Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
AKAP14_chrX_119890893_119925716	119893990	C C	CAA CAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp1 HG01346.hp1 HG01517.hp1 others(5): Show HG00642.hp1 HG01346.hp1 HG01517.hp1 HG01981.hp1 HG02071.hp1 HG03831.hp2 NA19079.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0016 a0001c0001t0001g0262 others(5): Show a0001c0001t0001g0005 a0001c0001t0001g0016 a0001c0001t0001g0262 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0273 a0001c0001t0001g0278 a0001c0001t0001g0279	8	304	0.0263	2	c.-21 others(13): Show c.-2121_-2120insAA	AKAP14	ENSG00000186471.13	transcript	ENST00000371431.8	protein_coding		1902		chrX	TogoVar
AKAP14_chrX_119890893_119925716	119896427	A A	AGC AGC	intron_variant intron_variant	MODIFIER	NA18985.hp1 NA18985.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0188 a0001c0001t0005g0188	1	304	0.0033	2	c.-11 others(17): Show c.-11+161_-11+162insCG	AKAP14	ENSG00000186471.13	transcript	ENST00000371431.8	protein_coding	2/6		INFO_REALIGN_3_PRIME	chrX	TogoVar
AKAP14_chrX_119890893_119925716	119896464	A A	AGG AGG	intron_variant intron_variant	MODIFIER	NA19012.hp1 NA19012.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0186 a0001c0001t0001g0186	1	304	0.0033	2	c.-11 others(17): Show c.-11+200_-11+201dupGG	AKAP14	ENSG00000186471.13	transcript	ENST00000371431.8	protein_coding	2/6		INFO_REALIGN_3_PRIME	chrX	TogoVar
AKAP14_chrX_119890893_119925716	119901705	C C	CAA CAA	intron_variant intron_variant	MODIFIER	NA18987.hp2 NA18987.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0240 a0001c0001t0001g0240	1	304	0.0033	2	c.-10 others(19): Show c.-10-1496_-10-1495dupAA	AKAP14	ENSG00000186471.13	transcript	ENST00000371431.8	protein_coding	2/6		INFO_REALIGN_3_PRIME	chrX	TogoVar
AKAP14_chrX_119890893_119925716	119901832	A A	AAG AAG	intron_variant intron_variant	MODIFIER	NA18987.hp2 NA18987.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0240 a0001c0001t0001g0240	1	304	0.0033	2	c.-10 others(19): Show c.-10-1381_-10-1380insGA	AKAP14	ENSG00000186471.13	transcript	ENST00000371431.8	protein_coding	2/6		INFO_REALIGN_3_PRIME	chrX	TogoVar
AKAP14_chrX_119890893_119925716	119901871	T T	TGG TGG	intron_variant intron_variant	MODIFIER	NA18987.hp2 NA18987.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0240 a0001c0001t0001g0240	1	304	0.0033	2	c.-10 others(19): Show c.-10-1342_-10-1341dupGG	AKAP14	ENSG00000186471.13	transcript	ENST00000371431.8	protein_coding	2/6		INFO_REALIGN_3_PRIME	chrX	TogoVar
AKAP14_chrX_119890893_119925716	119902064	C C	CTT CTT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00423.hp2 HG00558.hp2 others(72): Show HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00639.hp2 HG00738.hp1 HG01109.hp1 HG01243.hp1 HG01884.hp1 HG01928.hp1 HG01978.hp2 HG02004.hp2 HG02015.hp1 HG02109.hp1 HG02145.hp1 HG02155.hp2 HG02451.hp1 HG02572.hp1 HG02615.hp1 HG02622.hp1 HG02723.hp1 HG02735.hp1 HG02818.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp2 HG03041.hp2 HG03195.hp2 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03540.hp2 HG03688.hp1 HG03831.hp1 HG03927.hp1 NA18906.hp2 NA18940.hp1 NA18945.hp1 NA18947.hp1 NA18949.hp2 NA18950.hp1 NA18951.hp2 NA18955.hp1 NA18959.hp1 NA18963.hp2 NA18964.hp1 NA18966.hp1 NA18972.hp1 NA18974.hp1 NA18975.hp2 NA18977.hp1 NA18980.hp2 NA18981.hp1 NA18992.hp2 NA18993.hp2 NA18998.hp2 NA19009.hp1 NA19011.hp2 NA19030.hp1 NA19058.hp1 NA19060.hp1 NA19063.hp1 NA19065.hp2 NA19067.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA20129.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0009 a0001c0001t0001g0010 others(66): Show a0001c0001t0001g0003 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0105 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0171 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0243 a0001c0001t0001g0247 a0001c0001t0001g0261 a0001c0001t0001g0262	75	304	0.2467	2	c.-10 others(19): Show c.-10-1136_-10-1135dupTT	AKAP14	ENSG00000186471.13	transcript	ENST00000371431.8	protein_coding	2/6		INFO_REALIGN_3_PRIME	chrX	TogoVar
AKAP14_chrX_119890893_119925716	119904884	C C	CAA CAA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02109.hp2 HG02257.hp1 others(4): Show HG01884.hp2 HG02109.hp2 HG02257.hp1 HG02559.hp2 HG02622.hp2 HG02809.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0012 a0001c0001t0001g0159 a0001c0001t0001g0182 others(3): Show a0001c0001t0001g0012 a0001c0001t0001g0159 a0001c0001t0001g0182 a0001c0001t0001g0185 a0001c0001t0002g0181 a0001c0001t0002g0183	7	304	0.0230	2	c.261 others(19): Show c.261+1303_261+1304dupAA	AKAP14	ENSG00000186471.13	transcript	ENST00000371431.8	protein_coding	4/6		INFO_REALIGN_3_PRIME	chrX	TogoVar
AKAP14_chrX_119890893_119925716	119905050	C C	CAA CAA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02109.hp2 HG02257.hp1 others(10): Show HG01884.hp2 HG02109.hp2 HG02257.hp1 HG02559.hp2 HG02622.hp2 HG02647.hp1 HG02809.hp1 HG03471.hp1 HG03579.hp1 HG06807.hp2 NA19240.hp1 NA20129.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0158 others(8): Show a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0182 a0001c0001t0001g0185 a0001c0001t0001g0205 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0002g0181 a0001c0001t0002g0183	13	304	0.0428	2	c.261 others(19): Show c.261+1475_261+1476dupAA	AKAP14	ENSG00000186471.13	transcript	ENST00000371431.8	protein_coding	4/6		INFO_REALIGN_3_PRIME	chrX	TogoVar
AKAP14_chrX_119890893_119925716	119906225	C C	CTT CTT	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01243.hp1 HG02109.hp1 others(13): Show HG01099.hp1 HG01243.hp1 HG02109.hp1 HG02280.hp2 HG02572.hp1 HG02622.hp1 HG02647.hp1 HG02723.hp1 HG02965.hp1 HG03453.hp1 HG03516.hp2 HG03669.hp1 HG04204.hp1 HG06807.hp2 NA18906.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0015 a0001c0001t0001g0072 a0001c0001t0001g0140 others(12): Show a0001c0001t0001g0015 a0001c0001t0001g0072 a0001c0001t0001g0140 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0191 a0001c0001t0001g0202 a0001c0001t0001g0210 a0001c0001t0001g0214 a0001c0001t0001g0223 a0001c0001t0001g0227 a0001c0001t0001g0259 a0001c0001t0002g0184	16	304	0.0526	2	c.261 others(19): Show c.261+2665_261+2666dupTT	AKAP14	ENSG00000186471.13	transcript	ENST00000371431.8	protein_coding	4/6		INFO_REALIGN_3_PRIME	chrX	TogoVar
AKAP14_chrX_119890893_119925716	119906677	G G	GCA GCA	intron_variant intron_variant	MODIFIER	NA18972.hp1 NA18972.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0134 a0001c0001t0001g0134	1	304	0.0033	2	c.261 others(19): Show c.261+3093_261+3094dupAC	AKAP14	ENSG00000186471.13	transcript	ENST00000371431.8	protein_coding	4/6		INFO_REALIGN_3_PRIME	chrX	TogoVar
AKAP14_chrX_119890893_119925716	119907129	A A	ATT ATT	intron_variant intron_variant	MODIFIER	NA18972.hp1 NA18975.hp1 NA18972.hp1 NA18975.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0134 a0001c0001t0001g0255 a0001c0001t0001g0134 a0001c0001t0001g0255	2	304	0.0066	2	c.261 others(19): Show c.261+3558_261+3559dupTT	AKAP14	ENSG00000186471.13	transcript	ENST00000371431.8	protein_coding	4/6		INFO_REALIGN_3_PRIME	chrX	TogoVar
AKAP14_chrX_119890893_119925716	119908284	C C	CAA CAA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00558.hp1 HG01168.hp1 others(28): Show HG00140.hp1 HG00558.hp1 HG01168.hp1 HG01169.hp2 HG01884.hp2 HG02280.hp2 HG02809.hp1 HG03041.hp1 HG03453.hp1 HG03710.hp1 HG03834.hp1 HG04184.hp1 HG06807.hp1 NA18612.hp1 NA18946.hp2 NA18947.hp2 NA18951.hp1 NA18970.hp1 NA18972.hp2 NA18975.hp1 NA18977.hp1 NA18981.hp1 NA18983.hp1 NA18985.hp1 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19062.hp1 NA19068.hp1 NA19074.hp2 NA19083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0001 a0001c0001t0002 a0001c0001t0005	a0001c0001t0001g0025 a0001c0001t0001g0030 a0001c0001t0001g0069 others(28): Show a0001c0001t0001g0025 a0001c0001t0001g0030 a0001c0001t0001g0069 a0001c0001t0001g0115 a0001c0001t0001g0154 a0001c0001t0001g0156 a0001c0001t0001g0214 a0001c0001t0001g0218 a0001c0001t0001g0220 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0002g0160 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0005g0188	31	304	0.1020	2	c.261 others(19): Show c.261+4715_261+4716dupAA	AKAP14	ENSG00000186471.13	transcript	ENST00000371431.8	protein_coding	4/6		INFO_REALIGN_3_PRIME	chrX	TogoVar
AKAP14_chrX_119890893_119925716	119914237	C C	CAA CAA	intron_variant intron_variant	MODIFIER	NA19000.hp1 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0173 a0001c0001t0001g0173	1	304	0.0033	2	c.262 others(17): Show c.262-446_262-445dupAA	AKAP14	ENSG00000186471.13	transcript	ENST00000371431.8	protein_coding	4/6		INFO_REALIGN_3_PRIME	chrX	TogoVar
AKAP14_chrX_119890893_119925716	119916653	C C	CTT CTT	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG03486.hp1 HG02280.hp2 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0201 a0001c0001t0001g0214 a0001c0001t0001g0201 a0001c0001t0001g0214	2	304	0.0066	2	c.441 others(19): Show c.441+1794_441+1795dupTT	AKAP14	ENSG00000186471.13	transcript	ENST00000371431.8	protein_coding	5/6		INFO_REALIGN_3_PRIME	chrX	TogoVar
AKAP14_chrX_119890893_119925716	119922348	T T	TAG TAG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18967.hp1 NA18967.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0282 a0001c0001t0001g0282	1	304	0.0033	2	c.17 others(13): Show c.1741_*1742insAG	AKAP14	ENSG00000186471.13	transcript	ENST00000371431.8	protein_coding		1633		chrX	TogoVar
AKAP14_chrX_119890893_119925716	119922362	G G	GTT GTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19074.hp2 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0220 a0001c0001t0001g0220	1	304	0.0033	2	c.17 others(13): Show c.1755_*1756insTT	AKAP14	ENSG00000186471.13	transcript	ENST00000371431.8	protein_coding		1647		chrX	TogoVar
AKAP14_chrX_119890893_119925716	119922399	T T	TTC TTC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18967.hp1 NA18967.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0282 a0001c0001t0001g0282	1	304	0.0033	2	c.17 others(13): Show c.1792_*1793insTC	AKAP14	ENSG00000186471.13	transcript	ENST00000371431.8	protein_coding		1684		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1586853	T T	TTC TTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	151	0.0066	2	c.-49 others(13): Show c.-4936_-4935insTC	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		4750		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1587031	A A	AAT AAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	151	0.0066	2	c.-47 others(13): Show c.-4758_-4757insAT	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		4572		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1587047	C C	CAT CAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	151	0.0066	2	c.-47 others(13): Show c.-4742_-4741insAT	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		4556		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1587310	C C	CAG CAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	151	0.0066	2	c.-44 others(13): Show c.-4479_-4478insAG	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		4293		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1587487	G G	GCA GCA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	151	0.0066	2	c.-43 others(13): Show c.-4302_-4301insCA	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		4116		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1587513	T T	TGA TGA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18940.hp1 NA18940.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0092 a0001c0001t0001g0092	1	151	0.0066	2	c.-42 others(13): Show c.-4276_-4275insGA	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		4090		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1587519	C C	CCA CCA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18951.hp1 NA18951.hp1	a0012 a0012	a0012c0017 a0012c0017	a0012c0017t0002 a0012c0017t0002	a0012c0017t0002g0031 a0012c0017t0002g0031	1	151	0.0066	2	c.-42 others(13): Show c.-4270_-4269insCA	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		4084		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1587529	T T	TAG TAG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18951.hp1 NA18951.hp1	a0012 a0012	a0012c0017 a0012c0017	a0012c0017t0002 a0012c0017t0002	a0012c0017t0002g0031 a0012c0017t0002g0031	1	151	0.0066	2	c.-42 others(13): Show c.-4260_-4259insAG	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		4074		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1587529	T T	TGA TGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	151	0.0066	2	c.-42 others(13): Show c.-4260_-4259insGA	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		4074		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1587586	T T	TCG TCG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	151	0.0066	2	c.-42 others(13): Show c.-4203_-4202insCG	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		4017		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1587589	C C	CGG CGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	151	0.0066	2	c.-42 others(13): Show c.-4200_-4199insGG	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		4014		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1587659	T T	TCC TCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02004.hp2 HG02004.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0001 a0002c0002t0002g0001	1	151	0.0066	2	c.-41 others(13): Show c.-4130_-4129insCC	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3944		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1587674	T T	TTC TTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02293.hp1 HG02293.hp1	a0016 a0016	a0016c0026 a0016c0026	a0016c0026t0020 a0016c0026t0020	a0016c0026t0020g0114 a0016c0026t0020g0114	1	151	0.0066	2	c.-41 others(13): Show c.-4115_-4114insTC	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3929		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1587683	T T	TCC TCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01257.hp2 HG01257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	151	0.0066	2	c.-41 others(13): Show c.-4106_-4105insCC	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3920		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1587796	T T	TCA TCA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	151	0.0066	2	c.-39 others(13): Show c.-3993_-3992insCA	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3807		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1587827	C C	CCT CCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01884.hp2 HG01891.hp2 HG02559.hp2 others(4): Show HG01884.hp2 HG01891.hp2 HG02559.hp2 HG02970.hp2 HG03139.hp1 HG03540.hp2 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0002c0003t0002 others(3): Show a0001c0001t0001 a0002c0003t0001 a0002c0003t0002 a0002c0003t0003 a0002c0003t0004 a0002c0003t0021	a0001c0001t0001g0041 a0002c0003t0001g0121 a0002c0003t0002g0125 others(4): Show a0001c0001t0001g0041 a0002c0003t0001g0121 a0002c0003t0002g0125 a0002c0003t0002g0127 a0002c0003t0003g0122 a0002c0003t0004g0046 a0002c0003t0021g0017	7	151	0.0464	2	c.-39 others(13): Show c.-3962_-3961insCT	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3776		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1587827	C C	CTT CTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0054 a0002c0003t0002g0054	1	151	0.0066	2	c.-39 others(13): Show c.-3962_-3961insTT	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3776		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1587847	T T	TCC TCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0004 a0004	a0004c0007 a0004c0007	a0004c0007t0001 a0004c0007t0001	a0004c0007t0001g0002 a0004c0007t0001g0002	1	151	0.0066	2	c.-39 others(13): Show c.-3942_-3941insCC	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3756		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1587864	T T	TCC TCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0036 a0002c0002t0002g0036	1	151	0.0066	2	c.-39 others(13): Show c.-3925_-3924insCC	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3739		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1587894	T T	TTC TTC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18940.hp1 NA18940.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0092 a0001c0001t0001g0092	1	151	0.0066	2	c.-38 others(13): Show c.-3895_-3894insTC	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3709		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1588051	C C	CGT CGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	151	0.0066	2	c.-37 others(13): Show c.-3738_-3737insGT	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3552		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1588054	C C	CCT CCT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18940.hp1 NA18940.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0092 a0001c0001t0001g0092	1	151	0.0066	2	c.-37 others(13): Show c.-3735_-3734insCT	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3549		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1588114	C C	CCT CCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	151	0.0066	2	c.-36 others(13): Show c.-3675_-3674insCT	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3489		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1588141	C C	CTT CTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	151	0.0066	2	c.-36 others(13): Show c.-3648_-3647insTT	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3462		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1588230	C C	CCT CCT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18940.hp1 NA18940.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0092 a0001c0001t0001g0092	1	151	0.0066	2	c.-35 others(13): Show c.-3559_-3558insCT	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3373		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1588230	C C	CTT CTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	151	0.0066	2	c.-35 others(13): Show c.-3559_-3558insTT	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3373		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1588253	C C	CGA CGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	151	0.0066	2	c.-35 others(13): Show c.-3536_-3535insGA	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3350		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1588258	C C	CCT CCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	151	0.0066	2	c.-35 others(13): Show c.-3531_-3530insCT	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3345		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1588281	T T	TAC TAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	151	0.0066	2	c.-35 others(13): Show c.-3508_-3507insAC	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3322		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1588361	T T	TCC TCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	151	0.0066	2	c.-34 others(13): Show c.-3428_-3427insCC	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3242		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1588386	T T	TCC TCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02004.hp2 HG02004.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0001 a0002c0002t0002g0001	1	151	0.0066	2	c.-34 others(13): Show c.-3403_-3402insCC	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3217		chrX	TogoVar
AKAP17A_chrX_1586604_1607520	1588406	T T	TCC TCC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19062.hp1 NA19062.hp1	a0015 a0015	a0015c0016 a0015c0016	a0015c0016t0019 a0015c0016t0019	a0015c0016t0019g0014 a0015c0016t0019g0014	1	151	0.0066	2	c.-33 others(13): Show c.-3383_-3382insCC	AKAP17A	ENSG00000197976.12	transcript	ENST00000313871.9	protein_coding		3197		chrX	TogoVar

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