogoVar
CLDN16_chr3_190383163_190417138	190392059	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG02622.hp1 HG02723.hp1 HG01081.hp2 HG02622.hp1 HG02723.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0026 a0002c0002t0004g0026	3	438	0.0069	18	c.114 others(35): Show c.114+3633_114+3634insTTTTTTTTTTTTTTTTTT	CLDN16	ENSG00000113946.4	transcript	ENST00000264734.3	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr3	TogoVar
CLDN19_chr1_42728093_42745236	42729443	A A	AATATATA others(11): Show AATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02896.hp1 HG02897.hp1 HG02896.hp1 HG02897.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0008 a0001c0002t0004g0008	2	428	0.0047	18	c.56 others(29): Show c.5642_*5643insATATATATATATATATAT	CLDN19	ENSG00000164007.11	transcript	ENST00000296387.6	protein_coding		3649		chr1	TogoVar
CLDN19_chr1_42728093_42745236	42729447	A A	AATATATA others(11): Show AATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01952.hp1 HG03041.hp1 NA19088.hp2 HG01952.hp1 HG03041.hp1 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0030 a0001c0001t0001g0001 a0001c0001t0001g0030	3	428	0.0070	18	c.56 others(29): Show c.5638_*5639insATATATATATATATATAT	CLDN19	ENSG00000164007.11	transcript	ENST00000296387.6	protein_coding		3645		chr1	TogoVar
CLDN19_chr1_42728093_42745236	42729449	A A	AATATATA others(11): Show AATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02083.hp1 HG02129.hp2 HG03516.hp1 others(14): Show HG02083.hp1 HG02129.hp2 HG03516.hp1 HG03942.hp1 HG04184.hp1 NA18939.hp2 NA18946.hp1 NA18954.hp2 NA18961.hp2 NA18962.hp2 NA18979.hp1 NA18983.hp2 NA18987.hp2 NA19005.hp2 NA19006.hp2 NA19057.hp2 NA19065.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0001 a0001c0002t0004 a0002c0003t0001 a0001c0001t0001 a0001c0002t0004 a0002c0003t0001	a0001c0001t0001g0001 a0001c0001t0001g0043 a0001c0002t0004g0008 others(1): Show a0001c0001t0001g0001 a0001c0001t0001g0043 a0001c0002t0004g0008 a0002c0003t0001g0011	17	428	0.0397	18	c.56 others(29): Show c.5636_*5637insATATATATATATATATAT	CLDN19	ENSG00000164007.11	transcript	ENST00000296387.6	protein_coding		3643		chr1	TogoVar
CLDN19_chr1_42728093_42745236	42729451	A A	AAAAAATA others(11): Show AAAAAATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00733.hp1 HG00733.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	428	0.0023	18	c.56 others(29): Show c.5634_*5635insATATATATATATATTTTT	CLDN19	ENSG00000164007.11	transcript	ENST00000296387.6	protein_coding		3641		chr1	TogoVar
CLDN19_chr1_42728093_42745236	42729451	A A	AAAATATA others(11): Show AAAATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00673.hp1 HG02602.hp1 HG02738.hp2 HG00673.hp1 HG02602.hp1 HG02738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	3	428	0.0070	18	c.56 others(29): Show c.5634_*5635insATATATATATATATATTT	CLDN19	ENSG00000164007.11	transcript	ENST00000296387.6	protein_coding		3641		chr1	TogoVar
CLDN19_chr1_42728093_42745236	42729451	A A	AATATATA others(11): Show AATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00735.hp2 HG01123.hp2 HG02074.hp1 others(6): Show HG00735.hp2 HG01123.hp2 HG02074.hp1 HG03704.hp1 HG04204.hp2 NA18977.hp1 NA19087.hp1 NA20752.hp1 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0001 a0002c0003t0001g0011 a0002c0003t0001g0039 a0001c0001t0001g0001 a0002c0003t0001g0011 a0002c0003t0001g0039	9	428	0.0210	18	c.56 others(29): Show c.5634_*5635insATATATATATATATATAT	CLDN19	ENSG00000164007.11	transcript	ENST00000296387.6	protein_coding		3641		chr1	TogoVar
CLDN1_chr3_190300707_190327446	190323003	T T	TACACACA others(11): Show TACACACACACACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01978.hp2 HG02055.hp1 HG03540.hp2 others(4): Show HG01978.hp2 HG02055.hp1 HG03540.hp2 NA18992.hp1 NA19057.hp1 NA19063.hp2 NA19078.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0004 a0001c0001t0007 a0001c0003t0010 a0001c0001t0004 a0001c0001t0007 a0001c0003t0010	a0001c0001t0004g0002 a0001c0001t0004g0219 a0001c0001t0007g0202 others(1): Show a0001c0001t0004g0002 a0001c0001t0004g0219 a0001c0001t0007g0202 a0001c0003t0010g0227	7	468	0.0150	18	c.-81 others(27): Show c.-815_-798dupGTGTGTGTGTGTGTGTGT	CLDN1	ENSG00000163347.6	transcript	ENST00000295522.4	protein_coding		558		chr3	TogoVar
CLDN1_chr3_190300707_190327446	190323027	C C	CACACACA others(11): Show CACACACACACACACACAG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18991.hp1 NA18991.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0215 a0001c0001t0001g0215	1	468	0.0021	18	c.-82 others(27): Show c.-822_-821insCTGTGTGTGTGTGTGTGT	CLDN1	ENSG00000163347.6	transcript	ENST00000295522.4	protein_coding		582		chr3	TogoVar
CLDN7_chr17_7254903_7267478	7265112	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00558.hp2 HG00738.hp2 others(14): Show HG00099.hp1 HG00558.hp2 HG00738.hp2 HG02273.hp1 NA18946.hp2 NA18947.hp2 NA18966.hp1 NA18975.hp1 NA18994.hp2 NA19004.hp2 NA19009.hp2 NA19011.hp2 NA19074.hp1 NA19078.hp1 NA20300.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0002c0002 a0005c0006 a0001c0001 a0002c0002 a0005c0006	a0001c0001t0001 a0002c0002t0002 a0005c0006t0002 a0001c0001t0001 a0002c0002t0002 a0005c0006t0002	a0001c0001t0001g0001 a0002c0002t0002g0002 a0002c0002t0002g0011 others(1): Show a0001c0001t0001g0001 a0002c0002t0002g0002 a0002c0002t0002g0011 a0005c0006t0002g0022	17	418	0.0407	18	c.-30 others(29): Show c.-3070_-3069insAAAAAAAAAAAAAAAAAA	CLDN7	ENSG00000181885.18	transcript	ENST00000360325.11	protein_coding		2635		chr17	TogoVar
CLDN8_chr21_30209006_30221097	30210412	C C	CATATATA others(11): Show CATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02129.hp2 NA18947.hp2 HG02129.hp2 NA18947.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0007 a0002c0002t0007	a0002c0002t0007g0000 a0002c0002t0007g0000	2	466	0.0043	18	c.48 others(29): Show c.4835_*4836insATATATATATATATATAT	CLDN8	ENSG00000156284.6	transcript	ENST00000399899.2	protein_coding		3593		chr21	TogoVar
CLDN8_chr21_30209006_30221097	30210520	C C	CATATATA others(11): Show CATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp2 HG02257.hp2 HG02486.hp2 others(2): Show HG01884.hp2 HG02257.hp2 HG02486.hp2 HG02572.hp2 HG03041.hp2	a0001 a0003 a0006 a0001 a0003 a0006	a0001c0001 a0003c0003 a0006c0006 a0001c0001 a0003c0003 a0006c0006	a0001c0001t0003 a0003c0003t0001 a0006c0006t0003 a0001c0001t0003 a0003c0003t0001 a0006c0006t0003	a0001c0001t0003g0000 a0003c0003t0001g0000 a0006c0006t0003g0000 a0001c0001t0003g0000 a0003c0003t0001g0000 a0006c0006t0003g0000	5	466	0.0107	18	c.47 others(29): Show c.4727_*4728insATATATATATATATATAT	CLDN8	ENSG00000156284.6	transcript	ENST00000399899.2	protein_coding		3485		chr21	TogoVar
CLEC10A_chr17_7069537_7085251	7070576	G G	GGAAAGAA others(11): Show GGAAAGAAAAGAAAGAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20752.hp2 NA21309.hp2 NA20752.hp2 NA21309.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0004 a0001c0002t0001 a0001c0002t0004	a0001c0002t0001g0038 a0001c0002t0004g0058 a0001c0002t0001g0038 a0001c0002t0004g0058	2	458	0.0044	18	c.44 others(29): Show c.4477_*4478insTTTTCTTTCTTTTCTTTC	CLEC10A	ENSG00000132514.14	transcript	ENST00000416562.7	protein_coding		3960		chr17	TogoVar
CLEC12B_chr12_10005627_10023796	10010200	T T	TCACACAC others(11): Show TCACACACACACACACACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0010 a0002c0004t0001g0010	1	466	0.0022	18	c.-56 others(27): Show c.-560_-559insCACACACACACACACACA	CLEC12B	ENSG00000256660.7	transcript	ENST00000338896.11	protein_coding		426		chr12	TogoVar
CLEC16A_chr16_10939564_11187186	10986012	A A	ATTTTTTT others(11): Show ATTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0120 a0001c0001t0002g0120	1	274	0.0037	18	c.107 others(37): Show c.1071+3040_1071+3057dupTTTTTTTTTTTTTTTTTT	CLEC16A	ENSG00000038532.17	transcript	ENST00000409790.6	protein_coding	10/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CLEC16A_chr16_10939564_11187186	11114128	C C	CGTGTGTG others(11): Show CGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0222 a0001c0002t0006g0222	1	274	0.0037	18	c.211 others(37): Show c.2117-6454_2117-6437dupGTGTGTGTGTGTGTGTGT	CLEC16A	ENSG00000038532.17	transcript	ENST00000409790.6	protein_coding	19/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CLEC17A_chr19_14578084_14617035	14591898	A A	ATGTGTGT others(11): Show ATGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG03139.hp2 HG01934.hp2 HG03139.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0005 a0002c0002t0003 a0002c0002t0005	a0002c0002t0003g0073 a0002c0002t0005g0090 a0002c0002t0003g0073 a0002c0002t0005g0090	2	364	0.0055	18	c.200 others(33): Show c.200-363_200-346dupGTGTGTGTGTGTGTGTGT	CLEC17A	ENSG00000187912.12	transcript	ENST00000417570.6	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr19	TogoVar
CLEC1A_chr12_10064554_10103985	10087472	T T	TTATATAT others(11): Show TTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01952.hp1 HG01952.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0288 a0002c0002t0001g0288	1	384	0.0026	18	c.214 others(35): Show c.214+1634_214+1651dupTATATATATATATATATA	CLEC1A	ENSG00000150048.10	transcript	ENST00000315330.8	protein_coding	2/5			chr12	TogoVar
CLEC2B_chr12_9847369_9874354	9853071	A A	AAGAAAGA others(11): Show AAGAAAGAAAGAAAGAAAG	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00099.hp1 HG01934.hp1 HG03130.hp1 others(5): Show HG00099.hp1 HG01934.hp1 HG03130.hp1 HG03239.hp2 HG03471.hp1 HG03704.hp2 NA18906.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0017 a0001c0001t0011 a0001c0001t0017	a0001c0001t0011g0027 a0001c0001t0011g0039 a0001c0001t0011g0121 others(2): Show a0001c0001t0011g0027 a0001c0001t0011g0039 a0001c0001t0011g0121 a0001c0001t0017g0200 a0001c0001t0017g0207	8	454	0.0176	18	c.22 others(27): Show c.228_*229insCTTTCTTTCTTTCTTTCT	CLEC2B	ENSG00000110852.5	transcript	ENST00000228438.3	protein_coding	5/5	228		chr12	TogoVar
CLEC2L_chr7_139518685_139549985	139521056	A A	AGGGAGGG others(11): Show AGGGAGGGGGAGGGGGAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01884.hp2 HG02896.hp2 HG02897.hp1 others(4): Show HG01884.hp2 HG02896.hp2 HG02897.hp1 HG03130.hp1 HG03209.hp2 HG03471.hp2 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0003t0002 a0001c0003t0013 a0001c0001t0002 a0001c0003t0002 a0001c0003t0013	a0001c0001t0002g0034 a0001c0001t0002g0155 a0001c0001t0002g0157 others(3): Show a0001c0001t0002g0034 a0001c0001t0002g0155 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0003t0002g0030 a0001c0003t0013g0156	7	308	0.0227	18	c.-28 others(29): Show c.-2872_-2871insGGGAGGGGGAGGGGGAGG	CLEC2L	ENSG00000236279.7	transcript	ENST00000422142.7	protein_coding		2628		chr7	TogoVar
CLEC4A_chr12_8118617_8143607	8135047	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02970.hp1 HG04115.hp2 others(1): Show HG02257.hp1 HG02970.hp1 HG04115.hp2 NA18990.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0056 a0001c0001t0001g0205 a0001c0001t0006g0294 a0001c0001t0001g0056 a0001c0001t0001g0205 a0001c0001t0006g0294	4	458	0.0087	18	c.299 others(33): Show c.299-533_299-516dupTTTTTTTTTTTTTTTTTT	CLEC4A	ENSG00000111729.15	transcript	ENST00000229332.12	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr12	TogoVar
CLEC4C_chr12_7724383_7752375	7750822	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0222 a0001c0001t0002g0222	1	448	0.0022	18	c.-34 others(29): Show c.-3475_-3474insTTTTTTTTTTTTTTTTTT	CLEC4C	ENSG00000198178.11	transcript	ENST00000360345.8	protein_coding		3448		chr12	TogoVar
CLEC4F_chr2_70803643_70825599	70813595	T T	TCTCTTCT others(11): Show TCTCTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	NA18975.hp1 NA18975.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0003 a0003c0003t0003	a0003c0003t0003g0202 a0003c0003t0003g0202	1	414	0.0024	18	c.138 others(35): Show c.1388-998_1388-997insGAAAGAAAGAAAGAAGAG	CLEC4F	ENSG00000152672.8	transcript	ENST00000272367.7	protein_coding	4/6			chr2	TogoVar
CLEC4F_chr2_70803643_70825599	70824621	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA20905.hp2 NA20905.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0002 a0002c0001t0001g0002	1	414	0.0024	18	c.-40 others(29): Show c.-4099_-4098insTTTTTTTTTTTTTTTTTT	CLEC4F	ENSG00000152672.8	transcript	ENST00000272367.7	protein_coding		4023		chr2	TogoVar
CLEC4G_chr19_7723957_7737110	7724470	T T	TCACACAC others(11): Show TCACACACACACACACACA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0022 a0001c0002t0001g0022	1	432	0.0023	18	c.48 others(29): Show c.4895_*4896insTGTGTGTGTGTGTGTGTG	CLEC4G	ENSG00000182566.15	transcript	ENST00000328853.11	protein_coding		4486		chr19	TogoVar
CLEC4G_chr19_7723957_7737110	7732892	G G	GGAAAAAA others(11): Show GGAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp2 HG04184.hp2 NA19043.hp1 HG00408.hp2 HG04184.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	3	432	0.0069	18	c.-79 others(27): Show c.-791_-790insTTTTTTTTTTTTTTTTTC	CLEC4G	ENSG00000182566.15	transcript	ENST00000328853.11	protein_coding		783		chr19	TogoVar
CLEC4G_chr19_7723957_7737110	7732904	A A	AATATATA others(11): Show AATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18948.hp1 NA18948.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0008 a0001c0004t0001g0008	1	432	0.0023	18	c.-80 others(27): Show c.-803_-802insATATATATATATATATAT	CLEC4G	ENSG00000182566.15	transcript	ENST00000328853.11	protein_coding		795		chr19	TogoVar
CLEC4G_chr19_7723957_7737110	7732906	A A	AAAAAAAA others(11): Show AAAAAAAAAAAAAAAATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02723.hp2 NA18970.hp1 NA19089.hp1 HG02723.hp2 NA18970.hp1 NA19089.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0030 a0001c0001t0001g0004 a0001c0001t0001g0030	3	432	0.0069	18	c.-80 others(27): Show c.-805_-804insATATTTTTTTTTTTTTTT	CLEC4G	ENSG00000182566.15	transcript	ENST00000328853.11	protein_coding		797		chr19	TogoVar
CLEC4G_chr19_7723957_7737110	7732906	A A	AAAAAAAA others(11): Show AAAAAAAAAAAATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18945.hp2 NA19012.hp2 NA18945.hp2 NA19012.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0002 a0001c0001t0001g0004	2	432	0.0046	18	c.-80 others(27): Show c.-805_-804insATATATATTTTTTTTTTT	CLEC4G	ENSG00000182566.15	transcript	ENST00000328853.11	protein_coding		797		chr19	TogoVar
CLEC4G_chr19_7723957_7737110	7732906	A A	AAAAAAAA others(11): Show AAAAAAAAAATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp1 HG01123.hp2 HG01257.hp1 others(4): Show HG00408.hp1 HG01123.hp2 HG01257.hp1 HG01993.hp1 HG02622.hp1 HG03492.hp2 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0043 a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0043	7	432	0.0162	18	c.-80 others(27): Show c.-805_-804insATATATATATTTTTTTTT	CLEC4G	ENSG00000182566.15	transcript	ENST00000328853.11	protein_coding		797		chr19	TogoVar

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