Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
LCK_chr1_32246265_32291165	32272585	G G	GAAAGAGA others(12): Show GAAAGAGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG03704.hp1 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0074 a0001c0001t0001g0074	1	274	0.0037	19	c.-5- others(34): Show c.-5-1737_-5-1719dupAGAGAGAGAGAGAGAGAAA		LCK	ENSG00000182866.18	transcript	ENST00000336890.10	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr1	TogoVar
LCK_chr1_32246265_32291165	32272587	A A	AAGAGAGA others(12): Show AAGAGAGAGAGAGAGAGAAG	intron_variant intron_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0103 a0001c0001t0001g0103	1	274	0.0037	19	c.-5- others(34): Show c.-5-1720_-5-1719insGAGAGAGAGAGAGAGAGAA		LCK	ENSG00000182866.18	transcript	ENST00000336890.10	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr1	TogoVar
LCK_chr1_32246265_32291165	32272604	A A	AAAGAGAG others(12): Show AAAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0005 a0005	a0005c0007 a0005c0007	a0005c0007t0001 a0005c0007t0001	a0005c0007t0001g0101 a0005c0007t0001g0101	1	274	0.0037	19	c.-5- others(34): Show c.-5-1703_-5-1702insGAAGAGAGAGAGAGAGAGA		LCK	ENSG00000182866.18	transcript	ENST00000336890.10	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr1	TogoVar
LCK_chr1_32246265_32291165	32272605	A A	AAGAGAGA others(12): Show AAGAGAGAGAGAGAGAGAAG	intron_variant intron_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0177 a0001c0001t0001g0177	1	274	0.0037	19	c.-5- others(34): Show c.-5-1702_-5-1701insGAGAGAGAGAGAGAGAGAA		LCK	ENSG00000182866.18	transcript	ENST00000336890.10	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr1	TogoVar
LCLAT1_chr2_30442246_30649225	30455079	A A	ACAGTGGA others(12): Show ACAGTGGATATAATTGGATC	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0203 a0001c0001t0001g0203	1	366	0.0027	19	c.-5+ others(34): Show c.-5+7715_-5+7733dupCCAGTGGATATAATTGGAT		LCLAT1	ENSG00000172954.14	transcript	ENST00000379509.8	protein_coding	1/5					INFO_REALIGN_3_PRIME	chr2	TogoVar
LCMT1_chr16_25106742_25183228	25179975	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01175.hp2 HG02145.hp1 HG02257.hp1 others(5): Show HG01175.hp2 HG02145.hp1 HG02257.hp1 HG02886.hp1 HG03098.hp2 NA18963.hp1 NA18993.hp2 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0110 a0001c0001t0001g0196 a0001c0001t0001g0197 others(5): Show a0001c0001t0001g0110 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0207 a0001c0001t0001g0279 a0001c0001t0001g0303 a0001c0001t0001g0308 a0001c0001t0003g0210	8	348	0.0230	19	c.19 others(30): Show c.1952_*1953insAAAAAAAAAAAAAAAAAAA		LCMT1	ENSG00000205629.12	transcript	ENST00000399069.8	protein_coding					1748		chr16	TogoVar
LCMT2_chr15_43318649_43335573	43334633	T T	TATATATA others(12): Show TATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01934.hp1 HG01934.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0000 a0001c0001t0002g0000	1	410	0.0024	19	c.-41 others(30): Show c.-4145_-4144insTATATATATATATATATAT		LCMT2	ENSG00000168806.8	transcript	ENST00000305641.7	protein_coding					4061		chr15	TogoVar
LCMT2_chr15_43318649_43335573	43334664	T T	TATATATA others(12): Show TATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19057.hp2 NA19057.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0000 a0001c0001t0026g0000	1	410	0.0024	19	c.-41 others(30): Show c.-4176_-4175insTATATATATATATATATAT		LCMT2	ENSG00000168806.8	transcript	ENST00000305641.7	protein_coding					4092		chr15	TogoVar
LCN15_chr9_136754634_136769518	136760302	C C	CAGCGGGG others(12): Show CAGCGGGGTTGTGCAGGGAG	intron_variant intron_variant	MODIFIER	NA19078.hp2 NA19078.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0062 a0001c0001t0001g0062	1	356	0.0028	19	c.33 others(34): Show c.33-520_*33-519insCTCCCTGCACAACCCCGCT		LCN15	ENSG00000177984.7	transcript	ENST00000316144.6	protein_coding	6/6						chr9	TogoVar
LCN15_chr9_136754634_136769518	136769194	A A	ACCCCCCC others(12): Show ACCCCCCCATGCACTGCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00323.hp2 HG00639.hp1 others(1): Show HG00280.hp1 HG00323.hp2 HG00639.hp1 HG01255.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0002 a0002c0002t0001g0002	4	356	0.0112	19	c.-47 others(30): Show c.-4707_-4706insGGGGCAGTGCATGGGGGGG		LCN15	ENSG00000177984.7	transcript	ENST00000316144.6	protein_coding					4677		chr9	TogoVar
LCN15_chr9_136754634_136769518	136769285	C C	CGCCACCC others(12): Show CGCCACCCCTCCATGCACTG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18981.hp1 NA18981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	356	0.0028	19	c.-47 others(30): Show c.-4798_-4797insCAGTGCATGGAGGGGTGGC		LCN15	ENSG00000177984.7	transcript	ENST00000316144.6	protein_coding					4768		chr9	TogoVar
LCN15_chr9_136754634_136769518	136769290	A A	ACCCCCCC others(12): Show ACCCCCCCATGCACTGCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01081.hp1 HG01934.hp2 HG01081.hp1 HG01934.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0066 a0001c0001t0001g0019 a0001c0001t0001g0066	2	356	0.0056	19	c.-48 others(30): Show c.-4803_-4802insGGGGCAGTGCATGGGGGGG		LCN15	ENSG00000177984.7	transcript	ENST00000316144.6	protein_coding					4773		chr9	TogoVar
LCN15_chr9_136754634_136769518	136769290	A A	ACCCCTCC others(12): Show ACCCCTCCATGCACTGCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01975.hp1 HG01975.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	356	0.0028	19	c.-48 others(30): Show c.-4803_-4802insGGGGCAGTGCATGGAGGGG		LCN15	ENSG00000177984.7	transcript	ENST00000316144.6	protein_coding					4773		chr9	TogoVar
LCN15_chr9_136754634_136769518	136769349	A A	ACCCCTCC others(12): Show ACCCCTCCATGCACTGCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00609.hp1 HG01952.hp1 HG01975.hp1 others(2): Show HG00609.hp1 HG01952.hp1 HG01975.hp1 NA18957.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0018 others(1): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0018 a0001c0001t0001g0019	5	356	0.0140	19	c.-48 others(30): Show c.-4862_-4861insGGGGCAGTGCATGGAGGGG		LCN15	ENSG00000177984.7	transcript	ENST00000316144.6	protein_coding					4832		chr9	TogoVar
LCN15_chr9_136754634_136769518	136769409	A A	ACCCCCCC others(12): Show ACCCCCCCATGCACTGCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18612.hp2 NA18612.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	356	0.0028	19	c.-49 others(30): Show c.-4922_-4921insGGGGCAGTGCATGGGGGGG		LCN15	ENSG00000177984.7	transcript	ENST00000316144.6	protein_coding					4892		chr9	TogoVar
LCN15_chr9_136754634_136769518	136769409	A A	ACCCCTCC others(12): Show ACCCCTCCATGCACTGCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01952.hp1 HG01975.hp1 HG03017.hp2 HG01952.hp1 HG01975.hp1 HG03017.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0018 a0001c0001t0001g0046 a0001c0001t0001g0003 a0001c0001t0001g0018 a0001c0001t0001g0046	3	356	0.0084	19	c.-49 others(30): Show c.-4922_-4921insGGGGCAGTGCATGGAGGGG		LCN15	ENSG00000177984.7	transcript	ENST00000316144.6	protein_coding					4892		chr9	TogoVar
LCN15_chr9_136754634_136769518	136769443	A A	ACCCCCCC others(12): Show ACCCCCCCATGCACTGCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00609.hp1 HG00609.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0019	1	356	0.0028	19	c.-49 others(30): Show c.-4956_-4955insGGGGCAGTGCATGGGGGGG		LCN15	ENSG00000177984.7	transcript	ENST00000316144.6	protein_coding					4926		chr9	TogoVar
LCN15_chr9_136754634_136769518	136769443	A A	ACCCCTCC others(12): Show ACCCCTCCATGCACTGCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01975.hp1 NA18612.hp2 HG01975.hp1 NA18612.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	2	356	0.0056	19	c.-49 others(30): Show c.-4956_-4955insGGGGCAGTGCATGGAGGGG		LCN15	ENSG00000177984.7	transcript	ENST00000316144.6	protein_coding					4926		chr9	TogoVar
LCN15_chr9_136754634_136769518	136769477	A A	ACCCCTCC others(12): Show ACCCCTCCATGCACTGCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00609.hp1 NA18612.hp2 HG00609.hp1 NA18612.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0019 a0001c0001t0001g0003 a0001c0001t0001g0019	2	356	0.0056	19	c.-49 others(30): Show c.-4990_-4989insGGGGCAGTGCATGGAGGGG		LCN15	ENSG00000177984.7	transcript	ENST00000316144.6	protein_coding					4960		chr9	TogoVar
LCN15_chr9_136754634_136769518	136769510	A A	ACCCCTCC others(12): Show ACCCCTCCATGCACTGCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00609.hp1 HG00609.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0019	1	356	0.0028	19	c.-50 others(30): Show c.-5023_-5022insGGGGCAGTGCATGGAGGGG		LCN15	ENSG00000177984.7	transcript	ENST00000316144.6	protein_coding					4993		chr9	TogoVar
LCN2_chr9_128144453_128158453	128147066	C C	CACTCTAT others(12): Show CACTCTATCATCCAGGCTGG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19001.hp1 NA19001.hp1	a0009 a0009	a0009c0005 a0009c0005	a0009c0005t0001 a0009c0005t0001	a0009c0005t0001g0002 a0009c0005t0001g0002	1	412	0.0024	19	c.-24 others(30): Show c.-2460_-2459insACTCTATCATCCAGGCTGG		LCN2	ENSG00000148346.12	transcript	ENST00000277480.7	protein_coding					2386		chr9	TogoVar
LCNL1_chr9_136977993_136990758	136984956	C C	CGGCCCCT others(12): Show CGGCCCCTCCCTGCCCCTCT	frameshift_variant frameshift_variant	HIGH	HG01074.hp2 HG01109.hp2 HG02559.hp2 others(7): Show HG01074.hp2 HG01109.hp2 HG02559.hp2 HG02572.hp2 HG02886.hp1 HG02976.hp2 HG03139.hp1 HG03225.hp2 HG03453.hp1 HG03486.hp1	a0003 a0004 a0003 a0004	a0003c0004 a0004c0003 a0003c0004 a0004c0003	a0003c0004t0001 a0003c0004t0015 a0004c0003t0001 a0003c0004t0001 a0003c0004t0015 a0004c0003t0001	a0003c0004t0001g0003 a0003c0004t0001g0014 a0003c0004t0015g0003 others(2): Show a0003c0004t0001g0003 a0003c0004t0001g0014 a0003c0004t0015g0003 a0004c0003t0001g0003 a0004c0003t0001g0008	10	382	0.0262	19	c.441 others(26): Show c.441_459dupGGCCCCTCCCTGCCCCTCT	p.Leu others(5): Show p.Leu154fs	LCNL1	ENSG00000214402.7	transcript	ENST00000408973.3	protein_coding	3/3	1054/1836	460/495	154/164		INFO_REALIGN_3_PRIME	chr9	TogoVar
LCORL_chr4_17836187_18026755	17999191	A A	AGCCGGGT others(12): Show AGCCGGGTGCGGTGGCTCAC	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00423.hp2 HG00438.hp1 others(287): Show HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01258.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02257.hp1 HG02257.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18946.hp1 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18959.hp1 NA18959.hp2 NA18961.hp1 NA18961.hp2 NA18964.hp1 NA18964.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18981.hp1 NA18981.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19062.hp1 NA19062.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19072.hp1 NA19072.hp2 NA19076.hp1 NA19076.hp2 NA19078.hp1 NA19078.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(20): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0010 a0011 a0012 a0013 a0014 a0015 a0016 a0017 a0018 a0019 a0020 a0021 a0022 a0023	a0001c0001 a0001c0003 a0001c0026 others(27): Show a0001c0001 a0001c0003 a0001c0026 a0002c0002 a0002c0023 a0002c0027 a0003c0004 a0004c0005 a0004c0020 a0004c0024 a0005c0006 a0006c0007 a0007c0010 a0008c0008 a0009c0009 a0010c0015 a0011c0013 a0012c0012 a0013c0028 a0013c0029 a0014c0011 a0015c0014 a0016c0021 a0017c0018 a0018c0022 a0019c0030 a0020c0019 a0021c0017 a0022c0016 a0023c0025	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(68): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0001t0021 a0001c0001t0023 a0001c0001t0024 a0001c0001t0027 a0001c0001t0029 a0001c0001t0036 a0001c0001t0040 a0001c0001t0041 a0001c0003t0001 a0001c0003t0003 a0001c0003t0022 a0001c0003t0025 a0001c0026t0026 a0002c0002t0001 a0002c0002t0002 a0002c0002t0005 a0002c0002t0012 a0002c0002t0014 a0002c0002t0020 a0002c0002t0021 a0002c0002t0033 a0002c0002t0034 a0002c0002t0035 a0002c0002t0037 a0002c0002t0038 a0002c0002t0039 a0002c0023t0002 a0002c0027t0005 a0003c0004t0002 a0003c0004t0004 a0003c0004t0010 a0004c0005t0004 a0004c0005t0008 a0004c0005t0010 a0004c0005t0030 a0004c0005t0031 a0004c0020t0032 a0004c0024t0013 a0005c0006t0005 a0005c0006t0011 a0006c0007t0006 a0007c0010t0001 a0008c0008t0013 a0009c0009t0001 a0010c0015t0003 a0011c0013t0002 a0012c0012t0003 a0013c0028t0001 a0013c0029t0001 a0014c0011t0004 a0015c0014t0015 a0016c0021t0004 a0017c0018t0028 a0018c0022t0016 a0019c0030t0006 a0020c0019t0010 a0021c0017t0006 a0022c0016t0004 a0023c0025t0012	a0001c0001t0001g0001 a0001c0001t0001g0059 a0001c0001t0001g0068 others(285): Show a0001c0001t0001g0001 a0001c0001t0001g0059 a0001c0001t0001g0068 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0188 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0002g0025 a0001c0001t0002g0046 a0001c0001t0002g0049 a0001c0001t0002g0065 a0001c0001t0002g0157 a0001c0001t0005g0114 a0001c0001t0006g0120 a0001c0001t0006g0121 a0001c0001t0007g0010 a0001c0001t0007g0011 a0001c0001t0007g0012 a0001c0001t0007g0014 a0001c0001t0007g0016 a0001c0001t0007g0017 a0001c0001t0007g0018 a0001c0001t0007g0021 a0001c0001t0009g0129 a0001c0001t0009g0139 a0001c0001t0009g0143 a0001c0001t0009g0164 a0001c0001t0009g0166 a0001c0001t0009g0173 a0001c0001t0010g0226 a0001c0001t0010g0228 a0001c0001t0012g0062 a0001c0001t0016g0140 a0001c0001t0017g0198 a0001c0001t0017g0199 a0001c0001t0018g0174 a0001c0001t0018g0175 a0001c0001t0019g0133 a0001c0001t0019g0204 a0001c0001t0021g0225 a0001c0001t0023g0007 a0001c0001t0024g0156 a0001c0001t0027g0142 a0001c0001t0029g0232 a0001c0001t0036g0075 a0001c0001t0040g0224 a0001c0001t0041g0152 a0001c0003t0001g0239 a0001c0003t0003g0214 a0001c0003t0003g0215 a0001c0003t0003g0216 a0001c0003t0003g0233 a0001c0003t0003g0234 a0001c0003t0003g0236 a0001c0003t0003g0237 a0001c0003t0003g0238 a0001c0003t0003g0240 a0001c0003t0003g0241 a0001c0003t0003g0244 a0001c0003t0003g0245 a0001c0003t0003g0246 a0001c0003t0003g0247 a0001c0003t0003g0249 a0001c0003t0003g0251 a0001c0003t0003g0252 a0001c0003t0003g0253 a0001c0003t0003g0254 a0001c0003t0003g0255 a0001c0003t0003g0256 a0001c0003t0003g0257 a0001c0003t0003g0258 a0001c0003t0003g0260 a0001c0003t0003g0261 a0001c0003t0003g0262 a0001c0003t0003g0263 a0001c0003t0003g0265 a0001c0003t0003g0266 a0001c0003t0003g0268 a0001c0003t0003g0269 a0001c0003t0003g0270 a0001c0003t0003g0271 a0001c0003t0022g0243 a0001c0003t0025g0264 a0001c0026t0026g0205 a0002c0002t0001g0085 a0002c0002t0002g0004 a0002c0002t0002g0006 a0002c0002t0002g0009 a0002c0002t0002g0019 a0002c0002t0002g0022 a0002c0002t0002g0023 a0002c0002t0002g0024 a0002c0002t0002g0026 a0002c0002t0002g0027 a0002c0002t0002g0028 a0002c0002t0002g0029 a0002c0002t0002g0030 a0002c0002t0002g0031 a0002c0002t0002g0032 a0002c0002t0002g0033 a0002c0002t0002g0034 a0002c0002t0002g0036 a0002c0002t0002g0037 a0002c0002t0002g0038 a0002c0002t0002g0039 a0002c0002t0002g0041 a0002c0002t0002g0042 a0002c0002t0002g0043 a0002c0002t0002g0044 a0002c0002t0002g0045 a0002c0002t0002g0047 a0002c0002t0002g0048 a0002c0002t0002g0050 a0002c0002t0002g0053 a0002c0002t0002g0054 a0002c0002t0002g0055 a0002c0002t0002g0056 a0002c0002t0002g0060 a0002c0002t0002g0061 a0002c0002t0002g0063 a0002c0002t0002g0064 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0072 a0002c0002t0002g0076 a0002c0002t0002g0077 a0002c0002t0002g0078 a0002c0002t0002g0079 a0002c0002t0002g0080 a0002c0002t0002g0081 a0002c0002t0002g0083 a0002c0002t0002g0084 a0002c0002t0002g0086 a0002c0002t0002g0087 a0002c0002t0002g0141 a0002c0002t0002g0165 a0002c0002t0005g0111 a0002c0002t0005g0112 a0002c0002t0005g0113 a0002c0002t0005g0116 a0002c0002t0005g0117 a0002c0002t0005g0118 a0002c0002t0005g0209 a0002c0002t0005g0210 a0002c0002t0012g0035 a0002c0002t0012g0051 a0002c0002t0012g0058 a0002c0002t0014g0211 a0002c0002t0014g0212 a0002c0002t0014g0213 a0002c0002t0020g0275 a0002c0002t0020g0276 a0002c0002t0021g0008 a0002c0002t0033g0070 a0002c0002t0034g0015 a0002c0002t0035g0040 a0002c0002t0037g0052 a0002c0002t0038g0013 a0002c0002t0039g0057 a0002c0023t0002g0005 a0002c0027t0005g0115 a0003c0004t0002g0109 a0003c0004t0004g0094 a0003c0004t0004g0096 a0003c0004t0004g0097 a0003c0004t0004g0098 a0003c0004t0004g0099 a0003c0004t0004g0101 a0003c0004t0004g0103 a0003c0004t0004g0104 a0003c0004t0004g0105 a0003c0004t0004g0106 a0003c0004t0004g0107 a0003c0004t0004g0108 a0003c0004t0004g0110 a0003c0004t0004g0119 a0003c0004t0004g0127 a0003c0004t0010g0100 a0003c0004t0010g0102 a0004c0005t0004g0220 a0004c0005t0008g0280 a0004c0005t0008g0281 a0004c0005t0008g0282 a0004c0005t0008g0283 a0004c0005t0008g0286 a0004c0005t0008g0287 a0004c0005t0008g0288 a0004c0005t0008g0289 a0004c0005t0010g0227 a0004c0005t0030g0290 a0004c0005t0031g0284 a0004c0020t0032g0279 a0004c0024t0013g0088 a0005c0006t0005g0231 a0005c0006t0011g0208 a0005c0006t0011g0222 a0005c0006t0011g0223 a0005c0006t0011g0229 a0005c0006t0011g0230 a0006c0007t0006g0250 a0006c0007t0006g0272 a0006c0007t0006g0274 a0006c0007t0006g0277 a0006c0007t0006g0278 a0007c0010t0001g0189 a0007c0010t0001g0190 a0007c0010t0001g0197 a0008c0008t0013g0217 a0008c0008t0013g0218 a0008c0008t0013g0219 a0009c0009t0001g0178 a0009c0009t0001g0186 a0009c0009t0001g0187 a0010c0015t0003g0235 a0010c0015t0003g0242 a0011c0013t0002g0073 a0011c0013t0002g0074 a0012c0012t0003g0002 a0013c0028t0001g0161 a0013c0029t0001g0137 a0014c0011t0004g0092 a0014c0011t0004g0093 a0015c0014t0015g0248 a0015c0014t0015g0259 a0016c0021t0004g0095 a0017c0018t0028g0003 a0018c0022t0016g0138 a0019c0030t0006g0285 a0020c0019t0010g0221 a0021c0017t0006g0273 a0022c0016t0004g0091 a0023c0025t0012g0082	290	292	0.9932	19	c.154 others(38): Show c.154+22406_154+22407insGTGAGCCACCGCACCCGGC		LCORL	ENSG00000178177.17	transcript	ENST00000635767.2	protein_coding	1/7						chr4	TogoVar
LCORL_chr4_17836187_18026755	17999191	A A	AGCCGGGT others(12): Show AGCCGGGTGTGGTGGCTCAC	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02056.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0267 a0001c0003t0003g0267	1	292	0.0034	19	c.154 others(38): Show c.154+22406_154+22407insGTGAGCCACCACACCCGGC		LCORL	ENSG00000178177.17	transcript	ENST00000635767.2	protein_coding	1/7						chr4	TogoVar
LCOR_chr10_96827298_97000956	96970653	A A	ATTTATTT others(12): Show ATTTATTTTATTTTATTTAT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0008 a0008	a0008c0013 a0008c0013	a0008c0013t0080 a0008c0013t0080	a0008c0013t0080g0174 a0008c0013t0080g0174	1	288	0.0035	19	c.333 others(38): Show c.333-10123_333-10122insATTTTATTTTATTTTATTT		LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	7/7					INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96989695	A A	ATATATAT others(12): Show ATATATATATATATATATTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0050 a0004c0005t0050	a0004c0005t0050g0173 a0004c0005t0050g0173	1	288	0.0035	19	c.45 others(30): Show c.4562_*4563insATATATATATATATATTTT		LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	8/8				4563	INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96989696	T T	TATATATA others(12): Show TATATATATATATATATATA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02486.hp1 HG03195.hp2 HG03453.hp1 HG02486.hp1 HG03195.hp2 HG03453.hp1	a0004 a0004	a0004c0005 a0004c0009 a0004c0005 a0004c0009	a0004c0005t0021 a0004c0005t0046 a0004c0009t0021 a0004c0005t0021 a0004c0005t0046 a0004c0009t0021	a0004c0005t0021g0171 a0004c0005t0046g0125 a0004c0009t0021g0187 a0004c0005t0021g0171 a0004c0005t0046g0125 a0004c0009t0021g0187	3	288	0.0104	19	c.45 others(30): Show c.4562_*4563insATATATATATATATATATA		LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	8/8				4563		chr10	TogoVar
LCTL_chr15_66542532_66570998	66544724	T T	TGTGTGTG others(12): Show TGTGTGTGTGTGTGTGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19062.hp2 NA19062.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0189 a0001c0001t0001g0189	1	434	0.0023	19	c.37 others(30): Show c.3765_*3766insCACACACACACACACACAC		LCTL	ENSG00000188501.12	transcript	ENST00000695545.1	protein_coding					2807		chr15	TogoVar
LCTL_chr15_66542532_66570998	66544759	T T	TGTGTGTG others(12): Show TGTGTGTGTGTGTGTGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02056.hp1 HG02056.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	434	0.0023	19	c.37 others(30): Show c.3730_*3731insCACACACACACACACACAC		LCTL	ENSG00000188501.12	transcript	ENST00000695545.1	protein_coding					2772		chr15	TogoVar
LDB2_chr4_16496541_16903645	16739589	A A	AAAAAAAT others(12): Show AAAAAAATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0012	1	162	0.0062	19	c.235 others(38): Show c.235+19568_235+19569insATATATATATATATTTTTT		LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	2/7						chr4	TogoVar
LDHAL6A_chr11_18450856_18484601	18464977	G G	GTTTGTTT others(12): Show GTTTGTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0070 a0001c0001t0070	a0001c0001t0070g0311 a0001c0001t0070g0311	1	420	0.0024	19	c.245 others(34): Show c.245-657_245-656insGTTTTTTTTTTTTTTTTTT		LDHAL6A	ENSG00000166800.11	transcript	ENST00000280706.3	protein_coding	2/6					INFO_REALIGN_3_PRIME	chr11	TogoVar
LDHA_chr11_18389563_18413425	18401955	C C	CTCTCTTT others(12): Show CTCTCTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00323.hp2 HG00423.hp2 others(28): Show HG00280.hp2 HG00323.hp2 HG00423.hp2 HG00544.hp1 HG00597.hp1 HG00738.hp2 HG01070.hp2 HG01081.hp2 HG01109.hp2 HG01169.hp2 HG01257.hp1 HG01361.hp1 HG01496.hp2 HG02004.hp2 HG02129.hp1 HG02155.hp1 HG02683.hp1 HG02735.hp1 HG02735.hp2 HG03492.hp1 HG04184.hp2 NA18939.hp2 NA18943.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18967.hp1 NA18967.hp2 NA18990.hp1 NA19057.hp1 NA19057.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0003 a0001c0001t0001g0044 a0001c0001t0001g0058 others(16): Show a0001c0001t0001g0003 a0001c0001t0001g0044 a0001c0001t0001g0058 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0130 a0001c0001t0001g0137 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0180 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0226 a0001c0001t0006g0003 a0001c0001t0006g0171 a0001c0001t0006g0181	31	390	0.0795	19	c.419 others(34): Show c.419-884_419-883insCTCTTTTTTTTTTTTTTTT		LDHA	ENSG00000134333.15	transcript	ENST00000422447.8	protein_coding	4/7					INFO_REALIGN_3_PRIME	chr11	TogoVar
LDLRAD2_chr1_21807265_21830225	21816179	A A	ACTTTTCT others(12): Show ACTTTTCTTTCTTTCTTTTT	intron_variant intron_variant	MODIFIER	NA18939.hp2 NA18939.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0034 a0001c0001t0034	a0001c0001t0034g0117 a0001c0001t0034g0117	1	454	0.0022	19	c.643 others(34): Show c.643+105_643+106insCTTTTCTTTCTTTCTTTTT		LDLRAD2	ENSG00000187942.12	transcript	ENST00000344642.7	protein_coding	3/4						chr1	TogoVar
LDLRAD3_chr11_35939062_36237136	35991867	T T	TGTGTGTG others(12): Show TGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0004 a0002c0003t0004	a0002c0003t0004g0236 a0002c0003t0004g0236	1	236	0.0042	19	c.47- others(36): Show c.47-44236_47-44235insGTGTGTGTGTGTGTGTGTG		LDLRAD3	ENSG00000179241.13	transcript	ENST00000315571.6	protein_coding	1/5						chr11	TogoVar
LDLRAD3_chr11_35939062_36237136	36095386	T T	TGTGGTAA others(12): Show TGTGGTAAGCCTTATCCATA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00642.hp1 HG01070.hp1 others(36): Show HG00099.hp2 HG00642.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01167.hp2 HG01175.hp2 HG01256.hp1 HG01361.hp2 HG01934.hp2 HG01952.hp1 HG01952.hp2 HG01993.hp2 HG02004.hp1 HG02055.hp1 HG02056.hp2 HG02129.hp2 HG02155.hp2 HG02165.hp1 HG02258.hp2 HG02572.hp2 HG02683.hp2 HG02735.hp1 HG02886.hp2 HG03017.hp1 HG03239.hp1 HG03492.hp2 HG03688.hp1 HG03688.hp2 HG03834.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp2 HG04204.hp1 NA18522.hp2 NA18951.hp2 NA19012.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0002c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0007 a0001c0001t0011 a0001c0002t0001 a0001c0002t0002 a0001c0002t0022 a0002c0003t0002 a0002c0004t0004	a0001c0001t0001g0005 a0001c0001t0001g0037 a0001c0001t0001g0085 others(36): Show a0001c0001t0001g0005 a0001c0001t0001g0037 a0001c0001t0001g0085 a0001c0001t0001g0100 a0001c0001t0001g0117 a0001c0001t0001g0123 a0001c0001t0001g0126 a0001c0001t0001g0140 a0001c0001t0001g0142 a0001c0001t0001g0151 a0001c0001t0001g0154 a0001c0001t0001g0173 a0001c0001t0001g0222 a0001c0001t0002g0062 a0001c0001t0002g0104 a0001c0001t0002g0124 a0001c0001t0002g0131 a0001c0001t0002g0171 a0001c0001t0002g0195 a0001c0001t0002g0213 a0001c0001t0003g0051 a0001c0001t0003g0190 a0001c0001t0003g0194 a0001c0001t0006g0014 a0001c0001t0007g0018 a0001c0001t0011g0036 a0001c0002t0001g0021 a0001c0002t0001g0090 a0001c0002t0001g0099 a0001c0002t0001g0147 a0001c0002t0001g0152 a0001c0002t0001g0163 a0001c0002t0001g0193 a0001c0002t0001g0212 a0001c0002t0002g0134 a0001c0002t0002g0217 a0001c0002t0022g0101 a0002c0003t0002g0225 a0002c0004t0004g0231	39	236	0.1653	19	c.320 others(36): Show c.320-2937_320-2936insTAAGCCTTATCCATAGTGG		LDLRAD3	ENSG00000179241.13	transcript	ENST00000315571.6	protein_coding	3/5					INFO_REALIGN_3_PRIME	chr11	TogoVar
LDLRAD3_chr11_35939062_36237136	36140992	T T	TCTCTCTC others(12): Show TCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG02004.hp1 HG02004.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0117 a0001c0001t0001g0117	1	236	0.0042	19	c.454 others(38): Show c.454+42531_454+42532insCTCTCTCTCTCTCTCTCTC		LDLRAD3	ENSG00000179241.13	transcript	ENST00000315571.6	protein_coding	4/5						chr11	TogoVar
LDLRAD4_chr18_13213760_13657751	13226180	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0046 a0001c0001t0046	a0001c0001t0046g0078 a0001c0001t0046g0078	1	178	0.0056	19	c.-46 others(38): Show c.-467+7195_-467+7213dupTTTTTTTTTTTTTTTTTTT		LDLRAD4	ENSG00000168675.19	transcript	ENST00000359446.11	protein_coding	1/6					INFO_REALIGN_3_PRIME	chr18	TogoVar
LDLRAD4_chr18_13213760_13657751	13586406	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00609.hp1 HG01516.hp1 others(10): Show HG00558.hp2 HG00609.hp1 HG01516.hp1 HG01891.hp2 HG03130.hp2 HG03942.hp1 NA18949.hp1 NA18971.hp1 NA18980.hp1 NA18998.hp2 NA19010.hp2 NA19057.hp1 NA19060.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 a0001c0001t0012 a0001c0001t0015 a0003c0004t0021	a0001c0001t0001g0014 a0001c0001t0001g0134 a0001c0001t0001g0167 others(10): Show a0001c0001t0001g0014 a0001c0001t0001g0134 a0001c0001t0001g0167 a0001c0001t0002g0036 a0001c0001t0002g0061 a0001c0001t0002g0151 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0009g0007 a0001c0001t0012g0028 a0001c0001t0015g0071 a0003c0004t0021g0035	13	178	0.0730	19	c.182 others(38): Show c.182-34696_182-34695insAAAAAAAAAAAAAAAAAAA		LDLRAD4	ENSG00000168675.19	transcript	ENST00000359446.11	protein_coding	4/6					INFO_REALIGN_3_PRIME	chr18	TogoVar
LDLR_chr19_11084463_11138820	11122395	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0018 a0001c0018	a0001c0018t0024 a0001c0018t0024	a0001c0018t0024g0047 a0001c0018t0024g0047	1	358	0.0028	19	c.214 others(36): Show c.2141-775_2141-757dupTTTTTTTTTTTTTTTTTTT		LDLR	ENSG00000130164.15	transcript	ENST00000558518.6	protein_coding	14/17					INFO_REALIGN_3_PRIME	chr19	TogoVar
LEF1_chr4_108042548_108173932	108132659	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0159 a0001c0001t0001g0159	1	264	0.0038	19	c.414 others(38): Show c.414+30890_414+30908dupAAAAAAAAAAAAAAAAAAA		LEF1	ENSG00000138795.10	transcript	ENST00000265165.6	protein_coding	3/11						chr4	TogoVar
LEF1_chr4_108042548_108173932	108149458	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02897.hp1 NA20129.hp1 others(1): Show HG02896.hp1 HG02897.hp1 NA20129.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0010 a0001c0001t0003 a0001c0001t0010	a0001c0001t0003g0249 a0001c0001t0010g0002 a0001c0001t0010g0003 others(1): Show a0001c0001t0003g0249 a0001c0001t0010g0002 a0001c0001t0010g0003 a0001c0001t0010g0004	4	264	0.0152	19	c.414 others(38): Show c.414+14109_414+14110insTTTTTTTTTTTTTTTTTTT		LEF1	ENSG00000138795.10	transcript	ENST00000265165.6	protein_coding	3/11						chr4	TogoVar
LENEP_chr1_154988586_154999315	154991223	A A	ATATATAT others(12): Show ATATATATATATATATATGT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19004.hp1 NA19004.hp2 NA19004.hp1 NA19004.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	2	308	0.0065	19	c.-23 others(30): Show c.-2385_-2384insTATATATATATATATATGT		LENEP	ENSG00000163352.6	transcript	ENST00000392487.2	protein_coding					2362		chr1	TogoVar
LEO1_chr15_51933025_51976778	51934711	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00673.hp1 HG00673.hp2 HG01261.hp1 others(8): Show HG00673.hp1 HG00673.hp2 HG01261.hp1 HG02004.hp2 HG02300.hp2 HG02523.hp2 HG02559.hp2 HG03579.hp1 NA18940.hp2 NA18950.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0039 a0001c0001t0001g0199 a0001c0001t0001g0203 others(8): Show a0001c0001t0001g0039 a0001c0001t0001g0199 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0206 a0001c0001t0001g0208 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0260 a0001c0001t0001g0283 a0001c0001t0001g0284	11	388	0.0284	19	c.34 others(30): Show c.3426_*3444dupTTTTTTTTTTTTTTTTTTT		LEO1	ENSG00000166477.13	transcript	ENST00000299601.10	protein_coding					3313		chr15	TogoVar
LEPR_chr1_65415668_65646559	65598095	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG03453.hp2 HG02145.hp1 HG03453.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0005 a0002c0002t0001 a0002c0002t0005	a0002c0002t0001g0104 a0002c0002t0005g0188 a0002c0002t0001g0104 a0002c0002t0005g0188	2	216	0.0093	19	c.850 others(34): Show c.850-563_850-545dupTTTTTTTTTTTTTTTTTTT		LEPR	ENSG00000116678.20	transcript	ENST00000349533.11	protein_coding	7/19					INFO_REALIGN_3_PRIME	chr1	TogoVar
LFNG_chr7_2514774_2533429	2531235	G G	GCTTCTGA others(12): Show GCTTCTGAGCCCAGCCCCAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(347): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00673.hp1 HG00673.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02080.hp1 HG02080.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp2 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp2 HG04184.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18942.hp1 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp2 NA18956.hp1 NA18960.hp1 NA18960.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18967.hp1 NA18967.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18979.hp1 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18990.hp1 NA18990.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19055.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19059.hp2 NA19060.hp1 NA19064.hp1 NA19064.hp2 NA19066.hp2 NA19067.hp1 NA19068.hp1 NA19068.hp2 NA19070.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20805.hp2 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0007	a0001c0001 a0001c0002 a0001c0003 others(7): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0007 a0002c0010 a0003c0011 a0004c0008 a0005c0005 a0007c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(23): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0001t0015 a0001c0001t0016 a0001c0001t0018 a0001c0002t0001 a0001c0002t0011 a0001c0003t0003 a0001c0004t0002 a0001c0004t0006 a0001c0007t0001 a0002c0010t0001 a0003c0011t0001 a0004c0008t0001 a0005c0005t0002 a0007c0006t0002	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(121): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0041 a0001c0001t0001g0047 a0001c0001t0001g0050 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0061 a0001c0001t0001g0063 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0081 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0099 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0002g0001 a0001c0001t0002g0002 a0001c0001t0002g0006 a0001c0001t0002g0015 a0001c0001t0002g0017 a0001c0001t0002g0025 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0057 a0001c0001t0002g0074 a0001c0001t0002g0078 a0001c0001t0002g0084 a0001c0001t0002g0087 a0001c0001t0002g0095 a0001c0001t0002g0097 a0001c0001t0003g0005 a0001c0001t0003g0037 a0001c0001t0003g0082 a0001c0001t0004g0004 a0001c0001t0004g0024 a0001c0001t0004g0029 a0001c0001t0004g0033 a0001c0001t0004g0036 a0001c0001t0004g0039 a0001c0001t0004g0069 a0001c0001t0004g0070 a0001c0001t0005g0004 a0001c0001t0006g0055 a0001c0001t0006g0073 a0001c0001t0007g0008 a0001c0001t0008g0044 a0001c0001t0009g0023 a0001c0001t0010g0004 a0001c0001t0012g0029 a0001c0001t0013g0002 a0001c0001t0015g0052 a0001c0001t0016g0001 a0001c0001t0018g0001 a0001c0002t0001g0001 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0004 a0001c0002t0001g0006 a0001c0002t0001g0007 a0001c0002t0001g0009 a0001c0002t0001g0012 a0001c0002t0001g0019 a0001c0002t0001g0025 a0001c0002t0001g0026 a0001c0002t0001g0034 a0001c0002t0001g0040 a0001c0002t0001g0043 a0001c0002t0001g0045 a0001c0002t0001g0066 a0001c0002t0001g0067 a0001c0002t0001g0068 a0001c0002t0001g0072 a0001c0002t0001g0083 a0001c0002t0001g0085 a0001c0002t0001g0086 a0001c0002t0001g0100 a0001c0002t0011g0064 a0001c0003t0003g0005 a0001c0003t0003g0051 a0001c0004t0002g0079 a0001c0004t0006g0080 a0001c0007t0001g0001 a0002c0010t0001g0001 a0003c0011t0001g0009 a0004c0008t0001g0001 a0005c0005t0002g0062 a0007c0006t0002g0025	350	414	0.8454	19	c.40 others(30): Show c.4023_*4024insCTTCTGAGCCCAGCCCCAC		LFNG	ENSG00000106003.14	transcript	ENST00000222725.10	protein_coding					2807		chr7	TogoVar
LGALS8_chr1_236518982_236557981	236538101	A A	AAAAAAAA others(12): Show AAAAAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp1 HG00544.hp2 others(4): Show HG00408.hp1 HG00423.hp1 HG00544.hp2 HG01346.hp1 HG01981.hp1 NA18979.hp2 NA19064.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0031 a0001c0001t0001 a0001c0001t0031	a0001c0001t0001g0037 a0001c0001t0001g0143 a0001c0001t0001g0152 others(3): Show a0001c0001t0001g0037 a0001c0001t0001g0143 a0001c0001t0001g0152 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0031g0156	7	450	0.0156	19	c.134 others(34): Show c.134+519_134+520insAAAAAAAAAAAAAAAGAAA		LGALS8	ENSG00000116977.19	transcript	ENST00000366584.9	protein_coding	3/9					INFO_REALIGN_3_PRIME	chr1	TogoVar
LGALS9B_chr17_20444395_20472539	20461207	A A	AGGTCTGA others(12): Show AGGTCTGAATCCTAACTCTG	intron_variant intron_variant	MODIFIER	NA18972.hp2 NA18972.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0146 a0001c0001t0001g0146	1	433	0.0023	19	c.40- others(32): Show c.40-783_40-765dupCAGAGTTAGGATTCAGACC		LGALS9B	ENSG00000170298.16	transcript	ENST00000423676.8	protein_coding	1/10						chr17	TogoVar
LGALSL_chr2_64449162_64466381	64454454	A A	ACCCGCGC others(12): Show ACCCGCGCCCCCGCCCCCGC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02738.hp2 HG03710.hp1 HG02738.hp2 HG03710.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0001 a0001c0001t0014g0001	2	422	0.0047	19	c.-84 others(26): Show c.-84_-66dupCCCCGCCCCCGCCCCGCGC		LGALSL	ENSG00000119862.13	transcript	ENST00000238875.10	protein_coding	1/5				65	INFO_REALIGN_3_PRIME	chr2	TogoVar
LGMN_chr14_92698809_92753627	92708856	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG03453.hp1 HG02572.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0370 a0001c0002t0002g0369 a0001c0001t0001g0370 a0001c0002t0002g0369	2	420	0.0048	19	c.102 others(36): Show c.1020+797_1020+815dupTTTTTTTTTTTTTTTTTTT		LGMN	ENSG00000100600.15	transcript	ENST00000334869.9	protein_coding	11/13						chr14	TogoVar
LGMN_chr14_92698809_92753627	92719323	G G	GCCGCCGC others(12): Show GCCGCCGCCGCCACCCGCCA	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0188 a0001c0001t0002g0188	1	420	0.0024	19	c.139 others(34): Show c.139-480_139-479insTGGCGGGTGGCGGCGGCGG		LGMN	ENSG00000100600.15	transcript	ENST00000334869.9	protein_coding	2/13						chr14	TogoVar

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