Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact

Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LOC400499_chr16_11367015_11532247	11515716	A A	AAGGAGGA others(12): Show AAGGAGGAGGAAAAGGGAGG	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00280.hp1 others(131): Show HG00099.hp1 HG00099.hp2 HG00280.hp1 HG00323.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01106.hp2 HG01109.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp2 HG01256.hp1 HG01257.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01496.hp1 HG01496.hp2 HG01516.hp1 HG01517.hp2 HG01884.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG01993.hp2 HG02083.hp1 HG02109.hp1 HG02132.hp2 HG02135.hp2 HG02258.hp2 HG02280.hp1 HG02293.hp2 HG02300.hp2 HG02451.hp1 HG02572.hp1 HG02602.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02723.hp1 HG02735.hp2 HG02738.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp2 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG03041.hp2 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03486.hp1 HG03490.hp2 HG03516.hp1 HG03540.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp2 HG03710.hp1 HG03927.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18747.hp1 NA18906.hp1 NA18944.hp2 NA18946.hp2 NA18947.hp2 NA18950.hp1 NA18950.hp2 NA18955.hp1 NA18956.hp2 NA18969.hp2 NA18975.hp2 NA18980.hp1 NA18984.hp1 NA18984.hp2 NA18985.hp2 NA18986.hp2 NA19002.hp1 NA19009.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19057.hp1 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19070.hp1 NA19070.hp2 NA19079.hp1 NA19081.hp2 NA19085.hp1 NA19085.hp2 NA19088.hp2 NA19090.hp2 NA19240.hp1 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0006 a0008 a0009 others(111): Show a0006 a0008 a0009 a0010 a0011 a0013 a0014 a0015 a0020 a0023 a0024 a0025 a0027 a0028 a0029 a0030 a0033 a0034 a0041 a0043 a0044 a0046 a0047 a0048 a0049 a0051 a0052 a0053 a0056 a0058 a0061 a0065 a0067 a0068 a0071 a0072 a0073 a0074 a0079 a0080 a0081 a0082 a0089 a0091 a0093 a0095 a0105 a0106 a0110 a0116 a0120 a0122 a0123 a0124 a0125 a0130 a0132 a0133 a0135 a0136 a0139 a0141 a0142 a0144 a0146 a0149 a0151 a0152 a0153 a0156 a0158 a0159 a0162 a0165 a0168 a0171 a0175 a0176 a0178 a0179 a0183 a0188 a0189 a0190 a0192 a0193 a0196 a0201 a0204 a0206 a0207 a0208 a0209 a0212 a0215 a0221 a0222 a0223 a0231 a0235 a0236 a0240 a0242 a0243 a0245 a0246 a0247 a0248 a0249 a0253 a0255 a0257 a0258 a0260	a0006c0005 a0006c0219 a0008c0006 others(116): Show a0006c0005 a0006c0219 a0008c0006 a0009c0007 a0010c0248 a0010c0249 a0011c0025 a0013c0018 a0014c0024 a0015c0020 a0020c0245 a0020c0246 a0023c0182 a0023c0183 a0024c0022 a0025c0019 a0027c0023 a0028c0026 a0029c0202 a0029c0203 a0030c0021 a0033c0168 a0034c0241 a0041c0239 a0043c0236 a0044c0220 a0046c0243 a0047c0235 a0048c0244 a0049c0258 a0051c0199 a0052c0171 a0053c0224 a0056c0223 a0058c0261 a0061c0250 a0065c0213 a0067c0264 a0068c0204 a0071c0252 a0072c0185 a0073c0170 a0074c0267 a0079c0238 a0080c0215 a0081c0251 a0082c0222 a0089c0210 a0091c0029 a0093c0191 a0095c0217 a0105c0268 a0106c0027 a0110c0179 a0116c0192 a0120c0214 a0122c0184 a0123c0201 a0124c0229 a0125c0269 a0130c0167 a0132c0265 a0133c0195 a0135c0189 a0136c0193 a0139c0176 a0141c0028 a0142c0266 a0144c0181 a0146c0177 a0149c0227 a0151c0187 a0152c0180 a0153c0272 a0156c0178 a0158c0232 a0159c0198 a0162c0228 a0165c0194 a0168c0242 a0171c0221 a0175c0172 a0176c0259 a0178c0260 a0179c0173 a0183c0169 a0188c0240 a0189c0237 a0190c0262 a0192c0271 a0193c0230 a0196c0188 a0201c0256 a0204c0218 a0206c0263 a0207c0270 a0208c0211 a0209c0209 a0212c0257 a0215c0205 a0221c0226 a0222c0207 a0223c0212 a0231c0254 a0235c0190 a0236c0174 a0240c0234 a0242c0208 a0243c0206 a0245c0216 a0246c0253 a0247c0233 a0248c0196 a0249c0186 a0253c0225 a0255c0255 a0257c0247 a0258c0200 a0260c0030	a0006c0005t0003 a0006c0219t0003 a0008c0006t0003 others(119): Show a0006c0005t0003 a0006c0219t0003 a0008c0006t0003 a0008c0006t0004 a0008c0006t0005 a0009c0007t0004 a0009c0007t0009 a0010c0248t0002 a0010c0249t0004 a0011c0025t0002 a0013c0018t0003 a0014c0024t0002 a0015c0020t0005 a0020c0245t0002 a0020c0246t0001 a0023c0182t0004 a0023c0183t0002 a0024c0022t0001 a0025c0019t0001 a0027c0023t0006 a0028c0026t0001 a0029c0202t0001 a0029c0203t0001 a0030c0021t0002 a0033c0168t0003 a0034c0241t0004 a0041c0239t0003 a0043c0236t0005 a0044c0220t0002 a0046c0243t0004 a0047c0235t0004 a0048c0244t0002 a0049c0258t0003 a0051c0199t0003 a0052c0171t0003 a0053c0224t0002 a0056c0223t0002 a0058c0261t0005 a0061c0250t0001 a0065c0213t0003 a0067c0264t0003 a0068c0204t0004 a0071c0252t0005 a0072c0185t0002 a0073c0170t0004 a0074c0267t0006 a0079c0238t0003 a0080c0215t0003 a0081c0251t0005 a0082c0222t0003 a0089c0210t0001 a0091c0029t0005 a0093c0191t0003 a0095c0217t0001 a0105c0268t0003 a0106c0027t0006 a0110c0179t0005 a0116c0192t0002 a0120c0214t0015 a0122c0184t0005 a0123c0201t0003 a0124c0229t0008 a0125c0269t0003 a0130c0167t0001 a0132c0265t0003 a0133c0195t0004 a0135c0189t0005 a0136c0193t0002 a0139c0176t0002 a0141c0028t0008 a0142c0266t0007 a0144c0181t0004 a0146c0177t0006 a0149c0227t0014 a0151c0187t0010 a0152c0180t0006 a0153c0272t0002 a0156c0178t0002 a0158c0232t0004 a0159c0198t0002 a0162c0228t0012 a0165c0194t0002 a0168c0242t0004 a0171c0221t0005 a0175c0172t0002 a0176c0259t0003 a0178c0260t0003 a0179c0173t0001 a0183c0169t0003 a0188c0240t0001 a0189c0237t0001 a0190c0262t0001 a0192c0271t0010 a0193c0230t0007 a0196c0188t0006 a0201c0256t0001 a0204c0218t0001 a0206c0263t0003 a0207c0270t0003 a0208c0211t0003 a0209c0209t0004 a0212c0257t0001 a0215c0205t0003 a0221c0226t0003 a0222c0207t0001 a0223c0212t0001 a0231c0254t0003 a0235c0190t0007 a0236c0174t0003 a0240c0234t0001 a0242c0208t0001 a0243c0206t0003 a0245c0216t0001 a0246c0253t0004 a0247c0233t0002 a0248c0196t0001 a0249c0186t0005 a0253c0225t0002 a0255c0255t0002 a0257c0247t0003 a0258c0200t0005 a0260c0030t0002	a0006c0005t0003g0086 a0006c0005t0003g0103 a0006c0005t0003g0188 others(131): Show a0006c0005t0003g0086 a0006c0005t0003g0103 a0006c0005t0003g0188 a0006c0219t0003g0179 a0008c0006t0003g0104 a0008c0006t0004g0109 a0008c0006t0005g0053 a0009c0007t0004g0022 a0009c0007t0004g0055 a0009c0007t0009g0096 a0010c0248t0002g0231 a0010c0249t0004g0102 a0011c0025t0002g0043 a0011c0025t0002g0099 a0013c0018t0003g0088 a0013c0018t0003g0089 a0014c0024t0002g0100 a0014c0024t0002g0101 a0015c0020t0005g0229 a0015c0020t0005g0230 a0020c0245t0002g0081 a0020c0246t0001g0105 a0023c0182t0004g0288 a0023c0183t0002g0168 a0024c0022t0001g0056 a0024c0022t0001g0222 a0025c0019t0001g0033 a0025c0019t0001g0163 a0027c0023t0006g0005 a0027c0023t0006g0006 a0028c0026t0001g0153 a0028c0026t0001g0155 a0029c0202t0001g0261 a0029c0203t0001g0232 a0030c0021t0002g0128 a0030c0021t0002g0246 a0033c0168t0003g0161 a0034c0241t0004g0130 a0041c0239t0003g0145 a0043c0236t0005g0069 a0044c0220t0002g0084 a0046c0243t0004g0071 a0047c0235t0004g0118 a0048c0244t0002g0119 a0049c0258t0003g0184 a0051c0199t0003g0185 a0052c0171t0003g0016 a0053c0224t0002g0131 a0056c0223t0002g0018 a0058c0261t0005g0117 a0061c0250t0001g0132 a0065c0213t0003g0083 a0067c0264t0003g0186 a0068c0204t0004g0266 a0071c0252t0005g0175 a0072c0185t0002g0051 a0073c0170t0004g0183 a0074c0267t0006g0165 a0079c0238t0003g0187 a0080c0215t0003g0108 a0081c0251t0005g0176 a0082c0222t0003g0147 a0089c0210t0001g0129 a0091c0029t0005g0294 a0093c0191t0003g0233 a0095c0217t0001g0107 a0105c0268t0003g0278 a0106c0027t0006g0285 a0110c0179t0005g0148 a0116c0192t0002g0031 a0120c0214t0015g0310 a0122c0184t0005g0044 a0123c0201t0003g0177 a0124c0229t0008g0283 a0125c0269t0003g0262 a0130c0167t0001g0080 a0132c0265t0003g0282 a0133c0195t0004g0059 a0135c0189t0005g0158 a0136c0193t0002g0141 a0139c0176t0002g0058 a0141c0028t0008g0303 a0142c0266t0007g0274 a0144c0181t0004g0286 a0146c0177t0006g0028 a0149c0227t0014g0308 a0151c0187t0010g0046 a0152c0180t0006g0287 a0153c0272t0002g0292 a0156c0178t0002g0017 a0158c0232t0004g0195 a0159c0198t0002g0162 a0162c0228t0012g0224 a0165c0194t0002g0300 a0168c0242t0004g0190 a0171c0221t0005g0275 a0175c0172t0002g0211 a0176c0259t0003g0181 a0178c0260t0003g0180 a0179c0173t0001g0212 a0183c0169t0003g0098 a0188c0240t0001g0085 a0189c0237t0001g0236 a0190c0262t0001g0138 a0192c0271t0010g0290 a0193c0230t0007g0225 a0196c0188t0006g0159 a0201c0256t0001g0273 a0204c0218t0001g0149 a0206c0263t0003g0124 a0207c0270t0003g0271 a0208c0211t0003g0226 a0209c0209t0004g0192 a0212c0257t0001g0272 a0215c0205t0003g0238 a0221c0226t0003g0259 a0222c0207t0001g0126 a0223c0212t0001g0127 a0231c0254t0003g0257 a0235c0190t0007g0026 a0236c0174t0003g0027 a0240c0234t0001g0106 a0242c0208t0001g0191 a0243c0206t0003g0082 a0245c0216t0001g0097 a0246c0253t0004g0264 a0247c0233t0002g0070 a0248c0196t0001g0150 a0249c0186t0005g0196 a0253c0225t0002g0021 a0255c0255t0002g0049 a0257c0247t0003g0284 a0258c0200t0005g0143 a0260c0030t0002g0112	134	310	0.4323	19	c.654 others(34): Show c.654+194_654+212dupCCTCCCTTTTCCTCCTCCT	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	6/66			chr16	TogoVar
LOC729966_chr19_18245034_18260362	18251680	C C	CCCCCCCG others(12): Show CCCCCCCGCCCCCGCCCCCG	intron_variant intron_variant	MODIFIER	NA18973.hp2 NA18973.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0082 a0003c0003t0001g0082	1	454	0.0022	19	c.496 others(34): Show c.496+365_496+383dupCGGGGGCGGGGGCGGGGGG	LOC729966	ENSG00000284797.2	transcript	ENST00000643046.2	protein_coding	2/3			chr19	TogoVar
LOC729966_chr19_18245034_18260362	18251681	C C	CCCCCCCG others(12): Show CCCCCCCGCCCCCGCCCCCG	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01261.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0067	1	454	0.0022	19	c.496 others(34): Show c.496+382_496+383insCGGGGGCGGGGGCGGGGGG	LOC729966	ENSG00000284797.2	transcript	ENST00000643046.2	protein_coding	2/3			chr19	TogoVar
LONP1_chr19_5686834_5725146	5716253	A A	ATATATAT others(12): Show ATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0069 a0001c0001t0001g0069	1	386	0.0026	19	c.430 others(36): Show c.430-1983_430-1982insATATATATATATATATATA	LONP1	ENSG00000196365.12	transcript	ENST00000360614.8	protein_coding	1/17			chr19	TogoVar
LONRF1_chr8_12716906_12760526	12758768	C C	CTCTCTCT others(12): Show CTCTCTCTCTCTCTCTCTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0073 a0001c0001t0015g0073	1	404	0.0025	19	c.-33 others(30): Show c.-3349_-3348insAGAGAGAGAGAGAGAGAGA	LONRF1	ENSG00000154359.13	transcript	ENST00000398246.8	protein_coding		3243		chr8	TogoVar
LOXHD1_chr18_46472273_46662220	46494845	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG01256.hp1 HG00099.hp1 HG01256.hp1	a0003 a0009 a0003 a0009	a0003c0003 a0009c0019 a0003c0003 a0009c0019	a0003c0003t0001 a0009c0019t0001 a0003c0003t0001 a0009c0019t0001	a0003c0003t0001g0094 a0009c0019t0001g0167 a0003c0003t0001g0094 a0009c0019t0001g0167	2	270	0.0074	19	c.587 others(38): Show c.5879-5704_5879-5703insAAAAAAAAAAAAAAAAAAA	LOXHD1	ENSG00000167210.17	transcript	ENST00000642948.1	protein_coding	37/40			chr18	TogoVar
LOXHD1_chr18_46472273_46662220	46545627	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0009 a0009	a0009c0018 a0009c0018	a0009c0018t0001 a0009c0018t0001	a0009c0018t0001g0123 a0009c0018t0001g0123	1	270	0.0037	19	c.351 others(36): Show c.3515-225_3515-207dupAAAAAAAAAAAAAAAAAAA	LOXHD1	ENSG00000167210.17	transcript	ENST00000642948.1	protein_coding	22/40			chr18	TogoVar
LOXL2_chr8_23291897_23409120	23302463	G G	GACATCCT others(12): Show GACATCCTCAGCCTGGGGAT	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02809.hp1 HG02630.hp1 HG02809.hp1	a0001 a0002 a0001 a0002	a0001c0007 a0002c0004 a0001c0007 a0002c0004	a0001c0007t0002 a0002c0004t0002 a0001c0007t0002 a0002c0004t0002	a0001c0007t0002g0333 a0002c0004t0002g0220 a0001c0007t0002g0333 a0002c0004t0002g0220	2	348	0.0058	19	c.199 others(36): Show c.1997-301_1997-300insATCCCCAGGCTGAGGATGT	LOXL2	ENSG00000134013.16	transcript	ENST00000389131.8	protein_coding	11/13			chr8	TogoVar
LOXL3_chr2_74527258_74558942	74555150	C C	CTAGAGGT others(12): Show CTAGAGGTGGAGGAAGACCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01070.hp1 HG01070.hp1	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0005 a0005c0006t0005	a0005c0006t0005g0145 a0005c0006t0005g0145	1	332	0.0030	19	c.-13 others(30): Show c.-1306_-1288dupAGGTCTTCCTCCACCTCTA	LOXL3	ENSG00000115318.12	transcript	ENST00000264094.8	protein_coding		1209		chr2	TogoVar
LOXL4_chr10_98242690_98273194	98268404	C C	CGGGGGGC others(12): Show CGGGGGGCGGGGGGAGCGGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp2 HG00544.hp2 HG00621.hp1 others(76): Show HG00438.hp2 HG00544.hp2 HG00621.hp1 HG00733.hp1 HG00735.hp2 HG00738.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01109.hp2 HG01168.hp2 HG01346.hp2 HG01433.hp1 HG01496.hp1 HG02071.hp2 HG02083.hp1 HG02109.hp2 HG02129.hp2 HG02145.hp2 HG02165.hp1 HG02280.hp1 HG02300.hp2 HG02559.hp1 HG02602.hp2 HG02630.hp1 HG02647.hp1 HG02735.hp2 HG02809.hp1 HG03098.hp1 HG03195.hp1 HG03209.hp2 HG03239.hp2 HG03471.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03831.hp1 HG03927.hp2 HG03942.hp1 HG04184.hp1 HG04199.hp2 HG04204.hp2 NA18612.hp1 NA18747.hp1 NA18747.hp2 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18950.hp2 NA18956.hp1 NA18962.hp2 NA18967.hp2 NA18977.hp2 NA18978.hp1 NA18981.hp1 NA18989.hp2 NA18995.hp1 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19007.hp2 NA19009.hp1 NA19060.hp2 NA19064.hp1 NA19067.hp2 NA19068.hp1 NA19070.hp1 NA19077.hp1 NA19078.hp2 NA19086.hp2 NA19090.hp2 NA19091.hp2 NA20129.hp1 NA20752.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0006 a0018	a0001c0002 a0001c0004 a0002c0001 others(3): Show a0001c0002 a0001c0004 a0002c0001 a0003c0005 a0006c0008 a0018c0015	a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 others(7): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0004t0001 a0002c0001t0001 a0002c0001t0002 a0002c0001t0008 a0003c0005t0002 a0006c0008t0002 a0018c0015t0002	a0001c0002t0001g0014 a0001c0002t0002g0003 a0001c0002t0002g0007 others(31): Show a0001c0002t0001g0014 a0001c0002t0002g0003 a0001c0002t0002g0007 a0001c0002t0002g0018 a0001c0002t0002g0023 a0001c0002t0002g0032 a0001c0002t0002g0064 a0001c0002t0002g0069 a0001c0002t0002g0073 a0001c0002t0002g0076 a0001c0002t0002g0081 a0001c0002t0002g0088 a0001c0002t0002g0089 a0001c0002t0002g0092 a0001c0002t0004g0015 a0001c0004t0001g0038 a0001c0004t0001g0067 a0002c0001t0001g0006 a0002c0001t0001g0066 a0002c0001t0002g0002 a0002c0001t0008g0055 a0003c0005t0002g0009 a0003c0005t0002g0010 a0003c0005t0002g0011 a0003c0005t0002g0022 a0003c0005t0002g0034 a0003c0005t0002g0087 a0003c0005t0002g0093 a0003c0005t0002g0094 a0003c0005t0002g0095 a0003c0005t0002g0098 a0006c0008t0002g0033 a0006c0008t0002g0082 a0018c0015t0002g0071	79	438	0.1804	19	c.-30 others(28): Show c.-306_-305insCCCGCTCCCCCCGCCCCCC	LOXL4	ENSG00000138131.4	transcript	ENST00000260702.4	protein_coding		211		chr10	TogoVar
LOXL4_chr10_98242690_98273194	98268404	C C	CGGGGGGC others(12): Show CGGGGGGCGGGGGGGAGCGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01175.hp2 HG01192.hp2 HG01175.hp2 HG01192.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0001 a0001c0002 a0002c0001	a0001c0002t0004 a0002c0001t0001 a0001c0002t0004 a0002c0001t0001	a0001c0002t0004g0015 a0002c0001t0001g0150 a0001c0002t0004g0015 a0002c0001t0001g0150	2	438	0.0046	19	c.-30 others(28): Show c.-306_-305insCCGCTCCCCCCCGCCCCCC	LOXL4	ENSG00000138131.4	transcript	ENST00000260702.4	protein_coding		211		chr10	TogoVar
LOXL4_chr10_98242690_98273194	98268407	G G	GGGGCGGG others(12): Show GGGGCGGGGGGAGCGGGGGT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19083.hp2 NA19083.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0003 a0001c0002t0002g0003	1	438	0.0023	19	c.-30 others(28): Show c.-309_-308insACCCCCGCTCCCCCCGCCC	LOXL4	ENSG00000138131.4	transcript	ENST00000260702.4	protein_coding		214		chr10	TogoVar
LOXL4_chr10_98242690_98273194	98268411	C C	CGGGGGGA others(12): Show CGGGGGGAGCGGGGGGGGGG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19090.hp1 NA19090.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0007 a0001c0002t0002g0007	1	438	0.0023	19	c.-31 others(28): Show c.-313_-312insCCCCCCCCCCGCTCCCCCC	LOXL4	ENSG00000138131.4	transcript	ENST00000260702.4	protein_coding		218		chr10	TogoVar
LOXL4_chr10_98242690_98273194	98268420	C C	CGGGGGGG others(12): Show CGGGGGGGGCGGGGGGAGCG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18999.hp2 NA18999.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0080 a0001c0002t0002g0080	1	438	0.0023	19	c.-32 others(28): Show c.-322_-321insCGCTCCCCCCGCCCCCCCC	LOXL4	ENSG00000138131.4	transcript	ENST00000260702.4	protein_coding		227		chr10	TogoVar
LPAR2_chr19_19618655_19633220	19620073	C C	CCATCTGG others(12): Show CCATCTGGTATGGCTGGGAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19072.hp1 NA19072.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0007	1	418	0.0024	19	c.41 others(30): Show c.4182_*4183insATCCCAGCCATACCAGATG	LPAR2	ENSG00000064547.14	transcript	ENST00000407877.8	protein_coding		3581		chr19	TogoVar
LPA_chr6_160526482_160669275	160653968	A A	ATATAATA others(12): Show ATATAATATATAATATATAT	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0075 a0003c0003t0001g0075	1	148	0.0068	19	c.50- others(34): Show c.50-3472_50-3471insATATATATTATATATTATA	LPA	ENSG00000198670.13	transcript	ENST00000316300.10	protein_coding	1/38			chr6	TogoVar
LPCAT2_chr16_55504072_55591666	55509991	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0014 a0001c0002t0014	a0001c0002t0014g0080 a0001c0002t0014g0080	1	314	0.0032	19	c.171 others(34): Show c.171+656_171+657insTTTTTTTTTTTTTTTTTTT	LPCAT2	ENSG00000087253.13	transcript	ENST00000262134.10	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
LPCAT4_chr15_34353633_34372196	34369608	A A	ATTTTTTT others(12): Show ATTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0018 a0001c0001t0001g0018	1	450	0.0022	19	c.-25 others(30): Show c.-2509_-2508insAAAAAAAAAAAAAAAAAAA	LPCAT4	ENSG00000176454.15	transcript	ENST00000314891.11	protein_coding		2413		chr15	TogoVar
LPCAT4_chr15_34353633_34372196	34371824	A A	AGAGAGAG others(12): Show AGAGAGAGAGAGAGAGAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0013 a0001c0001t0002g0013	1	450	0.0022	19	c.-47 others(30): Show c.-4725_-4724insCTCTCTCTCTCTCTCTCTC	LPCAT4	ENSG00000176454.15	transcript	ENST00000314891.11	protein_coding		4629		chr15	TogoVar
LPIN2_chr18_2911999_3018144	2958141	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00639.hp2 HG02683.hp2 others(4): Show HG00597.hp1 HG00639.hp2 HG02683.hp2 HG03710.hp2 NA18941.hp2 NA18942.hp1 NA18975.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0020 a0001c0001t0043 others(2): Show a0001c0001t0001 a0001c0001t0020 a0001c0001t0043 a0001c0001t0055 a0001c0001t0075	a0001c0001t0001g0051 a0001c0001t0001g0086 a0001c0001t0020g0332 others(4): Show a0001c0001t0001g0051 a0001c0001t0001g0086 a0001c0001t0020g0332 a0001c0001t0043g0301 a0001c0001t0043g0302 a0001c0001t0055g0110 a0001c0001t0075g0073	7	380	0.0184	19	c.192 others(36): Show c.192+2507_192+2508insTTTTTTTTTTTTTTTTTTT	LPIN2	ENSG00000101577.11	transcript	ENST00000677752.1	protein_coding	2/19			chr18	TogoVar
LPP_chr3_188149157_188895671	188151210	T T	TTGTAGTT others(12): Show TTGTAGTTAACTTTATATGA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA20752.hp1 NA20752.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0031 a0001c0005t0031	a0001c0005t0031g0003 a0001c0005t0031g0003	1	76	0.0132	19	c.-32 others(30): Show c.-3232_-3231insTGTAGTTAACTTTATATGA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding		2946		chr3	TogoVar
LPP_chr3_188149157_188895671	188346251	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG02622.hp2 HG03130.hp2 others(1): Show HG01167.hp1 HG02622.hp2 HG03130.hp2 NA19030.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0003 a0004c0010 a0001c0001 a0002c0003 a0004c0010	a0001c0001t0008 a0002c0003t0004 a0002c0003t0023 others(1): Show a0001c0001t0008 a0002c0003t0004 a0002c0003t0023 a0004c0010t0035	a0001c0001t0008g0065 a0002c0003t0004g0044 a0002c0003t0023g0001 others(1): Show a0001c0001t0008g0065 a0002c0003t0004g0044 a0002c0003t0023g0001 a0004c0010t0035g0060	4	76	0.0526	19	c.-10 others(36): Show c.-10+4540_-10+4558dupTTTTTTTTTTTTTTTTTTT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188441609	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0003 a0003	a0003c0009 a0003c0009	a0003c0009t0015 a0003c0009t0015	a0003c0009t0015g0066 a0003c0009t0015g0066	1	76	0.0132	19	c.193 others(38): Show c.193+35307_193+35325dupTTTTTTTTTTTTTTTTTTT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188485796	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG02922.hp2 HG03139.hp2 HG01167.hp2 HG02922.hp2 HG03139.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0002c0014 a0001c0001 a0002c0003 a0002c0014	a0001c0001t0018 a0002c0003t0053 a0002c0014t0065 a0001c0001t0018 a0002c0003t0053 a0002c0014t0065	a0001c0001t0018g0072 a0002c0003t0053g0010 a0002c0014t0065g0009 a0001c0001t0018g0072 a0002c0003t0053g0010 a0002c0014t0065g0009	3	76	0.0395	19	c.306 others(36): Show c.306+1110_306+1111insAAAAAAAAAAAAAAAAAAA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188509685	C C	CCTTCCTT others(12): Show CCTTCCTTCCTTCCTTCCCT	intron_variant intron_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0061 a0001c0001t0061	a0001c0001t0061g0023 a0001c0001t0061g0023	1	76	0.0132	19	c.307 others(38): Show c.307-14978_307-14977insTCCTTCCTTCCTTCCCTCT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188657271	T T	TATATATA others(12): Show TATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01978.hp1 HG01978.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0034 a0001c0006t0034	a0001c0006t0034g0039 a0001c0006t0034g0039	1	76	0.0132	19	c.111 others(40): Show c.1113+47437_1113+47438insATATATATAATATATATAT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188766378	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00639.hp2 HG01175.hp1 others(6): Show HG00438.hp1 HG00639.hp2 HG01175.hp1 HG01358.hp2 HG02109.hp1 HG02486.hp1 HG02738.hp1 HG03453.hp2 HG03704.hp2	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0007	a0001c0001 a0001c0002 a0001c0005 others(3): Show a0001c0001 a0001c0002 a0001c0005 a0002c0003 a0005c0012 a0007c0013	a0001c0001t0001 a0001c0001t0026 a0001c0002t0001 others(6): Show a0001c0001t0001 a0001c0001t0026 a0001c0002t0001 a0001c0002t0011 a0001c0002t0019 a0001c0005t0040 a0002c0003t0059 a0005c0012t0014 a0007c0013t0003	a0001c0001t0001g0056 a0001c0001t0026g0069 a0001c0002t0001g0076 others(6): Show a0001c0001t0001g0056 a0001c0001t0026g0069 a0001c0002t0001g0076 a0001c0002t0011g0038 a0001c0002t0019g0041 a0001c0005t0040g0030 a0002c0003t0059g0011 a0005c0012t0014g0045 a0007c0013t0003g0046	9	76	0.1184	19	c.141 others(38): Show c.1410+6106_1410+6107insAAAAAAAAAAAAAAAAAAA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188843786	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01175.hp1 HG02074.hp1 others(2): Show HG00438.hp1 HG01175.hp1 HG02074.hp1 HG02074.hp2 HG02615.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0007 a0001c0001 a0001c0002 a0002c0007	a0001c0001t0001 a0001c0002t0011 a0001c0002t0024 others(2): Show a0001c0001t0001 a0001c0002t0011 a0001c0002t0024 a0001c0002t0058 a0002c0007t0007	a0001c0001t0001g0056 a0001c0002t0011g0038 a0001c0002t0024g0036 others(2): Show a0001c0001t0001g0056 a0001c0002t0011g0038 a0001c0002t0024g0036 a0001c0002t0058g0013 a0002c0007t0007g0049	5	76	0.0658	19	c.141 others(40): Show c.1411-22402_1411-22401insAAAAAAAAAAAAAAAAAAA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188881139	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03195.hp2 HG03453.hp2 HG03540.hp2 HG03195.hp2 HG03453.hp2 HG03540.hp2	a0002 a0007 a0002 a0007	a0002c0004 a0007c0013 a0002c0004 a0007c0013	a0002c0004t0003 a0002c0004t0067 a0007c0013t0003 a0002c0004t0003 a0002c0004t0067 a0007c0013t0003	a0002c0004t0003g0050 a0002c0004t0067g0008 a0007c0013t0003g0046 a0002c0004t0003g0050 a0002c0004t0067g0008 a0007c0013t0003g0046	3	76	0.0395	19	c.66 others(30): Show c.6661_*6679dupAAAAAAAAAAAAAAAAAAA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	12/12	6680	INFO_REALIGN_3_PRIME	chr3	TogoVar
LRBA_chr4_150259435_151020284	150346757	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG03579.hp2 HG02055.hp2 HG03579.hp2	a0001 a0010 a0001 a0010	a0001c0001 a0010c0018 a0001c0001 a0010c0018	a0001c0001t0001 a0010c0018t0001 a0001c0001t0001 a0010c0018t0001	a0001c0001t0001g0119 a0010c0018t0001g0125 a0001c0001t0001g0119 a0010c0018t0001g0125	2	180	0.0111	19	c.736 others(38): Show c.7362+3216_7362+3234dupTTTTTTTTTTTTTTTTTTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	48/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150371182	A A	ATTTTTTT others(12): Show ATTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0010 a0010	a0010c0018 a0010c0018	a0010c0018t0001 a0010c0018t0001	a0010c0018t0001g0125 a0010c0018t0001g0125	1	180	0.0056	19	c.719 others(40): Show c.7195-21042_7195-21024dupAAAAAAAAAAAAAAAAAAA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	47/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150443853	A A	ATATATAT others(12): Show ATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18979.hp2 NA18979.hp2	a0003 a0003	a0003c0035 a0003c0035	a0003c0035t0003 a0003c0035t0003	a0003c0035t0003g0153 a0003c0035t0003g0153	1	180	0.0056	19	c.678 others(38): Show c.6781-6990_6781-6989insATATATATATATATATATA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	44/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150489144	A A	AATATATA others(12): Show AATATATAAGACTATATAAT	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0090 a0001c0001t0001g0090	1	180	0.0056	19	c.644 others(38): Show c.6449-1311_6449-1310insATTATATAGTCTTATATAT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	41/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150489144	A A	AATATATC others(12): Show AATATATCAGAATATATAAT	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01515.hp2 HG04115.hp1 HG01255.hp1 HG01515.hp2 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0093 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0093	3	180	0.0167	19	c.644 others(38): Show c.6449-1329_6449-1311dupATTATATATTCTGATATAT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	41/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150622688	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0010 a0010	a0010c0018 a0010c0018	a0010c0018t0001 a0010c0018t0001	a0010c0018t0001g0125 a0010c0018t0001g0125	1	180	0.0056	19	c.592 others(40): Show c.5922-23576_5922-23558dupAAAAAAAAAAAAAAAAAAA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150648158	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG02027.hp2 HG02135.hp1 others(10): Show HG00597.hp2 HG02027.hp2 HG02135.hp1 HG02486.hp1 HG02486.hp2 HG02723.hp2 HG03041.hp2 NA18950.hp1 NA18952.hp2 NA18959.hp2 NA18978.hp2 NA19060.hp2 NA19068.hp1	a0001 a0006 a0011 others(2): Show a0001 a0006 a0011 a0021 a0023	a0001c0001 a0001c0019 a0006c0008 others(3): Show a0001c0001 a0001c0019 a0006c0008 a0011c0031 a0021c0024 a0023c0043	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0019t0002 a0006c0008t0003 a0011c0031t0002 a0021c0024t0002 a0023c0043t0002	a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0002g0036 others(10): Show a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0109 a0001c0001t0004g0025 a0001c0001t0004g0064 a0001c0001t0004g0103 a0001c0019t0002g0122 a0006c0008t0003g0114 a0011c0031t0002g0039 a0021c0024t0002g0042 a0023c0043t0002g0180	13	180	0.0722	19	c.592 others(40): Show c.5921+35374_5921+35392dupTTTTTTTTTTTTTTTTTTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150685420	A A	ATATATAT others(12): Show ATATATATATATATATATTT	intron_variant intron_variant	MODIFIER	HG02809.hp1 NA18966.hp2 HG02809.hp1 NA18966.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0003 a0002c0003t0001 a0001c0001t0003 a0002c0003t0001	a0001c0001t0003g0055 a0002c0003t0001g0011 a0001c0001t0003g0055 a0002c0003t0001g0011	2	180	0.0111	19	c.575 others(38): Show c.5755-1704_5755-1703insAAATATATATATATATATA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	36/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150685420	A A	ATATATAT others(12): Show ATATATATATATATATTTTT	intron_variant intron_variant	MODIFIER	NA19068.hp2 NA19068.hp2	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0003 a0004c0006t0003	a0004c0006t0003g0149 a0004c0006t0003g0149	1	180	0.0056	19	c.575 others(38): Show c.5755-1704_5755-1703insAAAAATATATATATATATA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	36/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150685420	A A	ATATATAT others(12): Show ATATATATATATATTTTTTT	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00621.hp1	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0003 a0004c0006t0003	a0004c0006t0003g0147 a0004c0006t0003g0147	1	180	0.0056	19	c.575 others(38): Show c.5755-1704_5755-1703insAAAAAAATATATATATATA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	36/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150685420	A A	ATATATAT others(12): Show ATATATATATATTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG01255.hp2	a0002 a0002	a0002c0015 a0002c0015	a0002c0015t0001 a0002c0015t0001	a0002c0015t0001g0047 a0002c0015t0001g0047	1	180	0.0056	19	c.575 others(38): Show c.5755-1704_5755-1703insAAAAAAAAATATATATATA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	36/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150685421	T T	TATATATA others(12): Show TATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00544.hp2 NA18941.hp2 NA19060.hp1 others(1): Show HG00544.hp2 NA18941.hp2 NA19060.hp1 NA19084.hp1	a0001 a0003 a0022 a0001 a0003 a0022	a0001c0001 a0003c0012 a0022c0033 a0001c0001 a0003c0012 a0022c0033	a0001c0001t0001 a0003c0012t0003 a0022c0033t0001 a0001c0001t0001 a0003c0012t0003 a0022c0033t0001	a0001c0001t0001g0067 a0001c0001t0001g0079 a0003c0012t0003g0077 others(1): Show a0001c0001t0001g0067 a0001c0001t0001g0079 a0003c0012t0003g0077 a0022c0033t0001g0073	4	180	0.0222	19	c.575 others(38): Show c.5755-1705_5755-1704insTATATATATATATATATAT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	36/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150694462	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19084.hp1 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0067	1	180	0.0056	19	c.575 others(40): Show c.5755-10746_5755-10745insTTTTTTTTTTTTTTTTTTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	36/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150697325	G G	GAAAAAAA others(12): Show GAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0061 a0001c0001t0003g0061	1	180	0.0056	19	c.575 others(40): Show c.5755-13627_5755-13609dupTTTTTTTTTTTTTTTTTTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	36/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	151008988	A A	AAAAAAAA others(12): Show AAAAAAAAAAAAAAAAATAT	intron_variant intron_variant	MODIFIER	NA19084.hp2 NA19084.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0148 a0002c0003t0002g0148	1	180	0.0056	19	c.216 others(36): Show c.216+5438_216+5439insATATTTTTTTTTTTTTTTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	2/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	151008988	A A	AAAAAAAA others(12): Show AAAAAAAAAAAAAAATATAT	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG03130.hp2 HG02572.hp2 HG03130.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0027 a0002c0002t0001g0133 a0001c0001t0001g0027 a0002c0002t0001g0133	2	180	0.0111	19	c.216 others(36): Show c.216+5438_216+5439insATATATTTTTTTTTTTTTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	2/56			chr4	TogoVar
LRCH1_chr13_46548170_46749898	46573866	A A	ATATATAT others(12): Show ATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18962.hp1 NA18962.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0010 a0001c0001t0001g0010	1	274	0.0037	19	c.307 others(38): Show c.307+20164_307+20165insATATATATATATATATATT	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH1_chr13_46548170_46749898	46573866	A A	ATATATAT others(12): Show ATATATATATATATATATTT	intron_variant intron_variant	MODIFIER	NA18954.hp2 NA19074.hp1 NA18954.hp2 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0214 a0001c0001t0001g0215	2	274	0.0073	19	c.307 others(38): Show c.307+20164_307+20165insATATATATATATATATTTT	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH1_chr13_46548170_46749898	46573866	A A	ATATATAT others(12): Show ATATATATATATATATTTTT	intron_variant intron_variant	MODIFIER	NA18968.hp2 NA19001.hp1 NA19057.hp1 NA18968.hp2 NA19001.hp1 NA19057.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0207 a0001c0001t0001g0212 a0001c0001t0001g0216 a0001c0001t0001g0207 a0001c0001t0001g0212 a0001c0001t0001g0216	3	274	0.0110	19	c.307 others(38): Show c.307+20164_307+20165insATATATATATATATTTTTT	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH1_chr13_46548170_46749898	46582648	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02040.hp2 HG02818.hp1 NA18944.hp1 others(1): Show HG02040.hp2 HG02818.hp1 NA18944.hp1 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0004t0008 a0001c0001t0001 a0001c0001t0002 a0001c0004t0008	a0001c0001t0001g0031 a0001c0001t0001g0046 a0001c0001t0002g0131 others(1): Show a0001c0001t0001g0031 a0001c0001t0001g0046 a0001c0001t0002g0131 a0001c0004t0008g0233	4	274	0.0146	19	c.307 others(38): Show c.307+28951_307+28969dupTTTTTTTTTTTTTTTTTTT	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH1_chr13_46548170_46749898	46619059	T T	TTTCCTTC others(12): Show TTTCCTTCCTTCCTTCCTTC	intron_variant intron_variant	MODIFIER	HG02129.hp2 HG02132.hp1 NA19001.hp2 others(1): Show HG02129.hp2 HG02132.hp1 NA19001.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0005 a0001c0001 a0001c0003 a0001c0005	a0001c0001t0001 a0001c0003t0004 a0001c0005t0005 a0001c0001t0001 a0001c0003t0004 a0001c0005t0005	a0001c0001t0001g0024 a0001c0003t0004g0035 a0001c0005t0005g0156 others(1): Show a0001c0001t0001g0024 a0001c0003t0004g0035 a0001c0005t0005g0156 a0001c0005t0005g0157	4	274	0.0146	19	c.308 others(38): Show c.308-31142_308-31141insTTCCTTCCTTCCTTCCTTC	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19			chr13	TogoVar

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