Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SUSD1_chr9_112035783_112180297	112165922	A A	AAAAGAAA others(12): Show AAAAGAAAGAAAGAAAGAAG	intron_variant intron_variant	MODIFIER	HG02280.hp1 NA18954.hp1 HG02280.hp1 NA18954.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0071 a0001c0001t0002g0017 a0001c0001t0001g0071 a0001c0001t0002g0017	2	234	0.0085	19	c.104 others(36): Show c.104-8310_104-8309insCTTCTTTCTTTCTTTCTTT	SUSD1	ENSG00000106868.17	transcript	ENST00000374270.8	protein_coding	1/16			chr9	TogoVar
SUSD1_chr9_112035783_112180297	112165990	A A	AAAGAAAG others(12): Show AAAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	NA19055.hp1 NA19055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0333 a0001c0001t0002g0333	1	335	0.0030	19	c.104 others(36): Show c.104-8378_104-8377insCTTTCTTTCTTTCTTTCTT	SUSD1	ENSG00000106868.17	transcript	ENST00000374270.8	protein_coding	1/16			chr9	TogoVar
SUSD4_chr1_223215831_223369176	223268011	T T	TATATATA others(12): Show TATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01952.hp2 HG01952.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0258 a0001c0001t0001g0258	1	99	0.0101	19	c.535 others(34): Show c.535+490_535+491insTATATATATATATATATAT	SUSD4	ENSG00000143502.16	transcript	ENST00000366878.9	protein_coding	4/8			chr1	TogoVar
SV2A_chr1_149898318_149922844	149907310	T T	TGCATATA others(12): Show TGCATATATTTTAATAGTGA	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00544.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0070 a0001c0001t0002g0070	1	362	0.0028	19	c.167 others(36): Show c.1678+389_1678+390insTCACTATTAAAATATATGC	SV2A	ENSG00000159164.10	transcript	ENST00000369146.8	protein_coding	10/12			chr1	TogoVar
SV2B_chr15_91095257_91307565	91125781	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00140.hp2	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0005 a0001c0012t0005	a0001c0012t0005g0150 a0001c0012t0005g0150	1	133	0.0075	19	c.-39 others(40): Show c.-392+25419_-392+25437dupAAAAAAAAAAAAAAAAAAA	SV2B	ENSG00000185518.12	transcript	ENST00000394232.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr15	TogoVar
SV2B_chr15_91095257_91307565	91137609	T T	TATATATA others(12): Show TATATATATTTCATATATAC	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00544.hp1 HG00544.hp2 others(111): Show HG00140.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00609.hp1 HG00609.hp2 HG00735.hp1 HG00741.hp2 HG01071.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01123.hp1 HG01167.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01496.hp1 HG01515.hp2 HG01516.hp1 HG01891.hp1 HG01891.hp2 HG02040.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02486.hp1 HG02486.hp2 HG02572.hp1 HG02602.hp2 HG02615.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp2 HG03139.hp1 HG03139.hp2 HG03239.hp2 HG03453.hp2 HG03486.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03579.hp2 HG03654.hp1 HG03710.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18944.hp2 NA18954.hp1 NA18954.hp2 NA18969.hp1 NA18983.hp1 NA18983.hp2 NA19043.hp1 NA19043.hp2 NA19056.hp1 NA19056.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20905.hp1	a0001 a0004 a0005 a0001 a0004 a0005	a0001c0001 a0001c0002 a0001c0003 others(11): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0008 a0001c0010 a0001c0017 a0001c0018 a0004c0014 a0004c0015 a0005c0027	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(53): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0010 a0001c0001t0012 a0001c0001t0015 a0001c0001t0017 a0001c0001t0018 a0001c0001t0046 a0001c0001t0050 a0001c0001t0054 a0001c0001t0055 a0001c0001t0056 a0001c0001t0060 a0001c0001t0061 a0001c0001t0062 a0001c0001t0063 a0001c0001t0064 a0001c0001t0065 a0001c0001t0066 a0001c0001t0075 a0001c0001t0076 a0001c0002t0001 a0001c0002t0009 a0001c0002t0011 a0001c0002t0014 a0001c0002t0017 a0001c0002t0020 a0001c0002t0072 a0001c0003t0004 a0001c0003t0022 a0001c0003t0040 a0001c0004t0003 a0001c0004t0009 a0001c0004t0023 a0001c0004t0024 a0001c0004t0026 a0001c0004t0027 a0001c0004t0037 a0001c0004t0053 a0001c0004t0071 a0001c0005t0002 a0001c0005t0007 a0001c0005t0015 a0001c0006t0004 a0001c0006t0029 a0001c0007t0002 a0001c0008t0001 a0001c0010t0005 a0001c0010t0015 a0001c0017t0001 a0001c0018t0028 a0004c0014t0047 a0004c0015t0020 a0005c0027t0007	a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0042 others(111): Show a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0042 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0064 a0001c0001t0001g0084 a0001c0001t0001g0087 a0001c0001t0001g0096 a0001c0001t0001g0105 a0001c0001t0001g0108 a0001c0001t0001g0114 a0001c0001t0001g0121 a0001c0001t0001g0130 a0001c0001t0001g0143 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0181 a0001c0001t0002g0015 a0001c0001t0002g0058 a0001c0001t0002g0099 a0001c0001t0002g0170 a0001c0001t0003g0043 a0001c0001t0003g0054 a0001c0001t0003g0068 a0001c0001t0003g0088 a0001c0001t0003g0089 a0001c0001t0003g0118 a0001c0001t0003g0120 a0001c0001t0003g0123 a0001c0001t0003g0124 a0001c0001t0003g0163 a0001c0001t0005g0034 a0001c0001t0005g0062 a0001c0001t0010g0049 a0001c0001t0010g0106 a0001c0001t0010g0109 a0001c0001t0010g0112 a0001c0001t0010g0129 a0001c0001t0012g0003 a0001c0001t0012g0018 a0001c0001t0012g0208 a0001c0001t0015g0024 a0001c0001t0017g0138 a0001c0001t0017g0214 a0001c0001t0018g0055 a0001c0001t0018g0111 a0001c0001t0018g0131 a0001c0001t0046g0128 a0001c0001t0050g0132 a0001c0001t0054g0035 a0001c0001t0055g0137 a0001c0001t0056g0107 a0001c0001t0060g0037 a0001c0001t0061g0031 a0001c0001t0062g0176 a0001c0001t0063g0026 a0001c0001t0064g0119 a0001c0001t0065g0110 a0001c0001t0066g0052 a0001c0001t0075g0203 a0001c0001t0076g0207 a0001c0002t0001g0095 a0001c0002t0001g0101 a0001c0002t0009g0085 a0001c0002t0011g0059 a0001c0002t0011g0061 a0001c0002t0014g0025 a0001c0002t0014g0038 a0001c0002t0017g0083 a0001c0002t0020g0044 a0001c0002t0072g0063 a0001c0003t0004g0023 a0001c0003t0004g0057 a0001c0003t0004g0197 a0001c0003t0004g0202 a0001c0003t0022g0196 a0001c0003t0040g0212 a0001c0004t0003g0136 a0001c0004t0009g0098 a0001c0004t0023g0094 a0001c0004t0024g0020 a0001c0004t0026g0011 a0001c0004t0026g0075 a0001c0004t0027g0148 a0001c0004t0037g0194 a0001c0004t0053g0086 a0001c0004t0071g0188 a0001c0005t0002g0104 a0001c0005t0007g0027 a0001c0005t0007g0082 a0001c0005t0007g0113 a0001c0005t0007g0157 a0001c0005t0015g0097 a0001c0006t0004g0019 a0001c0006t0029g0191 a0001c0007t0002g0016 a0001c0007t0002g0060 a0001c0007t0002g0080 a0001c0008t0001g0028 a0001c0008t0001g0036 a0001c0008t0001g0081 a0001c0008t0001g0156 a0001c0010t0005g0100 a0001c0010t0015g0067 a0001c0017t0001g0160 a0001c0018t0028g0093 a0004c0014t0047g0213 a0004c0015t0020g0090 a0005c0027t0007g0125	114	194	0.5876	19	c.-39 others(40): Show c.-392+37253_-392+37271dupATTTCATATATACATATAT	SV2B	ENSG00000185518.12	transcript	ENST00000394232.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr15	TogoVar
SV2B_chr15_91095257_91307565	91191063	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03834.hp2 HG03834.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0120 a0001c0001t0003g0120	1	127	0.0079	19	c.-39 others(40): Show c.-391-34807_-391-34789dupTTTTTTTTTTTTTTTTTTT	SV2B	ENSG00000185518.12	transcript	ENST00000394232.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr15	TogoVar
SVBP_chr1_42802052_42822397	42817060	G G	GCCCGGCC others(12): Show GCCCGGCCCCCCGACCCCGC	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02809.hp2 HG02976.hp2 others(2): Show HG02559.hp1 HG02809.hp2 HG02976.hp2 HG03195.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0022 a0001c0001t0007g0142 a0001c0001t0007g0022 a0001c0001t0007g0142	5	392	0.0128	19	c.-37 others(34): Show c.-37+111_-37+129dupGCGGGGTCGGGGGGCCGGG	SVBP	ENSG00000177868.12	transcript	ENST00000372521.9	protein_coding	1/2			chr1	TogoVar
SVEP1_chr9_110360248_110584741	110403296	G G	GTTTTTTT others(12): Show GTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18961.hp2 NA18967.hp2 NA18995.hp1 others(2): Show NA18961.hp2 NA18967.hp2 NA18995.hp1 NA19000.hp2 NA19083.hp1	a0002 a0005 a0105 a0002 a0005 a0105	a0002c0001 a0005c0006 a0005c0007 others(1): Show a0002c0001 a0005c0006 a0005c0007 a0105c0091	a0002c0001t0002 a0005c0006t0002 a0005c0007t0002 others(1): Show a0002c0001t0002 a0005c0006t0002 a0005c0007t0002 a0105c0091t0001	a0002c0001t0002g0330 a0005c0006t0002g0227 a0005c0006t0002g0295 others(2): Show a0002c0001t0002g0330 a0005c0006t0002g0227 a0005c0006t0002g0295 a0005c0007t0002g0334 a0105c0091t0001g0159	5	63	0.0794	19	c.966 others(38): Show c.9666+1012_9666+1030dupAAAAAAAAAAAAAAAAAAA	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	39/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110428429	C C	CACACACA others(12): Show CACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG01168.hp1	a0024 a0024	a0024c0020 a0024c0020	a0024c0020t0001 a0024c0020t0001	a0024c0020t0001g0056 a0024c0020t0001g0056	1	188	0.0053	19	c.580 others(36): Show c.5808-672_5808-671insTGTGTGTGTGTGTGTGTGT	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	35/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110434666	T T	TAAAAAAA others(12): Show TAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01978.hp1 HG02717.hp2 others(2): Show HG01074.hp2 HG01978.hp1 HG02717.hp2 HG02723.hp1 HG03209.hp2	a0022 a0050 a0053 others(1): Show a0022 a0050 a0053 a0072	a0022c0048 a0050c0054 a0053c0115 others(1): Show a0022c0048 a0050c0054 a0053c0115 a0072c0138	a0022c0048t0003 a0050c0054t0001 a0050c0054t0004 others(2): Show a0022c0048t0003 a0050c0054t0001 a0050c0054t0004 a0053c0115t0009 a0072c0138t0003	a0022c0048t0003g0349 a0050c0054t0001g0096 a0050c0054t0004g0097 others(2): Show a0022c0048t0003g0349 a0050c0054t0001g0096 a0050c0054t0004g0097 a0053c0115t0009g0069 a0072c0138t0003g0065	5	40	0.1250	19	c.488 others(36): Show c.4889-179_4889-161dupTTTTTTTTTTTTTTTTTTT	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	29/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110466760	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00558.hp2 HG01168.hp2 others(25): Show HG00438.hp2 HG00558.hp2 HG01168.hp2 HG02015.hp1 HG02027.hp1 HG02071.hp2 HG02132.hp1 HG02258.hp1 HG02273.hp1 HG02615.hp2 HG03195.hp2 HG03225.hp2 HG03486.hp1 HG03491.hp1 HG03710.hp2 NA18945.hp2 NA18953.hp2 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18968.hp2 NA18969.hp1 NA18975.hp2 NA18995.hp2 NA19064.hp1 NA19074.hp1 NA19077.hp2 NA19090.hp1	a0002 a0003 a0006 others(13): Show a0002 a0003 a0006 a0009 a0011 a0017 a0019 a0030 a0038 a0044 a0051 a0074 a0082 a0094 a0096 a0104	a0002c0001 a0003c0004 a0003c0032 others(16): Show a0002c0001 a0003c0004 a0003c0032 a0003c0062 a0003c0126 a0006c0003 a0009c0010 a0011c0009 a0017c0016 a0019c0015 a0030c0034 a0038c0023 a0044c0052 a0051c0152 a0074c0127 a0082c0103 a0094c0139 a0096c0084 a0104c0117	a0002c0001t0002 a0003c0004t0001 a0003c0032t0001 others(17): Show a0002c0001t0002 a0003c0004t0001 a0003c0032t0001 a0003c0062t0006 a0003c0126t0001 a0006c0003t0001 a0006c0003t0002 a0009c0010t0001 a0011c0009t0001 a0017c0016t0001 a0019c0015t0003 a0030c0034t0005 a0038c0023t0001 a0044c0052t0002 a0051c0152t0001 a0074c0127t0001 a0082c0103t0005 a0094c0139t0001 a0096c0084t0005 a0104c0117t0002	a0002c0001t0002g0332 a0003c0004t0001g0030 a0003c0004t0001g0034 others(25): Show a0002c0001t0002g0332 a0003c0004t0001g0030 a0003c0004t0001g0034 a0003c0004t0001g0272 a0003c0004t0001g0338 a0003c0032t0001g0215 a0003c0032t0001g0238 a0003c0062t0006g0011 a0003c0126t0001g0234 a0006c0003t0001g0111 a0006c0003t0001g0318 a0006c0003t0002g0150 a0009c0010t0001g0270 a0011c0009t0001g0216 a0011c0009t0001g0220 a0011c0009t0001g0328 a0017c0016t0001g0222 a0017c0016t0001g0351 a0019c0015t0003g0181 a0030c0034t0005g0083 a0038c0023t0001g0189 a0044c0052t0002g0247 a0051c0152t0001g0357 a0074c0127t0001g0235 a0082c0103t0005g0077 a0094c0139t0001g0103 a0096c0084t0005g0076 a0104c0117t0002g0278	28	56	0.5000	19	c.316 others(36): Show c.3161-735_3161-734insTTTTTTTTTTTTTTTTTTT	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	17/47			chr9	TogoVar
SVIL_chr10_29452338_29639971	29509330	G G	GAGAGAGA others(12): Show GAGAGAGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00558.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0113 a0001c0002t0001g0113	1	73	0.0137	19	c.351 others(38): Show c.3516+3404_3516+3405insTCTCTCTCTCTCTCTCTCT	SVIL	ENSG00000197321.16	transcript	ENST00000355867.9	protein_coding	17/37			chr10	TogoVar
SVOPL_chr7_138589285_138706362	138642831	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG00621.hp2 HG02027.hp1 others(12): Show HG00544.hp1 HG00621.hp2 HG02027.hp1 HG02155.hp2 HG02897.hp1 HG03239.hp2 HG04204.hp2 NA18953.hp2 NA18959.hp2 NA18960.hp1 NA18967.hp1 NA18982.hp2 NA19003.hp1 NA19083.hp1 NA19090.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0008 a0003c0007 a0003c0009 others(4): Show a0001c0008 a0003c0007 a0003c0009 a0003c0011 a0003c0028 a0004c0012 a0004c0013	a0001c0008t0002 a0003c0007t0001 a0003c0007t0002 others(7): Show a0001c0008t0002 a0003c0007t0001 a0003c0007t0002 a0003c0007t0004 a0003c0009t0002 a0003c0011t0005 a0003c0028t0002 a0004c0012t0001 a0004c0013t0001 a0004c0013t0012	a0001c0008t0002g0186 a0003c0007t0001g0071 a0003c0007t0001g0275 others(12): Show a0001c0008t0002g0186 a0003c0007t0001g0071 a0003c0007t0001g0275 a0003c0007t0002g0076 a0003c0007t0002g0177 a0003c0007t0002g0230 a0003c0007t0002g0236 a0003c0007t0004g0297 a0003c0009t0002g0015 a0003c0009t0002g0313 a0003c0011t0005g0285 a0003c0028t0002g0057 a0004c0012t0001g0279 a0004c0013t0001g0070 a0004c0013t0012g0360	15	317	0.0473	19	c.789 others(36): Show c.789+1867_789+1885dupTTTTTTTTTTTTTTTTTTT	SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	9/15			chr7	TogoVar
SWAP70_chr11_9659077_9757993	9671740	A A	ATATAAAT others(12): Show ATATAAATATAAAATATATT	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp2 NA20300.hp1 HG02896.hp2 HG02897.hp2 NA20300.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0013 a0001c0003t0013	a0001c0003t0013g0002 a0001c0003t0013g0003 a0001c0003t0013g0004 a0001c0003t0013g0002 a0001c0003t0013g0003 a0001c0003t0013g0004	3	291	0.0103	19	c.99+ others(34): Show c.99+7464_99+7465insTAAATATAAAATATATTTA	SWAP70	ENSG00000133789.15	transcript	ENST00000318950.11	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
SWT1_chr1_185152167_185296781	185194532	T T	TTGCTGTT others(12): Show TTGCTGTTGTATATATTGTC	intron_variant intron_variant	MODIFIER	NA19072.hp2 NA19072.hp2	a0005 a0005	a0005c0007 a0005c0007	a0005c0007t0001 a0005c0007t0001	a0005c0007t0001g0312 a0005c0007t0001g0312	1	324	0.0031	19	c.152 others(38): Show c.1523+3891_1523+3909dupTGCTGTTGTATATATTGTC	SWT1	ENSG00000116668.13	transcript	ENST00000367500.9	protein_coding	10/18		INFO_REALIGN_3_PRIME	chr1	TogoVar
SWT1_chr1_185152167_185296781	185271530	T T	TTGTCAGT others(12): Show TTGTCAGTGACAAGTGAATA	intron_variant intron_variant	MODIFIER	HG02293.hp2 HG02293.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0015 a0001c0001t0001g0015	1	324	0.0031	19	c.250 others(36): Show c.2508+152_2508+153insAGTGAATATGTCAGTGACA	SWT1	ENSG00000116668.13	transcript	ENST00000367500.9	protein_coding	17/18		INFO_REALIGN_3_PRIME	chr1	TogoVar
SYBU_chr8_109568978_109649822	109615997	C C	CTTTCTTT others(12): Show CTTTCTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG02132.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0013 a0001c0001t0001g0013	1	205	0.0049	19	c.427 others(36): Show c.427+2844_427+2845insAAAAAAAAAAAAAAAGAAA	SYBU	ENSG00000147642.17	transcript	ENST00000276646.14	protein_coding	3/6			chr8	TogoVar
SYCE1L_chr16_77194408_77218215	77215742	C C	CTCTTTTT others(12): Show CTCTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01361.hp1 NA18948.hp2 NA18961.hp2 others(3): Show HG01361.hp1 NA18948.hp2 NA18961.hp2 NA18982.hp2 NA18993.hp1 NA18997.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0002 a0001c0002t0001g0074 a0001c0002t0001g0081 a0001c0002t0001g0002 a0001c0002t0001g0074 a0001c0002t0001g0081	6	7	0.8571	19	c.28 others(30): Show c.2811_*2812insTCTTTTTTTTTTTTTTTTT	SYCE1L	ENSG00000205078.6	transcript	ENST00000378644.5	protein_coding		2528		chr16	TogoVar
SYCE2_chr19_12893786_12924293	12920125	A A	ACACACAC others(12): Show ACACACACACACACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00280.hp2 HG00323.hp2 others(36): Show HG00280.hp1 HG00280.hp2 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG01074.hp2 HG01175.hp1 HG01192.hp2 HG01346.hp1 HG01433.hp2 HG01516.hp2 HG01975.hp1 HG02738.hp1 HG02922.hp2 HG02976.hp1 HG03017.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03654.hp2 HG03942.hp2 NA18522.hp1 NA18942.hp2 NA18944.hp2 NA18947.hp1 NA18950.hp1 NA18962.hp1 NA18969.hp1 NA18973.hp2 NA18982.hp2 NA18987.hp1 NA18998.hp1 NA18998.hp2 NA19004.hp2 NA19010.hp1 NA19011.hp2 NA19068.hp1 NA19084.hp2 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0010 others(32): Show a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0015 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0057 a0001c0001t0001g0061 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0072 a0001c0001t0001g0076 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0086 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0098 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0145 a0001c0001t0001g0153 a0001c0001t0001g0165 a0001c0001t0001g0169 a0001c0001t0001g0180 a0001c0001t0001g0184	39	171	0.2281	19	c.-86 others(28): Show c.-869_-868insGTGTGTGTGTGTGTGTGTG	SYCE2	ENSG00000161860.8	transcript	ENST00000293695.8	protein_coding		833		chr19	TogoVar
SYCP1_chr1_114849863_115000370	114857136	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0128 a0002c0004t0001g0128	1	144	0.0069	19	c.194 others(32): Show c.194-93_194-75dupAAAAAAAAAAAAAAAAAAA	SYCP1	ENSG00000198765.12	transcript	ENST00000369522.8	protein_coding	3/31		INFO_REALIGN_3_PRIME	chr1	TogoVar
SYCP2L_chr6_10882052_10979309	10883180	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02698.hp2 HG02698.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0105 a0001c0002t0001g0105	1	46	0.0217	19	c.-39 others(30): Show c.-3947_-3946insTTTTTTTTTTTTTTTTTTT	SYCP2L	ENSG00000153157.14	transcript	ENST00000283141.11	protein_coding		3871		chr6	TogoVar
SYCP2L_chr6_10882052_10979309	10907892	G G	GTTTTTTT others(12): Show GTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00544.hp1 HG00735.hp1 others(33): Show HG00099.hp2 HG00544.hp1 HG00735.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01517.hp1 HG01517.hp2 HG02074.hp2 HG02132.hp1 HG02280.hp2 HG02523.hp1 HG02683.hp1 HG02717.hp2 HG02896.hp2 HG03017.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03669.hp1 HG03669.hp2 HG04204.hp1 NA18747.hp2 NA18946.hp1 NA18947.hp2 NA18953.hp2 NA18955.hp1 NA18955.hp2 NA18957.hp2 NA18968.hp1 NA18970.hp2 NA18980.hp2 NA20752.hp2 NA21309.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0005 a0007 a0008	a0001c0001 a0001c0013 a0002c0003 others(5): Show a0001c0001 a0001c0013 a0002c0003 a0003c0004 a0005c0008 a0005c0009 a0007c0010 a0008c0019	a0001c0001t0001 a0001c0001t0002 a0001c0013t0001 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0013t0001 a0002c0003t0001 a0002c0003t0002 a0003c0004t0001 a0005c0008t0001 a0005c0009t0002 a0007c0010t0001 a0008c0019t0001	a0001c0001t0001g0025 a0001c0001t0001g0050 a0001c0001t0001g0076 others(33): Show a0001c0001t0001g0025 a0001c0001t0001g0050 a0001c0001t0001g0076 a0001c0001t0001g0130 a0001c0001t0001g0133 a0001c0001t0001g0151 a0001c0001t0001g0153 a0001c0001t0001g0183 a0001c0001t0001g0339 a0001c0001t0002g0091 a0001c0001t0002g0161 a0001c0001t0002g0169 a0001c0001t0002g0230 a0001c0001t0002g0336 a0001c0013t0001g0038 a0002c0003t0001g0137 a0002c0003t0001g0287 a0002c0003t0001g0294 a0002c0003t0001g0295 a0002c0003t0002g0017 a0002c0003t0002g0249 a0002c0003t0002g0328 a0002c0003t0002g0329 a0003c0004t0001g0046 a0003c0004t0001g0125 a0003c0004t0001g0277 a0003c0004t0001g0348 a0005c0008t0001g0272 a0005c0009t0002g0073 a0005c0009t0002g0074 a0005c0009t0002g0082 a0005c0009t0002g0216 a0007c0010t0001g0288 a0007c0010t0001g0292 a0007c0010t0001g0311 a0008c0019t0001g0178	36	53	0.6792	19	c.819 others(34): Show c.819+226_819+227insTTTTTTTTTTTTTTTTTTT	SYCP2L	ENSG00000153157.14	transcript	ENST00000283141.11	protein_coding	10/29		INFO_REALIGN_3_PRIME	chr6	TogoVar
SYCP2L_chr6_10882052_10979309	10911894	C C	CTTTCTTT others(12): Show CTTTCTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG02647.hp1 HG02922.hp2 HG01106.hp2 HG02647.hp1 HG02922.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0003 a0004c0005 a0001c0001 a0002c0003 a0004c0005	a0001c0001t0001 a0002c0003t0001 a0004c0005t0002 a0001c0001t0001 a0002c0003t0001 a0004c0005t0002	a0001c0001t0001g0193 a0002c0003t0001g0305 a0004c0005t0002g0018 a0001c0001t0001g0193 a0002c0003t0001g0305 a0004c0005t0002g0018	3	26	0.1154	19	c.919 others(34): Show c.919-776_919-775insCTTTTTTTTTTTTTTTTTT	SYCP2L	ENSG00000153157.14	transcript	ENST00000283141.11	protein_coding	12/29		INFO_REALIGN_3_PRIME	chr6	TogoVar
SYCP2L_chr6_10882052_10979309	10978306	T T	TATATATA others(12): Show TATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03195.hp1 HG03834.hp1 NA20300.hp1 HG03195.hp1 HG03834.hp1 NA20300.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0003 a0004c0005 a0001c0001 a0002c0003 a0004c0005	a0001c0001t0001 a0002c0003t0001 a0004c0005t0001 a0001c0001t0001 a0002c0003t0001 a0004c0005t0001	a0001c0001t0001g0338 a0002c0003t0001g0011 a0004c0005t0001g0132 a0001c0001t0001g0338 a0002c0003t0001g0011 a0004c0005t0001g0132	3	204	0.0147	19	c.43 others(30): Show c.4392_*4393insATATATATATATATATATA	SYCP2L	ENSG00000153157.14	transcript	ENST00000283141.11	protein_coding		3998		chr6	TogoVar
SYCP2L_chr6_10882052_10979309	10978306	T T	TGTATATA others(12): Show TGTATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0308 a0002c0003t0001g0308	1	202	0.0050	19	c.43 others(30): Show c.4392_*4393insGTATATATATATATATATA	SYCP2L	ENSG00000153157.14	transcript	ENST00000283141.11	protein_coding		3998		chr6	TogoVar
SYCP2_chr20_59858571_59938637	59876369	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02074.hp1 HG02074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0218 a0001c0001t0001g0218	1	26	0.0385	19	c.315 others(36): Show c.3151-919_3151-901dupTTTTTTTTTTTTTTTTTTT	SYCP2	ENSG00000196074.13	transcript	ENST00000357552.8	protein_coding	33/44			chr20	TogoVar
SYCP3_chr12_101723648_101744462	101735871	A A	ATATATAT others(12): Show ATATATATTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01167.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0166 a0001c0001t0005g0166	1	120	0.0083	19	c.236 others(34): Show c.236-828_236-827insAAAAAAAAAAAAATATATA	SYCP3	ENSG00000139351.15	transcript	ENST00000392924.2	protein_coding	4/8			chr12	TogoVar
SYK_chr9_90796819_90903549	90802815	T T	TAAAAAAA others(12): Show TAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00673.hp1 HG00673.hp2 others(22): Show HG00597.hp1 HG00673.hp1 HG00673.hp2 HG01192.hp1 HG01891.hp1 HG02055.hp1 HG02257.hp1 HG02257.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02622.hp2 HG02723.hp2 HG02886.hp2 HG02965.hp1 HG03130.hp2 HG03453.hp1 HG03688.hp2 HG03831.hp2 HG03942.hp1 NA18906.hp1 NA19011.hp2 NA19056.hp1 NA20129.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(17): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0009 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0001c0001t0021 a0001c0001t0026 a0001c0002t0016 a0001c0002t0021 a0001c0002t0025 a0001c0002t0062 a0001c0003t0003 a0001c0005t0004 a0001c0006t0002 a0001c0008t0037 a0001c0008t0038	a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0078 others(22): Show a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0002g0080 a0001c0001t0003g0076 a0001c0001t0005g0085 a0001c0001t0006g0068 a0001c0001t0006g0082 a0001c0001t0009g0065 a0001c0001t0014g0073 a0001c0001t0014g0083 a0001c0001t0015g0087 a0001c0001t0016g0071 a0001c0001t0021g0086 a0001c0001t0026g0072 a0001c0002t0016g0077 a0001c0002t0021g0084 a0001c0002t0025g0070 a0001c0002t0062g0069 a0001c0003t0003g0064 a0001c0005t0004g0081 a0001c0006t0002g0088 a0001c0008t0037g0067 a0001c0008t0038g0066	25	28	0.8929	19	c.-42 others(34): Show c.-42+934_-42+935insAAAAAAAAAAAAAAAAAAA	SYK	ENSG00000165025.15	transcript	ENST00000375754.9	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr9	TogoVar
SYN3_chr22_32502820_33063381	32679839	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00738.hp1 HG00738.hp2 others(8): Show HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp2 HG02886.hp2 HG03017.hp2 HG03239.hp2 HG03688.hp2 HG03704.hp2 HG03927.hp1 HG03927.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0015 a0001c0001t0033 a0001c0001t0054 a0001c0001t0065 a0001c0001t0073	a0001c0001t0001g0020 a0001c0001t0001g0056 a0001c0001t0002g0018 others(8): Show a0001c0001t0001g0020 a0001c0001t0001g0056 a0001c0001t0002g0018 a0001c0001t0003g0070 a0001c0001t0008g0133 a0001c0001t0008g0134 a0001c0001t0015g0132 a0001c0001t0033g0148 a0001c0001t0054g0002 a0001c0001t0065g0076 a0001c0001t0073g0175	11	16	0.6875	19	c.712 others(38): Show c.712-83122_712-83104dupAAAAAAAAAAAAAAAAAAA	SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	6/13			chr22	TogoVar
SYN3_chr22_32502820_33063381	32710645	A A	AAAAAAAA others(12): Show AAAAAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG00741.hp1 HG01258.hp1 others(14): Show HG00621.hp2 HG00741.hp1 HG01258.hp1 HG01261.hp2 HG01496.hp1 HG01978.hp1 HG01978.hp2 HG02056.hp2 HG02071.hp2 HG02572.hp1 HG03195.hp1 HG03540.hp1 HG03579.hp1 NA18969.hp1 NA18969.hp2 NA18984.hp2 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0010 a0001c0001t0012 a0001c0001t0025 a0001c0001t0026 a0001c0001t0031 a0001c0001t0042 a0001c0001t0057 a0001c0001t0060 a0002c0002t0011	a0001c0001t0001g0117 a0001c0001t0002g0037 a0001c0001t0003g0125 others(14): Show a0001c0001t0001g0117 a0001c0001t0002g0037 a0001c0001t0003g0125 a0001c0001t0003g0151 a0001c0001t0005g0158 a0001c0001t0007g0172 a0001c0001t0010g0094 a0001c0001t0012g0053 a0001c0001t0012g0115 a0001c0001t0025g0044 a0001c0001t0026g0026 a0001c0001t0026g0171 a0001c0001t0031g0143 a0001c0001t0042g0088 a0001c0001t0057g0168 a0001c0001t0060g0129 a0002c0002t0011g0061	17	129	0.1318	19	c.712 others(40): Show c.712-113910_712-113909insCTTTTTTTTTTTTTTTTTT	SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	6/13			chr22	TogoVar
SYN3_chr22_32502820_33063381	32770850	G G	GCACATAT others(12): Show GCACATATGTGTTCAATTAA	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00323.hp2 HG00621.hp2 others(104): Show HG00323.hp1 HG00323.hp2 HG00621.hp2 HG00673.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01109.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01258.hp2 HG01261.hp2 HG01496.hp1 HG01884.hp2 HG02040.hp1 HG02055.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02145.hp1 HG02145.hp2 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02738.hp1 HG02738.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03669.hp2 HG03704.hp1 HG03831.hp2 HG03927.hp2 HG04184.hp1 HG04184.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp1 NA18906.hp2 NA18984.hp1 NA18995.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19063.hp1 NA19065.hp2 NA19088.hp1 NA19088.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20752.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0004 others(4): Show a0001c0001 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(67): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0024 a0001c0001t0026 a0001c0001t0028 a0001c0001t0030 a0001c0001t0031 a0001c0001t0032 a0001c0001t0033 a0001c0001t0034 a0001c0001t0038 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0001c0001t0044 a0001c0001t0045 a0001c0001t0047 a0001c0001t0053 a0001c0001t0057 a0001c0001t0060 a0001c0001t0062 a0001c0001t0063 a0001c0001t0064 a0001c0001t0065 a0001c0001t0066 a0001c0001t0067 a0001c0001t0068 a0001c0001t0069 a0001c0001t0070 a0001c0001t0072 a0001c0001t0077 a0001c0001t0078 a0001c0001t0079 a0001c0003t0004 a0001c0003t0005 a0001c0003t0037 a0001c0003t0052 a0001c0004t0017 a0001c0004t0035 a0001c0004t0036 a0001c0004t0056 a0001c0005t0029 a0001c0006t0007 a0001c0007t0080 a0002c0002t0002 a0002c0002t0004 a0002c0002t0005 a0002c0002t0011 a0002c0002t0023 a0002c0002t0048 a0002c0002t0051 a0002c0002t0055	a0001c0001t0001g0011 a0001c0001t0001g0020 a0001c0001t0001g0029 others(104): Show a0001c0001t0001g0011 a0001c0001t0001g0020 a0001c0001t0001g0029 a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0048 a0001c0001t0001g0051 a0001c0001t0001g0056 a0001c0001t0001g0097 a0001c0001t0002g0024 a0001c0001t0002g0118 a0001c0001t0003g0017 a0001c0001t0003g0039 a0001c0001t0003g0107 a0001c0001t0003g0157 a0001c0001t0003g0176 a0001c0001t0005g0158 a0001c0001t0006g0012 a0001c0001t0007g0079 a0001c0001t0007g0082 a0001c0001t0007g0172 a0001c0001t0008g0075 a0001c0001t0008g0134 a0001c0001t0009g0019 a0001c0001t0009g0067 a0001c0001t0010g0087 a0001c0001t0010g0094 a0001c0001t0010g0166 a0001c0001t0011g0109 a0001c0001t0012g0115 a0001c0001t0012g0131 a0001c0001t0012g0173 a0001c0001t0013g0121 a0001c0001t0013g0135 a0001c0001t0014g0060 a0001c0001t0014g0099 a0001c0001t0015g0043 a0001c0001t0016g0064 a0001c0001t0018g0106 a0001c0001t0019g0030 a0001c0001t0019g0092 a0001c0001t0020g0022 a0001c0001t0020g0156 a0001c0001t0021g0063 a0001c0001t0021g0149 a0001c0001t0024g0147 a0001c0001t0026g0171 a0001c0001t0028g0054 a0001c0001t0030g0028 a0001c0001t0031g0143 a0001c0001t0032g0150 a0001c0001t0033g0148 a0001c0001t0034g0108 a0001c0001t0038g0038 a0001c0001t0039g0144 a0001c0001t0040g0153 a0001c0001t0041g0096 a0001c0001t0042g0088 a0001c0001t0044g0077 a0001c0001t0045g0068 a0001c0001t0047g0091 a0001c0001t0053g0041 a0001c0001t0057g0168 a0001c0001t0060g0129 a0001c0001t0062g0181 a0001c0001t0063g0093 a0001c0001t0064g0080 a0001c0001t0065g0076 a0001c0001t0066g0052 a0001c0001t0067g0050 a0001c0001t0068g0122 a0001c0001t0069g0126 a0001c0001t0070g0006 a0001c0001t0072g0031 a0001c0001t0077g0013 a0001c0001t0078g0003 a0001c0001t0079g0004 a0001c0003t0004g0040 a0001c0003t0004g0105 a0001c0003t0005g0098 a0001c0003t0005g0102 a0001c0003t0037g0103 a0001c0003t0052g0104 a0001c0004t0017g0055 a0001c0004t0017g0095 a0001c0004t0035g0066 a0001c0004t0036g0010 a0001c0004t0056g0021 a0001c0005t0029g0116 a0001c0006t0007g0074 a0001c0007t0080g0112 a0002c0002t0002g0085 a0002c0002t0004g0027 a0002c0002t0004g0059 a0002c0002t0004g0110 a0002c0002t0004g0111 a0002c0002t0004g0152 a0002c0002t0004g0154 a0002c0002t0004g0159 a0002c0002t0005g0141 a0002c0002t0011g0061 a0002c0002t0011g0100 a0002c0002t0023g0119 a0002c0002t0023g0164 a0002c0002t0048g0084 a0002c0002t0051g0142 a0002c0002t0055g0062	107	184	0.5815	19	c.711 others(38): Show c.711+94046_711+94064dupTTAATTGAACACATATGTG	SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	6/13			chr22	TogoVar
SYNCRIP_chr6_85608976_85647886	85623562	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0216 a0001c0001t0001g0216	1	95	0.0105	19	c.802 others(34): Show c.802+396_802+414dupTTTTTTTTTTTTTTTTTTT	SYNCRIP	ENSG00000135316.20	transcript	ENST00000369622.8	protein_coding	7/10			chr6	TogoVar
SYNCRIP_chr6_85608976_85647886	85631339	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0116 a0001c0001t0001g0116	1	181	0.0055	19	c.666 others(36): Show c.666+5627_666+5628insTTTTTTTTTTTTTTTTTTT	SYNCRIP	ENSG00000135316.20	transcript	ENST00000369622.8	protein_coding	6/10			chr6	TogoVar
SYNE2_chr14_63848004_64231433	63919972	G G	GTTTTTTT others(12): Show GTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01496.hp2 HG02280.hp2 others(6): Show HG01109.hp2 HG01496.hp2 HG02280.hp2 HG03209.hp1 HG03490.hp1 HG03490.hp2 HG03492.hp2 NA18980.hp1 NA20905.hp2	a0003 a0011 a0015 others(3): Show a0003 a0011 a0015 a0031 a0041 a0053	a0003c0015 a0011c0017 a0011c0043 others(4): Show a0003c0015 a0011c0017 a0011c0043 a0015c0016 a0031c0038 a0041c0039 a0053c0047	a0003c0015t0002 a0011c0017t0003 a0011c0043t0001 others(5): Show a0003c0015t0002 a0011c0017t0003 a0011c0043t0001 a0015c0016t0001 a0015c0016t0005 a0031c0038t0002 a0041c0039t0004 a0053c0047t0003	a0003c0015t0002g0011 a0011c0017t0003g0025 a0011c0017t0003g0088 others(6): Show a0003c0015t0002g0011 a0011c0017t0003g0025 a0011c0017t0003g0088 a0011c0043t0001g0089 a0015c0016t0001g0150 a0015c0016t0005g0148 a0031c0038t0002g0028 a0041c0039t0004g0067 a0053c0047t0003g0090	9	85	0.1059	19	c.79+ others(36): Show c.79+10746_79+10764dupTTTTTTTTTTTTTTTTTTT	SYNE2	ENSG00000054654.20	transcript	ENST00000555002.6	protein_coding	2/115		INFO_REALIGN_3_PRIME	chr14	TogoVar
SYNE2_chr14_63848004_64231433	64100531	A A	AAAAAAAA others(12): Show AAAAAAAAAAATATATATAT	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0027 a0027	a0027c0056 a0027c0056	a0027c0056t0001 a0027c0056t0001	a0027c0056t0001g0136 a0027c0056t0001g0136	1	87	0.0115	19	c.123 others(40): Show c.12382-1400_12382-1399insAAAAAAAAATATATATATA	SYNE2	ENSG00000054654.20	transcript	ENST00000555002.6	protein_coding	63/115		INFO_REALIGN_3_PRIME	chr14	TogoVar
SYNE3_chr14_95402266_95521650	95479224	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG01346.hp1 HG01934.hp1 others(3): Show HG01168.hp1 HG01346.hp1 HG01934.hp1 HG01952.hp2 HG02293.hp2 NA18957.hp1	a0002 a0003 a0004 others(1): Show a0002 a0003 a0004 a0034	a0002c0002 a0003c0004 a0003c0006 others(2): Show a0002c0002 a0003c0004 a0003c0006 a0004c0003 a0034c0065	a0002c0002t0016 a0003c0004t0112 a0003c0006t0016 others(3): Show a0002c0002t0016 a0003c0004t0112 a0003c0006t0016 a0003c0006t0165 a0004c0003t0028 a0034c0065t0025	a0002c0002t0016g0271 a0003c0004t0112g0356 a0003c0006t0016g0254 others(3): Show a0002c0002t0016g0271 a0003c0004t0112g0356 a0003c0006t0016g0254 a0003c0006t0165g0250 a0004c0003t0028g0349 a0034c0065t0025g0215	6	107	0.0561	19	c.-14 others(36): Show c.-14-3408_-14-3390dupTTTTTTTTTTTTTTTTTTT	SYNE3	ENSG00000176438.13	transcript	ENST00000682763.1	protein_coding	1/17			chr14	TogoVar
SYNPO2_chr4_118883854_119066247	118890697	T T	TCTCTCTC others(12): Show TCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0004 a0004	a0004c0010 a0004c0010	a0004c0010t0011 a0004c0010t0011	a0004c0010t0011g0040 a0004c0010t0011g0040	1	103	0.0097	19	c.105 others(36): Show c.105+1556_105+1557insCTCTCTCTCTCTCTCTCTC	SYNPO2	ENSG00000172403.11	transcript	ENST00000307142.9	protein_coding	1/4			chr4	TogoVar
SYNPR_chr3_63273308_63621924	63408319	G G	GGAAGGAA others(12): Show GGAAGGAAGAAAGAAAGAAA	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00597.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0128 a0001c0001t0002g0128	1	60	0.0167	19	c.85- others(36): Show c.85-72510_85-72509insGGAAGAAAGAAAGAAAGAA	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNPR_chr3_63273308_63621924	63408352	G G	GAAAGAAA others(12): Show GAAAGAAAGAAAAGAAAAGA	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0026 a0001c0001t0005g0026	1	245	0.0041	19	c.85- others(36): Show c.85-72469_85-72468insAGAAAAGAAAAGAAAGAAA	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNPR_chr3_63273308_63621924	63540930	A A	ACACACAC others(12): Show ACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG02004.hp1 HG02896.hp2 others(1): Show HG00099.hp2 HG02004.hp1 HG02896.hp2 HG02897.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0156 a0001c0001t0001g0175 a0001c0001t0002g0027 others(1): Show a0001c0001t0001g0156 a0001c0001t0001g0175 a0001c0001t0002g0027 a0001c0001t0002g0096	4	148	0.0270	19	c.210 others(38): Show c.210-15613_210-15612insCACACACACACACACACAC	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	3/5			chr3	TogoVar
SYNPR_chr3_63273308_63621924	63606417	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01433.hp2 HG01515.hp1 others(5): Show HG01433.hp1 HG01433.hp2 HG01515.hp1 HG02897.hp2 HG03490.hp1 NA18951.hp1 NA19007.hp1 NA19088.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0002c0002t0003	a0001c0001t0001g0175 a0001c0001t0003g0087 a0001c0001t0003g0142 others(5): Show a0001c0001t0001g0175 a0001c0001t0003g0087 a0001c0001t0003g0142 a0001c0001t0003g0174 a0001c0001t0003g0181 a0001c0001t0003g0194 a0001c0001t0004g0243 a0002c0002t0003g0139	8	92	0.0870	19	c.409 others(36): Show c.409-2704_409-2686dupTTTTTTTTTTTTTTTTTTT	SYNPR	ENSG00000163630.11	transcript	ENST00000478300.6	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
SYNRG_chr17_37509807_37614418	37511585	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0005 a0001c0005t0005	a0001c0005t0005g0278 a0001c0005t0005g0278	1	41	0.0244	19	c.73 others(30): Show c.7354_*7355insAAAAAAAAAAAAAAAAAAA	SYNRG	ENSG00000275066.5	transcript	ENST00000612223.5	protein_coding		3221		chr17	TogoVar
SYNRG_chr17_37509807_37614418	37511937	A A	AGTTTTTT others(12): Show AGTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp2 HG01081.hp1 HG01884.hp2 others(11): Show HG00639.hp2 HG01081.hp1 HG01884.hp2 HG03471.hp1 HG03654.hp1 HG03831.hp1 NA18953.hp2 NA18980.hp1 NA18984.hp1 NA18999.hp1 NA19001.hp1 NA19068.hp2 NA19079.hp1 NA20129.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0014 a0002c0002t0002 a0002c0002t0014	a0002c0002t0002g0166 a0002c0002t0002g0168 a0002c0002t0002g0204 others(11): Show a0002c0002t0002g0166 a0002c0002t0002g0168 a0002c0002t0002g0204 a0002c0002t0002g0211 a0002c0002t0002g0213 a0002c0002t0002g0214 a0002c0002t0002g0215 a0002c0002t0002g0223 a0002c0002t0002g0242 a0002c0002t0002g0253 a0002c0002t0002g0256 a0002c0002t0002g0261 a0002c0002t0002g0328 a0002c0002t0014g0251	14	263	0.0532	19	c.70 others(30): Show c.7002_*7003insAAAAAAAAAAAAAAAAAAC	SYNRG	ENSG00000275066.5	transcript	ENST00000612223.5	protein_coding		2869		chr17	TogoVar
SYPL1_chr7_106085505_106117312	106112614	T T	TGGGCCCG others(12): Show TGGGCCCGCGCCGCGCTTCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0165 a0001c0001t0001g0165	1	396	0.0025	19	c.-40 others(28): Show c.-407_-406insGGAAGCGCGGCGCGGGCCC	SYPL1	ENSG00000008282.10	transcript	ENST00000455385.7	protein_coding		303		chr7	TogoVar
SYT12_chr11_67018134_67055863	67035837	C C	CCTTCCTT others(12): Show CCTTCCTTCTTCCTTCCTTT	intron_variant intron_variant	MODIFIER	NA18974.hp1 NA18974.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0232 a0001c0001t0019g0232	1	187	0.0053	19	c.228 others(36): Show c.228+1002_228+1003insCCTTCTTCCTTCCTTTCTT	SYT12	ENSG00000173227.14	transcript	ENST00000527043.6	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr11	TogoVar
SYT14_chr1_209933217_210176315	210000613	C C	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG02015.hp1 NA18965.hp1 others(1): Show HG01346.hp1 HG02015.hp1 NA18965.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0003 a0001c0001t0069 a0001c0001t0070 others(1): Show a0001c0001t0003 a0001c0001t0069 a0001c0001t0070 a0001c0004t0041	a0001c0001t0003g0149 a0001c0001t0069g0115 a0001c0001t0070g0116 others(1): Show a0001c0001t0003g0149 a0001c0001t0069g0115 a0001c0001t0070g0116 a0001c0004t0041g0335	4	118	0.0339	19	c.62- others(36): Show c.62-13019_62-13001dupTTTTTTTTTTTTTTTTTTT	SYT14	ENSG00000143469.21	transcript	ENST00000367019.6	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr1	TogoVar
SYT14_chr1_209933217_210176315	210052665	C C	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG02965.hp2 HG03225.hp1 HG02897.hp1 HG02965.hp2 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0039 a0001c0001t0022 a0001c0001t0039	a0001c0001t0022g0351 a0001c0001t0039g0298 a0001c0001t0039g0299 a0001c0001t0022g0351 a0001c0001t0039g0298 a0001c0001t0039g0299	3	115	0.0261	19	c.442 others(38): Show c.442+31412_442+31430dupAAAAAAAAAAAAAAAAAAA	SYT14	ENSG00000143469.21	transcript	ENST00000367019.6	protein_coding	4/8		INFO_REALIGN_3_PRIME	chr1	TogoVar
SYT2_chr1_202585596_202715454	202670177	T T	TAGAATTT others(12): Show TAGAATTTAGCCTCTCTGCA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00140.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0216 a0001c0003t0003g0216	1	274	0.0036	19	c.-18 others(38): Show c.-18+40062_-18+40080dupTGCAGAGAGGCTAAATTCT	SYT2	ENSG00000143858.12	transcript	ENST00000367268.5	protein_coding	1/8			chr1	TogoVar
SYT5_chr19_55166196_55185289	55167634	A A	AAAAAAAA others(12): Show AAAAAAAAAAAAGAAAAAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp2 HG00438.hp2 HG00544.hp2 others(78): Show HG00408.hp2 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00642.hp2 HG00673.hp1 HG00733.hp2 HG00738.hp1 HG00738.hp2 HG01106.hp2 HG01258.hp2 HG01358.hp1 HG01361.hp1 HG01433.hp1 HG01496.hp2 HG01928.hp1 HG01928.hp2 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG02004.hp2 HG02071.hp1 HG02074.hp2 HG02080.hp1 HG02109.hp2 HG02148.hp1 HG02148.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02451.hp1 HG02572.hp2 HG02683.hp2 HG02809.hp2 HG02818.hp1 HG02897.hp2 HG03471.hp2 HG03491.hp1 HG03669.hp1 HG03688.hp2 HG03831.hp2 HG03927.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18942.hp1 NA18943.hp1 NA18945.hp2 NA18948.hp2 NA18950.hp1 NA18952.hp2 NA18954.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18959.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp2 NA18975.hp2 NA18983.hp1 NA18991.hp2 NA18994.hp1 NA18998.hp2 NA19003.hp1 NA19007.hp2 NA19010.hp1 NA19043.hp1 NA19060.hp1 NA19060.hp2 NA19064.hp1 NA19065.hp2 NA19066.hp2 NA19068.hp2 NA19074.hp2 NA19076.hp1 NA19086.hp1 NA19089.hp2 NA19091.hp2 NA20129.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0007 others(2): Show a0001c0001 a0001c0002 a0001c0007 a0001c0012 a0005c0008	a0001c0001t0028 a0001c0001t0050 a0001c0002t0002 others(6): Show a0001c0001t0028 a0001c0001t0050 a0001c0002t0002 a0001c0002t0014 a0001c0002t0035 a0001c0002t0037 a0001c0007t0021 a0001c0012t0036 a0005c0008t0002	a0001c0001t0028g0058 a0001c0001t0050g0121 a0001c0002t0002g0002 others(12): Show a0001c0001t0028g0058 a0001c0001t0050g0121 a0001c0002t0002g0002 a0001c0002t0002g0005 a0001c0002t0002g0006 a0001c0002t0002g0015 a0001c0002t0002g0023 a0001c0002t0002g0067 a0001c0002t0002g0072 a0001c0002t0014g0016 a0001c0002t0035g0071 a0001c0002t0037g0068 a0001c0007t0021g0042 a0001c0012t0036g0073 a0005c0008t0002g0031	81	313	0.2588	19	c.58 others(30): Show c.5849_*5850insCTTTTTTCTTTTTTTTTTT	SYT5	ENSG00000129990.15	transcript	ENST00000354308.8	protein_coding		3561		chr19	TogoVar

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