Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SLC30A10_chr1_219905445_219933557	219925651	A A	ATATATAT others(12): Show ATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0085 a0001c0001t0085	a0001c0001t0085g0182 a0001c0001t0085g0182	1	426	0.0024	19	c.718 others(36): Show c.718+1376_718+1377insATATATATATATATATATA	SLC30A10	ENSG00000196660.12	transcript	ENST00000366926.4	protein_coding	2/3			chr1	TogoVar
SLC30A10_chr1_219905445_219933557	219925651	A A	ATATATAT others(12): Show ATATATATATATATTTTTTT	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0168 a0001c0001t0004g0168	1	426	0.0024	19	c.718 others(36): Show c.718+1376_718+1377insAAAAAAATATATATATATA	SLC30A10	ENSG00000196660.12	transcript	ENST00000366926.4	protein_coding	2/3			chr1	TogoVar
SLC30A10_chr1_219905445_219933557	219925651	A A	ATATATAT others(12): Show ATATATATATATTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG03486.hp1 NA19240.hp2 HG01243.hp2 HG03486.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0028 a0001c0001t0004 a0001c0001t0028	a0001c0001t0004g0165 a0001c0001t0004g0167 a0001c0001t0028g0166 a0001c0001t0004g0165 a0001c0001t0004g0167 a0001c0001t0028g0166	3	426	0.0070	19	c.718 others(36): Show c.718+1376_718+1377insAAAAAAAAATATATATATA	SLC30A10	ENSG00000196660.12	transcript	ENST00000366926.4	protein_coding	2/3			chr1	TogoVar
SLC30A10_chr1_219905445_219933557	219925652	T T	TATATATA others(12): Show TATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01943.hp2 HG02083.hp1 HG01081.hp2 HG01943.hp2 HG02083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0012 a0001c0001t0066 a0001c0001t0010 a0001c0001t0012 a0001c0001t0066	a0001c0001t0010g0091 a0001c0001t0012g0054 a0001c0001t0066g0118 a0001c0001t0010g0091 a0001c0001t0012g0054 a0001c0001t0066g0118	3	426	0.0070	19	c.718 others(36): Show c.718+1375_718+1376insTATATATATATATATATAT	SLC30A10	ENSG00000196660.12	transcript	ENST00000366926.4	protein_coding	2/3			chr1	TogoVar
SLC30A1_chr1_211566568_211584161	211581748	T T	TAAACCCA others(12): Show TAAACCCAGCATACTTTAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0011 a0001c0001t0007g0011	1	436	0.0023	19	c.-31 others(30): Show c.-3137_-3136insTTTAAAGTATGCTGGGTTT	SLC30A1	ENSG00000170385.10	transcript	ENST00000367001.5	protein_coding		2588		chr1	TogoVar
SLC30A5_chr5_69089014_69136069	69125870	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG03453.hp1 HG03486.hp2 others(1): Show HG01433.hp1 HG03453.hp1 HG03486.hp2 NA19054.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0009 a0001c0001t0002 a0001c0001t0005 a0001c0001t0009	a0001c0001t0002g0010 a0001c0001t0005g0221 a0001c0001t0009g0223 a0001c0001t0002g0010 a0001c0001t0005g0221 a0001c0001t0009g0223	4	408	0.0098	19	c.199 others(38): Show c.1999-2126_1999-2108dupAAAAAAAAAAAAAAAAAAA	SLC30A5	ENSG00000145740.20	transcript	ENST00000396591.8	protein_coding	14/15		INFO_REALIGN_3_PRIME	chr5	TogoVar
SLC33A1_chr3_155816024_155859427	155836280	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02970.hp1 HG02258.hp1 HG02970.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0007 a0002c0002t0007	a0002c0002t0007g0324 a0002c0002t0007g0331 a0002c0002t0007g0324 a0002c0002t0007g0331	2	392	0.0051	19	c.964 others(36): Show c.964-2258_964-2240dupTTTTTTTTTTTTTTTTTTT	SLC33A1	ENSG00000169359.16	transcript	ENST00000643144.2	protein_coding	2/5			chr3	TogoVar
SLC35A3_chr1_99964996_100040634	99995161	T T	TTTCTTTC others(12): Show TTTCTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0024 a0001c0002t0024	a0001c0002t0024g0166 a0001c0002t0024g0166	1	192	0.0052	19	c.187 others(36): Show c.187+1422_187+1423insCTTTCTTTCTTTCTTTCTT	SLC35A3	ENSG00000117620.15	transcript	ENST00000533028.8	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr1	TogoVar
SLC35B3_chr6_8406435_8440545	8409469	A A	ATATATAT others(12): Show ATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp1 HG00642.hp2 HG00642.hp1 HG00642.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0018 a0001c0001t0001g0026 a0001c0001t0001g0018 a0001c0001t0001g0026	2	412	0.0049	19	c.40 others(30): Show c.4079_*4080insATATATATATATATATATA	SLC35B3	ENSG00000124786.13	transcript	ENST00000710437.1	protein_coding		1965		chr6	TogoVar
SLC35C2_chr20_46340984_46369425	46352664	C C	CGATGGGA others(12): Show CGATGGGATCCTAGCGGGAT	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00733.hp1 HG01081.hp1 others(6): Show HG00423.hp2 HG00733.hp1 HG01081.hp1 HG01255.hp1 HG01346.hp2 HG01358.hp1 HG01517.hp2 HG03704.hp2 HG03831.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0008 a0001c0001t0001g0087 a0001c0001t0001g0094 others(1): Show a0001c0001t0001g0008 a0001c0001t0001g0087 a0001c0001t0001g0094 a0001c0001t0004g0119	9	398	0.0226	19	c.662 others(34): Show c.662-439_662-438insATCCCGCTAGGATCCCATC	SLC35C2	ENSG00000080189.15	transcript	ENST00000372230.10	protein_coding	7/9			chr20	TogoVar
SLC35D2_chr9_96315710_96388711	96324549	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01515.hp2 HG01517.hp2 HG02257.hp2 HG01515.hp2 HG01517.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0009 a0001c0001 a0001c0009	a0001c0001t0001 a0001c0009t0001 a0001c0001t0001 a0001c0009t0001	a0001c0001t0001g0181 a0001c0001t0001g0184 a0001c0009t0001g0281 a0001c0001t0001g0181 a0001c0001t0001g0184 a0001c0009t0001g0281	3	284	0.0106	19	c.753 others(34): Show c.753-381_753-380insAAAAAAAAAAAAAAAAAAA	SLC35D2	ENSG00000130958.13	transcript	ENST00000253270.13	protein_coding	9/11			chr9	TogoVar
SLC35D2_chr9_96315710_96388711	96358078	T T	TATATATA others(12): Show TATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0274 a0001c0001t0001g0274	1	284	0.0035	19	c.347 others(36): Show c.347+2075_347+2076insTATATATATATATATATAT	SLC35D2	ENSG00000130958.13	transcript	ENST00000253270.13	protein_coding	4/11			chr9	TogoVar
SLC35F1_chr6_117902264_118322671	118182563	G G	GGAAGGAA others(12): Show GGAAGGAAGGAAGGAAGGAA	intron_variant intron_variant	MODIFIER	HG03834.hp1 HG03834.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0005 a0001c0001t0005g0005	1	182	0.0055	19	c.349 others(38): Show c.349+27943_349+27944insGAAGGAAGGAAGGAAGGAA	SLC35F1	ENSG00000196376.11	transcript	ENST00000360388.9	protein_coding	2/7			chr6	TogoVar
SLC35F1_chr6_117902264_118322671	118322185	T T	TGTGTGTG others(12): Show TGTGTGTGTGTGTGTGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04204.hp2 HG04204.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0035 a0001c0001t0035	a0001c0001t0035g0146 a0001c0001t0035g0146	1	182	0.0055	19	c.79 others(30): Show c.7933_*7934insGTGTGTGTGTGTGTGTGTG	SLC35F1	ENSG00000196376.11	transcript	ENST00000360388.9	protein_coding		4515		chr6	TogoVar
SLC35F2_chr11_107785991_107863787	107802242	A A	AAAAAAAA others(12): Show AAAAAAAAAAAAAAATAAAT	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG03209.hp2 HG06807.hp2 HG02280.hp1 HG03209.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0119 a0001c0001t0005g0273 a0001c0001t0005g0274 a0001c0001t0005g0119 a0001c0001t0005g0273 a0001c0001t0005g0274	3	342	0.0088	19	c.939 others(34): Show c.939+758_939+759insATTTATTTTTTTTTTTTTT	SLC35F2	ENSG00000110660.15	transcript	ENST00000525815.6	protein_coding	7/7			chr11	TogoVar
SLC35F2_chr11_107785991_107863787	107802242	A A	AAAAAAAA others(12): Show AAAAAAAAAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00609.hp1 HG01175.hp2 others(22): Show HG00558.hp1 HG00609.hp1 HG01175.hp2 HG01257.hp2 HG02027.hp2 HG02080.hp1 HG02486.hp2 HG02559.hp2 HG02698.hp2 HG03831.hp2 HG04184.hp2 NA18966.hp1 NA18970.hp2 NA18973.hp1 NA18977.hp2 NA18981.hp1 NA19006.hp2 NA19010.hp1 NA19056.hp1 NA19064.hp1 NA19066.hp1 NA19070.hp1 NA19079.hp2 NA19084.hp2 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0010 a0001c0001t0017 others(3): Show a0001c0001t0005 a0001c0001t0010 a0001c0001t0017 a0001c0001t0027 a0001c0001t0030 a0001c0001t0031	a0001c0001t0005g0167 a0001c0001t0005g0170 a0001c0001t0005g0171 others(22): Show a0001c0001t0005g0167 a0001c0001t0005g0170 a0001c0001t0005g0171 a0001c0001t0005g0256 a0001c0001t0005g0259 a0001c0001t0005g0262 a0001c0001t0005g0263 a0001c0001t0005g0266 a0001c0001t0005g0268 a0001c0001t0005g0269 a0001c0001t0005g0278 a0001c0001t0005g0279 a0001c0001t0005g0303 a0001c0001t0005g0325 a0001c0001t0010g0169 a0001c0001t0010g0181 a0001c0001t0010g0199 a0001c0001t0010g0226 a0001c0001t0010g0254 a0001c0001t0010g0267 a0001c0001t0010g0272 a0001c0001t0017g0264 a0001c0001t0027g0277 a0001c0001t0030g0271 a0001c0001t0031g0276	25	342	0.0731	19	c.939 others(34): Show c.939+758_939+759insATTTATTTATTTTTTTTTT	SLC35F2	ENSG00000110660.15	transcript	ENST00000525815.6	protein_coding	7/7			chr11	TogoVar
SLC35F2_chr11_107785991_107863787	107802242	A A	AAAAAAAT others(12): Show AAAAAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG02523.hp2 HG02683.hp1 HG02523.hp2 HG02683.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0029 a0001c0001t0017 a0001c0001t0029	a0001c0001t0017g0250 a0001c0001t0029g0255 a0001c0001t0017g0250 a0001c0001t0029g0255	2	342	0.0059	19	c.939 others(34): Show c.939+758_939+759insATTTATTTATTTATTTTTT	SLC35F2	ENSG00000110660.15	transcript	ENST00000525815.6	protein_coding	7/7			chr11	TogoVar
SLC35F2_chr11_107785991_107863787	107820275	T T	TGGGAGAG others(12): Show TGGGAGAGAGAGAAAAGAAA	intron_variant intron_variant	MODIFIER	HG01952.hp2 HG03579.hp2 HG06807.hp1 others(1): Show HG01952.hp2 HG03579.hp2 HG06807.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0013 a0001c0001t0009 a0001c0001t0013	a0001c0001t0009g0116 a0001c0001t0009g0134 a0001c0001t0009g0335 others(1): Show a0001c0001t0009g0116 a0001c0001t0009g0134 a0001c0001t0009g0335 a0001c0001t0013g0336	4	342	0.0117	19	c.111 others(36): Show c.111-4329_111-4311dupTTTCTTTTCTCTCTCTCCC	SLC35F2	ENSG00000110660.15	transcript	ENST00000525815.6	protein_coding	1/7			chr11	TogoVar
SLC35F2_chr11_107785991_107863787	107842257	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02897.hp1 HG02895.hp1 HG02897.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0004 a0004c0004t0004	a0004c0004t0004g0252 a0004c0004t0004g0253 a0004c0004t0004g0252 a0004c0004t0004g0253	2	342	0.0059	19	c.110 others(38): Show c.110+16382_110+16400dupTTTTTTTTTTTTTTTTTTT	SLC35F2	ENSG00000110660.15	transcript	ENST00000525815.6	protein_coding	1/7			chr11	TogoVar
SLC35F3_chr1_233899676_234329511	234058328	A A	ATTTTTTT others(12): Show ATTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02965.hp2 NA19240.hp2 HG02965.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0005 a0001c0001t0001 a0001c0002t0005	a0001c0001t0001g0090 a0001c0002t0005g0146 a0001c0001t0001g0090 a0001c0002t0005g0146	2	158	0.0127	19	c.283 others(40): Show c.283+152582_283+152600dupTTTTTTTTTTTTTTTTTTT	SLC35F3	ENSG00000183780.13	transcript	ENST00000366618.8	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr1	TogoVar
SLC35F3_chr1_233899676_234329511	234075755	A A	AGCTGCCT others(12): Show AGCTGCCTTTCCTTTTGTTC	intron_variant intron_variant	MODIFIER	HG01516.hp2 HG02257.hp2 HG03579.hp1 HG01516.hp2 HG02257.hp2 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0048 a0001c0001t0001g0081 a0001c0001t0001g0103 a0001c0001t0001g0048 a0001c0001t0001g0081 a0001c0001t0001g0103	3	158	0.0190	19	c.284 others(40): Show c.284-155661_284-155643dupGCTGCCTTTCCTTTTGTTC	SLC35F3	ENSG00000183780.13	transcript	ENST00000366618.8	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr1	TogoVar
SLC35F3_chr1_233899676_234329511	234081904	A A	ATTTTTTT others(12): Show ATTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp2 NA18522.hp2 HG02559.hp2 NA18522.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0008 a0001c0002t0002 a0001c0002t0008	a0001c0002t0002g0138 a0001c0002t0008g0151 a0001c0002t0002g0138 a0001c0002t0008g0151	2	158	0.0127	19	c.284 others(40): Show c.284-149499_284-149481dupTTTTTTTTTTTTTTTTTTT	SLC35F3	ENSG00000183780.13	transcript	ENST00000366618.8	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr1	TogoVar
SLC35F6_chr2_26759284_26786231	26784448	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp1 HG02135.hp1 HG03492.hp2 others(1): Show HG01243.hp1 HG02135.hp1 HG03492.hp2 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0001 a0001c0001t0008	a0001c0001t0001g0001 a0001c0001t0001g0082 a0001c0001t0008g0086 a0001c0001t0001g0001 a0001c0001t0001g0082 a0001c0001t0008g0086	4	302	0.0133	19	c.59 others(30): Show c.5937_*5938insTTTTTTTTTTTTTTTTTTT	SLC35F6	ENSG00000213699.9	transcript	ENST00000344420.10	protein_coding		3218		chr2	TogoVar
SLC36A1_chr5_151442603_151497379	151468266	A A	AAATATAT others(12): Show AAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0104 a0001c0001t0005g0104	1	404	0.0025	19	c.723 others(34): Show c.723+342_723+343insATATATATATATATATATA	SLC36A1	ENSG00000123643.14	transcript	ENST00000243389.8	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr5	TogoVar
SLC37A1_chr21_42508852_42586426	42530654	A A	ACACACAC others(12): Show ACACACACCCCCCCCCCCCC	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG01934.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0175 a0001c0001t0001g0175	1	356	0.0028	19	c.139 others(36): Show c.139-4043_139-4042insACACACCCCCCCCCCCCCC	SLC37A1	ENSG00000160190.14	transcript	ENST00000352133.3	protein_coding	3/19		INFO_REALIGN_3_PRIME	chr21	TogoVar
SLC37A1_chr21_42508852_42586426	42579528	T T	TCATCAGA others(12): Show TCATCAGACAGCCCTGCCCA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00609.hp2 HG00639.hp2 others(27): Show HG00099.hp1 HG00609.hp2 HG00639.hp2 HG00642.hp1 HG00735.hp2 HG01069.hp2 HG01109.hp2 HG01175.hp2 HG01243.hp2 HG01358.hp2 HG01496.hp2 HG01515.hp2 HG01517.hp2 HG01891.hp2 HG02074.hp1 HG02109.hp2 HG02129.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp2 HG02622.hp2 HG03098.hp1 HG03195.hp2 HG03225.hp2 HG03471.hp1 HG03486.hp2 HG03579.hp1 NA18964.hp2 NA19030.hp1 NA20805.hp2	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0001 a0001c0003 a0001c0004 others(4): Show a0001c0001 a0001c0003 a0001c0004 a0001c0008 a0001c0018 a0003c0005 a0005c0006	a0001c0001t0001 a0001c0001t0009 a0001c0001t0044 others(12): Show a0001c0001t0001 a0001c0001t0009 a0001c0001t0044 a0001c0003t0005 a0001c0003t0015 a0001c0003t0016 a0001c0003t0018 a0001c0003t0030 a0001c0003t0038 a0001c0004t0001 a0001c0004t0005 a0001c0008t0005 a0001c0018t0005 a0003c0005t0016 a0005c0006t0018	a0001c0001t0001g0068 a0001c0001t0001g0071 a0001c0001t0009g0309 others(25): Show a0001c0001t0001g0068 a0001c0001t0001g0071 a0001c0001t0009g0309 a0001c0001t0044g0042 a0001c0003t0005g0229 a0001c0003t0005g0230 a0001c0003t0005g0231 a0001c0003t0015g0019 a0001c0003t0015g0198 a0001c0003t0015g0205 a0001c0003t0016g0197 a0001c0003t0016g0202 a0001c0003t0016g0203 a0001c0003t0018g0016 a0001c0003t0030g0293 a0001c0003t0030g0294 a0001c0003t0038g0204 a0001c0004t0001g0156 a0001c0004t0005g0135 a0001c0004t0005g0163 a0001c0004t0005g0164 a0001c0004t0005g0165 a0001c0008t0005g0232 a0001c0008t0005g0233 a0001c0008t0005g0234 a0001c0018t0005g0087 a0003c0005t0016g0189 a0005c0006t0018g0080	30	356	0.0843	19	c.152 others(36): Show c.1522-205_1522-187dupTCAGACAGCCCTGCCCACA	SLC37A1	ENSG00000160190.14	transcript	ENST00000352133.3	protein_coding	18/19		INFO_REALIGN_3_PRIME	chr21	TogoVar
SLC37A3_chr7_140328752_140403530	140361492	T T	TCCCTCTC others(12): Show TCCCTCTCCCTCTCCCTCTC	intron_variant intron_variant	MODIFIER	NA18939.hp1 NA18939.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0030 a0001c0001t0001g0030	1	346	0.0029	19	c.376 others(36): Show c.376-2708_376-2707insGAGAGGGAGAGGGAGAGGG	SLC37A3	ENSG00000157800.18	transcript	ENST00000326232.14	protein_coding	5/14			chr7	TogoVar
SLC37A3_chr7_140328752_140403530	140361496	T T	TCTCCCTC others(12): Show TCTCCCTCTCCCTCTCCCTC	intron_variant intron_variant	MODIFIER	NA19058.hp2 NA19058.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0035 a0001c0001t0001g0035	1	346	0.0029	19	c.376 others(36): Show c.376-2712_376-2711insGAGGGAGAGGGAGAGGGAG	SLC37A3	ENSG00000157800.18	transcript	ENST00000326232.14	protein_coding	5/14			chr7	TogoVar
SLC37A3_chr7_140328752_140403530	140361497	C C	CTCCCTCT others(12): Show CTCCCTCTCCCTCTCCCTCT	intron_variant intron_variant	MODIFIER	NA18991.hp1 NA18991.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0164 a0001c0001t0001g0164	1	346	0.0029	19	c.376 others(36): Show c.376-2713_376-2712insAGAGGGAGAGGGAGAGGGA	SLC37A3	ENSG00000157800.18	transcript	ENST00000326232.14	protein_coding	5/14			chr7	TogoVar
SLC37A3_chr7_140328752_140403530	140361502	T T	TCTCCCTC others(12): Show TCTCCCTCTCCCTCCCCCTC	intron_variant intron_variant	MODIFIER	HG02738.hp1 HG02738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0248 a0001c0001t0001g0248	1	346	0.0029	19	c.376 others(36): Show c.376-2718_376-2717insGAGGGGGAGGGAGAGGGAG	SLC37A3	ENSG00000157800.18	transcript	ENST00000326232.14	protein_coding	5/14			chr7	TogoVar
SLC38A10_chr17_81239811_81300307	81247458	T T	TGGTTATC others(12): Show TGGTTATCTGGGCTGGGTGG	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG01169.hp2	a0001 a0001	a0001c0022 a0001c0022	a0001c0022t0001 a0001c0022t0001	a0001c0022t0001g0052 a0001c0022t0001g0052	1	214	0.0047	19	c.206 others(36): Show c.2066-416_2066-398dupCCACCCAGCCCAGATAACC	SLC38A10	ENSG00000157637.13	transcript	ENST00000374759.8	protein_coding	14/15			chr17	TogoVar
SLC38A1_chr12_46178063_46274043	46178307	C C	CGTTGGGG others(12): Show CGTTGGGGGAAAGTGAGAGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00438.hp1 HG00639.hp1 HG01074.hp1 others(38): Show HG00438.hp1 HG00639.hp1 HG01074.hp1 HG01081.hp1 HG01261.hp1 HG01433.hp2 HG01496.hp1 HG01978.hp1 HG02132.hp1 HG02135.hp1 HG02300.hp1 HG02602.hp2 HG02683.hp1 HG02717.hp2 HG03225.hp1 HG03490.hp2 NA18906.hp2 NA18941.hp1 NA18949.hp1 NA18953.hp1 NA18956.hp1 NA18962.hp2 NA18963.hp1 NA18964.hp1 NA18965.hp2 NA18966.hp1 NA18969.hp2 NA18983.hp2 NA18999.hp2 NA19000.hp1 NA19007.hp2 NA19056.hp2 NA19057.hp1 NA19058.hp1 NA19064.hp1 NA19066.hp2 NA19068.hp1 NA19078.hp1 NA19082.hp2 NA19088.hp1 NA20129.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0012 a0003c0005 a0001c0001 a0001c0012 a0003c0005	a0001c0001t0005 a0001c0001t0011 a0001c0001t0017 others(14): Show a0001c0001t0005 a0001c0001t0011 a0001c0001t0017 a0001c0001t0019 a0001c0001t0021 a0001c0001t0029 a0001c0001t0047 a0001c0001t0050 a0001c0001t0056 a0001c0001t0087 a0001c0001t0090 a0001c0001t0092 a0001c0001t0105 a0001c0001t0109 a0001c0001t0113 a0001c0012t0005 a0003c0005t0051	a0001c0001t0005g0001 a0001c0001t0005g0036 a0001c0001t0005g0038 others(32): Show a0001c0001t0005g0001 a0001c0001t0005g0036 a0001c0001t0005g0038 a0001c0001t0005g0040 a0001c0001t0005g0049 a0001c0001t0005g0051 a0001c0001t0005g0106 a0001c0001t0005g0109 a0001c0001t0011g0151 a0001c0001t0011g0173 a0001c0001t0011g0185 a0001c0001t0011g0241 a0001c0001t0011g0246 a0001c0001t0011g0250 a0001c0001t0011g0277 a0001c0001t0011g0281 a0001c0001t0017g0004 a0001c0001t0017g0037 a0001c0001t0019g0227 a0001c0001t0019g0229 a0001c0001t0021g0016 a0001c0001t0021g0253 a0001c0001t0029g0030 a0001c0001t0029g0044 a0001c0001t0047g0073 a0001c0001t0050g0050 a0001c0001t0056g0041 a0001c0001t0087g0252 a0001c0001t0090g0276 a0001c0001t0092g0259 a0001c0001t0105g0249 a0001c0001t0109g0261 a0001c0001t0113g0157 a0001c0012t0005g0093 a0003c0005t0051g0039	41	330	0.1242	19	c.10 others(32): Show c.10662_*10663insCCTCTCACTTTCCCCCAAC	SLC38A1	ENSG00000111371.16	transcript	ENST00000398637.10	protein_coding		4755		chr12	TogoVar
SLC38A1_chr12_46178063_46274043	46269507	G G	GCGGGCAG others(12): Show GCGGGCAGCGCCTGGGACTA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01074.hp1 HG01074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0113 a0001c0001t0113	a0001c0001t0113g0157 a0001c0001t0113g0157	1	330	0.0030	19	c.-12 others(30): Show c.-1209_-1191dupTAGTCCCAGGCGCTGCCCG	SLC38A1	ENSG00000111371.16	transcript	ENST00000398637.10	protein_coding		465		chr12	TogoVar
SLC38A9_chr5_55620848_55717324	55677923	T T	TGTGTGTG others(12): Show TGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00280.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0240 a0002c0002t0001g0240	1	350	0.0029	19	c.114 others(36): Show c.114-5229_114-5228insCACACACACACACACACAC	SLC38A9	ENSG00000177058.12	transcript	ENST00000396865.7	protein_coding	3/15			chr5	TogoVar
SLC38A9_chr5_55620848_55717324	55677926	T T	TGTGTGTG others(12): Show TGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01952.hp2 HG01261.hp2 HG01952.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0282 a0002c0002t0001g0340 a0002c0002t0001g0282 a0002c0002t0001g0340	2	350	0.0057	19	c.114 others(36): Show c.114-5232_114-5231insCACACACACACACACACAC	SLC38A9	ENSG00000177058.12	transcript	ENST00000396865.7	protein_coding	3/15			chr5	TogoVar
SLC39A11_chr17_72640949_73097688	72665389	G G	GTTTTTTT others(12): Show GTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG03927.hp1 HG01346.hp2 HG03927.hp1	a0001 a0001	a0001c0001 a0001c0022 a0001c0001 a0001c0022	a0001c0001t0004 a0001c0022t0001 a0001c0001t0004 a0001c0022t0001	a0001c0001t0004g0058 a0001c0022t0001g0175 a0001c0001t0004g0058 a0001c0022t0001g0175	2	180	0.0111	19	c.672 others(38): Show c.672-16140_672-16122dupAAAAAAAAAAAAAAAAAAA	SLC39A11	ENSG00000133195.12	transcript	ENST00000255559.8	protein_coding	7/9			chr17	TogoVar
SLC39A11_chr17_72640949_73097688	72729457	A A	ATATATAT others(12): Show ATATATATTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG03130.hp2 HG01081.hp1 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0005 a0001c0001t0003 a0001c0001t0005	a0001c0001t0003g0025 a0001c0001t0005g0054 a0001c0001t0003g0025 a0001c0001t0005g0054	2	180	0.0111	19	c.671 others(36): Show c.671+7192_671+7193insAAAAAAAAAAAAATATATA	SLC39A11	ENSG00000133195.12	transcript	ENST00000255559.8	protein_coding	7/9			chr17	TogoVar
SLC39A11_chr17_72640949_73097688	72729457	A A	ATATATTT others(12): Show ATATATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG02486.hp1 HG01496.hp1 HG02486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0009 a0001c0001t0005 a0001c0001t0009	a0001c0001t0005g0145 a0001c0001t0009g0034 a0001c0001t0005g0145 a0001c0001t0009g0034	2	180	0.0111	19	c.671 others(36): Show c.671+7192_671+7193insAAAAAAAAAAAAAAATATA	SLC39A11	ENSG00000133195.12	transcript	ENST00000255559.8	protein_coding	7/9			chr17	TogoVar
SLC39A11_chr17_72640949_73097688	72729457	A A	ATATTTTT others(12): Show ATATTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0003 a0003	a0003c0012 a0003c0012	a0003c0012t0001 a0003c0012t0001	a0003c0012t0001g0084 a0003c0012t0001g0084	1	180	0.0056	19	c.671 others(36): Show c.671+7192_671+7193insAAAAAAAAAAAAAAAAATA	SLC39A11	ENSG00000133195.12	transcript	ENST00000255559.8	protein_coding	7/9			chr17	TogoVar
SLC39A11_chr17_72640949_73097688	72809228	T T	TCTCTCTC others(12): Show TCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0119 a0001c0001t0001g0119	1	180	0.0056	19	c.601 others(38): Show c.601+40405_601+40406insGAGAGAGAGAGAGAGAGAG	SLC39A11	ENSG00000133195.12	transcript	ENST00000255559.8	protein_coding	6/9			chr17	TogoVar
SLC39A11_chr17_72640949_73097688	72852204	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG04115.hp2 HG04115.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0075 a0003c0003t0002g0075	1	180	0.0056	19	c.431 others(36): Show c.431-2419_431-2401dupTTTTTTTTTTTTTTTTTTT	SLC39A11	ENSG00000133195.12	transcript	ENST00000255559.8	protein_coding	5/9			chr17	TogoVar
SLC39A11_chr17_72640949_73097688	72882794	C C	CTTCTTTT others(12): Show CTTCTTTTTTTTTTTTCTTT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG02129.hp2 HG02622.hp2 others(1): Show HG00639.hp2 HG02129.hp2 HG02622.hp2 HG02735.hp2	a0001 a0003 a0008 a0001 a0003 a0008	a0001c0001 a0003c0003 a0008c0024 a0001c0001 a0003c0003 a0008c0024	a0001c0001t0004 a0001c0001t0014 a0003c0003t0001 others(1): Show a0001c0001t0004 a0001c0001t0014 a0003c0003t0001 a0008c0024t0007	a0001c0001t0004g0113 a0001c0001t0014g0121 a0003c0003t0001g0131 others(1): Show a0001c0001t0004g0113 a0001c0001t0014g0121 a0003c0003t0001g0131 a0008c0024t0007g0093	4	180	0.0222	19	c.431 others(38): Show c.431-32991_431-32990insAAAGAAAAAAAAAAAAGAA	SLC39A11	ENSG00000133195.12	transcript	ENST00000255559.8	protein_coding	5/9			chr17	TogoVar
SLC39A11_chr17_72640949_73097688	72882798	T T	TTTTTTTT others(12): Show TTTTTTTTTTTTTCTTTTTC	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG03139.hp1 HG02572.hp2 HG03139.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0009 a0002c0004t0001 a0001c0001t0009 a0002c0004t0001	a0001c0001t0009g0057 a0002c0004t0001g0060 a0001c0001t0009g0057 a0002c0004t0001g0060	2	180	0.0111	19	c.431 others(38): Show c.431-32995_431-32994insGAAAAAGAAAAAAAAAAAA	SLC39A11	ENSG00000133195.12	transcript	ENST00000255559.8	protein_coding	5/9			chr17	TogoVar
SLC39A11_chr17_72640949_73097688	72882799	T T	TTTTTTTT others(12): Show TTTTTTTTTTTTTCTTTTTC	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01106.hp1 HG01243.hp1 others(6): Show HG00639.hp1 HG01106.hp1 HG01243.hp1 HG01255.hp1 HG01258.hp2 HG02572.hp1 HG02922.hp2 HG03098.hp1 NA18946.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0005 a0001c0019 others(3): Show a0001c0001 a0001c0005 a0001c0019 a0002c0002 a0002c0004 a0003c0007	a0001c0001t0002 a0001c0001t0006 a0001c0005t0002 others(6): Show a0001c0001t0002 a0001c0001t0006 a0001c0005t0002 a0001c0005t0003 a0001c0019t0003 a0002c0002t0003 a0002c0002t0018 a0002c0004t0003 a0003c0007t0002	a0001c0001t0002g0001 a0001c0001t0006g0033 a0001c0005t0002g0048 others(6): Show a0001c0001t0002g0001 a0001c0001t0006g0033 a0001c0005t0002g0048 a0001c0005t0003g0017 a0001c0019t0003g0002 a0002c0002t0003g0122 a0002c0002t0018g0077 a0002c0004t0003g0041 a0003c0007t0002g0129	9	180	0.0500	19	c.431 others(38): Show c.431-32996_431-32995insGAAAAAGAAAAAAAAAAAA	SLC39A11	ENSG00000133195.12	transcript	ENST00000255559.8	protein_coding	5/9			chr17	TogoVar
SLC39A11_chr17_72640949_73097688	73062475	A A	AAAAAAAA others(12): Show AAAAAAAAAAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01255.hp2 HG02258.hp2 others(7): Show HG00639.hp2 HG01255.hp2 HG02258.hp2 HG02486.hp1 HG02630.hp2 HG03486.hp2 HG03516.hp2 HG03927.hp1 HG04115.hp2 NA19057.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0005 a0001c0015 others(3): Show a0001c0001 a0001c0005 a0001c0015 a0001c0018 a0001c0022 a0003c0003	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(7): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0005t0001 a0001c0015t0001 a0001c0018t0006 a0001c0022t0001 a0003c0003t0002	a0001c0001t0001g0016 a0001c0001t0003g0029 a0001c0001t0004g0113 others(7): Show a0001c0001t0001g0016 a0001c0001t0003g0029 a0001c0001t0004g0113 a0001c0001t0005g0145 a0001c0001t0008g0153 a0001c0005t0001g0111 a0001c0015t0001g0064 a0001c0018t0006g0169 a0001c0022t0001g0175 a0003c0003t0002g0075	10	180	0.0556	19	c.147 others(38): Show c.147+22332_147+22333insGTTTTTTTTTTTTTTTTTT	SLC39A11	ENSG00000133195.12	transcript	ENST00000255559.8	protein_coding	3/9			chr17	TogoVar
SLC39A14_chr8_22362278_22427736	22423786	T T	TCTCTCTC others(12): Show TCTCTCTCTCTCTCTCTCTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0003 a0003	a0003c0001 a0003c0001	a0003c0001t0001 a0003c0001t0001	a0003c0001t0001g0075 a0003c0001t0001g0075	1	324	0.0031	19	c.40 others(30): Show c.4088_*4089insCTCTCTCTCTCTCTCTCTC	SLC39A14	ENSG00000104635.15	transcript	ENST00000359741.10	protein_coding		1051		chr8	TogoVar
SLC39A6_chr18_36103531_36134340	36104929	G G	GTCTATCA others(12): Show GTCTATCATCTATCTATCTA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00558.hp1 NA18960.hp1 NA18974.hp2 others(2): Show HG00558.hp1 NA18960.hp1 NA18974.hp2 NA18987.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0113 a0001c0001t0001g0142 a0001c0001t0001g0001 a0001c0001t0001g0113 a0001c0001t0001g0142	5	410	0.0122	19	c.46 others(30): Show c.4663_*4664insTAGATAGATAGATGATAGA	SLC39A6	ENSG00000141424.13	transcript	ENST00000269187.10	protein_coding		3601		chr18	TogoVar
SLC41A2_chr12_104796801_104963290	104853911	A A	ATTATTAT others(12): Show ATTATTATTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG00673.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0269 a0001c0001t0001g0269	1	386	0.0026	19	c.125 others(38): Show c.1255+7379_1255+7380insAAAAAAAAAAAAATAATAA	SLC41A2	ENSG00000136052.10	transcript	ENST00000258538.8	protein_coding	8/10			chr12	TogoVar
SLC41A2_chr12_104796801_104963290	104932624	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00597.hp2 NA18967.hp2 HG00597.hp2 NA18967.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0013 a0001c0002t0006 a0001c0002t0013	a0001c0002t0006g0040 a0001c0002t0013g0376 a0001c0002t0006g0040 a0001c0002t0013g0376	2	386	0.0052	19	c.-16 others(38): Show c.-167-3949_-167-3931dupTTTTTTTTTTTTTTTTTTT	SLC41A2	ENSG00000136052.10	transcript	ENST00000258538.8	protein_coding	1/10			chr12	TogoVar
SLC43A2_chr17_1564268_1633834	1600152	A A	ATATATAT others(12): Show ATATATATATATATATATTT	intron_variant intron_variant	MODIFIER	HG02809.hp1 NA20300.hp1 HG02809.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0082 a0001c0003t0003 a0001c0001t0082 a0001c0003t0003	a0001c0001t0082g0379 a0001c0003t0003g0201 a0001c0001t0082g0379 a0001c0003t0003g0201	2	382	0.0052	19	c.502 others(36): Show c.502-6874_502-6873insAAATATATATATATATATA	SLC43A2	ENSG00000167703.15	transcript	ENST00000301335.10	protein_coding	5/13			chr17	TogoVar

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