Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SMURF2_chr17_64537282_64667307	64566561	G G	GTTTTTTT others(12): Show GTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18945.hp1 NA18945.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0119 a0001c0001t0014g0119	1	174	0.0058	19	c.101 others(38): Show c.1017-3614_1017-3596dupAAAAAAAAAAAAAAAAAAA	SMURF2	ENSG00000108854.16	transcript	ENST00000262435.14	protein_coding	10/18			chr17	TogoVar
SMURF2_chr17_64537282_64667307	64662373	A A	AGGCGGGG others(12): Show AGGCGGGGCCGGCGGGGCGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp1 HG01346.hp1 HG01884.hp1 others(22): Show HG01243.hp1 HG01346.hp1 HG01884.hp1 HG01891.hp1 HG02109.hp1 HG02109.hp2 HG02451.hp2 HG02486.hp2 HG02559.hp2 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02717.hp2 HG02818.hp2 HG02896.hp1 HG03041.hp1 HG03041.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03579.hp2 NA20129.hp2 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0002c0004	a0001c0001t0010 a0001c0001t0025 a0001c0001t0026 others(8): Show a0001c0001t0010 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0029 a0001c0001t0043 a0001c0002t0004 a0001c0002t0020 a0001c0003t0002 a0001c0003t0005 a0002c0004t0013	a0001c0001t0010g0018 a0001c0001t0025g0001 a0001c0001t0026g0020 others(22): Show a0001c0001t0010g0018 a0001c0001t0025g0001 a0001c0001t0026g0020 a0001c0001t0027g0021 a0001c0001t0029g0022 a0001c0001t0043g0144 a0001c0002t0004g0006 a0001c0002t0004g0007 a0001c0002t0004g0008 a0001c0002t0004g0009 a0001c0002t0004g0010 a0001c0002t0004g0011 a0001c0002t0004g0012 a0001c0002t0004g0013 a0001c0002t0004g0014 a0001c0002t0004g0015 a0001c0002t0004g0016 a0001c0002t0020g0147 a0001c0003t0002g0138 a0001c0003t0002g0139 a0001c0003t0002g0140 a0001c0003t0002g0141 a0001c0003t0005g0142 a0001c0003t0005g0143 a0002c0004t0013g0004	25	174	0.1437	19	c.-49 others(28): Show c.-494_-493insCCGCCCCGCCGGCCCCGCC	SMURF2	ENSG00000108854.16	transcript	ENST00000262435.14	protein_coding		67		chr17	TogoVar
SMYD1_chr2_88062825_88118384	88065221	C C	CCCTCCCC others(12): Show CCCTCCCCTCCTCCCCCCCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp2 HG02015.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0189 a0001c0002t0001g0189	1	338	0.0030	19	c.-26 others(30): Show c.-2644_-2643insCCTCCCCTCCTCCCCCCCT	SMYD1	ENSG00000115593.15	transcript	ENST00000419482.7	protein_coding		2603		chr2	TogoVar
SMYD3_chr1_245744347_246512279	245833073	A A	AAAAAAAA others(12): Show AAAAAAAAAAAAAACACAAC	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0017 a0001c0001t0002g0017	1	150	0.0067	19	c.107 others(40): Show c.1076+25422_1076+25423insGTTGTGTTTTTTTTTTTTT	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	10/11			chr1	TogoVar
SNAI1_chr20_49977980_49993886	49991714	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19063.hp2 NA19063.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0010 a0001c0001t0004g0010	1	440	0.0023	19	c.36 others(30): Show c.3658_*3659insAAAAAAAAAAAAAAAAAAA	SNAI1	ENSG00000124216.4	transcript	ENST00000244050.3	protein_coding		2829		chr20	TogoVar
SNAI3_chr16_88672688_88691507	88689672	C C	CGAGGCAG others(12): Show CGAGGCAGACATCCCATGCG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18943.hp1 NA18967.hp2 NA18943.hp1 NA18967.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0015 a0001c0001t0001g0189 a0001c0001t0001g0015 a0001c0001t0001g0189	2	400	0.0050	19	c.-32 others(30): Show c.-3267_-3266insCGCATGGGATGTCTGCCTC	SNAI3	ENSG00000185669.6	transcript	ENST00000332281.6	protein_coding		3166		chr16	TogoVar
SNCAIP_chr5_122307237_122469219	122330117	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00408.hp1 HG00621.hp2 others(15): Show HG00140.hp2 HG00408.hp1 HG00621.hp2 HG01515.hp1 HG01943.hp1 HG02083.hp1 HG02132.hp2 HG02523.hp2 HG02602.hp2 HG02683.hp2 HG03239.hp1 HG03239.hp2 NA18946.hp2 NA18957.hp2 NA18969.hp1 NA18982.hp2 NA18983.hp2 NA19077.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0029 others(15): Show a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0029 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0039 a0001c0001t0001g0042 a0001c0001t0001g0049 a0001c0001t0001g0058 a0001c0001t0001g0060 a0001c0001t0001g0217 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0002g0041 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0057 a0001c0001t0002g0059	18	222	0.0811	19	c.-47 others(38): Show c.-47+17837_-47+17855dupTTTTTTTTTTTTTTTTTTT	SNCAIP	ENSG00000064692.20	transcript	ENST00000261368.13	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr5	TogoVar
SNCAIP_chr5_122307237_122469219	122351536	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18991.hp1 NA18991.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0115 a0001c0001t0001g0115	1	222	0.0045	19	c.-47 others(38): Show c.-47+39264_-47+39282dupAAAAAAAAAAAAAAAAAAA	SNCAIP	ENSG00000064692.20	transcript	ENST00000261368.13	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr5	TogoVar
SNCA_chr4_89719099_89842161	89842002	A A	AATTAACA others(12): Show AATTAACATTCACTATCTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0031 a0001c0001t0031	a0001c0001t0031g0149 a0001c0001t0031g0149	1	338	0.0030	19	c.-50 others(30): Show c.-5067_-5066insAAAGATAGTGAATGTTAAT	SNCA	ENSG00000145335.17	transcript	ENST00000394991.8	protein_coding		4842		chr4	TogoVar
SND1_chr7_127647194_128097593	127922199	T T	TTTTTTTT others(12): Show TTTTTTTTTGTTTTGTTTTG	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0143 a0001c0001t0001g0143	1	262	0.0038	19	c.152 others(38): Show c.1528-6985_1528-6984insTTTTGTTTTGTTTTGTTTT	SND1	ENSG00000197157.11	transcript	ENST00000354725.8	protein_coding	14/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
SND1_chr7_127647194_128097593	127922199	T T	TTTTTTTT others(12): Show TTTTTTTTTTTTTTGTTTTG	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0116 a0001c0001t0001g0116	1	262	0.0038	19	c.152 others(38): Show c.1528-6985_1528-6984insTTTTTTTTTGTTTTGTTTT	SND1	ENSG00000197157.11	transcript	ENST00000354725.8	protein_coding	14/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
SND1_chr7_127647194_128097593	127922199	T T	TTTTTTTT others(12): Show TTTTTTTTTTTTTTTTTTTG	intron_variant intron_variant	MODIFIER	NA19012.hp1 NA19012.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0080 a0001c0001t0001g0080	1	262	0.0038	19	c.152 others(38): Show c.1528-6985_1528-6984insTTTTTTTTTTTTTTGTTTT	SND1	ENSG00000197157.11	transcript	ENST00000354725.8	protein_coding	14/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
SNRNP70_chr19_49080451_49113604	49083789	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0230 a0001c0001t0001g0230	1	366	0.0027	19	c.-18 others(30): Show c.-1858_-1857insTTTTTTTTTTTTTTTTTTT	SNRNP70	ENSG00000104852.15	transcript	ENST00000598441.6	protein_coding		1661		chr19	TogoVar
SNRPA1_chr15_101276510_101300248	101289925	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00323.hp1 HG01069.hp1 others(21): Show HG00140.hp1 HG00323.hp1 HG01069.hp1 HG01099.hp2 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01258.hp1 HG01361.hp2 HG01981.hp1 HG02015.hp2 HG02300.hp2 HG02602.hp1 HG02922.hp2 HG02976.hp1 HG03579.hp1 HG03669.hp1 HG03927.hp2 HG04228.hp1 HG06807.hp1 NA18522.hp2 NA18974.hp1 NA19012.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0004 a0001c0001t0001g0022 a0001c0001t0001g0023 others(9): Show a0001c0001t0001g0004 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0059 a0001c0001t0001g0065 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0002t0001g0199	24	442	0.0543	19	c.309 others(36): Show c.309+2036_309+2037insTTTTTTTTTTTTTTTTTTT	SNRPA1	ENSG00000131876.18	transcript	ENST00000254193.11	protein_coding	3/8			chr15	TogoVar
SNRPD3_chr22_24550999_24579971	24561064	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03710.hp1 HG03710.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0245 a0001c0002t0002g0245	1	400	0.0025	19	c.126 others(36): Show c.126+3271_126+3289dupTTTTTTTTTTTTTTTTTTT	SNRPD3	ENSG00000100028.12	transcript	ENST00000215829.8	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr22	TogoVar
SNRPG_chr2_70276362_70298740	70283096	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0271 a0001c0001t0001g0271	1	424	0.0024	19	c.181 others(36): Show c.181-1431_181-1413dupTTTTTTTTTTTTTTTTTTT	SNRPG	ENSG00000143977.14	transcript	ENST00000272348.7	protein_coding	3/3			chr2	TogoVar
SNRPN_chr15_24949987_24983723	24969613	T T	TAGGAATT others(12): Show TAGGAATTTTTTAGCTTCTC	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0068 a0001c0001t0001g0068	1	346	0.0029	19	c.-14 others(38): Show c.-144+1534_-144+1552dupGAATTTTTTAGCTTCTCAG	SNRPN	ENSG00000128739.23	transcript	ENST00000390687.9	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SNTB1_chr8_120530756_120817046	120654039	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18995.hp2 NA18995.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0046 a0001c0001t0002g0046	1	254	0.0039	19	c.789 others(38): Show c.789-21407_789-21389dupTTTTTTTTTTTTTTTTTTT	SNTB1	ENSG00000172164.15	transcript	ENST00000517992.2	protein_coding	2/6			chr8	TogoVar
SNTB1_chr8_120530756_120817046	120757880	G G	GTGATGGC others(12): Show GTGATGGCCATGTTTTTCGC	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00639.hp2 HG00738.hp1 others(42): Show HG00099.hp1 HG00639.hp2 HG00738.hp1 HG00741.hp1 HG01074.hp2 HG01192.hp1 HG01952.hp1 HG02027.hp1 HG02055.hp1 HG02109.hp1 HG02258.hp1 HG02280.hp2 HG02486.hp2 HG02559.hp2 HG02602.hp2 HG02615.hp1 HG02630.hp1 HG02630.hp2 HG02683.hp1 HG02976.hp1 HG03041.hp1 HG03239.hp2 HG03486.hp1 HG03669.hp1 HG03834.hp2 HG03942.hp2 HG06807.hp1 NA18906.hp1 NA18944.hp1 NA18950.hp1 NA18951.hp1 NA18952.hp2 NA18959.hp1 NA18963.hp2 NA18967.hp1 NA18973.hp1 NA18982.hp1 NA18989.hp2 NA18992.hp1 NA18999.hp2 NA19000.hp2 NA19010.hp1 NA19043.hp1 NA19082.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(13): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012 a0001c0001t0015 a0001c0001t0019 a0001c0002t0013 a0001c0002t0016 a0002c0003t0001 a0002c0003t0002 a0002c0003t0005 a0002c0003t0021	a0001c0001t0001g0030 a0001c0001t0001g0035 a0001c0001t0001g0165 others(42): Show a0001c0001t0001g0030 a0001c0001t0001g0035 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0174 a0001c0001t0001g0179 a0001c0001t0001g0197 a0001c0001t0001g0203 a0001c0001t0001g0217 a0001c0001t0001g0223 a0001c0001t0001g0231 a0001c0001t0002g0022 a0001c0001t0002g0029 a0001c0001t0002g0033 a0001c0001t0002g0036 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0042 a0001c0001t0002g0055 a0001c0001t0002g0112 a0001c0001t0002g0169 a0001c0001t0002g0172 a0001c0001t0003g0037 a0001c0001t0004g0027 a0001c0001t0004g0028 a0001c0001t0004g0196 a0001c0001t0005g0221 a0001c0001t0008g0034 a0001c0001t0008g0167 a0001c0001t0008g0168 a0001c0001t0009g0032 a0001c0001t0009g0038 a0001c0001t0012g0164 a0001c0001t0015g0001 a0001c0001t0019g0216 a0001c0002t0013g0239 a0001c0002t0016g0238 a0002c0003t0001g0227 a0002c0003t0001g0230 a0002c0003t0001g0232 a0002c0003t0002g0229 a0002c0003t0005g0228 a0002c0003t0021g0254	45	254	0.1772	19	c.571 others(38): Show c.571+53374_571+53392dupGCGAAAAACATGGCCATCA	SNTB1	ENSG00000172164.15	transcript	ENST00000517992.2	protein_coding	1/6			chr8	TogoVar
SNTB2_chr16_69182164_69314052	69199595	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG03017.hp1 HG03491.hp2 others(1): Show HG02818.hp1 HG03017.hp1 HG03491.hp2 HG03492.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0002t0004 a0001c0002t0017 a0001c0001t0006 a0001c0002t0004 a0001c0002t0017	a0001c0001t0006g0061 a0001c0002t0004g0046 a0001c0002t0017g0043 others(1): Show a0001c0001t0006g0061 a0001c0002t0004g0046 a0001c0002t0017g0043 a0001c0002t0017g0044	4	218	0.0184	19	c.580 others(38): Show c.580+11865_580+11866insAAAAAAAAAAAAAAAAAAA	SNTB2	ENSG00000168807.17	transcript	ENST00000336278.9	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNTB2_chr16_69182164_69314052	69292407	T T	TATATAAT others(12): Show TATATAATATATATATATAA	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0038 a0001c0002t0038	a0001c0002t0038g0069 a0001c0002t0038g0069	1	218	0.0046	19	c.134 others(38): Show c.1346-7183_1346-7182insATATAATATATATATATAA	SNTB2	ENSG00000168807.17	transcript	ENST00000336278.9	protein_coding	5/6			chr16	TogoVar
SNTG1_chr8_49906407_50801692	49938603	T T	TTTCTTTC others(12): Show TTTCTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG04184.hp1 NA19240.hp2 HG04184.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0015 a0001c0001t0002 a0001c0001t0015	a0001c0001t0002g0010 a0001c0001t0015g0001 a0001c0001t0002g0010 a0001c0001t0015g0001	2	106	0.0189	19	c.-10 others(40): Show c.-103+26374_-103+26375insCTTTCTTTCTTTCTTTCTT	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50601152	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0010 a0001c0002t0010	a0001c0002t0010g0028 a0001c0002t0010g0028	1	106	0.0094	19	c.849 others(38): Show c.849+10249_849+10267dupAAAAAAAAAAAAAAAAAAA	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	13/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG2_chr2_945849_1372613	965330	A A	ATCCTCCT others(12): Show ATCCTCCTCCTGGTCCCCAG	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0041 a0001c0002t0001g0041	1	190	0.0053	19	c.72+ others(36): Show c.72+14281_72+14299dupGTCCTCCTCCTGGTCCCCA	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1031528	A A	ATATATAT others(12): Show ATATATATATATATATTTTT	intron_variant intron_variant	MODIFIER	NA18986.hp1 NA18986.hp1	a0008 a0008	a0008c0011 a0008c0011	a0008c0011t0001 a0008c0011t0001	a0008c0011t0001g0128 a0008c0011t0001g0128	1	190	0.0053	19	c.73- others(36): Show c.73-51989_73-51988insATATATATATATATTTTTT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNURF_chr15_24949987_24973821	24969613	T T	TAGGAATT others(12): Show TAGGAATTTTTTAGCTTCTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0071 a0001c0001t0001g0071	1	386	0.0026	19	c.15 others(30): Show c.1576_*1577insAGGAATTTTTTAGCTTCTC	SNURF	ENSG00000273173.6	transcript	ENST00000577949.6	protein_coding		793		chr15	TogoVar
SNX11_chr17_48102766_48128601	48105324	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01071.hp1 HG01071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0016 a0001c0001t0001g0016	1	416	0.0024	19	c.-25 others(30): Show c.-2528_-2527insTTTTTTTTTTTTTTTTTTT	SNX11	ENSG00000002919.15	transcript	ENST00000359238.7	protein_coding		2441		chr17	TogoVar
SNX15_chr11_65022439_65045572	65025779	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02647.hp2 NA19240.hp1 HG02647.hp2 NA19240.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0007 a0001c0001 a0006c0007	a0001c0001t0004 a0006c0007t0007 a0001c0001t0004 a0006c0007t0007	a0001c0001t0004g0028 a0006c0007t0007g0049 a0001c0001t0004g0028 a0006c0007t0007g0049	2	338	0.0059	19	c.-17 others(30): Show c.-1759_-1758insTTTTTTTTTTTTTTTTTTT	SNX15	ENSG00000110025.13	transcript	ENST00000377244.8	protein_coding		1659		chr11	TogoVar
SNX15_chr11_65022439_65045572	65039029	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02486.hp1 HG02896.hp2 others(3): Show HG01243.hp2 HG02486.hp1 HG02896.hp2 HG03098.hp1 HG03516.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0128 a0001c0001t0004g0135 a0001c0001t0004g0138 others(3): Show a0001c0001t0004g0128 a0001c0001t0004g0135 a0001c0001t0004g0138 a0001c0001t0004g0139 a0001c0001t0004g0140 a0001c0001t0004g0142	6	338	0.0178	19	c.922 others(34): Show c.922+201_922+219dupTTTTTTTTTTTTTTTTTTT	SNX15	ENSG00000110025.13	transcript	ENST00000377244.8	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr11	TogoVar
SNX18_chr5_54512759_54551586	54513901	A A	AATATATA others(12): Show AATATATAAATATATATGAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0005 a0001c0003t0005	a0001c0003t0005g0118 a0001c0003t0005g0118	1	390	0.0026	19	c.-40 others(30): Show c.-4052_-4051insATATATAAATATATATGAT	SNX18	ENSG00000178996.14	transcript	ENST00000381410.5	protein_coding		3857		chr5	TogoVar
SNX18_chr5_54512759_54551586	54513973	A A	AATATATA others(12): Show AATATATAAATATATATGAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02602.hp2 HG02683.hp2 HG03017.hp2 others(1): Show HG02602.hp2 HG02683.hp2 HG03017.hp2 HG03831.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0005 a0001c0003t0007 a0001c0003t0005 a0001c0003t0007	a0001c0003t0005g0005 a0001c0003t0005g0118 a0001c0003t0007g0005 a0001c0003t0005g0005 a0001c0003t0005g0118 a0001c0003t0007g0005	4	390	0.0103	19	c.-39 others(30): Show c.-3980_-3979insATATATAAATATATATGAT	SNX18	ENSG00000178996.14	transcript	ENST00000381410.5	protein_coding		3785		chr5	TogoVar
SNX18_chr5_54512759_54551586	54514045	A A	AATATATA others(12): Show AATATATAAATATATATGAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00323.hp1 HG00438.hp1 others(30): Show HG00280.hp1 HG00323.hp1 HG00438.hp1 HG00544.hp1 HG00639.hp2 HG00642.hp1 HG01074.hp2 HG01081.hp2 HG01169.hp1 HG01257.hp1 HG02027.hp1 HG02132.hp2 HG02155.hp1 HG02258.hp1 HG02683.hp2 HG02717.hp1 HG02886.hp2 HG02965.hp1 HG03017.hp2 HG03209.hp1 HG03453.hp1 HG03486.hp2 HG03831.hp2 HG04115.hp1 NA18747.hp2 NA18947.hp1 NA18955.hp1 NA18962.hp2 NA18964.hp1 NA18982.hp1 NA18995.hp2 NA18999.hp1 NA20905.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0004 a0001c0003t0005 others(5): Show a0001c0003t0002 a0001c0003t0004 a0001c0003t0005 a0001c0003t0006 a0001c0003t0007 a0001c0003t0014 a0001c0003t0033 a0001c0003t0047	a0001c0003t0002g0111 a0001c0003t0004g0114 a0001c0003t0005g0005 others(17): Show a0001c0003t0002g0111 a0001c0003t0004g0114 a0001c0003t0005g0005 a0001c0003t0005g0010 a0001c0003t0005g0041 a0001c0003t0005g0106 a0001c0003t0005g0107 a0001c0003t0005g0112 a0001c0003t0005g0115 a0001c0003t0005g0117 a0001c0003t0006g0020 a0001c0003t0006g0110 a0001c0003t0007g0005 a0001c0003t0007g0042 a0001c0003t0007g0109 a0001c0003t0007g0113 a0001c0003t0007g0119 a0001c0003t0014g0020 a0001c0003t0033g0116 a0001c0003t0047g0005	33	390	0.0846	19	c.-39 others(30): Show c.-3908_-3907insATATATAAATATATATGAT	SNX18	ENSG00000178996.14	transcript	ENST00000381410.5	protein_coding		3713		chr5	TogoVar
SNX25_chr4_185204598_185368966	185212491	G G	GTGTGTGT others(12): Show GTGTGTGTGTGTTTTTGTTT	intron_variant intron_variant	MODIFIER	NA18942.hp2 NA18994.hp1 NA19070.hp2 others(1): Show NA18942.hp2 NA18994.hp1 NA19070.hp2 NA19080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 others(1): Show a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008	4	276	0.0145	19	c.429 others(36): Show c.429+2237_429+2238insGTGTGTGTGTTTTTGTTTT	SNX25	ENSG00000109762.17	transcript	ENST00000652585.2	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr4	TogoVar
SNX27_chr1_151607050_151704080	151681235	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01099.hp1 NA18947.hp2 NA18991.hp2 others(3): Show HG01099.hp1 NA18947.hp2 NA18991.hp2 NA19003.hp2 NA19004.hp2 NA19091.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0010 a0001c0001t0011 a0001c0001t0179 others(1): Show a0001c0001t0010 a0001c0001t0011 a0001c0001t0179 a0002c0002t0006	a0001c0001t0010g0358 a0001c0001t0011g0266 a0001c0001t0179g0257 others(2): Show a0001c0001t0010g0358 a0001c0001t0011g0266 a0001c0001t0179g0257 a0002c0002t0006g0002 a0002c0002t0006g0250	6	366	0.0164	19	c.115 others(38): Show c.1150-2115_1150-2097dupTTTTTTTTTTTTTTTTTTT	SNX27	ENSG00000143376.14	transcript	ENST00000458013.7	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
SNX29_chr16_11971734_12579287	12013500	A A	AAATATAT others(12): Show AAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG06807.hp2 HG02486.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0018 a0001c0001 a0001c0018	a0001c0001t0028 a0001c0018t0007 a0001c0001t0028 a0001c0018t0007	a0001c0001t0028g0122 a0001c0018t0007g0057 a0001c0001t0028g0122 a0001c0018t0007g0057	2	176	0.0114	19	c.122 others(38): Show c.122+10458_122+10459insATATATATATATATATATA	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	3/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12013500	A A	ATATATAT others(12): Show ATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02451.hp1 NA19043.hp2 HG02451.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0034 a0001c0001t0002 a0001c0001t0034	a0001c0001t0002g0081 a0001c0001t0034g0063 a0001c0001t0002g0081 a0001c0001t0034g0063	2	176	0.0114	19	c.122 others(38): Show c.122+10457_122+10458insTATATATATATATATATAT	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	3/20			chr16	TogoVar
SNX29_chr16_11971734_12579287	12380459	T T	TCCACCCA others(12): Show TCCACCCACCATCCACCCAC	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp1 HG00323.hp1 others(52): Show HG00140.hp2 HG00280.hp1 HG00323.hp1 HG00438.hp1 HG00438.hp2 HG00639.hp1 HG00738.hp2 HG01081.hp1 HG01081.hp2 HG01109.hp1 HG01109.hp2 HG01175.hp1 HG01257.hp1 HG01261.hp1 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01981.hp1 HG01993.hp2 HG02015.hp1 HG02040.hp2 HG02451.hp2 HG02559.hp1 HG02886.hp2 HG02895.hp2 HG03471.hp2 HG03490.hp2 HG03579.hp1 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 NA18522.hp1 NA18969.hp1 NA18969.hp2 NA18979.hp2 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA19009.hp2 NA19043.hp1 NA19043.hp2 NA19060.hp1 NA19060.hp2 NA19065.hp1 NA19070.hp2 NA19085.hp1 NA19090.hp1 NA19090.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20805.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0002 a0001c0003 others(9): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0012 a0001c0014 a0001c0015 a0001c0022 a0001c0023 a0001c0025 a0002c0005 a0005c0011	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(43): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0001t0031 a0001c0001t0032 a0001c0001t0034 a0001c0001t0041 a0001c0001t0046 a0001c0001t0047 a0001c0001t0052 a0001c0001t0059 a0001c0001t0102 a0001c0001t0110 a0001c0002t0003 a0001c0002t0005 a0001c0002t0065 a0001c0002t0069 a0001c0002t0073 a0001c0002t0075 a0001c0002t0076 a0001c0002t0077 a0001c0002t0090 a0001c0002t0109 a0001c0003t0001 a0001c0003t0004 a0001c0003t0006 a0001c0003t0057 a0001c0003t0060 a0001c0003t0103 a0001c0004t0003 a0001c0004t0021 a0001c0004t0071 a0001c0004t0080 a0001c0004t0084 a0001c0004t0105 a0001c0012t0002 a0001c0014t0015 a0001c0015t0003 a0001c0022t0049 a0001c0023t0008 a0001c0025t0096 a0002c0005t0039 a0005c0011t0009	a0001c0001t0001g0112 a0001c0001t0001g0163 a0001c0001t0002g0020 others(52): Show a0001c0001t0001g0112 a0001c0001t0001g0163 a0001c0001t0002g0020 a0001c0001t0004g0078 a0001c0001t0014g0099 a0001c0001t0015g0085 a0001c0001t0017g0025 a0001c0001t0031g0143 a0001c0001t0032g0130 a0001c0001t0034g0063 a0001c0001t0041g0046 a0001c0001t0046g0047 a0001c0001t0047g0155 a0001c0001t0052g0026 a0001c0001t0059g0040 a0001c0001t0102g0001 a0001c0001t0110g0162 a0001c0002t0003g0051 a0001c0002t0003g0134 a0001c0002t0003g0152 a0001c0002t0003g0160 a0001c0002t0005g0002 a0001c0002t0005g0032 a0001c0002t0005g0084 a0001c0002t0005g0168 a0001c0002t0065g0136 a0001c0002t0069g0017 a0001c0002t0073g0096 a0001c0002t0075g0129 a0001c0002t0076g0100 a0001c0002t0077g0120 a0001c0002t0090g0170 a0001c0002t0109g0036 a0001c0003t0001g0103 a0001c0003t0001g0154 a0001c0003t0004g0176 a0001c0003t0006g0144 a0001c0003t0057g0105 a0001c0003t0060g0093 a0001c0003t0103g0079 a0001c0004t0003g0138 a0001c0004t0003g0161 a0001c0004t0021g0080 a0001c0004t0071g0109 a0001c0004t0080g0054 a0001c0004t0084g0135 a0001c0004t0105g0042 a0001c0012t0002g0028 a0001c0014t0015g0165 a0001c0015t0003g0166 a0001c0022t0049g0061 a0001c0023t0008g0110 a0001c0025t0096g0076 a0002c0005t0039g0013 a0005c0011t0009g0116	55	176	0.3125	19	c.190 others(40): Show c.1900-17973_1900-17972insCCCACCCACCCACCATCCA	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	16/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12381195	C C	CCACCCAC others(12): Show CCACCCACCATCCACCTACA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp1 HG00323.hp1 others(45): Show HG00140.hp2 HG00280.hp1 HG00323.hp1 HG00438.hp1 HG00438.hp2 HG00639.hp1 HG00738.hp2 HG01081.hp1 HG01081.hp2 HG01109.hp2 HG01257.hp1 HG01261.hp1 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01981.hp1 HG01993.hp2 HG02015.hp1 HG02040.hp2 HG02523.hp1 HG02559.hp1 HG03471.hp2 HG03490.hp2 HG03579.hp1 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 NA18969.hp1 NA18969.hp2 NA18979.hp2 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA19009.hp2 NA19043.hp2 NA19060.hp1 NA19060.hp2 NA19065.hp1 NA19070.hp2 NA19085.hp1 NA19090.hp1 NA19090.hp2 NA20129.hp2 NA20300.hp2 NA20805.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0003 others(7): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0012 a0001c0014 a0001c0015 a0001c0023 a0001c0025 a0005c0011	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(36): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0014 a0001c0001t0015 a0001c0001t0031 a0001c0001t0032 a0001c0001t0034 a0001c0001t0041 a0001c0001t0046 a0001c0001t0047 a0001c0001t0059 a0001c0001t0102 a0001c0001t0110 a0001c0002t0003 a0001c0002t0005 a0001c0002t0065 a0001c0002t0073 a0001c0002t0075 a0001c0002t0076 a0001c0002t0090 a0001c0002t0109 a0001c0003t0001 a0001c0003t0004 a0001c0003t0006 a0001c0003t0057 a0001c0003t0060 a0001c0003t0103 a0001c0003t0104 a0001c0004t0003 a0001c0004t0071 a0001c0004t0084 a0001c0004t0105 a0001c0012t0002 a0001c0014t0015 a0001c0015t0003 a0001c0023t0008 a0001c0025t0096 a0005c0011t0009	a0001c0001t0001g0112 a0001c0001t0001g0163 a0001c0001t0002g0020 others(45): Show a0001c0001t0001g0112 a0001c0001t0001g0163 a0001c0001t0002g0020 a0001c0001t0004g0078 a0001c0001t0014g0099 a0001c0001t0015g0085 a0001c0001t0031g0143 a0001c0001t0032g0130 a0001c0001t0034g0063 a0001c0001t0041g0046 a0001c0001t0046g0047 a0001c0001t0047g0155 a0001c0001t0059g0040 a0001c0001t0102g0001 a0001c0001t0110g0162 a0001c0002t0003g0051 a0001c0002t0003g0134 a0001c0002t0003g0152 a0001c0002t0003g0160 a0001c0002t0005g0002 a0001c0002t0005g0032 a0001c0002t0005g0084 a0001c0002t0005g0168 a0001c0002t0065g0136 a0001c0002t0073g0096 a0001c0002t0075g0129 a0001c0002t0076g0100 a0001c0002t0090g0170 a0001c0002t0109g0036 a0001c0003t0001g0103 a0001c0003t0001g0154 a0001c0003t0004g0176 a0001c0003t0006g0144 a0001c0003t0057g0105 a0001c0003t0060g0093 a0001c0003t0103g0079 a0001c0003t0104g0156 a0001c0004t0003g0138 a0001c0004t0003g0161 a0001c0004t0071g0109 a0001c0004t0084g0135 a0001c0004t0105g0042 a0001c0012t0002g0028 a0001c0014t0015g0165 a0001c0015t0003g0166 a0001c0023t0008g0110 a0001c0025t0096g0076 a0005c0011t0009g0116	48	176	0.2727	19	c.190 others(40): Show c.1900-17251_1900-17250insCACCCACCATCCACCTACA	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	16/20			chr16	TogoVar
SNX29_chr16_11971734_12579287	12483114	G G	GTTTTTTT others(12): Show GTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA20805.hp2 NA20805.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0071 a0001c0004t0071	a0001c0004t0071g0109 a0001c0004t0071g0109	1	176	0.0057	19	c.217 others(38): Show c.2178+5266_2178+5284dupTTTTTTTTTTTTTTTTTTT	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	19/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12512418	A A	ATATATAT others(12): Show ATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01167.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0040 a0001c0001t0040	a0001c0001t0040g0124 a0001c0001t0040g0124	1	176	0.0057	19	c.217 others(40): Show c.2179-12284_2179-12283insTATATATATATATATATAT	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	19/20			chr16	TogoVar
SNX29_chr16_11971734_12579287	12557015	A A	ACACCCCC others(12): Show ACACCCCCCCCCCCCCCCCC	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG01981.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0025 a0001c0003t0025	a0001c0003t0025g0083 a0001c0003t0025g0083	1	176	0.0057	19	c.231 others(40): Show c.2319-11490_2319-11489insACCCCCCCCCCCCCCCCCC	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX2_chr5_122770080_122839543	122814752	T T	TTTTTTTT others(12): Show TTTTTTTTGGTTTTTTTTTG	intron_variant intron_variant	MODIFIER	NA18967.hp2 NA18967.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0204 a0001c0001t0004g0204	1	372	0.0027	19	c.723 others(36): Show c.723-1137_723-1136insGGTTTTTTTTTGTTTTTTT	SNX2	ENSG00000205302.7	transcript	ENST00000379516.7	protein_coding	7/14		INFO_REALIGN_3_PRIME	chr5	TogoVar
SNX30_chr9_112745760_112879987	112817401	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01074.hp1 HG02630.hp1 others(4): Show HG00738.hp1 HG01074.hp1 HG02630.hp1 HG02647.hp1 NA18951.hp2 NA19067.hp1 NA19078.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0002t0026	a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0179 others(4): Show a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0179 a0001c0001t0003g0299 a0001c0001t0003g0300 a0001c0002t0001g0026 a0001c0002t0026g0198	7	338	0.0207	19	c.349 others(34): Show c.349-292_349-274dupTTTTTTTTTTTTTTTTTTT	SNX30	ENSG00000148158.17	transcript	ENST00000374232.8	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
SNX31_chr8_100567889_100654665	100641565	A A	AAAAAAAA others(12): Show AAAAAAAAATATATATATAT	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0196 a0003c0003t0001g0196	1	304	0.0033	19	c.142 others(36): Show c.142-5555_142-5554insATATATATATATTTTTTTT	SNX31	ENSG00000174226.9	transcript	ENST00000311812.7	protein_coding	2/13			chr8	TogoVar
SNX32_chr11_65828963_65858701	65839215	A A	ATTTTTTT others(12): Show ATTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0141 a0001c0001t0001g0141	1	390	0.0026	19	c.36+ others(34): Show c.36+5121_36+5122insTTTTTTTTTTTTTTTTTTT	SNX32	ENSG00000172803.18	transcript	ENST00000308342.7	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr11	TogoVar
SNX32_chr11_65828963_65858701	65839223	G G	GTTTTTTT others(12): Show GTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00597.hp1 HG01071.hp1 others(15): Show HG00558.hp1 HG00597.hp1 HG01071.hp1 HG01175.hp1 HG01516.hp1 HG01516.hp2 HG02129.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp2 NA18943.hp2 NA18944.hp2 NA18952.hp1 NA18971.hp2 NA18989.hp1 NA18990.hp2 NA19004.hp1 NA19079.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0006t0001 a0001c0001t0001 a0001c0006t0001	a0001c0001t0001g0013 a0001c0001t0001g0027 a0001c0001t0001g0028 others(12): Show a0001c0001t0001g0013 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0050 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0098 a0001c0001t0001g0101 a0001c0001t0001g0104 a0001c0001t0001g0108 a0001c0006t0001g0027	18	390	0.0462	19	c.36+ others(34): Show c.36+5123_36+5124insTTTTTTTTTTTTTTTTTTT	SNX32	ENSG00000172803.18	transcript	ENST00000308342.7	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr11	TogoVar
SNX32_chr11_65828963_65858701	65839225	A A	ATTTTTTT others(12): Show ATTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18954.hp2 NA18954.hp2	a0003 a0003	a0003c0010 a0003c0010	a0003c0010t0003 a0003c0010t0003	a0003c0010t0003g0231 a0003c0010t0003g0231	1	390	0.0026	19	c.36+ others(34): Show c.36+5128_36+5146dupTTTTTTTTTTTTTTTTTTT	SNX32	ENSG00000172803.18	transcript	ENST00000308342.7	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr11	TogoVar
SNX4_chr3_125441650_125525202	125471344	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0195 a0001c0001t0001g0195	1	360	0.0028	19	c.789 others(36): Show c.789-1844_789-1826dupTTTTTTTTTTTTTTTTTTT	SNX4	ENSG00000114520.11	transcript	ENST00000251775.9	protein_coding	8/13			chr3	TogoVar
SNX4_chr3_125441650_125525202	125495250	T T	TATATATA others(12): Show TATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0186 a0001c0001t0001g0186	1	360	0.0028	19	c.597 others(36): Show c.597+2090_597+2091insTATATATATATATATATAT	SNX4	ENSG00000114520.11	transcript	ENST00000251775.9	protein_coding	5/13			chr3	TogoVar
SNX7_chr1_98656721_98765500	98763437	A A	ATATATAT others(12): Show ATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0062 a0001c0001t0001g0062	1	378	0.0027	19	c.33 others(30): Show c.3306_*3307insTATATATATATATATATAT	SNX7	ENSG00000162627.17	transcript	ENST00000306121.8	protein_coding		2938		chr1	TogoVar

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