Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
TSPY1_chrY_9461955_9474749	9466069	C C	CCT CCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04115.hp2 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	23	0.0435	2	c.-93 others(11): Show c.-932_-931insCT		TSPY1	ENSG00000258992.7	transcript	ENST00000451548.6	protein_coding					885		chrY	TogoVar
TSPY1_chrY_9461955_9474749	9466071	C C	CGG CGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01069.hp2 HG01106.hp2 HG01358.hp2 others(20): Show HG01069.hp2 HG01106.hp2 HG01358.hp2 HG01515.hp1 HG02602.hp1 HG02647.hp2 HG02698.hp1 HG02738.hp1 HG02965.hp2 HG03471.hp1 HG03654.hp1 HG03688.hp2 HG04115.hp2 HG04228.hp1 NA18612.hp2 NA18953.hp1 NA18955.hp1 NA18960.hp2 NA18982.hp1 NA19007.hp2 NA19058.hp1 NA20752.hp2 NA20805.hp2	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008	a0001c0001 a0001c0004 a0001c0008 others(8): Show a0001c0001 a0001c0004 a0001c0008 a0002c0003 a0002c0011 a0003c0002 a0004c0007 a0005c0005 a0006c0009 a0007c0006 a0008c0010	a0001c0001t0001 a0001c0001t0002 a0001c0004t0002 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0004t0002 a0001c0004t0003 a0001c0008t0001 a0002c0003t0001 a0002c0011t0002 a0003c0002t0002 a0004c0007t0001 a0005c0005t0001 a0006c0009t0004 a0007c0006t0005 a0008c0010t0002	a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0012 others(13): Show a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0002g0001 a0001c0004t0002g0006 a0001c0004t0003g0008 a0001c0008t0001g0009 a0002c0003t0001g0001 a0002c0003t0001g0003 a0002c0011t0002g0007 a0003c0002t0002g0002 a0004c0007t0001g0005 a0005c0005t0001g0001 a0006c0009t0004g0004 a0007c0006t0005g0010 a0008c0010t0002g0013	23	23	1.0000	2	c.-93 others(11): Show c.-930_-929insGG		TSPY1	ENSG00000258992.7	transcript	ENST00000451548.6	protein_coding					883		chrY	TogoVar
TSPY1_chrY_9461955_9474749	9468993	C C	CAG CAG	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01106.hp2 HG01358.hp2 others(18): Show HG01069.hp2 HG01106.hp2 HG01358.hp2 HG01515.hp1 HG02602.hp1 HG02647.hp2 HG02698.hp1 HG02738.hp1 HG02965.hp2 HG03471.hp1 HG03654.hp1 HG03688.hp2 HG04115.hp2 HG04228.hp1 NA18612.hp2 NA18953.hp1 NA18955.hp1 NA18960.hp2 NA18982.hp1 NA20752.hp2 NA20805.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007	a0001c0001 a0001c0004 a0001c0008 others(6): Show a0001c0001 a0001c0004 a0001c0008 a0002c0003 a0003c0002 a0004c0007 a0005c0005 a0006c0009 a0007c0006	a0001c0001t0001 a0001c0001t0002 a0001c0004t0002 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0004t0002 a0001c0004t0003 a0001c0008t0001 a0002c0003t0001 a0003c0002t0002 a0004c0007t0001 a0005c0005t0001 a0006c0009t0004 a0007c0006t0005	a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0012 others(11): Show a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0002g0001 a0001c0004t0002g0006 a0001c0004t0003g0008 a0001c0008t0001g0009 a0002c0003t0001g0001 a0002c0003t0001g0003 a0003c0002t0002g0002 a0004c0007t0001g0005 a0005c0005t0001g0001 a0006c0009t0004g0004 a0007c0006t0005g0010	21	23	0.9130	2	c.904 others(17): Show c.904+150_904+151dupAG		TSPY1	ENSG00000258992.7	transcript	ENST00000451548.6	protein_coding	5/5					INFO_REALIGN_3_PRIME	chrY	TogoVar
TSPY1_chrY_9461955_9474749	9469467	G G	GCC GCC	intron_variant intron_variant	MODIFIER	NA18953.hp1 NA18953.hp1	a0006 a0006	a0006c0009 a0006c0009	a0006c0009t0004 a0006c0009t0004	a0006c0009t0004g0004 a0006c0009t0004g0004	1	23	0.0435	2	c.905 others(15): Show c.905-69_905-68dupCC		TSPY1	ENSG00000258992.7	transcript	ENST00000451548.6	protein_coding	5/5					INFO_REALIGN_3_PRIME	chrY	TogoVar
TSPY1_chrY_9461955_9474749	9472930	C C	CAT CAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02738.hp1 HG03654.hp1 HG04115.hp2 HG02738.hp1 HG03654.hp1 HG04115.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0001 a0001c0001t0001g0011 a0002c0003t0001g0001 a0001c0001t0001g0001 a0001c0001t0001g0011 a0002c0003t0001g0001	3	23	0.1304	2	c.33 others(13): Show c.3369_*3370insAT		TSPY1	ENSG00000258992.7	transcript	ENST00000451548.6	protein_coding					3182		chrY	TogoVar
TSPY1_chrY_9461955_9474749	9472973	A A	AAG AAG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18982.hp1 NA18982.hp1	a0007 a0007	a0007c0006 a0007c0006	a0007c0006t0005 a0007c0006t0005	a0007c0006t0005g0010 a0007c0006t0005g0010	1	23	0.0435	2	c.34 others(13): Show c.3412_*3413insAG		TSPY1	ENSG00000258992.7	transcript	ENST00000451548.6	protein_coding					3225		chrY	TogoVar
TSPY2_chrY_6241223_6254018	6245841	C C	CCT CCT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19076.hp1 NA19076.hp1	a0004 a0004	a0004c0003 a0004c0003	a0004c0003t0001 a0004c0003t0001	a0004c0003t0001g0005 a0004c0003t0001g0005	1	108	0.0093	2	c.-42 others(11): Show c.-428_-427insCT		TSPY2	ENSG00000168757.13	transcript	ENST00000320701.9	protein_coding					381		chrY	TogoVar
TSPY2_chrY_6241223_6254018	6249029	C C	CTG CTG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19089.hp1 NA19089.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	108	0.0093	2	c.20 others(11): Show c.204_*205insTG		TSPY2	ENSG00000168757.13	transcript	ENST00000320701.9	protein_coding					12		chrY	TogoVar
TSPY2_chrY_6241223_6254018	6249055	T T	TTG TTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02027.hp1 HG02132.hp1 HG03688.hp2 others(3): Show HG02027.hp1 HG02132.hp1 HG03688.hp2 HG04199.hp1 NA18971.hp1 NA19006.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 a0001c0001t0001 a0001c0001t0002 a0002c0002t0001	a0001c0001t0001g0001 a0001c0001t0002g0003 a0002c0002t0001g0001 a0001c0001t0001g0001 a0001c0001t0002g0003 a0002c0002t0001g0001	6	108	0.0556	2	c.23 others(11): Show c.230_*231insTG		TSPY2	ENSG00000168757.13	transcript	ENST00000320701.9	protein_coding					38		chrY	TogoVar
TSPY2_chrY_6241223_6254018	6252193	C C	CAT CAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01074.hp1 HG01109.hp1 HG02074.hp1 others(8): Show HG01074.hp1 HG01109.hp1 HG02074.hp1 HG02129.hp1 HG02135.hp1 HG02647.hp1 HG02698.hp1 HG03017.hp1 HG03688.hp2 HG04199.hp1 HG04204.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0002c0002t0001 a0001c0001t0001 a0001c0001t0003 a0002c0002t0001	a0001c0001t0001g0001 a0001c0001t0003g0001 a0002c0002t0001g0001 a0001c0001t0001g0001 a0001c0001t0003g0001 a0002c0002t0001g0001	11	108	0.1019	2	c.33 others(13): Show c.3368_*3369insAT		TSPY2	ENSG00000168757.13	transcript	ENST00000320701.9	protein_coding					3176		chrY	TogoVar
TSPY4_chrY_9332464_9345278	9339592	G G	GGT GGT	intron_variant intron_variant	MODIFIER	NA18983.hp1 NA18983.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0002 a0002c0001t0002	a0002c0001t0002g0001 a0002c0001t0002g0001	1	3	0.3333	2	c.922 others(17): Show c.922+220_922+221insTG		TSPY4	ENSG00000233803.9	transcript	ENST00000426950.6	protein_coding	5/5					INFO_REALIGN_3_PRIME	chrY	TogoVar
TSPY4_chrY_9332464_9345278	9340294	C C	CTG CTG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18985.hp1 NA18985.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0003 a0003c0003t0001g0003	1	3	0.3333	2	c.20 others(11): Show c.204_*205insTG		TSPY4	ENSG00000233803.9	transcript	ENST00000426950.6	protein_coding					17		chrY	TogoVar
TSPY4_chrY_9332464_9345278	9340515	G G	GGT GGT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18983.hp1 NA18983.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0002 a0002c0001t0002	a0002c0001t0002g0001 a0002c0001t0002g0001	1	3	0.3333	2	c.42 others(11): Show c.425_*426insGT		TSPY4	ENSG00000233803.9	transcript	ENST00000426950.6	protein_coding					238		chrY	TogoVar
TSPY4_chrY_9332464_9345278	9343463	C C	CAT CAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18983.hp1 NA18983.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0002 a0002c0001t0002	a0002c0001t0002g0001 a0002c0001t0002g0001	1	3	0.3333	2	c.33 others(13): Show c.3373_*3374insAT		TSPY4	ENSG00000233803.9	transcript	ENST00000426950.6	protein_coding					3186		chrY	TogoVar
TSPYL1_chr6_116269858_116284930	116275798	C C	CAA CAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00280.hp1 HG00544.hp2 HG00642.hp2 others(42): Show HG00280.hp1 HG00544.hp2 HG00642.hp2 HG00738.hp1 HG01106.hp1 HG01123.hp1 HG02074.hp1 HG02132.hp1 HG02451.hp1 HG02559.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02683.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp2 HG03516.hp2 HG03927.hp1 HG04115.hp2 HG04184.hp2 HG04228.hp1 NA18961.hp1 NA18964.hp1 NA18971.hp1 NA18978.hp2 NA18990.hp1 NA19030.hp1 NA19043.hp1 NA19068.hp1 NA20300.hp1 NA21309.hp1	a0002 a0003 a0008 a0002 a0003 a0008	a0002c0002 a0002c0004 a0003c0003 others(1): Show a0002c0002 a0002c0004 a0003c0003 a0008c0011	a0002c0002t0039 a0002c0004t0005 a0002c0004t0009 others(7): Show a0002c0002t0039 a0002c0004t0005 a0002c0004t0009 a0002c0004t0016 a0002c0004t0024 a0002c0004t0029 a0003c0003t0013 a0003c0003t0047 a0003c0003t0053 a0008c0011t0034	a0002c0002t0039g0000 a0002c0004t0005g0000 a0002c0004t0009g0000 others(7): Show a0002c0002t0039g0000 a0002c0004t0005g0000 a0002c0004t0009g0000 a0002c0004t0016g0000 a0002c0004t0024g0000 a0002c0004t0029g0000 a0003c0003t0013g0000 a0003c0003t0047g0000 a0003c0003t0053g0000 a0008c0011t0034g0000	45	416	0.1082	2	c.27 others(13): Show c.2717_*2718dupTT		TSPYL1	ENSG00000189241.8	transcript	ENST00000368608.4	protein_coding	1/1				2718		chr6	TogoVar
TSPYL1_chr6_116269858_116284930	116282616	A A	AAT AAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp1 HG02809.hp1 HG03130.hp2 HG02145.hp1 HG02809.hp1 HG03130.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0032 a0003c0003t0058 a0003c0003t0032 a0003c0003t0058	a0003c0003t0032g0000 a0003c0003t0058g0000 a0003c0003t0032g0000 a0003c0003t0058g0000	3	416	0.0072	2	c.-27 others(13): Show c.-2788_-2787dupAT		TSPYL1	ENSG00000189241.8	transcript	ENST00000368608.4	protein_coding					2687		chr6	TogoVar
TSPYL2_chrX_53077367_53093540	53077923	A A	ACG ACG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0024 a0001c0001t0001g0024	1	258	0.0039	2	c.-45 others(13): Show c.-4576_-4575insCG		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding					4443		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53078018	G G	GTC GTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp1 NA19058.hp1 HG00558.hp1 NA19058.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0001 a0001c0001t0001g0003	2	258	0.0078	2	c.-44 others(13): Show c.-4481_-4480insTC		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding					4348		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53078200	T T	TTG TTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	258	0.0039	2	c.-42 others(13): Show c.-4299_-4298insTG		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding					4166		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53078986	C C	CCA CCA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18940.hp1 NA18940.hp1	a0009 a0009	a0009c0007 a0009c0007	a0009c0007t0015 a0009c0007t0015	a0009c0007t0015g0023 a0009c0007t0015g0023	1	258	0.0039	2	c.-35 others(13): Show c.-3513_-3512insCA		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding					3380		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53079433	G G	GGT GGT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18940.hp1 NA18940.hp1	a0009 a0009	a0009c0007 a0009c0007	a0009c0007t0015 a0009c0007t0015	a0009c0007t0015g0023 a0009c0007t0015g0023	1	258	0.0039	2	c.-30 others(13): Show c.-3066_-3065insGT		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding					2933		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53079455	G G	GGT GGT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18940.hp1 NA18940.hp1	a0009 a0009	a0009c0007 a0009c0007	a0009c0007t0015 a0009c0007t0015	a0009c0007t0015g0023 a0009c0007t0015g0023	1	258	0.0039	2	c.-30 others(13): Show c.-3044_-3043insGT		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding					2911		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53079589	C C	CTG CTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00438.hp1 HG00544.hp1 others(90): Show HG00099.hp1 HG00438.hp1 HG00544.hp1 HG00597.hp2 HG00735.hp1 HG00738.hp1 HG01123.hp2 HG01243.hp1 HG01255.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG02015.hp1 HG02109.hp1 HG02135.hp1 HG02145.hp1 HG02257.hp1 HG02258.hp1 HG02280.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03710.hp1 HG04115.hp1 NA18522.hp1 NA18612.hp1 NA18941.hp2 NA18959.hp1 NA18965.hp1 NA18968.hp2 NA18972.hp1 NA18973.hp1 NA18975.hp1 NA18981.hp1 NA18988.hp1 NA18990.hp1 NA18991.hp2 NA18994.hp1 NA19000.hp1 NA19002.hp2 NA19005.hp1 NA19010.hp2 NA19030.hp1 NA19043.hp1 NA19055.hp1 NA19063.hp1 NA19064.hp1 NA19074.hp2 NA19085.hp1 NA19087.hp1 NA19088.hp1 NA19089.hp1 NA19091.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0011 a0014	a0001c0001 a0002c0005 a0004c0004 others(2): Show a0001c0001 a0002c0005 a0004c0004 a0011c0014 a0014c0013	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0011 a0001c0001t0012 a0002c0005t0001 a0004c0004t0001 a0004c0004t0002 a0011c0014t0001 a0014c0013t0014	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0005 others(32): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0013 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0026 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0039 a0001c0001t0001g0042 a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0002g0002 a0001c0001t0002g0005 a0001c0001t0002g0007 a0001c0001t0002g0031 a0001c0001t0003g0002 a0001c0001t0003g0047 a0001c0001t0005g0012 a0001c0001t0011g0002 a0001c0001t0012g0013 a0002c0005t0001g0010 a0002c0005t0001g0015 a0004c0004t0001g0007 a0004c0004t0002g0002 a0011c0014t0001g0025 a0014c0013t0014g0035	93	258	0.3605	2	c.-29 others(13): Show c.-2910_-2909insTG		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding					2777		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53079605	G G	GGT GGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01978.hp1 HG01978.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	258	0.0039	2	c.-28 others(13): Show c.-2894_-2893insGT		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding					2761		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53079771	T T	TAC TAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00544.hp2 NA18747.hp1 NA18962.hp1 HG00544.hp2 NA18747.hp1 NA18962.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0001 a0001c0001t0001g0003	3	258	0.0116	2	c.-27 others(13): Show c.-2728_-2727insAC		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding					2595		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53080255	G G	GAA GAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	258	0.0039	2	c.-22 others(13): Show c.-2244_-2243insAA		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding					2111		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53081339	C C	CGG CGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00438.hp1 HG00544.hp1 others(20): Show HG00099.hp1 HG00438.hp1 HG00544.hp1 HG00597.hp2 HG00738.hp1 HG01255.hp1 HG01517.hp1 HG02015.hp1 HG02109.hp1 HG02970.hp1 HG02976.hp2 HG03130.hp1 HG03139.hp1 HG03209.hp1 HG04115.hp1 NA18968.hp2 NA18972.hp1 NA18988.hp1 NA19005.hp1 NA19055.hp1 NA19064.hp1 NA19074.hp2 NA19088.hp1	a0001 a0002 a0006 others(1): Show a0001 a0002 a0006 a0011	a0001c0001 a0002c0005 a0006c0006 others(1): Show a0001c0001 a0002c0005 a0006c0006 a0011c0014	a0001c0001t0001 a0001c0001t0003 a0002c0005t0001 others(2): Show a0001c0001t0001 a0001c0001t0003 a0002c0005t0001 a0006c0006t0004 a0011c0014t0001	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 others(9): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0020 a0001c0001t0001g0029 a0001c0001t0001g0048 a0001c0001t0003g0002 a0002c0005t0001g0010 a0002c0005t0001g0015 a0006c0006t0004g0002 a0011c0014t0001g0025	23	258	0.0892	2	c.-11 others(13): Show c.-1160_-1159insGG		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding					1027		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53081447	T T	TGG TGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02738.hp1 NA19055.hp1 HG02738.hp1 NA19055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	2	258	0.0078	2	c.-10 others(13): Show c.-1052_-1051insGG		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding					919		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53081697	G G	GGA GGA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18940.hp1 NA18940.hp1	a0009 a0009	a0009c0007 a0009c0007	a0009c0007t0015 a0009c0007t0015	a0009c0007t0015g0023 a0009c0007t0015g0023	1	258	0.0039	2	c.-80 others(11): Show c.-802_-801insGA		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding					669		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53081729	C C	CAG CAG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19009.hp1 NA19009.hp1	a0013 a0013	a0013c0018 a0013c0018	a0013c0018t0007 a0013c0018t0007	a0013c0018t0007g0017 a0013c0018t0007g0017	1	258	0.0039	2	c.-77 others(11): Show c.-770_-769insAG		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding					637		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53081742	G G	GGA GGA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18989.hp1 NA18989.hp1	a0012 a0012	a0012c0011 a0012c0011	a0012c0011t0001 a0012c0011t0001	a0012c0011t0001g0011 a0012c0011t0001g0011	1	258	0.0039	2	c.-75 others(11): Show c.-757_-756insGA		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding					624		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53081933	G G	GGC GGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0001 a0003c0002t0001	a0003c0002t0001g0003 a0003c0002t0001g0003	1	258	0.0039	2	c.-56 others(11): Show c.-566_-565insGC		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding					433		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53082006	G G	GTC GTC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18940.hp1 NA18940.hp1	a0009 a0009	a0009c0007 a0009c0007	a0009c0007t0015 a0009c0007t0015	a0009c0007t0015g0023 a0009c0007t0015g0023	1	258	0.0039	2	c.-49 others(11): Show c.-493_-492insTC		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding					360		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53084490	C C	CCT CCT	intron_variant intron_variant	MODIFIER	NA18940.hp1 NA18940.hp1	a0009 a0009	a0009c0007 a0009c0007	a0009c0007t0015 a0009c0007t0015	a0009c0007t0015g0023 a0009c0007t0015g0023	1	258	0.0039	2	c.808 others(15): Show c.808-55_808-54insCT		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding	1/6						chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53085307	A A	AAT AAT	frameshift_variant frameshift_variant	HIGH	NA19063.hp1 NA19063.hp1	a0014 a0014	a0014c0013 a0014c0013	a0014c0013t0014 a0014c0013t0014	a0014c0013t0014g0035 a0014c0013t0014g0035	1	258	0.0039	2	c.122 others(11): Show c.1224_1225insAT	p.Glu others(5): Show p.Glu409fs	TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding	5/7	1357/2815	1225/2082	409/693			chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53086320	T T	TCC TCC	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00438.hp1 HG00738.hp1 others(79): Show HG00099.hp1 HG00438.hp1 HG00738.hp1 HG01243.hp1 HG01255.hp1 HG01515.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG02015.hp1 HG02135.hp1 HG02257.hp1 HG02280.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp2 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03098.hp1 HG03130.hp1 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03710.hp1 HG04115.hp1 NA18522.hp1 NA18906.hp1 NA18943.hp1 NA18954.hp1 NA18959.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp2 NA18971.hp1 NA18972.hp1 NA18975.hp1 NA18981.hp1 NA18990.hp1 NA18991.hp2 NA18994.hp1 NA19000.hp1 NA19002.hp2 NA19010.hp2 NA19011.hp2 NA19030.hp1 NA19043.hp1 NA19055.hp1 NA19064.hp1 NA19074.hp2 NA19085.hp1 NA19087.hp1 NA19088.hp1 NA19089.hp1 NA19091.hp1 NA20129.hp1 NA20300.hp2 NA20805.hp1	a0001 a0004 a0006 a0001 a0004 a0006	a0001c0001 a0001c0017 a0004c0004 others(1): Show a0001c0001 a0001c0017 a0004c0004 a0006c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0011 a0001c0017t0001 a0004c0004t0001 a0004c0004t0002 a0006c0006t0004	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0006 others(21): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0046 a0001c0001t0002g0002 a0001c0001t0002g0007 a0001c0001t0002g0031 a0001c0001t0002g0050 a0001c0001t0003g0002 a0001c0001t0003g0047 a0001c0001t0011g0002 a0001c0017t0001g0004 a0004c0004t0001g0007 a0004c0004t0002g0002 a0006c0006t0004g0002 a0006c0006t0004g0007	82	258	0.3178	2	c.191 others(17): Show c.1918+17_1918+18dupCC		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding	6/6					INFO_REALIGN_3_PRIME	chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53086581	A A	AAG AAG	intron_variant intron_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0014 a0014	a0014c0013 a0014c0013	a0014c0013t0014 a0014c0013t0014	a0014c0013t0014g0035 a0014c0013t0014g0035	1	258	0.0039	2	c.191 others(19): Show c.1918+272_1918+273insGA		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding	6/6					INFO_REALIGN_3_PRIME	chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53086768	T T	TGG TGG	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0034 a0001c0001t0001g0034	1	258	0.0039	2	c.191 others(19): Show c.1918+465_1918+466dupGG		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding	6/6					INFO_REALIGN_3_PRIME	chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53087310	C C	CAG CAG	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00438.hp1 HG00735.hp1 others(98): Show HG00099.hp1 HG00438.hp1 HG00735.hp1 HG00738.hp1 HG01123.hp2 HG01243.hp1 HG01255.hp1 HG01515.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG02015.hp1 HG02109.hp1 HG02135.hp1 HG02145.hp1 HG02257.hp1 HG02258.hp1 HG02280.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03710.hp1 HG04115.hp1 NA18522.hp1 NA18906.hp1 NA18941.hp2 NA18943.hp1 NA18954.hp1 NA18959.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp2 NA18971.hp1 NA18972.hp1 NA18973.hp1 NA18975.hp1 NA18981.hp1 NA18988.hp1 NA18990.hp1 NA18991.hp2 NA18994.hp1 NA19000.hp1 NA19002.hp2 NA19010.hp2 NA19011.hp2 NA19030.hp1 NA19043.hp1 NA19055.hp1 NA19063.hp1 NA19064.hp1 NA19074.hp2 NA19084.hp2 NA19085.hp1 NA19087.hp1 NA19088.hp1 NA19089.hp1 NA19091.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1	a0001 a0004 a0006 others(2): Show a0001 a0004 a0006 a0011 a0014	a0001c0001 a0001c0017 a0004c0004 others(3): Show a0001c0001 a0001c0017 a0004c0004 a0006c0006 a0011c0014 a0014c0013	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0011 a0001c0001t0012 a0001c0017t0001 a0004c0004t0001 a0004c0004t0002 a0006c0006t0004 a0011c0014t0001 a0014c0013t0014	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0005 others(33): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0013 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0042 a0001c0001t0001g0048 a0001c0001t0002g0002 a0001c0001t0002g0005 a0001c0001t0002g0007 a0001c0001t0002g0031 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0003g0002 a0001c0001t0003g0047 a0001c0001t0005g0012 a0001c0001t0011g0002 a0001c0001t0012g0013 a0001c0017t0001g0004 a0004c0004t0001g0007 a0004c0004t0002g0002 a0006c0006t0004g0002 a0006c0006t0004g0007 a0011c0014t0001g0025 a0014c0013t0014g0035	101	258	0.3915	2	c.191 others(19): Show c.1919-464_1919-463dupGA		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding	6/6					INFO_REALIGN_3_PRIME	chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53088100	A A	AAG AAG	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19087.hp2 NA19087.hp2	a0016 a0016	a0016c0009 a0016c0009	a0016c0009t0009 a0016c0009t0009	a0016c0009t0009g0053 a0016c0009t0009g0053	1	258	0.0039	2	c.16 others(11): Show c.161_*162insAG		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding	7/7				162		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53088324	C C	CCT CCT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0014 a0014	a0014c0013 a0014c0013	a0014c0013t0014 a0014c0013t0014	a0014c0013t0014g0035 a0014c0013t0014g0035	1	258	0.0039	2	c.38 others(11): Show c.386_*387insTC		TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding	7/7				387	INFO_REALIGN_3_PRIME	chrX	TogoVar
TSPYL4_chr6_116244964_116259075	116246468	T T	TAC TAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp2 HG01516.hp2 HG01891.hp1 others(3): Show HG01243.hp2 HG01516.hp2 HG01891.hp1 HG02615.hp2 HG02965.hp2 HG03540.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0003c0004 a0001c0001 a0001c0002 a0003c0004	a0001c0001t0001 a0001c0002t0003 a0003c0004t0004 a0001c0001t0001 a0001c0002t0003 a0003c0004t0004	a0001c0001t0001g0000 a0001c0002t0003g0000 a0003c0004t0004g0000 a0001c0001t0001g0000 a0001c0002t0003g0000 a0003c0004t0004g0000	6	400	0.0150	2	c.62 others(13): Show c.6294_*6295dupGT		TSPYL4	ENSG00000187189.11	transcript	ENST00000420283.3	protein_coding					3495		chr6	TogoVar
TSPYL4_chr6_116244964_116259075	116249867	C C	CTT CTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02074.hp1 HG02074.hp2 HG02735.hp2 others(5): Show HG02074.hp1 HG02074.hp2 HG02735.hp2 HG03017.hp1 HG03017.hp2 HG03654.hp2 NA18947.hp2 NA21309.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0004c0006 a0001c0001 a0001c0002 a0004c0006	a0001c0001t0001 a0001c0002t0003 a0004c0006t0002 a0001c0001t0001 a0001c0002t0003 a0004c0006t0002	a0001c0001t0001g0000 a0001c0002t0003g0000 a0004c0006t0002g0000 a0001c0001t0001g0000 a0001c0002t0003g0000 a0004c0006t0002g0000	8	400	0.0200	2	c.28 others(13): Show c.2896_*2897insAA		TSPYL4	ENSG00000187189.11	transcript	ENST00000420283.3	protein_coding					96		chr6	TogoVar
TSPYL5_chr8_97268488_97282928	97272275	G G	GAC GAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 HG00408.hp1 HG00735.hp2 others(51): Show HG00280.hp2 HG00408.hp1 HG00735.hp2 HG00738.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01168.hp1 HG01168.hp2 HG01256.hp1 HG01358.hp1 HG01496.hp2 HG01934.hp2 HG01943.hp1 HG01981.hp1 HG02074.hp2 HG02083.hp2 HG02129.hp1 HG02165.hp1 HG02683.hp2 HG02698.hp2 HG02895.hp2 HG02897.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp2 HG03669.hp2 HG03710.hp1 HG03834.hp1 HG03927.hp2 HG04228.hp1 NA18941.hp2 NA18943.hp2 NA18947.hp1 NA18952.hp1 NA18961.hp1 NA18964.hp2 NA18970.hp1 NA18971.hp2 NA18974.hp2 NA18978.hp2 NA18981.hp2 NA18983.hp1 NA18989.hp2 NA18995.hp1 NA19000.hp2 NA19011.hp1 NA19057.hp1 NA19062.hp1 NA19065.hp2 NA19080.hp2 NA19089.hp2 NA19091.hp2 NA20905.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0004 a0001c0001 a0001c0003 a0002c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0009 a0001c0001t0012 a0001c0001t0027 a0001c0003t0001 a0002c0004t0008	a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0007g0000 others(5): Show a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0007g0000 a0001c0001t0009g0000 a0001c0001t0012g0000 a0001c0001t0027g0000 a0001c0003t0001g0000 a0002c0004t0008g0000	54	412	0.1311	2	c.43 others(13): Show c.4315_*4316insGT		TSPYL5	ENSG00000180543.5	transcript	ENST00000322128.5	protein_coding					1212		chr8	TogoVar
TSPYL5_chr8_97268488_97282928	97282526	C C	CGT CGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp1 HG00738.hp2 HG01099.hp1 others(15): Show HG00639.hp1 HG00738.hp2 HG01099.hp1 HG03209.hp1 HG03490.hp1 HG03579.hp2 HG04199.hp2 NA18612.hp1 NA18945.hp2 NA18960.hp1 NA18964.hp1 NA18973.hp1 NA18978.hp2 NA18982.hp2 NA18995.hp1 NA19080.hp2 NA19087.hp1 NA19091.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0005 others(1): Show a0001c0001 a0001c0003 a0001c0005 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0003t0001 a0001c0003t0031 a0001c0005t0004 a0002c0002t0003	a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0004g0000 others(4): Show a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0004g0000 a0001c0003t0001g0000 a0001c0003t0031g0000 a0001c0005t0004g0000 a0002c0002t0003g0000	18	412	0.0437	2	c.-46 others(13): Show c.-4683_-4682insAC		TSPYL5	ENSG00000180543.5	transcript	ENST00000322128.5	protein_coding					4599		chr8	TogoVar
TSPYL6_chr2_54248178_54261229	54249434	C C	CAA CAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00544.hp1 HG00738.hp1 others(13): Show HG00099.hp1 HG00544.hp1 HG00738.hp1 HG01256.hp2 HG01496.hp1 HG01934.hp2 HG01978.hp2 HG02300.hp2 HG02809.hp1 HG02886.hp1 HG03098.hp2 HG03927.hp1 NA18951.hp1 NA18973.hp1 NA18978.hp1 NA18991.hp2	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0011	a0001c0001 a0002c0002 a0005c0005 others(1): Show a0001c0001 a0002c0002 a0005c0005 a0011c0015	a0001c0001t0020 a0002c0002t0004 a0005c0005t0002 others(1): Show a0001c0001t0020 a0002c0002t0004 a0005c0005t0002 a0011c0015t0002	a0001c0001t0020g0000 a0002c0002t0004g0000 a0005c0005t0002g0000 others(1): Show a0001c0001t0020g0000 a0002c0002t0004g0000 a0005c0005t0002g0000 a0011c0015t0002g0000	16	436	0.0367	2	c.54 others(13): Show c.5483_*5484dupTT		TSPYL6	ENSG00000178021.11	transcript	ENST00000317802.9	protein_coding					3743		chr2	TogoVar
TSR1_chr17_2317396_2341457	2318619	A A	ATT ATT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00597.hp2 HG01993.hp1 HG02129.hp2 others(7): Show HG00597.hp2 HG01993.hp1 HG02129.hp2 HG02258.hp2 HG02602.hp1 HG02602.hp2 NA18950.hp2 NA18969.hp1 NA18993.hp2 NA18995.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(2): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0020 a0002c0002t0002	a0001c0001t0002g0003 a0001c0001t0002g0007 a0001c0001t0002g0024 others(4): Show a0001c0001t0002g0003 a0001c0001t0002g0007 a0001c0001t0002g0024 a0001c0001t0003g0131 a0001c0001t0004g0064 a0001c0001t0020g0080 a0002c0002t0002g0198	10	408	0.0245	2	c.55 others(13): Show c.5575_*5576dupAA		TSR1	ENSG00000167721.11	transcript	ENST00000301364.10	protein_coding					3776		chr17	TogoVar
TSR1_chr17_2317396_2341457	2320251	C C	CTT CTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00597.hp1 HG00738.hp2 HG00741.hp2 others(30): Show HG00597.hp1 HG00738.hp2 HG00741.hp2 HG01069.hp2 HG01071.hp1 HG01074.hp1 HG01081.hp2 HG01175.hp1 HG01891.hp2 HG01952.hp2 HG01981.hp2 HG02027.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02615.hp2 HG02895.hp1 HG02970.hp1 HG03927.hp1 HG04115.hp1 NA18522.hp2 NA18906.hp1 NA18967.hp2 NA18968.hp1 NA18975.hp1 NA18977.hp2 NA19002.hp2 NA19003.hp2 NA19004.hp1 NA19030.hp2 NA19080.hp1 NA19084.hp2 NA21309.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0005 a0010	a0001c0001 a0002c0002 a0003c0003 others(2): Show a0001c0001 a0002c0002 a0003c0003 a0005c0006 a0010c0013	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(9): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0012 a0001c0001t0014 a0002c0002t0001 a0002c0002t0002 a0003c0003t0004 a0005c0006t0010 a0010c0013t0004	a0001c0001t0001g0004 a0001c0001t0003g0002 a0001c0001t0003g0060 others(20): Show a0001c0001t0001g0004 a0001c0001t0003g0002 a0001c0001t0003g0060 a0001c0001t0003g0134 a0001c0001t0003g0135 a0001c0001t0003g0143 a0001c0001t0003g0146 a0001c0001t0003g0147 a0001c0001t0004g0022 a0001c0001t0005g0128 a0001c0001t0006g0016 a0001c0001t0012g0140 a0001c0001t0014g0059 a0002c0002t0001g0001 a0002c0002t0001g0006 a0002c0002t0001g0008 a0002c0002t0001g0026 a0002c0002t0001g0028 a0002c0002t0001g0195 a0002c0002t0002g0184 a0003c0003t0004g0160 a0005c0006t0010g0030 a0010c0013t0004g0141	33	408	0.0809	2	c.39 others(13): Show c.3943_*3944dupAA		TSR1	ENSG00000167721.11	transcript	ENST00000301364.10	protein_coding					2144		chr17	TogoVar
TSR1_chr17_2317396_2341457	2327416	C C	CAA CAA	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00733.hp1 HG00735.hp2 others(75): Show HG00609.hp2 HG00733.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01071.hp1 HG01074.hp1 HG01081.hp2 HG01109.hp2 HG01123.hp2 HG01167.hp2 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01346.hp1 HG01358.hp1 HG01496.hp1 HG01515.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp2 HG01952.hp2 HG01978.hp1 HG01981.hp2 HG01993.hp2 HG02109.hp1 HG02135.hp1 HG02145.hp2 HG02148.hp2 HG02257.hp2 HG02273.hp1 HG02559.hp1 HG02622.hp1 HG02818.hp2 HG02895.hp1 HG02897.hp2 HG02970.hp1 HG03017.hp1 HG03041.hp2 HG03130.hp1 HG03139.hp2 HG03239.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp2 HG03669.hp1 HG03704.hp1 HG03831.hp2 NA18522.hp2 NA18906.hp1 NA18939.hp2 NA18948.hp1 NA18961.hp1 NA18966.hp1 NA18968.hp2 NA18971.hp2 NA18972.hp2 NA18977.hp2 NA18979.hp2 NA18982.hp1 NA18983.hp1 NA18984.hp2 NA18993.hp2 NA18995.hp1 NA18998.hp2 NA19002.hp2 NA19003.hp2 NA19009.hp2 NA19030.hp2 NA19063.hp1 NA19078.hp2 NA19081.hp1 NA19084.hp1 NA20129.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0004 a0001c0009 others(1): Show a0001c0001 a0001c0004 a0001c0009 a0003c0003	a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 others(8): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0004t0005 a0001c0009t0004 a0003c0003t0004 a0003c0003t0011	a0001c0001t0003g0002 a0001c0001t0003g0019 a0001c0001t0003g0029 others(38): Show a0001c0001t0003g0002 a0001c0001t0003g0019 a0001c0001t0003g0029 a0001c0001t0003g0039 a0001c0001t0003g0040 a0001c0001t0003g0053 a0001c0001t0003g0054 a0001c0001t0003g0060 a0001c0001t0003g0061 a0001c0001t0003g0129 a0001c0001t0003g0131 a0001c0001t0003g0137 a0001c0001t0003g0143 a0001c0001t0003g0146 a0001c0001t0003g0147 a0001c0001t0003g0148 a0001c0001t0003g0149 a0001c0001t0003g0154 a0001c0001t0003g0155 a0001c0001t0003g0156 a0001c0001t0004g0022 a0001c0001t0004g0088 a0001c0001t0004g0090 a0001c0001t0004g0092 a0001c0001t0004g0172 a0001c0001t0005g0025 a0001c0001t0005g0128 a0001c0001t0005g0133 a0001c0001t0005g0139 a0001c0001t0008g0017 a0001c0001t0008g0130 a0001c0001t0012g0138 a0001c0001t0012g0140 a0001c0001t0013g0132 a0001c0001t0013g0136 a0001c0001t0014g0059 a0001c0004t0005g0055 a0001c0004t0005g0145 a0001c0009t0004g0046 a0003c0003t0004g0160 a0003c0003t0011g0165	78	408	0.1912	2	c.190 others(21): Show c.1903+1925_1903+1926dupTT		TSR1	ENSG00000167721.11	transcript	ENST00000301364.10	protein_coding	11/14						chr17	TogoVar
TSR1_chr17_2317396_2341457	2331535	C C	CTT CTT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp1 HG00438.hp1 others(227): Show HG00140.hp2 HG00280.hp1 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp2 HG00597.hp1 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp2 HG01069.hp2 HG01071.hp1 HG01074.hp1 HG01081.hp2 HG01109.hp2 HG01123.hp2 HG01167.hp2 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp2 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02273.hp1 HG02273.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02698.hp2 HG02717.hp1 HG02735.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03017.hp1 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp2 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03704.hp1 HG03831.hp2 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp2 NA18522.hp2 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18939.hp2 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18948.hp1 NA18948.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp2 NA18953.hp2 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18960.hp2 NA18961.hp1 NA18962.hp2 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18987.hp2 NA18988.hp1 NA18989.hp1 NA18990.hp2 NA18992.hp2 NA18993.hp2 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp2 NA19004.hp2 NA19005.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19011.hp1 NA19012.hp1 NA19012.hp2 NA19030.hp2 NA19043.hp2 NA19055.hp1 NA19055.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19065.hp2 NA19066.hp1 NA19068.hp1 NA19070.hp1 NA19072.hp2 NA19078.hp2 NA19080.hp1 NA19081.hp1 NA19081.hp2 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp2 NA19089.hp1 NA19091.hp1 NA19240.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA21309.hp1	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0009 a0010 a0012 a0014	a0001c0001 a0001c0004 a0001c0009 others(9): Show a0001c0001 a0001c0004 a0001c0009 a0002c0002 a0002c0007 a0002c0023 a0003c0003 a0003c0021 a0009c0019 a0010c0013 a0012c0018 a0014c0017	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(19): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0004t0005 a0001c0009t0004 a0002c0002t0001 a0002c0002t0002 a0002c0007t0001 a0002c0023t0001 a0003c0003t0004 a0003c0003t0011 a0003c0021t0004 a0009c0019t0003 a0010c0013t0004 a0012c0018t0001 a0014c0017t0001	a0001c0001t0001g0011 a0001c0001t0001g0041 a0001c0001t0001g0042 others(109): Show a0001c0001t0001g0011 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0047 a0001c0001t0001g0057 a0001c0001t0001g0093 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0173 a0001c0001t0002g0087 a0001c0001t0002g0176 a0001c0001t0003g0002 a0001c0001t0003g0013 a0001c0001t0003g0018 a0001c0001t0003g0019 a0001c0001t0003g0029 a0001c0001t0003g0039 a0001c0001t0003g0040 a0001c0001t0003g0053 a0001c0001t0003g0054 a0001c0001t0003g0056 a0001c0001t0003g0060 a0001c0001t0003g0061 a0001c0001t0003g0127 a0001c0001t0003g0129 a0001c0001t0003g0131 a0001c0001t0003g0134 a0001c0001t0003g0135 a0001c0001t0003g0137 a0001c0001t0003g0142 a0001c0001t0003g0143 a0001c0001t0003g0144 a0001c0001t0003g0146 a0001c0001t0003g0147 a0001c0001t0003g0148 a0001c0001t0003g0149 a0001c0001t0003g0154 a0001c0001t0003g0155 a0001c0001t0003g0156 a0001c0001t0004g0022 a0001c0001t0004g0088 a0001c0001t0004g0089 a0001c0001t0004g0090 a0001c0001t0004g0091 a0001c0001t0004g0092 a0001c0001t0004g0172 a0001c0001t0005g0025 a0001c0001t0005g0128 a0001c0001t0005g0133 a0001c0001t0005g0139 a0001c0001t0008g0017 a0001c0001t0008g0130 a0001c0001t0012g0138 a0001c0001t0012g0140 a0001c0001t0013g0132 a0001c0001t0013g0136 a0001c0001t0014g0059 a0001c0004t0005g0055 a0001c0004t0005g0145 a0001c0009t0004g0046 a0002c0002t0001g0001 a0002c0002t0001g0006 a0002c0002t0001g0008 a0002c0002t0001g0021 a0002c0002t0001g0026 a0002c0002t0001g0027 a0002c0002t0001g0028 a0002c0002t0001g0126 a0002c0002t0001g0171 a0002c0002t0001g0174 a0002c0002t0001g0178 a0002c0002t0001g0180 a0002c0002t0001g0183 a0002c0002t0001g0185 a0002c0002t0001g0186 a0002c0002t0001g0187 a0002c0002t0001g0189 a0002c0002t0001g0190 a0002c0002t0001g0191 a0002c0002t0001g0192 a0002c0002t0001g0193 a0002c0002t0001g0195 a0002c0002t0001g0197 a0002c0002t0001g0199 a0002c0002t0001g0200 a0002c0002t0001g0201 a0002c0002t0002g0177 a0002c0002t0002g0179 a0002c0002t0002g0181 a0002c0002t0002g0184 a0002c0002t0002g0188 a0002c0002t0002g0198 a0002c0007t0001g0045 a0002c0023t0001g0196 a0003c0003t0004g0020 a0003c0003t0004g0044 a0003c0003t0004g0158 a0003c0003t0004g0159 a0003c0003t0004g0160 a0003c0003t0004g0161 a0003c0003t0004g0162 a0003c0003t0004g0163 a0003c0003t0004g0166 a0003c0003t0011g0164 a0003c0003t0011g0165 a0003c0021t0004g0167 a0009c0019t0003g0150 a0010c0013t0004g0141 a0012c0018t0001g0194 a0014c0017t0001g0182	230	408	0.5637	2	c.149 others(19): Show c.1497-427_1497-426insAA		TSR1	ENSG00000167721.11	transcript	ENST00000301364.10	protein_coding	8/14						chr17	TogoVar

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