view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAB2_chr11_78210293_78422820 | 78383581 | C | CAAAAAAA others(12): Show |
intron_variant | MODIFIER | HG00642.hp2 HG01070.hp1 HG01516.hp1 others(19): Show |
a0001a0002 | a0001c0002a0001c0003a0001c0005others(3): Show | a0001c0002t0002a0001c0002t0005a0001c0002t0011others(8): Show | a0001c0002t0002g0001 a0001c0002t0002g0016 a0001c0002t0002g0018 others(19): Show |
22 | 174 | 0.1264 | 19 | c.75+ others(36): Show |
GAB2 | ENSG00000033327.13 | transcript | ENST00000361507.5 | protein_coding | 1/9 | chr11 | TogoVar | |||||||
GABBR2_chr9_98283109_98713935 | 98492349 | T | TAAAAAAA others(12): Show |
intron_variant | MODIFIER | HG00597.hp2 HG02976.hp1 HG03486.hp2 others(1): Show |
a0001a0002 | a0001c0002a0001c0024a0002c0012others(1): Show | a0001c0002t0001a0001c0024t0001a0002c0012t0007others(1): Show | a0001c0002t0001g0104 a0001c0024t0001g0120 a0002c0012t0007g0073 others(1): Show |
4 | 14 | 0.2857 | 19 | c.732 others(36): Show |
GABBR2 | ENSG00000136928.7 | transcript | ENST00000259455.4 | protein_coding | 4/18 | chr9 | TogoVar | |||||||
GABBR2_chr9_98283109_98713935 | 98555997 | T | TGGGAGAC others(12): Show |
intron_variant | MODIFIER | HG00621.hp2 HG00738.hp1 HG01106.hp1 others(7): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0003a0001c0001t0017a0001c0002t0001others(6): Show | a0001c0001t0003g0121 a0001c0001t0017g0109 a0001c0002t0001g0118 others(7): Show |
10 | 162 | 0.0617 | 19 | c.460 others(38): Show |
GABBR2 | ENSG00000136928.7 | transcript | ENST00000259455.4 | protein_coding | 2/18 | chr9 | TogoVar | |||||||
GABBR2_chr9_98283109_98713935 | 98713794 | T | TAAAAAAA others(12): Show |
upstream_gene_variant | MODIFIER | HG00741.hp1 NA18994.hp1 |
a0001a0002 | a0001c0003a0002c0010 | a0001c0003t0017a0002c0010t0005 | a0001c0003t0017g0084 a0002c0010t0005g0106 |
2 | 48 | 0.0417 | 19 | c.-50 others(30): Show |
GABBR2 | ENSG00000136928.7 | transcript | ENST00000259455.4 | protein_coding | 4860 | chr9 | TogoVar | |||||||
GABPB1_chr15_50270389_50360198 | 50282560 | G | GAAAAAAA others(12): Show |
intron_variant | MODIFIER | HG01256.hp2 HG01258.hp2 HG02257.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0010 | a0001c0001t0004g0261 a0001c0001t0004g0268 a0001c0001t0004g0269 others(5): Show |
8 | 159 | 0.0503 | 19 | c.999 others(36): Show |
GABPB1 | ENSG00000104064.18 | transcript | ENST00000380877.8 | protein_coding | 8/8 | chr15 | TogoVar | |||||||
GABPB1_chr15_50270389_50360198 | 50337129 | A | ATATATAT others(12): Show |
intron_variant | MODIFIER | NA18747.hp2 NA19077.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0172 a0001c0001t0001g0197 |
2 | 317 | 0.0063 | 19 | c.-1+ others(36): Show |
GABPB1 | ENSG00000104064.18 | transcript | ENST00000380877.8 | protein_coding | 1/8 | chr15 | TogoVar | |||||||
GABPB2_chr1_151065761_151130542 | 151104775 | C | CTCTTCTT others(12): Show |
intron_variant | MODIFIER | HG01516.hp1 | a0001 | a0001c0001 | a0001c0001t0083 | a0001c0001t0083g0159 | 1 | 244 | 0.0041 | 19 | c.736 others(36): Show |
GABPB2 | ENSG00000143458.12 | transcript | ENST00000368918.8 | protein_coding | 6/8 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
GABPB2_chr1_151065761_151130542 | 151104802 | T | TTTCTTTC others(12): Show |
intron_variant | MODIFIER | HG00673.hp2 HG00733.hp1 HG00735.hp1 others(22): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0009others(12): Show | a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0175 others(22): Show |
25 | 103 | 0.2427 | 19 | c.736 others(36): Show |
GABPB2 | ENSG00000143458.12 | transcript | ENST00000368918.8 | protein_coding | 6/8 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
GABRA3_chrX_152161234_152456315 | 152182674 | C | CTATATAT others(12): Show |
intron_variant | MODIFIER | HG03490.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0024 | 1 | 200 | 0.0050 | 19 | c.114 others(38): Show |
GABRA3 | ENSG00000011677.13 | transcript | ENST00000370314.9 | protein_coding | 9/9 | chrX | TogoVar | |||||||
GABRB1_chr4_47026567_47431447 | 47028815 | G | GTATATAT others(12): Show |
upstream_gene_variant | MODIFIER | HG01261.hp2 HG02056.hp2 HG04115.hp1 others(8): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(1): Show | a0001c0001t0001g0061 a0001c0001t0001g0063 a0001c0001t0001g0064 others(8): Show |
11 | 156 | 0.0705 | 19 | c.-28 others(30): Show |
GABRB1 | ENSG00000163288.14 | transcript | ENST00000295454.8 | protein_coding | 2751 | chr4 | TogoVar | |||||||
GABRB2_chr5_161283436_161551725 | 161416696 | C | CAAAAAAA others(12): Show |
intron_variant | MODIFIER | HG01975.hp2 NA19085.hp1 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0055 a0001c0001t0002g0110 |
2 | 18 | 0.1111 | 19 | c.459 others(36): Show |
GABRB2 | ENSG00000145864.14 | transcript | ENST00000393959.6 | protein_coding | 4/9 | chr5 | TogoVar | |||||||
GABRB2_chr5_161283436_161551725 | 161418868 | T | TATAATCC others(12): Show |
intron_variant | MODIFIER | HG02258.hp2 | a0001 | a0001c0001 | a0001c0001t0033 | a0001c0001t0033g0025 | 1 | 264 | 0.0038 | 19 | c.459 others(36): Show |
GABRB2 | ENSG00000145864.14 | transcript | ENST00000393959.6 | protein_coding | 4/9 | chr5 | TogoVar | |||||||
GABRB2_chr5_161283436_161551725 | 161429357 | A | AAAAAAAA others(12): Show |
intron_variant | MODIFIER | NA18906.hp1 | a0001 | a0001c0001 | a0001c0001t0053 | a0001c0001t0053g0219 | 1 | 254 | 0.0039 | 19 | c.459 others(38): Show |
GABRB2 | ENSG00000145864.14 | transcript | ENST00000393959.6 | protein_coding | 4/9 | chr5 | TogoVar | |||||||
GABRB3_chr15_26538552_26778066 | 26554099 | A | AGTATGTG others(12): Show |
intron_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00323.hp2 others(92): Show |
a0001 | a0001c0001a0001c0003a0001c0004 | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(16): Show | a0001c0001t0002g0001 a0001c0001t0002g0004 a0001c0001t0002g0007 others(92): Show |
95 | 202 | 0.4703 | 19 | c.108 others(38): Show |
GABRB3 | ENSG00000166206.16 | transcript | ENST00000311550.10 | protein_coding | 8/8 | chr15 | TogoVar | |||||||
GABRB3_chr15_26538552_26778066 | 26635010 | A | ATATATAT others(12): Show |
intron_variant | MODIFIER | HG01516.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0060 | 1 | 33 | 0.0303 | 19 | c.241 others(38): Show |
GABRB3 | ENSG00000166206.16 | transcript | ENST00000311550.10 | protein_coding | 3/8 | chr15 | TogoVar | |||||||
GABRG2_chr5_162062773_162160526 | 162078398 | T | TATATATA others(12): Show |
intron_variant | MODIFIER | HG03540.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0022 | 1 | 316 | 0.0032 | 19 | c.107 others(38): Show |
GABRG2 | ENSG00000113327.17 | transcript | ENST00000639213.2 | protein_coding | 1/9 | chr5 | TogoVar | |||||||
GABRG3_chr15_26966181_27546984 | 26968296 | C | CTTTTTTT others(12): Show |
upstream_gene_variant | MODIFIER | NA19240.hp1 | a0001 | a0001c0003 | a0001c0003t0009 | a0001c0003t0009g0059 | 1 | 8 | 0.1250 | 19 | c.-32 others(30): Show |
GABRG3 | ENSG00000182256.13 | transcript | ENST00000615808.5 | protein_coding | 2884 | chr15 | TogoVar | |||||||
GABRG3_chr15_26966181_27546984 | 27062434 | T | TAAAAAAA others(12): Show |
intron_variant | MODIFIER | HG01261.hp2 HG03017.hp1 HG03540.hp1 others(2): Show |
a0001a0002 | a0001c0001a0002c0015 | a0001c0001t0001a0001c0001t0015a0001c0001t0034others(1): Show | a0001c0001t0001g0033 a0001c0001t0001g0086 a0001c0001t0015g0013 others(2): Show |
5 | 35 | 0.1429 | 19 | c.270 others(38): Show |
GABRG3 | ENSG00000182256.13 | transcript | ENST00000615808.5 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GABRG3_chr15_26966181_27546984 | 27145606 | T | TATCTATC others(12): Show |
intron_variant | MODIFIER | HG01109.hp1 HG02145.hp1 HG03516.hp2 |
a0001 | a0001c0002a0001c0003a0001c0017 | a0001c0002t0001a0001c0003t0019a0001c0017t0001 | a0001c0002t0001g0029 a0001c0003t0019g0064 a0001c0017t0001g0039 |
3 | 86 | 0.0349 | 19 | c.270 others(40): Show |
GABRG3 | ENSG00000182256.13 | transcript | ENST00000615808.5 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GABRG3_chr15_26966181_27546984 | 27145610 | T | TATCTATC others(12): Show |
intron_variant | MODIFIER | HG03098.hp2 | a0001 | a0001c0009 | a0001c0009t0002 | a0001c0009t0002g0089 | 1 | 88 | 0.0114 | 19 | c.270 others(40): Show |
GABRG3 | ENSG00000182256.13 | transcript | ENST00000615808.5 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GABRG3_chr15_26966181_27546984 | 27145614 | T | TATCTATC others(12): Show |
intron_variant | MODIFIER | HG03704.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0083 | 1 | 91 | 0.0110 | 19 | c.270 others(40): Show |
GABRG3 | ENSG00000182256.13 | transcript | ENST00000615808.5 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GABRG3_chr15_26966181_27546984 | 27336234 | G | GAGAGAGA others(12): Show |
intron_variant | MODIFIER | HG03195.hp2 | a0001 | a0001c0006 | a0001c0006t0003 | a0001c0006t0003g0069 | 1 | 73 | 0.0137 | 19 | c.574 others(36): Show |
GABRG3 | ENSG00000182256.13 | transcript | ENST00000615808.5 | protein_coding | 5/9 | chr15 | TogoVar | |||||||
GABRG3_chr15_26966181_27546984 | 27518195 | C | CAAAAAAA others(12): Show |
intron_variant | MODIFIER | HG01109.hp2 HG03453.hp2 NA18522.hp1 others(1): Show |
a0001 | a0001c0005a0001c0008a0001c0009 | a0001c0005t0002a0001c0008t0008a0001c0009t0010 | a0001c0005t0002g0055 a0001c0005t0002g0067 a0001c0008t0008g0002 others(1): Show |
4 | 32 | 0.1250 | 19 | c.713 others(36): Show |
GABRG3 | ENSG00000182256.13 | transcript | ENST00000615808.5 | protein_coding | 6/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GABRR2_chr6_89249464_89320299 | 89280211 | A | ATATATAT others(12): Show |
intron_variant | MODIFIER | HG04204.hp1 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0035 | 1 | 101 | 0.0099 | 19 | c.221 others(36): Show |
GABRR2 | ENSG00000111886.11 | transcript | ENST00000402938.4 | protein_coding | 2/8 | chr6 | TogoVar | |||||||
GADL1_chr3_30721197_30899661 | 30805734 | C | CTTTTTTT others(12): Show |
intron_variant | MODIFIER | HG02976.hp1 HG03491.hp2 NA18747.hp2 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(3): Show | a0001c0001t0001g0091 a0001c0001t0001g0245 a0001c0001t0001g0253 others(10): Show |
13 | 80 | 0.1625 | 19 | c.105 others(38): Show |
GADL1 | ENSG00000144644.15 | transcript | ENST00000282538.10 | protein_coding | 11/14 | chr3 | TogoVar | |||||||
GADL1_chr3_30721197_30899661 | 30839514 | C | CAAAAAAA others(12): Show |
intron_variant | MODIFIER | HG03471.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0118 | 1 | 76 | 0.0132 | 19 | c.787 others(34): Show |
GADL1 | ENSG00000144644.15 | transcript | ENST00000282538.10 | protein_coding | 8/14 | chr3 | TogoVar | |||||||
GAGE10_chrX_49298646_49324841 | 49318575 | T | TTTATTTA others(12): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(102): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(36): Show |
105 | 291 | 0.3608 | 19 | c.329 others(36): Show |
GAGE10 | ENSG00000215274.6 | transcript | ENST00000407599.4 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
GAGE12J_chrX_49317037_49334384 | 49318575 | T | TTTATTTA others(12): Show |
upstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(84): Show |
a0001a0005a0006others(4): Show | a0001c0001a0005c0006a0006c0005others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(6): Show | a0001c0001t0001g0002 a0001c0001t0001g0049 a0001c0001t0002g0002 others(37): Show |
87 | 183 | 0.4754 | 19 | c.-35 others(30): Show |
GAGE12J | ENSG00000224659.3 | transcript | ENST00000442437.3 | protein_coding | 3461 | chrX | TogoVar | |||||||
GAK_chr4_844277_937316 | 902596 | C | CAAAAAAA others(12): Show |
intron_variant | MODIFIER | HG02451.hp1 HG02451.hp2 HG02723.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0002 | a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0281 others(1): Show |
4 | 187 | 0.0214 | 19 | c.525 others(36): Show |
GAK | ENSG00000178950.18 | transcript | ENST00000314167.9 | protein_coding | 5/27 | chr4 | TogoVar | |||||||
GAL3ST4_chr7_100154244_100173617 | 100172465 | A | ATTTTTTT others(12): Show |
upstream_gene_variant | MODIFIER | HG01934.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0011 | 1 | 390 | 0.0026 | 19 | c.-41 others(30): Show |
GAL3ST4 | ENSG00000197093.11 | transcript | ENST00000360039.9 | protein_coding | 3849 | chr7 | TogoVar | |||||||
GALC_chr14_87928014_87998182 | 87936921 | T | TATATATA others(12): Show |
intron_variant | MODIFIER | HG01943.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0168 | 1 | 366 | 0.0027 | 19 | c.191 others(38): Show |
GALC | ENSG00000054983.17 | transcript | ENST00000261304.7 | protein_coding | 16/16 | chr14 | TogoVar | |||||||
GALC_chr14_87928014_87998182 | 87956564 | T | TATATATA others(12): Show |
intron_variant | MODIFIER | HG02622.hp1 | a0001 | a0001c0006 | a0001c0006t0001 | a0001c0006t0001g0268 | 1 | 367 | 0.0027 | 19 | c.116 others(38): Show |
GALC | ENSG00000054983.17 | transcript | ENST00000261304.7 | protein_coding | 10/16 | chr14 | TogoVar | |||||||
GALC_chr14_87928014_87998182 | 87956587 | T | TATATATA others(12): Show |
intron_variant | MODIFIER | HG01884.hp2 | a0001 | a0001c0006 | a0001c0006t0001 | a0001c0006t0001g0138 | 1 | 368 | 0.0027 | 19 | c.116 others(38): Show |
GALC | ENSG00000054983.17 | transcript | ENST00000261304.7 | protein_coding | 10/16 | chr14 | TogoVar | |||||||
GALC_chr14_87928014_87998182 | 87956597 | C | CACACACA others(12): Show |
intron_variant | MODIFIER | HG00738.hp1 HG01081.hp2 HG02486.hp2 others(12): Show |
a0001a0003 | a0001c0001a0001c0006a0001c0029others(1): Show | a0001c0001t0001a0001c0006t0001a0001c0006t0011others(2): Show | a0001c0001t0001g0309 a0001c0006t0001g0026 a0001c0006t0001g0224 others(9): Show |
15 | 198 | 0.0758 | 19 | c.116 others(38): Show |
GALC | ENSG00000054983.17 | transcript | ENST00000261304.7 | protein_coding | 10/16 | chr14 | TogoVar | |||||||
GALK2_chr15_49165247_49336882 | 49228687 | A | ATATATAT others(12): Show |
intron_variant | MODIFIER | NA18972.hp1 | a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0177 | 1 | 136 | 0.0074 | 19 | c.267 others(36): Show |
GALK2 | ENSG00000156958.15 | transcript | ENST00000560031.6 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GALK2_chr15_49165247_49336882 | 49228687 | A | ATATATAT others(12): Show |
intron_variant | MODIFIER | HG02572.hp1 | a0001 | a0001c0001 | a0001c0001t0008 | a0001c0001t0008g0034 | 1 | 136 | 0.0074 | 19 | c.267 others(36): Show |
GALK2 | ENSG00000156958.15 | transcript | ENST00000560031.6 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GALK2_chr15_49165247_49336882 | 49228688 | T | TATATATA others(12): Show |
intron_variant | MODIFIER | HG02145.hp1 | a0001 | a0001c0002 | a0001c0002t0039 | a0001c0002t0039g0207 | 1 | 295 | 0.0034 | 19 | c.267 others(36): Show |
GALK2 | ENSG00000156958.15 | transcript | ENST00000560031.6 | protein_coding | 3/9 | chr15 | TogoVar | |||||||
GALK2_chr15_49165247_49336882 | 49299735 | T | TTTCTTTC others(12): Show |
intron_variant | MODIFIER | HG00099.hp1 HG01099.hp2 HG01358.hp2 others(6): Show |
a0001 | a0001c0002 | a0001c0002t0003a0001c0002t0004a0001c0002t0024others(1): Show | a0001c0002t0003g0145 a0001c0002t0003g0154 a0001c0002t0003g0159 others(6): Show |
9 | 238 | 0.0378 | 19 | c.967 others(36): Show |
GALK2 | ENSG00000156958.15 | transcript | ENST00000560031.6 | protein_coding | 8/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GALM_chr2_38661114_38739765 | 38703092 | A | ATATATAT others(12): Show |
intron_variant | MODIFIER | HG03239.hp1 HG03831.hp2 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0103 a0002c0002t0001g0292 |
2 | 248 | 0.0081 | 19 | c.634 others(38): Show |
GALM | ENSG00000143891.17 | transcript | ENST00000272252.10 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
GALNT10_chr5_154185733_154425984 | 154293611 | A | ATTTTTTT others(12): Show |
intron_variant | MODIFIER | HG00639.hp1 HG00741.hp1 HG02559.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0029 | a0001c0001t0001g0051 a0001c0001t0003g0071 a0001c0001t0003g0146 others(1): Show |
4 | 225 | 0.0178 | 19 | c.160 others(36): Show |
GALNT10 | ENSG00000164574.16 | transcript | ENST00000297107.11 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
GALNT10_chr5_154185733_154425984 | 154293613 | A | ATTTTTTT others(12): Show |
intron_variant | MODIFIER | HG01069.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0013 | 1 | 210 | 0.0048 | 19 | c.160 others(36): Show |
GALNT10 | ENSG00000164574.16 | transcript | ENST00000297107.11 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
GALNT11_chr7_152020674_152127340 | 152025694 | A | ACTGGGCG others(12): Show |
5_prime_UTR_variant | MODIFIER | HG00544.hp1 HG02071.hp2 NA18989.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0007a0001c0001t0016 | a0001c0001t0007g0124 a0001c0001t0007g0125 a0001c0001t0007g0132 others(1): Show |
4 | 282 | 0.0142 | 19 | c.-22 others(28): Show |
GALNT11 | ENSG00000178234.13 | transcript | ENST00000430044.7 | protein_coding | 1/12 | 68511 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
GALNT12_chr9_98802670_98855081 | 98821624 | C | CAAAAAAA others(12): Show |
intron_variant | MODIFIER | HG00544.hp1 NA19067.hp2 |
a0001a0002 | a0001c0002a0002c0003 | a0001c0002t0002a0002c0003t0001 | a0001c0002t0002g0154 a0002c0003t0001g0250 |
2 | 82 | 0.0244 | 19 | c.372 others(36): Show |
GALNT12 | ENSG00000119514.7 | transcript | ENST00000375011.4 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
GALNT13_chr2_153866922_154458979 | 154177311 | A | ATATATAG others(12): Show |
intron_variant | MODIFIER | HG02559.hp1 HG02615.hp2 HG03098.hp1 others(2): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0011a0001c0001t0033a0002c0002t0038 | a0001c0001t0011g0093 a0001c0001t0011g0095 a0001c0001t0011g0111 others(2): Show |
5 | 212 | 0.0236 | 19 | c.311 others(38): Show |
GALNT13 | ENSG00000144278.15 | transcript | ENST00000392825.8 | protein_coding | 4/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
GALNT13_chr2_153866922_154458979 | 154225160 | T | TGACAGAT others(12): Show |
intron_variant | MODIFIER | HG03710.hp1 | a0001 | a0001c0001 | a0001c0001t0018 | a0001c0001t0018g0165 | 1 | 18 | 0.0556 | 19 | c.312 others(38): Show |
GALNT13 | ENSG00000144278.15 | transcript | ENST00000392825.8 | protein_coding | 4/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
GALNT14_chr2_30905467_31143440 | 31038085 | T | TATATATA others(12): Show |
intron_variant | MODIFIER | HG02895.hp2 HG03139.hp1 NA19088.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0073 a0001c0001t0001g0087 a0001c0001t0001g0174 |
3 | 182 | 0.0165 | 19 | c.130 others(38): Show |
GALNT14 | ENSG00000158089.15 | transcript | ENST00000349752.10 | protein_coding | 1/14 | chr2 | TogoVar | |||||||
GALNT15_chr3_16169680_16235165 | 16232518 | A | ATATATAT others(12): Show |
downstream_gene_variant | MODIFIER | HG01243.hp2 | a0003 | a0003c0004 | a0003c0004t0002 | a0003c0004t0002g0163 | 1 | 380 | 0.0026 | 19 | c.*50 others(30): Show |
GALNT15 | ENSG00000131386.20 | transcript | ENST00000339732.10 | protein_coding | 2354 | chr3 | TogoVar | |||||||
GALNT15_chr3_16169680_16235165 | 16233094 | C | CTTTTTTT others(12): Show |
downstream_gene_variant | MODIFIER | HG03130.hp2 HG03579.hp2 HG04184.hp2 |
a0001a0002 | a0001c0002a0002c0010 | a0001c0002t0007a0002c0010t0011 | a0001c0002t0007g0028 a0002c0010t0011g0062 a0002c0010t0011g0314 |
3 | 107 | 0.0280 | 19 | c.*55 others(30): Show |
GALNT15 | ENSG00000131386.20 | transcript | ENST00000339732.10 | protein_coding | 2930 | chr3 | TogoVar | |||||||
GALNT16_chr14_69255158_69359466 | 69264819 | C | CTTTTTTT others(12): Show |
intron_variant | MODIFIER | HG00408.hp1 HG01175.hp2 HG01243.hp1 others(23): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0002c0002others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0041 a0001c0001t0001g0218 a0001c0001t0001g0219 others(23): Show |
26 | 49 | 0.5306 | 19 | c.177 others(36): Show |
GALNT16 | ENSG00000100626.17 | transcript | ENST00000448469.8 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
GALNT16_chr14_69255158_69359466 | 69356554 | C | CTTTTTTT others(12): Show |
downstream_gene_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG01081.hp1 others(1): Show |
a0001a0002 | a0001c0001a0002c0002a0002c0011 | a0001c0001t0002a0002c0002t0002a0002c0011t0002 | a0001c0001t0002g0179 a0001c0001t0002g0240 a0002c0002t0002g0253 others(1): Show |
4 | 124 | 0.0323 | 19 | c.*43 others(30): Show |
GALNT16 | ENSG00000100626.17 | transcript | ENST00000448469.8 | protein_coding | 2089 | chr14 | TogoVar |