Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LYRM4_chr6_5103419_5265950	5245113	A A	AAATATAT others(12): Show AAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18946.hp1 NA18946.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0136 a0001c0001t0001g0136	1	286	0.0035	19	c.86+ others(36): Show c.86+15534_86+15535insATATATATATATATATATT	LYRM4	ENSG00000214113.11	transcript	ENST00000330636.9	protein_coding	1/2			chr6	TogoVar
LYRM7_chr5_131165944_131210428	131181296	A A	ATATATAT others(12): Show ATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0054 a0001c0001t0054	a0001c0001t0054g0030 a0001c0001t0054g0030	1	300	0.0033	19	c.92- others(32): Show c.92-933_92-932insTATATATATATATATATAT	LYRM7	ENSG00000186687.16	transcript	ENST00000379380.9	protein_coding	2/4			chr5	TogoVar
LYRM7_chr5_131165944_131210428	131181300	A A	ATATATAT others(12): Show ATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02698.hp2 HG06807.hp1 HG02698.hp2 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0017 a0001c0001t0001 a0001c0001t0017	a0001c0001t0001g0205 a0001c0001t0017g0169 a0001c0001t0001g0205 a0001c0001t0017g0169	2	300	0.0067	19	c.92- others(32): Show c.92-929_92-928insTATATATATATATATATAT	LYRM7	ENSG00000186687.16	transcript	ENST00000379380.9	protein_coding	2/4			chr5	TogoVar
LYRM7_chr5_131165944_131210428	131181302	A A	AAAAAAAT others(12): Show AAAAAAATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02735.hp1 HG02735.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0176 a0001c0001t0011g0176	1	300	0.0033	19	c.92- others(32): Show c.92-926_92-925insAAAAATATATATATATATA	LYRM7	ENSG00000186687.16	transcript	ENST00000379380.9	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr5	TogoVar
LYRM7_chr5_131165944_131210428	131181302	A A	AAAAATAT others(12): Show AAAAATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG01070.hp2 HG01074.hp2 others(6): Show HG00544.hp1 HG01070.hp2 HG01074.hp2 HG01192.hp2 HG01255.hp2 HG01952.hp1 HG03831.hp2 NA18975.hp1 NA19005.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0011 a0001c0001t0012 a0001c0001t0030 a0001c0001t0046 a0001c0001t0057	a0001c0001t0001g0222 a0001c0001t0002g0271 a0001c0001t0005g0196 others(6): Show a0001c0001t0001g0222 a0001c0001t0002g0271 a0001c0001t0005g0196 a0001c0001t0006g0217 a0001c0001t0011g0268 a0001c0001t0012g0225 a0001c0001t0030g0175 a0001c0001t0046g0224 a0001c0001t0057g0223	9	300	0.0300	19	c.92- others(32): Show c.92-926_92-925insAAATATATATATATATATA	LYRM7	ENSG00000186687.16	transcript	ENST00000379380.9	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr5	TogoVar
LYRM7_chr5_131165944_131210428	131181302	A A	AAATATAT others(12): Show AAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00438.hp1 HG00544.hp2 others(21): Show HG00323.hp2 HG00438.hp1 HG00544.hp2 HG01069.hp2 HG01070.hp1 HG01081.hp2 HG01099.hp2 HG01109.hp2 HG01433.hp2 HG02004.hp2 HG02015.hp2 HG02129.hp1 HG02145.hp2 HG02148.hp1 HG02683.hp2 HG03041.hp2 HG03704.hp2 HG04204.hp2 NA18940.hp2 NA18967.hp1 NA19003.hp2 NA19075.hp1 NA19088.hp1 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0012 a0001c0001t0013 a0001c0001t0018 a0001c0001t0020 a0001c0001t0024 a0001c0001t0032	a0001c0001t0001g0012 a0001c0001t0001g0129 a0001c0001t0001g0130 others(20): Show a0001c0001t0001g0012 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0213 a0001c0001t0002g0198 a0001c0001t0002g0204 a0001c0001t0002g0243 a0001c0001t0004g0012 a0001c0001t0004g0013 a0001c0001t0004g0101 a0001c0001t0004g0199 a0001c0001t0012g0136 a0001c0001t0012g0231 a0001c0001t0013g0128 a0001c0001t0013g0273 a0001c0001t0018g0274 a0001c0001t0018g0275 a0001c0001t0020g0131 a0001c0001t0024g0132 a0001c0001t0032g0267	24	300	0.0800	19	c.92- others(32): Show c.92-926_92-925insATATATATATATATATATA	LYRM7	ENSG00000186687.16	transcript	ENST00000379380.9	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr5	TogoVar
LYRM7_chr5_131165944_131210428	131181302	A A	ATATATAT others(12): Show ATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG01074.hp1 HG01256.hp1 others(15): Show HG00423.hp1 HG01074.hp1 HG01256.hp1 HG01258.hp1 HG02074.hp2 HG02083.hp1 HG02257.hp1 HG03017.hp1 HG03239.hp2 NA18612.hp2 NA18960.hp1 NA18960.hp2 NA18990.hp2 NA19012.hp1 NA19058.hp1 NA19060.hp1 NA20805.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0011 a0001c0001t0045 a0001c0001t0055 a0001c0001t0056 a0001c0001t0073	a0001c0001t0001g0111 a0001c0001t0001g0191 a0001c0001t0001g0202 others(14): Show a0001c0001t0001g0111 a0001c0001t0001g0191 a0001c0001t0001g0202 a0001c0001t0001g0235 a0001c0001t0002g0010 a0001c0001t0002g0091 a0001c0001t0002g0218 a0001c0001t0002g0240 a0001c0001t0002g0278 a0001c0001t0002g0279 a0001c0001t0004g0148 a0001c0001t0004g0201 a0001c0001t0011g0150 a0001c0001t0045g0193 a0001c0001t0055g0149 a0001c0001t0056g0152 a0001c0001t0073g0151	18	300	0.0600	19	c.92- others(32): Show c.92-927_92-926insTATATATATATATATATAT	LYRM7	ENSG00000186687.16	transcript	ENST00000379380.9	protein_coding	2/4			chr5	TogoVar
LYRM7_chr5_131165944_131210428	131204742	T T	TGTGTGTG others(12): Show TGTGTGTGTGTGTGTGTGTG	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0036 a0001c0001t0036	a0001c0001t0036g0034 a0001c0001t0036g0034	1	300	0.0033	19	c.51 others(30): Show c.5141_*5142insGTGTGTGTGTGTGTGTGTG	LYRM7	ENSG00000186687.16	transcript	ENST00000379380.9	protein_coding	5/5	5142		chr5	TogoVar
LYSMD1_chr1_151154748_151170902	151160238	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00099.hp2 HG00323.hp2 HG00642.hp1 others(13): Show HG00099.hp2 HG00323.hp2 HG00642.hp1 HG00642.hp2 HG00741.hp1 HG01069.hp2 HG01515.hp1 HG01981.hp2 HG02148.hp1 HG03195.hp2 NA18944.hp1 NA18963.hp1 NA18982.hp2 NA18999.hp1 NA19009.hp2 NA19054.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0061 a0001c0001t0007 a0001c0001t0061	a0001c0001t0007g0013 a0001c0001t0007g0018 a0001c0001t0007g0020 others(2): Show a0001c0001t0007g0013 a0001c0001t0007g0018 a0001c0001t0007g0020 a0001c0001t0007g0122 a0001c0001t0061g0075	16	344	0.0465	19	c.64 others(28): Show c.643_*644insTTTTTTTTTTTTTTTTTTT	LYSMD1	ENSG00000163155.12	transcript	ENST00000368908.10	protein_coding	3/3	643		chr1	TogoVar
LYZL1_chr10_29284070_29316232	29297639	T T	TTACTTGG others(12): Show TTACTTGGTAGCTGTCTCAG	intron_variant intron_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0125 a0001c0001t0001g0125	1	442	0.0023	19	c.298 others(36): Show c.298+4964_298+4982dupACTTGGTAGCTGTCTCAGT	LYZL1	ENSG00000120563.10	transcript	ENST00000649382.2	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr10	TogoVar
LYZL2_chr10_30606779_30634753	30617678	A A	AAAAAAAA others(12): Show AAAAAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02027.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0138 a0001c0001t0001g0138	1	456	0.0022	19	c.299 others(36): Show c.299-4779_299-4778insCTTTTTTTTTTTTTTTTTT	LYZL2	ENSG00000151033.10	transcript	ENST00000647634.2	protein_coding	3/4			chr10	TogoVar
LYZL2_chr10_30606779_30634753	30617679	A A	AAAAAAAA others(12): Show AAAAAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG01123.hp2 HG01943.hp1 others(34): Show HG00099.hp1 HG01123.hp2 HG01943.hp1 HG02129.hp2 HG02132.hp2 HG02523.hp2 HG02738.hp1 HG02818.hp2 HG02896.hp1 HG03017.hp1 HG03209.hp2 HG03239.hp2 HG03491.hp1 HG03654.hp2 HG03688.hp2 HG03834.hp2 HG04199.hp1 NA18612.hp1 NA18945.hp1 NA18946.hp2 NA18956.hp1 NA18959.hp1 NA18959.hp2 NA18962.hp1 NA18965.hp1 NA18968.hp1 NA18972.hp2 NA18990.hp1 NA18995.hp1 NA19005.hp2 NA19010.hp1 NA19055.hp2 NA19063.hp1 NA19064.hp2 NA19067.hp2 NA19080.hp1 NA19082.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0007 others(1): Show a0001c0001 a0001c0002 a0001c0007 a0005c0011	a0001c0001t0001 a0001c0002t0001 a0001c0007t0001 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0007t0001 a0005c0011t0001	a0001c0001t0001g0001 a0001c0001t0001g0035 a0001c0001t0001g0073 others(29): Show a0001c0001t0001g0001 a0001c0001t0001g0035 a0001c0001t0001g0073 a0001c0001t0001g0086 a0001c0001t0001g0097 a0001c0001t0001g0117 a0001c0001t0001g0122 a0001c0001t0001g0133 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0148 a0001c0001t0001g0179 a0001c0001t0001g0181 a0001c0001t0001g0232 a0001c0001t0001g0244 a0001c0001t0001g0284 a0001c0001t0001g0287 a0001c0001t0001g0311 a0001c0001t0001g0319 a0001c0001t0001g0343 a0001c0001t0001g0345 a0001c0001t0001g0349 a0001c0001t0001g0351 a0001c0001t0001g0352 a0001c0001t0001g0358 a0001c0001t0001g0363 a0001c0001t0001g0370 a0001c0001t0001g0391 a0001c0001t0001g0398 a0001c0002t0001g0397 a0001c0007t0001g0357 a0005c0011t0001g0299	37	456	0.0811	19	c.299 others(36): Show c.299-4780_299-4779insCTTTTTTTTTTTTTTTTTT	LYZL2	ENSG00000151033.10	transcript	ENST00000647634.2	protein_coding	3/4			chr10	TogoVar
LZTS1_chr8_20241165_20308963	20251098	A A	AATATATA others(12): Show AATATATATATATATTATAT	intron_variant intron_variant	MODIFIER	NA18975.hp2 NA18975.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0137 a0001c0001t0012g0137	1	406	0.0025	19	c.115 others(36): Show c.1150-736_1150-735insATATAATATATATATATAT	LZTS1	ENSG00000061337.16	transcript	ENST00000381569.5	protein_coding	3/3			chr8	TogoVar
MAB21L4_chr2_240881048_240901156	240883694	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0054 a0001c0002t0002g0054	1	446	0.0022	19	c.33 others(30): Show c.3375_*3376insAAAAAAAAAAAAAAAAAAA	MAB21L4	ENSG00000172478.18	transcript	ENST00000388934.5	protein_coding		2353		chr2	TogoVar
MACF1_chr1_39199695_39492138	39393196	A A	AAAAAAAA others(12): Show AAAAAAAAAAAAATATATAT	intron_variant intron_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0006 a0006	a0006c0005 a0006c0005	a0006c0005t0001 a0006c0005t0001	a0006c0005t0001g0244 a0006c0005t0001g0244	1	246	0.0041	19	c.158 others(40): Show c.15816+4539_15816+4540insAAAAAAAAAAATATATATA	MACF1	ENSG00000127603.32	transcript	ENST00000564288.6	protein_coding	58/100		INFO_REALIGN_3_PRIME	chr1	TogoVar
MACF1_chr1_39199695_39492138	39406756	A A	AAAAAAAA others(12): Show AAAAAAAAAAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG02572.hp1 HG02602.hp2 others(1): Show HG01106.hp1 HG02572.hp1 HG02602.hp2 HG02976.hp2	a0006 a0006	a0006c0005 a0006c0005	a0006c0005t0001 a0006c0005t0001	a0006c0005t0001g0235 a0006c0005t0001g0237 a0006c0005t0001g0239 others(1): Show a0006c0005t0001g0235 a0006c0005t0001g0237 a0006c0005t0001g0239 a0006c0005t0001g0243	4	246	0.0163	19	c.158 others(42): Show c.15817-15616_15817-15615insAAAAAAAAAAAAAAAACAA	MACF1	ENSG00000127603.32	transcript	ENST00000564288.6	protein_coding	58/100		INFO_REALIGN_3_PRIME	chr1	TogoVar
MACROD1_chr11_63993558_64171113	64114343	T T	TGATGGAT others(12): Show TGATGGATGGATGGTGGACA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00438.hp1 HG00558.hp1 others(60): Show HG00099.hp2 HG00438.hp1 HG00558.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG01071.hp2 HG01099.hp1 HG01099.hp2 HG01167.hp1 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01261.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01934.hp2 HG01981.hp2 HG02015.hp2 HG02129.hp1 HG02135.hp1 HG02257.hp1 HG02300.hp2 HG02559.hp1 HG02615.hp1 HG02698.hp2 HG02735.hp2 HG02965.hp2 HG03017.hp1 HG03017.hp2 HG03139.hp2 HG03195.hp1 HG03453.hp1 HG03453.hp2 HG03486.hp2 HG03492.hp1 HG03579.hp1 HG03688.hp1 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18612.hp1 NA18747.hp2 NA18943.hp1 NA18944.hp2 NA18966.hp2 NA18994.hp1 NA18998.hp1 NA19009.hp1 NA19011.hp2 NA19056.hp2 NA19081.hp2 NA20752.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0006 others(1): Show a0001c0001 a0001c0002 a0001c0006 a0002c0004	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 others(2): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0001c0006t0001 a0002c0004t0001	a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 others(60): Show a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0045 a0001c0001t0001g0051 a0001c0001t0001g0053 a0001c0001t0001g0055 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0002t0001g0022 a0001c0002t0001g0025 a0001c0002t0001g0027 a0001c0002t0001g0030 a0001c0002t0001g0038 a0001c0002t0001g0042 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0046 a0001c0002t0001g0047 a0001c0002t0001g0048 a0001c0002t0001g0049 a0001c0002t0001g0050 a0001c0002t0001g0052 a0001c0002t0001g0054 a0001c0002t0001g0056 a0001c0002t0001g0059 a0001c0002t0001g0060 a0001c0002t0001g0065 a0001c0002t0001g0068 a0001c0002t0001g0069 a0001c0002t0001g0070 a0001c0002t0001g0073 a0001c0002t0001g0074 a0001c0002t0001g0109 a0001c0002t0001g0126 a0001c0002t0001g0141 a0001c0002t0002g0063 a0001c0002t0002g0161 a0001c0006t0001g0198 a0002c0004t0001g0041	63	198	0.3182	19	c.517 others(38): Show c.517+36895_517+36896insTGTCCACCATCCATCCATC	MACROD1	ENSG00000133315.12	transcript	ENST00000255681.7	protein_coding	3/10			chr11	TogoVar
MACROD2_chr20_13990516_16058197	15206721	G G	GTTTTTTT others(12): Show GTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0014 a0001c0001t0001g0014	1	24	0.0417	19	c.419 others(38): Show c.419-23211_419-23193dupTTTTTTTTTTTTTTTTTTT	MACROD2	ENSG00000172264.19	transcript	ENST00000684519.1	protein_coding	5/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
MACROD2_chr20_13990516_16058197	15302387	C C	CACACACA others(12): Show CACACACACACACAAGACAT	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	24	0.0417	19	c.540 others(38): Show c.540+72329_540+72330insCACACACACAAGACATACA	MACROD2	ENSG00000172264.19	transcript	ENST00000684519.1	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
MADCAM1_chr19_491486_510343	497328	G G	GGGGGGCC others(12): Show GGGGGGCCCGGGAGAGGGGA	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02257.hp1 HG02258.hp1 others(4): Show HG02056.hp1 HG02257.hp1 HG02258.hp1 HG03225.hp1 HG03225.hp2 HG03486.hp1 NA18973.hp1	a0005 a0008 a0024 a0005 a0008 a0024	a0005c0007 a0005c0015 a0008c0008 others(1): Show a0005c0007 a0005c0015 a0008c0008 a0024c0031	a0005c0007t0001 a0005c0015t0001 a0008c0008t0001 others(1): Show a0005c0007t0001 a0005c0015t0001 a0008c0008t0001 a0024c0031t0001	a0005c0007t0001g0032 a0005c0007t0001g0168 a0005c0015t0001g0107 others(2): Show a0005c0007t0001g0032 a0005c0007t0001g0168 a0005c0015t0001g0107 a0008c0008t0001g0010 a0024c0031t0001g0094	7	364	0.0192	19	c.53- others(32): Show c.53-493_53-475dupAGAGGGGAGGGGGCCCGGG	MADCAM1	ENSG00000099866.16	transcript	ENST00000215637.8	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr19	TogoVar
MADCAM1_chr19_491486_510343	497328	G G	GGGGGGGC others(12): Show GGGGGGGCCCGGGAGAGGGA	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0030 a0030	a0030c0030 a0030c0030	a0030c0030t0001 a0030c0030t0001	a0030c0030t0001g0093 a0030c0030t0001g0093	1	364	0.0028	19	c.53- others(32): Show c.53-500_53-499insGCCCGGGAGAGGGAGGGGG	MADCAM1	ENSG00000099866.16	transcript	ENST00000215637.8	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr19	TogoVar
MADCAM1_chr19_491486_510343	497354	C C	CCGGGAGA others(12): Show CCGGGAGAGGGGAGGGGGCT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp2 others(232): Show HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00280.hp2 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp2 HG01070.hp1 HG01071.hp2 HG01099.hp1 HG01099.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01243.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01433.hp2 HG01516.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01934.hp2 HG01952.hp1 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp2 HG02055.hp1 HG02056.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp2 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02622.hp1 HG02630.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02818.hp2 HG02895.hp2 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03486.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03669.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG03927.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18522.hp1 NA18522.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18945.hp2 NA18948.hp1 NA18948.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18962.hp1 NA18962.hp2 NA18966.hp1 NA18967.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18983.hp1 NA18983.hp2 NA18989.hp1 NA18989.hp2 NA18994.hp1 NA18994.hp2 NA18999.hp1 NA19000.hp1 NA19000.hp2 NA19003.hp2 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp2 NA19012.hp1 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA19058.hp1 NA19058.hp2 NA19059.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp2 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(21): Show a0001 a0002 a0003 a0004 a0005 a0007 a0008 a0009 a0011 a0012 a0013 a0014 a0015 a0016 a0017 a0018 a0019 a0020 a0021 a0025 a0026 a0027 a0028 a0029	a0001c0001 a0001c0012 a0001c0016 others(36): Show a0001c0001 a0001c0012 a0001c0016 a0001c0024 a0001c0036 a0002c0013 a0002c0014 a0002c0043 a0003c0002 a0003c0041 a0004c0003 a0004c0034 a0004c0048 a0005c0007 a0005c0015 a0005c0023 a0007c0009 a0007c0045 a0008c0008 a0009c0010 a0009c0051 a0011c0018 a0012c0022 a0013c0028 a0013c0044 a0014c0021 a0015c0020 a0016c0029 a0017c0027 a0018c0025 a0019c0026 a0020c0033 a0020c0047 a0021c0052 a0025c0042 a0026c0035 a0027c0050 a0028c0049 a0029c0046	a0001c0001t0001 a0001c0001t0002 a0001c0012t0001 others(41): Show a0001c0001t0001 a0001c0001t0002 a0001c0012t0001 a0001c0016t0001 a0001c0024t0001 a0001c0036t0002 a0002c0013t0002 a0002c0014t0001 a0002c0043t0001 a0003c0002t0001 a0003c0002t0002 a0003c0041t0001 a0004c0003t0001 a0004c0003t0002 a0004c0034t0001 a0004c0048t0001 a0005c0007t0001 a0005c0015t0001 a0005c0023t0001 a0007c0009t0001 a0007c0009t0002 a0007c0045t0001 a0008c0008t0001 a0009c0010t0002 a0009c0051t0001 a0011c0018t0002 a0012c0022t0001 a0013c0028t0001 a0013c0044t0002 a0014c0021t0001 a0014c0021t0002 a0015c0020t0001 a0016c0029t0001 a0017c0027t0001 a0018c0025t0001 a0019c0026t0001 a0020c0033t0001 a0020c0047t0001 a0021c0052t0001 a0025c0042t0001 a0026c0035t0001 a0027c0050t0002 a0028c0049t0001 a0029c0046t0002	a0001c0001t0001g0012 a0001c0001t0001g0081 a0001c0001t0001g0176 others(182): Show a0001c0001t0001g0012 a0001c0001t0001g0081 a0001c0001t0001g0176 a0001c0001t0001g0180 a0001c0001t0001g0189 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0197 a0001c0001t0001g0201 a0001c0001t0001g0203 a0001c0001t0002g0008 a0001c0001t0002g0035 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0173 a0001c0001t0002g0175 a0001c0001t0002g0179 a0001c0001t0002g0181 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0187 a0001c0001t0002g0190 a0001c0001t0002g0191 a0001c0001t0002g0192 a0001c0001t0002g0196 a0001c0001t0002g0202 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0207 a0001c0001t0002g0208 a0001c0001t0002g0209 a0001c0001t0002g0210 a0001c0001t0002g0211 a0001c0001t0002g0212 a0001c0001t0002g0213 a0001c0001t0002g0214 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0218 a0001c0001t0002g0219 a0001c0001t0002g0220 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0231 a0001c0001t0002g0238 a0001c0001t0002g0261 a0001c0001t0002g0262 a0001c0001t0002g0264 a0001c0001t0002g0265 a0001c0012t0001g0017 a0001c0012t0001g0018 a0001c0012t0001g0198 a0001c0012t0001g0199 a0001c0012t0001g0206 a0001c0012t0001g0258 a0001c0016t0001g0028 a0001c0016t0001g0086 a0001c0016t0001g0087 a0001c0024t0001g0058 a0001c0024t0001g0088 a0001c0036t0002g0174 a0002c0013t0002g0009 a0002c0013t0002g0083 a0002c0013t0002g0084 a0002c0013t0002g0090 a0002c0013t0002g0109 a0002c0014t0001g0034 a0002c0043t0001g0251 a0003c0002t0001g0002 a0003c0002t0001g0007 a0003c0002t0001g0013 a0003c0002t0001g0022 a0003c0002t0001g0024 a0003c0002t0001g0045 a0003c0002t0001g0047 a0003c0002t0001g0048 a0003c0002t0001g0049 a0003c0002t0001g0050 a0003c0002t0001g0053 a0003c0002t0001g0054 a0003c0002t0001g0055 a0003c0002t0001g0059 a0003c0002t0001g0060 a0003c0002t0001g0097 a0003c0002t0001g0108 a0003c0002t0002g0014 a0003c0002t0002g0023 a0003c0002t0002g0051 a0003c0002t0002g0052 a0003c0002t0002g0056 a0003c0002t0002g0095 a0003c0041t0001g0104 a0004c0003t0001g0003 a0004c0003t0001g0026 a0004c0003t0001g0063 a0004c0003t0001g0066 a0004c0003t0001g0069 a0004c0003t0001g0074 a0004c0003t0001g0075 a0004c0003t0001g0076 a0004c0003t0001g0096 a0004c0003t0001g0252 a0004c0003t0002g0015 a0004c0003t0002g0044 a0004c0003t0002g0046 a0004c0003t0002g0068 a0004c0003t0002g0070 a0004c0003t0002g0071 a0004c0003t0002g0077 a0004c0003t0002g0078 a0004c0003t0002g0079 a0004c0003t0002g0080 a0004c0003t0002g0171 a0004c0034t0001g0072 a0004c0048t0001g0073 a0005c0007t0001g0169 a0005c0015t0001g0188 a0005c0015t0001g0246 a0005c0023t0001g0089 a0005c0023t0001g0091 a0007c0009t0001g0239 a0007c0009t0001g0242 a0007c0009t0001g0243 a0007c0009t0001g0244 a0007c0009t0001g0247 a0007c0009t0001g0248 a0007c0009t0001g0250 a0007c0009t0001g0254 a0007c0009t0001g0255 a0007c0009t0002g0245 a0007c0009t0002g0253 a0007c0045t0001g0249 a0008c0008t0001g0010 a0008c0008t0001g0029 a0008c0008t0001g0098 a0008c0008t0001g0099 a0008c0008t0001g0101 a0008c0008t0001g0102 a0008c0008t0001g0103 a0008c0008t0001g0105 a0008c0008t0001g0106 a0009c0010t0002g0019 a0009c0010t0002g0036 a0009c0010t0002g0038 a0009c0010t0002g0193 a0009c0010t0002g0222 a0009c0010t0002g0223 a0009c0010t0002g0232 a0009c0051t0001g0200 a0011c0018t0002g0033 a0011c0018t0002g0177 a0011c0018t0002g0260 a0012c0022t0001g0041 a0012c0022t0001g0268 a0013c0028t0001g0018 a0013c0044t0002g0008 a0014c0021t0001g0114 a0014c0021t0002g0112 a0014c0021t0002g0113 a0015c0020t0001g0025 a0015c0020t0001g0057 a0016c0029t0001g0027 a0017c0027t0001g0010 a0017c0027t0001g0100 a0018c0025t0001g0110 a0018c0025t0001g0111 a0019c0026t0001g0266 a0019c0026t0001g0267 a0020c0033t0001g0065 a0020c0047t0001g0067 a0021c0052t0001g0269 a0025c0042t0001g0184 a0026c0035t0001g0085 a0027c0050t0002g0008 a0028c0049t0001g0115 a0029c0046t0002g0221	235	364	0.6456	19	c.53- others(32): Show c.53-475_53-474insAGAGGGGAGGGGGCTCGGG	MADCAM1	ENSG00000099866.16	transcript	ENST00000215637.8	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr19	TogoVar
MAEA_chr4_1284891_1345137	1297461	A A	ATGTGTGT others(12): Show ATGTGTGTGTGTAGTGTGTG	intron_variant intron_variant	MODIFIER	NA18988.hp2 NA18988.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0065 a0001c0002t0001g0065	1	388	0.0026	19	c.69+ others(34): Show c.69+7491_69+7492insGTGTGTGTGTGTGTGTGTA	MAEA	ENSG00000090316.16	transcript	ENST00000303400.9	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr4	TogoVar
MAFF_chr22_38196994_38221507	38198123	A A	AAAAAAAA others(12): Show AAAAAAAAAAATAAATAAAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01070.hp1 HG01192.hp1 HG01070.hp1 HG01192.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	2	388	0.0052	19	c.-41 others(30): Show c.-4121_-4120insAAAAAAAAAATAAATAAAT	MAFF	ENSG00000185022.12	transcript	ENST00000338483.7	protein_coding		3870		chr22	TogoVar
MAFF_chr22_38196994_38221507	38198123	A A	AAAAAAAT others(12): Show AAAAAAATAAATAAATAAAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02895.hp2 HG02897.hp1 HG02895.hp2 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0031 a0001c0001t0006g0031	2	388	0.0052	19	c.-41 others(30): Show c.-4121_-4120insAAAAAATAAATAAATAAAT	MAFF	ENSG00000185022.12	transcript	ENST00000338483.7	protein_coding		3870		chr22	TogoVar
MAGEB10_chrX_27802990_27828014	27809378	A A	ACCCCCCC others(12): Show ACCCCCCCAACCCCGCCAGC	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01891.hp2 HG02922.hp1 HG01243.hp1 HG01891.hp2 HG02922.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0035 a0002c0002t0002g0036 a0002c0002t0002g0037 a0002c0002t0002g0035 a0002c0002t0002g0036 a0002c0002t0002g0037	3	250	0.0120	19	c.-19 others(38): Show c.-199+1347_-199+1365dupCCCAACCCCGCCAGCCCCC	MAGEB10	ENSG00000177689.10	transcript	ENST00000356790.2	protein_coding	1/2		INFO_REALIGN_3_PRIME	chrX	TogoVar
MAGEB10_chrX_27802990_27828014	27809383	C C	CCCAACCC others(12): Show CCCAACCCCGCCAGCCCCCT	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG01169.hp1 HG02258.hp1 HG01168.hp1 HG01169.hp1 HG02258.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0002 a0001c0001t0001 a0003c0003t0002	a0001c0001t0001g0149 a0003c0003t0002g0028 a0001c0001t0001g0149 a0003c0003t0002g0028	3	250	0.0120	19	c.-19 others(38): Show c.-199+1366_-199+1384dupTCCAACCCCGCCAGCCCCC	MAGEB10	ENSG00000177689.10	transcript	ENST00000356790.2	protein_coding	1/2		INFO_REALIGN_3_PRIME	chrX	TogoVar
MAGI1_chr3_65348526_66043918	65395636	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02976.hp2 HG03195.hp1 HG02622.hp2 HG02976.hp2 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0055 a0001c0001t0001g0071 a0001c0001t0005g0076 a0001c0001t0001g0055 a0001c0001t0001g0071 a0001c0001t0005g0076	3	104	0.0289	19	c.220 others(38): Show c.2200-4297_2200-4279dupTTTTTTTTTTTTTTTTTTT	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	13/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65548511	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG03225.hp2 HG01884.hp1 HG03225.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0001 a0001c0001t0001 a0003c0003t0001	a0001c0001t0001g0021 a0003c0003t0001g0012 a0001c0001t0001g0021 a0003c0003t0001g0012	2	104	0.0192	19	c.431 others(38): Show c.431-54899_431-54881dupAAAAAAAAAAAAAAAAAAA	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	2/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65819875	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01496.hp1 HG03195.hp2 others(2): Show HG00741.hp1 HG01496.hp1 HG03195.hp2 HG03927.hp2 HG03942.hp1	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0001 a0002c0002 a0007c0007 a0001c0001 a0002c0002 a0007c0007	a0001c0001t0001 a0002c0002t0001 a0007c0007t0003 a0001c0001t0001 a0002c0002t0001 a0007c0007t0003	a0001c0001t0001g0022 a0001c0001t0001g0042 a0001c0001t0001g0063 others(2): Show a0001c0001t0001g0022 a0001c0001t0001g0042 a0001c0001t0001g0063 a0002c0002t0001g0069 a0007c0007t0003g0062	5	104	0.0481	19	c.314 others(40): Show c.314-197806_314-197788dupTTTTTTTTTTTTTTTTTTT	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	1/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65846976	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0081 a0003c0003t0001g0081	1	104	0.0096	19	c.313 others(40): Show c.313+191001_313+191019dupTTTTTTTTTTTTTTTTTTT	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	1/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65910855	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0056 a0001c0001t0001g0056	1	104	0.0096	19	c.313 others(40): Show c.313+127122_313+127140dupAAAAAAAAAAAAAAAAAAA	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	1/22			chr3	TogoVar
MAGI2_chr7_78012055_79458667	78557080	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01261.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0006 a0001c0003t0006	a0001c0003t0006g0032 a0001c0003t0006g0032	1	40	0.0250	19	c.539 others(38): Show c.539-35454_539-35436dupTTTTTTTTTTTTTTTTTTT	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	3/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	78649235	A A	AAAAAAAA others(12): Show AAAAAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA19240.hp2 NA18522.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0002 a0001c0004t0001 a0001c0001t0002 a0001c0004t0001	a0001c0001t0002g0006 a0001c0004t0001g0016 a0001c0001t0002g0006 a0001c0004t0001g0016	2	40	0.0500	19	c.419 others(38): Show c.419-21997_419-21996insCTTTTTTTTTTTTTTTTTT	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	2/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	79171770	A A	ATATATAT others(12): Show ATATATATATATTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0001 a0001	a0001c0015 a0001c0015	a0001c0015t0001 a0001c0015t0001	a0001c0015t0001g0027 a0001c0015t0001g0027	1	40	0.0250	19	c.302 others(40): Show c.302-164565_302-164564insAAAAAAAAATATATATATA	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	1/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	79171770	A A	ATATATAT others(12): Show ATATATATTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0033 a0001c0001t0002g0033	1	40	0.0250	19	c.302 others(40): Show c.302-164565_302-164564insAAAAAAAAAAAAATATATA	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	1/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	79228354	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0029 a0001c0001t0002g0029	1	40	0.0250	19	c.302 others(40): Show c.302-221149_302-221148insTTTTTTTTTTTTTTTTTTT	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	1/21			chr7	TogoVar
MAGI3_chr1_113385515_113690923	113437806	T T	TCTTCTTC others(12): Show TCTTCTTCTTCTTCTTCTTC	intron_variant intron_variant	MODIFIER	NA19078.hp1 NA19078.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0007 a0001c0002t0002g0007	1	236	0.0042	19	c.316 others(38): Show c.316+46457_316+46458insCTTCTTCTTCTTCTTCTTC	MAGI3	ENSG00000081026.19	transcript	ENST00000307546.14	protein_coding	1/20			chr1	TogoVar
MAGIX_chrX_49157758_49173774	49169081	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp2 NA19082.hp1 NA20129.hp1 HG01891.hp2 NA19082.hp1 NA20129.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0015 a0001c0001 a0006c0015	a0001c0001t0004 a0001c0001t0015 a0006c0015t0001 a0001c0001t0004 a0001c0001t0015 a0006c0015t0001	a0001c0001t0004g0001 a0001c0001t0015g0022 a0006c0015t0001g0006 a0001c0001t0004g0001 a0001c0001t0015g0022 a0006c0015t0001g0006	3	260	0.0115	19	c.26 others(30): Show c.2682_*2683insAAAAAAAAAAAAAAAAAAA	MAGIX	ENSG00000269313.6	transcript	ENST00000595224.6	protein_coding		308		chrX	TogoVar
MAGOH_chr1_53221900_53243518	53237673	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG04228.hp2 NA19001.hp1 NA20129.hp1 HG04228.hp2 NA19001.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145	3	438	0.0069	19	c.88+ others(32): Show c.88+669_88+687dupTTTTTTTTTTTTTTTTTTT	MAGOH	ENSG00000162385.11	transcript	ENST00000371470.8	protein_coding	1/4			chr1	TogoVar
MAGT1_chrX_77820747_77900435	77876165	T T	TATATATA others(12): Show TATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0037 a0001c0001t0001g0037	1	260	0.0039	19	c.103 others(34): Show c.103-569_103-568insTATATATATATATATATAT	MAGT1	ENSG00000102158.22	transcript	ENST00000618282.5	protein_coding	1/9			chrX	TogoVar
MAJIN_chr11_64933230_64977108	64948640	T T	TATATATA others(12): Show TATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01175.hp1 HG01109.hp1 HG01175.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0044 a0001c0001t0001g0068 a0001c0001t0001g0044 a0001c0001t0001g0068	2	384	0.0052	19	c.350 others(34): Show c.350-822_350-821insTATATATATATATATATAT	MAJIN	ENSG00000168070.12	transcript	ENST00000301896.6	protein_coding	6/10			chr11	TogoVar
MAL2_chr8_119203363_119250673	119231856	T T	TCTTGAAC others(12): Show TCTTGAACAGTTGAATTCAC	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02896.hp1 HG02965.hp2 others(2): Show HG02895.hp2 HG02896.hp1 HG02965.hp2 HG03225.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0250 others(2): Show a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0256 a0001c0001t0001g0257	5	382	0.0131	19	c.304 others(36): Show c.304-8308_304-8290dupCTTGAACAGTTGAATTCAC	MAL2	ENSG00000147676.14	transcript	ENST00000614891.5	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr8	TogoVar
MALRD1_chr10_19043801_19739478	19108387	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0097 a0097	a0097c0102 a0097c0102	a0097c0102t0001 a0097c0102t0001	a0097c0102t0001g0098 a0097c0102t0001g0098	1	152	0.0066	19	c.694 others(36): Show c.694+4332_694+4350dupTTTTTTTTTTTTTTTTTTT	MALRD1	ENSG00000204740.11	transcript	ENST00000454679.7	protein_coding	5/39		INFO_REALIGN_3_PRIME	chr10	TogoVar
MALRD1_chr10_19043801_19739478	19163137	T T	TAAAAAAA others(12): Show TAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02717.hp2 HG01109.hp2 HG02717.hp2	a0007 a0046 a0007 a0046	a0007c0008 a0046c0035 a0007c0008 a0046c0035	a0007c0008t0001 a0046c0035t0001 a0007c0008t0001 a0046c0035t0001	a0007c0008t0001g0061 a0046c0035t0001g0126 a0007c0008t0001g0061 a0046c0035t0001g0126	2	152	0.0132	19	c.165 others(38): Show c.1657-2490_1657-2472dupAAAAAAAAAAAAAAAAAAA	MALRD1	ENSG00000204740.11	transcript	ENST00000454679.7	protein_coding	12/39		INFO_REALIGN_3_PRIME	chr10	TogoVar
MALRD1_chr10_19043801_19739478	19176366	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0072 a0072	a0072c0055 a0072c0055	a0072c0055t0001 a0072c0055t0001	a0072c0055t0001g0108 a0072c0055t0001g0108	1	152	0.0066	19	c.195 others(38): Show c.1951+1039_1951+1057dupTTTTTTTTTTTTTTTTTTT	MALRD1	ENSG00000204740.11	transcript	ENST00000454679.7	protein_coding	14/39		INFO_REALIGN_3_PRIME	chr10	TogoVar
MALRD1_chr10_19043801_19739478	19315578	T T	TTATAAAT others(12): Show TTATAAATTATAAATATTTA	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0037 a0037	a0037c0043 a0037c0043	a0037c0043t0002 a0037c0043t0002	a0037c0043t0002g0148 a0037c0043t0002g0148	1	152	0.0066	19	c.342 others(38): Show c.3420-8334_3420-8316dupTATATAAATTATAAATATT	MALRD1	ENSG00000204740.11	transcript	ENST00000454679.7	protein_coding	21/39		INFO_REALIGN_3_PRIME	chr10	TogoVar
MALRD1_chr10_19043801_19739478	19355858	T T	TATATATA others(12): Show TATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01074.hp2 HG01256.hp1 others(6): Show HG00741.hp1 HG01074.hp2 HG01256.hp1 HG01256.hp2 HG02280.hp2 HG02451.hp2 HG02896.hp1 HG03491.hp1 NA18522.hp2	a0001 a0018 a0019 others(5): Show a0001 a0018 a0019 a0030 a0031 a0051 a0074 a0080	a0001c0001 a0018c0017 a0019c0009 others(5): Show a0001c0001 a0018c0017 a0019c0009 a0030c0022 a0031c0122 a0051c0037 a0074c0032 a0080c0053	a0001c0001t0001 a0018c0017t0001 a0019c0009t0002 others(5): Show a0001c0001t0001 a0018c0017t0001 a0019c0009t0002 a0030c0022t0002 a0031c0122t0001 a0051c0037t0001 a0074c0032t0001 a0080c0053t0001	a0001c0001t0001g0009 a0001c0001t0001g0054 a0018c0017t0001g0137 others(6): Show a0001c0001t0001g0009 a0001c0001t0001g0054 a0018c0017t0001g0137 a0019c0009t0002g0070 a0030c0022t0002g0093 a0031c0122t0001g0024 a0051c0037t0001g0121 a0074c0032t0001g0124 a0080c0053t0001g0117	9	152	0.0592	19	c.444 others(38): Show c.4441+3561_4441+3562insATATATATATATATATATA	MALRD1	ENSG00000204740.11	transcript	ENST00000454679.7	protein_coding	26/39			chr10	TogoVar
MALRD1_chr10_19043801_19739478	19547818	A A	ATATATAT others(12): Show ATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18960.hp2 NA18998.hp2 NA18960.hp2 NA18998.hp2	a0007 a0092 a0007 a0092	a0007c0015 a0092c0096 a0007c0015 a0092c0096	a0007c0015t0001 a0092c0096t0001 a0007c0015t0001 a0092c0096t0001	a0007c0015t0001g0109 a0092c0096t0001g0004 a0007c0015t0001g0109 a0092c0096t0001g0004	2	152	0.0132	19	c.547 others(40): Show c.5478+16468_5478+16469insATATATATATATATATATT	MALRD1	ENSG00000204740.11	transcript	ENST00000454679.7	protein_coding	32/39		INFO_REALIGN_3_PRIME	chr10	TogoVar
MALRD1_chr10_19043801_19739478	19547818	A A	ATATATAT others(12): Show ATATATATATATATATATTT	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG01123.hp1	a0025 a0025	a0025c0013 a0025c0013	a0025c0013t0001 a0025c0013t0001	a0025c0013t0001g0118 a0025c0013t0001g0118	1	152	0.0066	19	c.547 others(40): Show c.5478+16468_5478+16469insATATATATATATATATTTT	MALRD1	ENSG00000204740.11	transcript	ENST00000454679.7	protein_coding	32/39		INFO_REALIGN_3_PRIME	chr10	TogoVar

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