Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TSPEAR_chr21_44492893_44716572	44594822	A A	ATT ATT	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG00642.hp2 HG01074.hp2 others(14): Show HG00544.hp1 HG00642.hp2 HG01074.hp2 HG01081.hp2 HG01175.hp1 HG01261.hp1 HG01261.hp2 HG01433.hp2 HG02109.hp1 HG02615.hp1 HG02738.hp1 HG02818.hp1 HG03041.hp1 HG03195.hp2 HG03486.hp1 HG03540.hp1 NA18982.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0009 a0001c0001t0018	a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0051 others(14): Show a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0051 a0001c0001t0001g0081 a0001c0001t0001g0120 a0001c0001t0001g0157 a0001c0001t0001g0160 a0001c0001t0001g0168 a0001c0001t0001g0170 a0001c0001t0001g0208 a0001c0001t0001g0223 a0001c0001t0001g0286 a0001c0001t0003g0196 a0001c0001t0004g0217 a0001c0001t0005g0236 a0001c0001t0009g0234 a0001c0001t0018g0135	17	294	0.0578	2	c.83- others(19): Show c.83-26819_83-26818dupAA	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPEAR_chr21_44492893_44716572	44602039	C C	CTG CTG	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00544.hp2 HG00621.hp2 others(73): Show HG00423.hp1 HG00544.hp2 HG00621.hp2 HG01081.hp2 HG01167.hp1 HG01243.hp2 HG01261.hp1 HG01496.hp1 HG01516.hp1 HG01884.hp1 HG01891.hp1 HG01981.hp1 HG02109.hp1 HG02145.hp1 HG02145.hp2 HG02155.hp2 HG02257.hp1 HG02258.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02723.hp1 HG02723.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03490.hp2 HG03492.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp2 HG03669.hp1 HG03688.hp2 HG03710.hp2 HG03834.hp1 HG03927.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp2 HG06807.hp2 NA18906.hp2 NA18942.hp2 NA18944.hp1 NA18950.hp1 NA18960.hp1 NA18975.hp2 NA19009.hp1 NA19010.hp1 NA19030.hp2 NA19043.hp1 NA19057.hp2 NA19060.hp1 NA19070.hp2	a0001 a0008 a0009 others(1): Show a0001 a0008 a0009 a0010	a0001c0001 a0001c0008 a0001c0010 others(4): Show a0001c0001 a0001c0008 a0001c0010 a0001c0015 a0008c0019 a0009c0016 a0010c0013	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(13): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0009 a0001c0001t0011 a0001c0001t0015 a0001c0001t0019 a0001c0008t0020 a0001c0010t0001 a0001c0015t0002 a0008c0019t0001 a0009c0016t0001 a0010c0013t0001	a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0008 others(73): Show a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0050 a0001c0001t0001g0053 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0071 a0001c0001t0001g0083 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0113 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0137 a0001c0001t0001g0143 a0001c0001t0001g0157 a0001c0001t0001g0160 a0001c0001t0001g0190 a0001c0001t0001g0199 a0001c0001t0001g0203 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0208 a0001c0001t0001g0219 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0230 a0001c0001t0001g0235 a0001c0001t0001g0245 a0001c0001t0001g0259 a0001c0001t0001g0268 a0001c0001t0001g0272 a0001c0001t0001g0274 a0001c0001t0001g0291 a0001c0001t0002g0258 a0001c0001t0003g0003 a0001c0001t0003g0004 a0001c0001t0003g0013 a0001c0001t0003g0134 a0001c0001t0003g0196 a0001c0001t0003g0218 a0001c0001t0003g0224 a0001c0001t0004g0031 a0001c0001t0004g0033 a0001c0001t0004g0204 a0001c0001t0004g0217 a0001c0001t0005g0006 a0001c0001t0005g0102 a0001c0001t0005g0236 a0001c0001t0007g0103 a0001c0001t0007g0124 a0001c0001t0007g0292 a0001c0001t0009g0234 a0001c0001t0011g0042 a0001c0001t0015g0152 a0001c0001t0019g0207 a0001c0008t0020g0012 a0001c0010t0001g0098 a0001c0015t0002g0233 a0008c0019t0001g0022 a0009c0016t0001g0275 a0010c0013t0001g0192	76	294	0.2585	2	c.83- others(19): Show c.83-34036_83-34035dupCA	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPEAR_chr21_44492893_44716572	44615549	G G	GTT GTT	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG04184.hp2 NA18747.hp2 others(9): Show HG00642.hp2 HG04184.hp2 NA18747.hp2 NA18940.hp1 NA18940.hp2 NA18949.hp1 NA18949.hp2 NA19010.hp2 NA19030.hp2 NA19088.hp2 NA20300.hp1 homoSapiens_chm13v2.hp1	a0001 a0013 a0001 a0013	a0001c0001 a0013c0005 a0001c0001 a0013c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0018 a0013c0005t0001	a0001c0001t0001g0057 a0001c0001t0001g0138 a0001c0001t0001g0151 others(9): Show a0001c0001t0001g0057 a0001c0001t0001g0138 a0001c0001t0001g0151 a0001c0001t0001g0155 a0001c0001t0001g0249 a0001c0001t0001g0256 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0002g0055 a0001c0001t0007g0124 a0001c0001t0018g0135 a0013c0005t0001g0294	12	294	0.0408	2	c.83- others(19): Show c.83-47546_83-47545dupAA	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPEAR_chr21_44492893_44716572	44631081	G G	GAA GAA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp2 HG00323.hp2 others(161): Show HG00099.hp2 HG00280.hp2 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01257.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01496.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01952.hp2 HG01975.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02055.hp2 HG02074.hp1 HG02080.hp2 HG02109.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02258.hp2 HG02280.hp2 HG02293.hp1 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02622.hp1 HG02647.hp1 HG02723.hp1 HG02738.hp2 HG02818.hp1 HG02818.hp2 HG02896.hp1 HG02970.hp1 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03098.hp1 HG03098.hp2 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp1 HG03453.hp1 HG03471.hp1 HG03490.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03710.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp2 HG06807.hp2 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18942.hp2 NA18944.hp1 NA18945.hp2 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18951.hp1 NA18954.hp2 NA18955.hp2 NA18960.hp1 NA18971.hp1 NA18971.hp2 NA18975.hp1 NA18977.hp1 NA18977.hp2 NA18982.hp1 NA18986.hp2 NA18990.hp2 NA19005.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19057.hp2 NA19060.hp1 NA19064.hp1 NA19070.hp2 NA19077.hp1 NA19080.hp1 NA19080.hp2 NA19087.hp1 NA19088.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp2 NA20300.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0005 a0006 a0009 a0012 a0013	a0001c0001 a0001c0002 a0001c0004 others(10): Show a0001c0001 a0001c0002 a0001c0004 a0001c0007 a0001c0010 a0001c0015 a0002c0003 a0003c0012 a0005c0017 a0006c0014 a0009c0016 a0012c0021 a0013c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(24): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0001t0018 a0001c0001t0019 a0001c0001t0022 a0001c0002t0008 a0001c0004t0010 a0001c0007t0023 a0001c0010t0001 a0001c0015t0002 a0002c0003t0001 a0003c0012t0025 a0005c0017t0001 a0006c0014t0001 a0009c0016t0001 a0012c0021t0013 a0013c0005t0001	a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0018 others(161): Show a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0029 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0040 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0072 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0113 a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0194 a0001c0001t0001g0197 a0001c0001t0001g0202 a0001c0001t0001g0206 a0001c0001t0001g0208 a0001c0001t0001g0212 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0230 a0001c0001t0001g0232 a0001c0001t0001g0235 a0001c0001t0001g0238 a0001c0001t0001g0240 a0001c0001t0001g0242 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0274 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0290 a0001c0001t0001g0291 a0001c0001t0002g0055 a0001c0001t0002g0109 a0001c0001t0002g0112 a0001c0001t0002g0198 a0001c0001t0002g0258 a0001c0001t0002g0266 a0001c0001t0003g0013 a0001c0001t0003g0196 a0001c0001t0003g0237 a0001c0001t0003g0239 a0001c0001t0003g0241 a0001c0001t0003g0247 a0001c0001t0003g0293 a0001c0001t0004g0033 a0001c0001t0004g0090 a0001c0001t0004g0217 a0001c0001t0005g0236 a0001c0001t0006g0104 a0001c0001t0006g0183 a0001c0001t0006g0264 a0001c0001t0006g0265 a0001c0001t0007g0124 a0001c0001t0007g0292 a0001c0001t0009g0037 a0001c0001t0009g0149 a0001c0001t0009g0234 a0001c0001t0011g0042 a0001c0001t0012g0227 a0001c0001t0014g0067 a0001c0001t0015g0152 a0001c0001t0018g0135 a0001c0001t0019g0207 a0001c0001t0022g0094 a0001c0002t0008g0215 a0001c0004t0010g0088 a0001c0004t0010g0148 a0001c0007t0023g0214 a0001c0010t0001g0098 a0001c0015t0002g0233 a0002c0003t0001g0107 a0002c0003t0001g0127 a0002c0003t0001g0248 a0003c0012t0025g0111 a0005c0017t0001g0154 a0006c0014t0001g0167 a0009c0016t0001g0275 a0012c0021t0013g0041 a0013c0005t0001g0294	164	294	0.5578	2	c.83- others(19): Show c.83-63078_83-63077dupTT	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPEAR_chr21_44492893_44716572	44635345	C C	CAA CAA	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02486.hp2 HG03579.hp1 others(3): Show HG02451.hp2 HG02486.hp2 HG03579.hp1 HG03579.hp2 HG04184.hp2 NA18975.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0001 a0001c0001t0003 a0001c0001t0004	a0001c0001t0001g0024 a0001c0001t0001g0138 a0001c0001t0001g0142 others(3): Show a0001c0001t0001g0024 a0001c0001t0001g0138 a0001c0001t0001g0142 a0001c0001t0001g0238 a0001c0001t0003g0013 a0001c0001t0004g0090	6	294	0.0204	2	c.83- others(19): Show c.83-67342_83-67341dupTT	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPEAR_chr21_44492893_44716572	44646124	C C	CAA CAA	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00423.hp1 HG00597.hp1 others(16): Show HG00280.hp2 HG00423.hp1 HG00597.hp1 HG00621.hp2 HG00639.hp1 HG01070.hp2 HG01346.hp2 HG02647.hp1 HG02976.hp1 HG03834.hp1 HG04204.hp1 NA18906.hp1 NA18940.hp1 NA18977.hp2 NA19010.hp2 NA19012.hp2 NA19057.hp2 NA19060.hp1 homoSapiens_chm13v2.hp1	a0001 a0003 a0013 a0001 a0003 a0013	a0001c0001 a0001c0002 a0001c0015 others(2): Show a0001c0001 a0001c0002 a0001c0015 a0003c0012 a0013c0005	a0001c0001t0001 a0001c0001t0002 a0001c0002t0008 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0008 a0001c0015t0002 a0003c0012t0025 a0013c0005t0001	a0001c0001t0001g0049 a0001c0001t0001g0060 a0001c0001t0001g0065 others(16): Show a0001c0001t0001g0049 a0001c0001t0001g0060 a0001c0001t0001g0065 a0001c0001t0001g0080 a0001c0001t0001g0092 a0001c0001t0001g0095 a0001c0001t0001g0113 a0001c0001t0001g0161 a0001c0001t0001g0256 a0001c0001t0001g0261 a0001c0001t0001g0268 a0001c0001t0001g0271 a0001c0001t0001g0274 a0001c0001t0001g0291 a0001c0001t0002g0198 a0001c0002t0008g0215 a0001c0015t0002g0233 a0003c0012t0025g0111 a0013c0005t0001g0294	19	294	0.0646	2	c.82+ others(19): Show c.82+65307_82+65308dupTT	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPEAR_chr21_44492893_44716572	44673905	C C	CAA CAA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01074.hp1 HG02257.hp1 others(3): Show HG00099.hp2 HG01074.hp1 HG02257.hp1 HG02602.hp1 HG03579.hp1 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0022	a0001c0001t0001g0086 a0001c0001t0001g0093 a0001c0001t0001g0222 others(3): Show a0001c0001t0001g0086 a0001c0001t0001g0093 a0001c0001t0001g0222 a0001c0001t0003g0224 a0001c0001t0004g0090 a0001c0001t0022g0094	6	294	0.0204	2	c.82+ others(19): Show c.82+37526_82+37527dupTT	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPEAR_chr21_44492893_44716572	44674118	C C	CAA CAA	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG01258.hp1 HG01891.hp1 others(25): Show HG01257.hp1 HG01258.hp1 HG01891.hp1 HG02109.hp1 HG02145.hp1 HG02145.hp2 HG02451.hp2 HG02559.hp2 HG02572.hp2 HG02615.hp2 HG02647.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp2 HG02896.hp2 HG02970.hp2 HG03041.hp2 HG03139.hp1 HG03195.hp1 HG03209.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp2 NA19043.hp1 NA19043.hp2 NA20129.hp1	a0001 a0004 a0007 a0001 a0004 a0007	a0001c0001 a0001c0008 a0004c0006 others(1): Show a0001c0001 a0001c0008 a0004c0006 a0007c0009	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0024 a0001c0008t0020 a0004c0006t0004 a0007c0009t0001	a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0007 others(25): Show a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0001t0001g0023 a0001c0001t0001g0050 a0001c0001t0001g0089 a0001c0001t0001g0133 a0001c0001t0001g0245 a0001c0001t0003g0003 a0001c0001t0003g0004 a0001c0001t0003g0013 a0001c0001t0003g0134 a0001c0001t0003g0218 a0001c0001t0004g0031 a0001c0001t0004g0217 a0001c0001t0004g0244 a0001c0001t0005g0006 a0001c0001t0005g0100 a0001c0001t0005g0125 a0001c0001t0005g0246 a0001c0001t0007g0103 a0001c0001t0024g0285 a0001c0008t0020g0012 a0004c0006t0004g0243 a0007c0009t0001g0010	28	294	0.0952	2	c.82+ others(19): Show c.82+37313_82+37314dupTT	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPEAR_chr21_44492893_44716572	44674731	A A	AGT AGT	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01167.hp1 HG01358.hp2 others(10): Show HG01106.hp2 HG01167.hp1 HG01358.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02523.hp2 HG03669.hp2 HG03688.hp1 NA19005.hp1 NA19009.hp1 NA19009.hp2 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0011 a0001c0001t0016 others(1): Show a0001c0001t0001 a0001c0001t0011 a0001c0001t0016 a0001c0002t0008	a0001c0001t0001g0082 a0001c0001t0001g0171 a0001c0001t0001g0174 others(10): Show a0001c0001t0001g0082 a0001c0001t0001g0171 a0001c0001t0001g0174 a0001c0001t0001g0187 a0001c0001t0001g0190 a0001c0001t0001g0194 a0001c0001t0001g0199 a0001c0001t0001g0231 a0001c0001t0001g0278 a0001c0001t0001g0289 a0001c0001t0011g0188 a0001c0001t0016g0175 a0001c0002t0008g0121	13	294	0.0442	2	c.82+ others(19): Show c.82+36700_82+36701dupAC	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPEAR_chr21_44492893_44716572	44689712	A A	AAT AAT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG01074.hp1 HG01168.hp2 others(11): Show HG00323.hp1 HG01074.hp1 HG01168.hp2 HG01175.hp1 HG01258.hp2 HG02257.hp1 HG02602.hp1 HG03139.hp1 HG04228.hp2 NA18747.hp1 NA18948.hp2 NA18949.hp1 NA18955.hp1 NA19011.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0022	a0001c0001t0001g0023 a0001c0001t0001g0063 a0001c0001t0001g0086 others(11): Show a0001c0001t0001g0023 a0001c0001t0001g0063 a0001c0001t0001g0086 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0164 a0001c0001t0001g0186 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0002g0055 a0001c0001t0002g0181 a0001c0001t0002g0184 a0001c0001t0003g0224 a0001c0001t0022g0094	14	294	0.0476	2	c.82+ others(19): Show c.82+21719_82+21720dupAT	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPEAR_chr21_44492893_44716572	44699377	C C	CAA CAA	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG01175.hp2 HG01192.hp1 others(13): Show HG01123.hp2 HG01175.hp2 HG01192.hp1 HG01243.hp2 HG01257.hp1 HG01258.hp1 HG01884.hp2 HG02486.hp2 HG02809.hp2 HG02886.hp1 HG02896.hp1 HG03486.hp2 HG04115.hp1 NA18954.hp2 NA19011.hp2 NA19064.hp1	a0001 a0004 a0007 a0001 a0004 a0007	a0001c0001 a0001c0002 a0004c0006 others(1): Show a0001c0001 a0001c0002 a0004c0006 a0007c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0019 a0001c0002t0008 a0004c0006t0004 a0007c0009t0001	a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 others(13): Show a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0210 a0001c0001t0001g0238 a0001c0001t0001g0245 a0001c0001t0001g0284 a0001c0001t0002g0266 a0001c0001t0003g0216 a0001c0001t0004g0244 a0001c0001t0006g0264 a0001c0001t0006g0265 a0001c0001t0019g0207 a0001c0002t0008g0030 a0004c0006t0004g0243 a0007c0009t0001g0010	16	294	0.0544	2	c.82+ others(19): Show c.82+12054_82+12055dupTT	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPEAR_chr21_44492893_44716572	44704249	A A	ACC ACC	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00438.hp1 HG00597.hp1 others(18): Show HG00423.hp1 HG00438.hp1 HG00597.hp1 HG00639.hp2 HG01123.hp1 HG01261.hp1 HG01346.hp1 HG01981.hp1 HG02055.hp1 HG02109.hp2 HG02602.hp2 HG02738.hp2 HG02895.hp1 HG02895.hp2 HG03139.hp2 HG03486.hp1 HG03490.hp2 HG03492.hp1 NA18971.hp1 NA19080.hp1 NA19091.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0018 others(2): Show a0001c0001 a0001c0002 a0001c0018 a0002c0003 a0003c0012	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0002t0008 a0001c0018t0001 a0002c0003t0001 a0003c0012t0025	a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0105 others(18): Show a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0132 a0001c0001t0001g0166 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0002g0112 a0001c0001t0005g0125 a0001c0001t0006g0104 a0001c0002t0008g0121 a0001c0018t0001g0099 a0002c0003t0001g0107 a0002c0003t0001g0248 a0003c0012t0025g0111	21	294	0.0714	2	c.82+ others(17): Show c.82+7182_82+7183dupGG	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPEAR_chr21_44492893_44716572	44707302	T T	TGG TGG	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(39): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp1 HG00438.hp1 HG00741.hp2 HG01074.hp1 HG01106.hp1 HG01168.hp2 HG01175.hp1 HG01258.hp2 HG01346.hp1 HG01517.hp1 HG02451.hp2 HG02559.hp2 HG02622.hp2 HG02723.hp1 HG02896.hp2 HG02976.hp1 HG03098.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp2 HG03486.hp1 HG03490.hp2 HG03492.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03927.hp2 HG04204.hp1 HG04228.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18971.hp1 NA18990.hp2 NA19030.hp2 NA19088.hp2 NA19091.hp1 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0001c0008 others(3): Show a0001c0001 a0001c0004 a0001c0008 a0001c0010 a0001c0015 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0004t0010 a0001c0008t0020 a0001c0010t0001 a0001c0015t0002 a0002c0003t0001	a0001c0001t0001g0016 a0001c0001t0001g0020 a0001c0001t0001g0063 others(39): Show a0001c0001t0001g0016 a0001c0001t0001g0020 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0089 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0095 a0001c0001t0001g0101 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0113 a0001c0001t0001g0115 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0151 a0001c0001t0001g0157 a0001c0001t0001g0159 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0278 a0001c0001t0002g0109 a0001c0001t0003g0013 a0001c0001t0003g0091 a0001c0001t0003g0218 a0001c0001t0004g0090 a0001c0001t0005g0102 a0001c0001t0006g0104 a0001c0001t0007g0103 a0001c0001t0007g0124 a0001c0001t0009g0149 a0001c0004t0010g0088 a0001c0004t0010g0148 a0001c0008t0020g0012 a0001c0010t0001g0098 a0001c0015t0002g0233 a0002c0003t0001g0107	42	294	0.1429	2	c.82+ others(17): Show c.82+4129_82+4130dupCC	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPEAR_chr21_44492893_44716572	44708007	G G	GCA GCA	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG02040.hp1 HG02257.hp2 others(18): Show HG01934.hp1 HG02040.hp1 HG02257.hp2 HG02300.hp2 HG02572.hp2 HG02723.hp1 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG03209.hp2 HG03453.hp2 HG03486.hp2 HG03490.hp1 HG06807.hp1 NA18950.hp1 NA19009.hp1 NA19010.hp1 NA19043.hp1 NA19056.hp1 NA19087.hp1 NA19087.hp2	a0001 a0007 a0012 a0001 a0007 a0012	a0001c0001 a0001c0008 a0007c0009 others(1): Show a0001c0001 a0001c0008 a0007c0009 a0012c0021	a0001c0001t0001 a0001c0001t0005 a0001c0001t0007 others(5): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0007 a0001c0001t0009 a0001c0001t0011 a0001c0008t0020 a0007c0009t0001 a0012c0021t0013	a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0011 others(18): Show a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0023 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0059 a0001c0001t0001g0070 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0221 a0001c0001t0001g0235 a0001c0001t0005g0006 a0001c0001t0007g0009 a0001c0001t0009g0234 a0001c0001t0011g0042 a0001c0008t0020g0012 a0007c0009t0001g0010 a0012c0021t0013g0041	21	294	0.0714	2	c.82+ others(17): Show c.82+3424_82+3425dupTG	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPEAR_chr21_44492893_44716572	44710595	C C	CAG CAG	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02572.hp2 HG02723.hp2 others(7): Show HG02145.hp2 HG02572.hp2 HG02723.hp2 HG02970.hp2 HG03041.hp2 HG03209.hp2 HG03453.hp2 HG03486.hp2 HG06807.hp1 NA19043.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0001c0008 a0007c0009 a0001c0001 a0001c0008 a0007c0009	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0008t0020 a0007c0009t0001	a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0008 others(7): Show a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0003g0003 a0001c0001t0003g0004 a0001c0001t0005g0006 a0001c0001t0007g0009 a0001c0008t0020g0012 a0007c0009t0001g0010	10	294	0.0340	2	c.82+ others(15): Show c.82+836_82+837dupCT	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPOAP1_chr17_58296231_58333795	58330048	G G	GAT GAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01106.hp2 HG01109.hp2 HG01243.hp1 others(5): Show HG01106.hp2 HG01109.hp2 HG01243.hp1 HG01358.hp1 HG02630.hp1 HG02723.hp1 HG03704.hp2 NA20752.hp2	a0006 a0010 a0029 a0006 a0010 a0029	a0006c0008 a0010c0020 a0029c0085 a0006c0008 a0010c0020 a0029c0085	a0006c0008t0004 a0006c0008t0007 a0010c0020t0009 others(1): Show a0006c0008t0004 a0006c0008t0007 a0010c0020t0009 a0029c0085t0004	a0006c0008t0004g0011 a0006c0008t0007g0022 a0010c0020t0009g0052 others(1): Show a0006c0008t0004g0011 a0006c0008t0007g0022 a0010c0020t0009g0052 a0029c0085t0004g0190	8	342	0.0234	2	c.-21 others(13): Show c.-2129_-2128insAT	TSPOAP1	ENSG00000005379.17	transcript	ENST00000343736.9	protein_coding		1254		chr17	TogoVar
TSPOAP1_chr17_58296231_58333795	58330156	T T	TTA TTA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00323.hp1 HG00423.hp1 others(113): Show HG00099.hp2 HG00323.hp1 HG00423.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00735.hp1 HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01081.hp1 HG01106.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp2 HG01255.hp1 HG01361.hp1 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01517.hp2 HG01884.hp2 HG01952.hp2 HG01978.hp2 HG02015.hp1 HG02015.hp2 HG02055.hp1 HG02071.hp1 HG02074.hp1 HG02074.hp2 HG02129.hp2 HG02135.hp2 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp2 HG02486.hp2 HG02622.hp1 HG02630.hp2 HG02717.hp1 HG02735.hp1 HG02738.hp1 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03041.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03704.hp1 HG03831.hp1 HG03834.hp1 HG03927.hp2 HG03942.hp2 HG04199.hp1 HG04204.hp2 NA18612.hp1 NA18906.hp2 NA18944.hp1 NA18946.hp2 NA18951.hp1 NA18954.hp1 NA18971.hp2 NA18986.hp1 NA18986.hp2 NA18994.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19003.hp2 NA19007.hp2 NA19010.hp2 NA19011.hp2 NA19030.hp2 NA19065.hp2 NA19066.hp1 NA19068.hp1 NA19076.hp1 NA19077.hp2 NA19078.hp2 NA19081.hp1 NA19082.hp2 NA19085.hp1 NA19240.hp2 NA20300.hp1 NA20752.hp1 NA20805.hp2 NA20905.hp1 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(24): Show a0001 a0002 a0003 a0005 a0007 a0008 a0009 a0011 a0014 a0019 a0020 a0022 a0025 a0027 a0033 a0035 a0036 a0037 a0042 a0043 a0044 a0046 a0047 a0050 a0052 a0058 a0063	a0001c0001 a0001c0042 a0001c0043 others(28): Show a0001c0001 a0001c0042 a0001c0043 a0002c0007 a0003c0003 a0003c0050 a0005c0006 a0007c0012 a0008c0010 a0009c0013 a0011c0011 a0014c0014 a0019c0024 a0020c0057 a0020c0059 a0022c0053 a0025c0041 a0027c0052 a0033c0066 a0035c0039 a0036c0046 a0037c0064 a0042c0051 a0043c0056 a0044c0040 a0046c0061 a0047c0067 a0050c0045 a0052c0055 a0058c0058 a0063c0038	a0001c0001t0001 a0001c0001t0002 a0001c0001t0017 others(30): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0017 a0001c0042t0001 a0001c0043t0001 a0002c0007t0001 a0003c0003t0002 a0003c0050t0001 a0005c0006t0001 a0007c0012t0001 a0008c0010t0001 a0009c0013t0001 a0011c0011t0001 a0014c0014t0003 a0019c0024t0001 a0020c0057t0001 a0020c0059t0008 a0022c0053t0001 a0025c0041t0001 a0027c0052t0002 a0033c0066t0002 a0035c0039t0001 a0036c0046t0001 a0037c0064t0001 a0042c0051t0002 a0043c0056t0001 a0044c0040t0001 a0046c0061t0002 a0047c0067t0001 a0050c0045t0003 a0052c0055t0001 a0058c0058t0001 a0063c0038t0014	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0007 others(65): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0086 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0095 a0001c0001t0001g0098 a0001c0001t0001g0103 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0002g0205 a0001c0001t0017g0199 a0001c0042t0001g0090 a0001c0043t0001g0091 a0002c0007t0001g0006 a0003c0003t0002g0002 a0003c0003t0002g0203 a0003c0003t0002g0204 a0003c0050t0001g0112 a0005c0006t0001g0034 a0007c0012t0001g0079 a0007c0012t0001g0087 a0007c0012t0001g0099 a0007c0012t0001g0101 a0008c0010t0001g0030 a0009c0013t0001g0009 a0011c0011t0001g0094 a0011c0011t0001g0097 a0011c0011t0001g0110 a0011c0011t0001g0121 a0014c0014t0003g0036 a0019c0024t0001g0035 a0020c0057t0001g0116 a0020c0059t0008g0096 a0022c0053t0001g0108 a0025c0041t0001g0105 a0027c0052t0002g0202 a0033c0066t0002g0201 a0035c0039t0001g0119 a0036c0046t0001g0115 a0037c0064t0001g0102 a0042c0051t0002g0200 a0043c0056t0001g0085 a0044c0040t0001g0120 a0046c0061t0002g0198 a0047c0067t0001g0100 a0050c0045t0003g0092 a0052c0055t0001g0104 a0058c0058t0001g0093 a0063c0038t0014g0084	116	342	0.3392	2	c.-22 others(13): Show c.-2237_-2236insTA	TSPOAP1	ENSG00000005379.17	transcript	ENST00000343736.9	protein_coding		1362		chr17	TogoVar
TSPO_chr22_43146559_43168242	43146574	C C	CAA CAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00408.hp1 others(136): Show HG00099.hp1 HG00099.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00558.hp1 HG00558.hp2 HG00733.hp1 HG00741.hp1 HG01070.hp2 HG01071.hp2 HG01167.hp2 HG01168.hp1 HG01255.hp1 HG01256.hp1 HG01258.hp2 HG01261.hp1 HG01884.hp2 HG01928.hp1 HG01952.hp1 HG01952.hp2 HG01981.hp2 HG02004.hp2 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02300.hp1 HG02523.hp1 HG02559.hp2 HG02698.hp2 HG02738.hp2 HG02970.hp1 HG03017.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03209.hp1 HG03453.hp2 HG03486.hp2 HG03492.hp1 HG03516.hp2 HG03669.hp1 HG03688.hp1 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG04115.hp2 HG04184.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp2 NA18612.hp1 NA18747.hp1 NA18747.hp2 NA18942.hp1 NA18944.hp2 NA18948.hp2 NA18950.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18956.hp2 NA18960.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp2 NA18974.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18986.hp1 NA18986.hp2 NA18991.hp1 NA18991.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19011.hp1 NA19012.hp2 NA19056.hp2 NA19060.hp2 NA19062.hp1 NA19064.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19081.hp2 NA19084.hp1 NA19085.hp1 NA19085.hp2 NA19088.hp1 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0006	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0006c0007	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0002c0002t0002 a0003c0003t0001 a0006c0007t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 others(35): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0009 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0034 a0001c0001t0001g0038 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0093 a0001c0001t0001g0096 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0125 a0001c0001t0003g0112 a0001c0001t0006g0108 a0002c0002t0002g0002 a0002c0002t0002g0005 a0002c0002t0002g0010 a0002c0002t0002g0019 a0002c0002t0002g0022 a0002c0002t0002g0037 a0002c0002t0002g0076 a0002c0002t0002g0092 a0002c0002t0002g0099 a0003c0003t0001g0039 a0003c0003t0001g0085 a0003c0003t0001g0100 a0003c0003t0001g0114 a0006c0007t0001g0074	139	400	0.3475	2	c.-50 others(13): Show c.-5060_-5059insAA	TSPO	ENSG00000100300.18	transcript	ENST00000337554.8	protein_coding		4984		chr22	TogoVar
TSPO_chr22_43146559_43168242	43147225	C C	CAA CAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00423.hp1 others(67): Show HG00099.hp1 HG00140.hp2 HG00423.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00673.hp1 HG00673.hp2 HG00733.hp2 HG00741.hp1 HG00741.hp2 HG01106.hp2 HG01192.hp1 HG01192.hp2 HG01255.hp1 HG01346.hp1 HG01496.hp1 HG01943.hp1 HG02015.hp1 HG02027.hp2 HG02083.hp2 HG02148.hp1 HG02257.hp1 HG02300.hp2 HG02523.hp2 HG02559.hp2 HG02602.hp1 HG02683.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG03017.hp1 HG03209.hp2 HG03239.hp1 HG03453.hp2 HG03490.hp1 HG03516.hp2 HG03688.hp2 HG03927.hp1 HG04115.hp1 HG04184.hp2 NA18747.hp2 NA18939.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18945.hp1 NA18948.hp1 NA18950.hp1 NA18956.hp1 NA18960.hp1 NA18967.hp2 NA18974.hp2 NA18977.hp1 NA18981.hp1 NA18986.hp1 NA18990.hp1 NA18990.hp2 NA18991.hp2 NA18995.hp1 NA18999.hp1 NA19002.hp1 NA19004.hp1 NA19062.hp2 NA19064.hp2 NA19079.hp2 NA19084.hp2 NA20752.hp1 NA20805.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0002c0002t0002 a0002c0002t0004 others(2): Show a0001c0001t0001 a0002c0002t0002 a0002c0002t0004 a0002c0002t0005 a0003c0003t0001	a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0014 others(19): Show a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0014 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0032 a0001c0001t0001g0109 a0002c0002t0002g0002 a0002c0002t0002g0010 a0002c0002t0002g0019 a0002c0002t0002g0020 a0002c0002t0002g0022 a0002c0002t0002g0029 a0002c0002t0002g0081 a0002c0002t0002g0082 a0002c0002t0002g0083 a0002c0002t0002g0107 a0002c0002t0004g0002 a0002c0002t0005g0002 a0003c0003t0001g0012 a0003c0003t0001g0085 a0003c0003t0001g0100	70	400	0.1750	2	c.-44 others(13): Show c.-4409_-4408insAA	TSPO	ENSG00000100300.18	transcript	ENST00000337554.8	protein_coding		4333		chr22	TogoVar
TSPO_chr22_43146559_43168242	43149860	A A	ATT ATT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00280.hp2 others(123): Show HG00099.hp2 HG00140.hp2 HG00280.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00741.hp1 HG01167.hp2 HG01168.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01346.hp1 HG01496.hp1 HG01496.hp2 HG01891.hp1 HG01943.hp1 HG02015.hp1 HG02027.hp2 HG02055.hp1 HG02083.hp2 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp2 HG02300.hp2 HG02451.hp1 HG02523.hp2 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02683.hp1 HG02735.hp2 HG02886.hp1 HG02896.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03098.hp1 HG03195.hp2 HG03209.hp2 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03516.hp1 HG03516.hp2 HG03579.hp2 HG03669.hp1 HG03688.hp2 HG03927.hp1 HG04115.hp2 HG04184.hp2 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp2 NA18522.hp2 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18948.hp1 NA18950.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18967.hp1 NA18967.hp2 NA18972.hp1 NA18974.hp2 NA18977.hp1 NA18978.hp1 NA18981.hp1 NA18986.hp1 NA18988.hp1 NA18990.hp1 NA18990.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18999.hp1 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19004.hp1 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp2 NA19056.hp1 NA19060.hp1 NA19062.hp2 NA19064.hp1 NA19064.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19083.hp2 NA19089.hp2 NA19090.hp2 NA20752.hp1 NA20805.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0004 a0002c0002 others(2): Show a0001c0001 a0001c0004 a0002c0002 a0003c0003 a0004c0005	a0001c0001t0001 a0001c0001t0003 a0001c0004t0001 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0004t0001 a0002c0002t0001 a0002c0002t0002 a0002c0002t0004 a0002c0002t0005 a0003c0003t0001 a0004c0005t0002	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 others(46): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0015 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0025 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0052 a0001c0001t0001g0080 a0001c0001t0001g0090 a0001c0001t0001g0109 a0001c0001t0001g0125 a0001c0001t0003g0017 a0001c0001t0003g0043 a0001c0001t0003g0058 a0001c0001t0003g0123 a0001c0001t0003g0124 a0001c0004t0001g0015 a0002c0002t0001g0060 a0002c0002t0002g0002 a0002c0002t0002g0010 a0002c0002t0002g0019 a0002c0002t0002g0020 a0002c0002t0002g0021 a0002c0002t0002g0022 a0002c0002t0002g0037 a0002c0002t0002g0075 a0002c0002t0002g0079 a0002c0002t0002g0081 a0002c0002t0002g0082 a0002c0002t0002g0083 a0002c0002t0002g0084 a0002c0002t0002g0087 a0002c0002t0002g0092 a0002c0002t0002g0099 a0002c0002t0002g0101 a0002c0002t0004g0002 a0002c0002t0005g0002 a0003c0003t0001g0012 a0003c0003t0001g0033 a0003c0003t0001g0085 a0003c0003t0001g0091 a0003c0003t0001g0100 a0004c0005t0002g0086	126	400	0.3150	2	c.-17 others(13): Show c.-1774_-1773insTT	TSPO	ENSG00000100300.18	transcript	ENST00000337554.8	protein_coding		1698		chr22	TogoVar
TSPO_chr22_43146559_43168242	43164303	A A	AAC AAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01256.hp2 HG01884.hp2 HG02056.hp2 others(9): Show HG01256.hp2 HG01884.hp2 HG02056.hp2 HG02559.hp2 HG02809.hp1 HG03098.hp2 HG03195.hp1 HG03942.hp2 NA18522.hp1 NA19006.hp1 NA19087.hp2 NA20300.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0005 a0006	a0001c0001 a0002c0002 a0003c0003 others(2): Show a0001c0001 a0002c0002 a0003c0003 a0005c0006 a0006c0007	a0001c0001t0001 a0002c0002t0002 a0003c0003t0001 others(2): Show a0001c0001t0001 a0002c0002t0002 a0003c0003t0001 a0005c0006t0002 a0006c0007t0001	a0001c0001t0001g0001 a0002c0002t0002g0098 a0003c0003t0001g0004 others(5): Show a0001c0001t0001g0001 a0002c0002t0002g0098 a0003c0003t0001g0004 a0003c0003t0001g0045 a0003c0003t0001g0085 a0003c0003t0001g0114 a0005c0006t0002g0044 a0006c0007t0001g0074	12	400	0.0300	2	c.13 others(13): Show c.1312_*1313insAC	TSPO	ENSG00000100300.18	transcript	ENST00000337554.8	protein_coding		1062		chr22	TogoVar
TSPO_chr22_43146559_43168242	43165890	C C	CCT CCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02895.hp1 HG02897.hp2 HG03471.hp1 HG02895.hp1 HG02897.hp2 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	3	400	0.0075	2	c.28 others(13): Show c.2899_*2900insCT	TSPO	ENSG00000100300.18	transcript	ENST00000337554.8	protein_coding		2649		chr22	TogoVar
TSPO_chr22_43146559_43168242	43165890	C C	CTT CTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(145): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01167.hp2 HG01168.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp2 HG01934.hp1 HG01943.hp1 HG01978.hp1 HG02004.hp1 HG02083.hp2 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02293.hp1 HG02293.hp2 HG02300.hp2 HG02486.hp1 HG02559.hp1 HG02602.hp1 HG02683.hp1 HG02698.hp1 HG02717.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp2 HG02818.hp2 HG02886.hp2 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03490.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp2 HG03831.hp1 HG03927.hp1 HG04115.hp1 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp2 HG06807.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18948.hp1 NA18950.hp1 NA18960.hp1 NA18967.hp1 NA18972.hp1 NA18978.hp2 NA18981.hp1 NA18986.hp1 NA18990.hp2 NA19002.hp1 NA19006.hp2 NA19011.hp2 NA19012.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19060.hp1 NA19062.hp1 NA19064.hp1 NA19064.hp2 NA19068.hp2 NA19070.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19083.hp2 NA19084.hp2 NA19087.hp1 NA20129.hp1 NA20752.hp1 NA20805.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 others(3): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 a0002c0002t0002 a0002c0002t0004 a0002c0002t0005	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(51): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0001t0001g0018 a0001c0001t0001g0025 a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0035 a0001c0001t0001g0053 a0001c0001t0001g0059 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0090 a0001c0001t0001g0096 a0001c0001t0001g0125 a0001c0001t0002g0007 a0001c0001t0002g0026 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0002c0002t0001g0060 a0002c0002t0002g0002 a0002c0002t0002g0010 a0002c0002t0002g0019 a0002c0002t0002g0020 a0002c0002t0002g0022 a0002c0002t0002g0025 a0002c0002t0002g0029 a0002c0002t0002g0037 a0002c0002t0002g0073 a0002c0002t0002g0075 a0002c0002t0002g0076 a0002c0002t0002g0081 a0002c0002t0002g0082 a0002c0002t0002g0084 a0002c0002t0002g0087 a0002c0002t0002g0092 a0002c0002t0002g0099 a0002c0002t0002g0101 a0002c0002t0002g0107 a0002c0002t0004g0002 a0002c0002t0005g0002	148	400	0.3700	2	c.28 others(13): Show c.2899_*2900insTT	TSPO	ENSG00000100300.18	transcript	ENST00000337554.8	protein_coding		2649		chr22	TogoVar
TSPY1_chrY_9461955_9474749	9462140	G G	GTT GTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01358.hp2 HG01515.hp1 HG01358.hp2 HG01515.hp1	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0002 a0003c0002t0002	a0003c0002t0002g0002 a0003c0002t0002g0002	2	23	0.0870	2	c.-48 others(13): Show c.-4861_-4860insTT	TSPY1	ENSG00000258992.7	transcript	ENST00000451548.6	protein_coding		4814		chrY	TogoVar
TSPY1_chrY_9461955_9474749	9462637	C C	CAG CAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01069.hp2 HG01106.hp2 HG02698.hp1 others(8): Show HG01069.hp2 HG01106.hp2 HG02698.hp1 HG02965.hp2 HG03471.hp1 HG03654.hp1 NA18612.hp2 NA18953.hp1 NA18960.hp2 NA18982.hp1 NA20805.hp2	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0006 a0007	a0001c0001 a0001c0004 a0002c0003 others(3): Show a0001c0001 a0001c0004 a0002c0003 a0004c0007 a0006c0009 a0007c0006	a0001c0001t0001 a0001c0001t0002 a0001c0004t0002 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0004t0002 a0002c0003t0001 a0004c0007t0001 a0006c0009t0004 a0007c0006t0005	a0001c0001t0001g0001 a0001c0001t0001g0012 a0001c0001t0002g0001 others(6): Show a0001c0001t0001g0001 a0001c0001t0001g0012 a0001c0001t0002g0001 a0001c0004t0002g0006 a0002c0003t0001g0001 a0002c0003t0001g0003 a0004c0007t0001g0005 a0006c0009t0004g0004 a0007c0006t0005g0010	11	23	0.4783	2	c.-43 others(13): Show c.-4364_-4363insAG	TSPY1	ENSG00000258992.7	transcript	ENST00000451548.6	protein_coding		4317		chrY	TogoVar
TSPY1_chrY_9461955_9474749	9463376	C C	CAG CAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04228.hp1 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	23	0.0435	2	c.-36 others(13): Show c.-3625_-3624insAG	TSPY1	ENSG00000258992.7	transcript	ENST00000451548.6	protein_coding		3578		chrY	TogoVar
TSPY1_chrY_9461955_9474749	9463838	C C	CCT CCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01358.hp2 HG01515.hp1 NA20752.hp2 HG01358.hp2 HG01515.hp1 NA20752.hp2	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0002 a0003c0002t0002	a0003c0002t0002g0002 a0003c0002t0002g0002	3	23	0.1304	2	c.-31 others(13): Show c.-3163_-3162insCT	TSPY1	ENSG00000258992.7	transcript	ENST00000451548.6	protein_coding		3116		chrY	TogoVar
TSPY1_chrY_9461955_9474749	9464164	G G	GGA GGA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18960.hp2 NA18960.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	23	0.0435	2	c.-28 others(13): Show c.-2837_-2836insGA	TSPY1	ENSG00000258992.7	transcript	ENST00000451548.6	protein_coding		2790		chrY	TogoVar
TSPY1_chrY_9461955_9474749	9466069	C C	CCT CCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04115.hp2 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	23	0.0435	2	c.-93 others(11): Show c.-932_-931insCT	TSPY1	ENSG00000258992.7	transcript	ENST00000451548.6	protein_coding		885		chrY	TogoVar
TSPY1_chrY_9461955_9474749	9466071	C C	CGG CGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01069.hp2 HG01106.hp2 HG01358.hp2 others(20): Show HG01069.hp2 HG01106.hp2 HG01358.hp2 HG01515.hp1 HG02602.hp1 HG02647.hp2 HG02698.hp1 HG02738.hp1 HG02965.hp2 HG03471.hp1 HG03654.hp1 HG03688.hp2 HG04115.hp2 HG04228.hp1 NA18612.hp2 NA18953.hp1 NA18955.hp1 NA18960.hp2 NA18982.hp1 NA19007.hp2 NA19058.hp1 NA20752.hp2 NA20805.hp2	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008	a0001c0001 a0001c0004 a0001c0008 others(8): Show a0001c0001 a0001c0004 a0001c0008 a0002c0003 a0002c0011 a0003c0002 a0004c0007 a0005c0005 a0006c0009 a0007c0006 a0008c0010	a0001c0001t0001 a0001c0001t0002 a0001c0004t0002 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0004t0002 a0001c0004t0003 a0001c0008t0001 a0002c0003t0001 a0002c0011t0002 a0003c0002t0002 a0004c0007t0001 a0005c0005t0001 a0006c0009t0004 a0007c0006t0005 a0008c0010t0002	a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0012 others(13): Show a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0002g0001 a0001c0004t0002g0006 a0001c0004t0003g0008 a0001c0008t0001g0009 a0002c0003t0001g0001 a0002c0003t0001g0003 a0002c0011t0002g0007 a0003c0002t0002g0002 a0004c0007t0001g0005 a0005c0005t0001g0001 a0006c0009t0004g0004 a0007c0006t0005g0010 a0008c0010t0002g0013	23	23	1.0000	2	c.-93 others(11): Show c.-930_-929insGG	TSPY1	ENSG00000258992.7	transcript	ENST00000451548.6	protein_coding		883		chrY	TogoVar
TSPY1_chrY_9461955_9474749	9468993	C C	CAG CAG	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01106.hp2 HG01358.hp2 others(18): Show HG01069.hp2 HG01106.hp2 HG01358.hp2 HG01515.hp1 HG02602.hp1 HG02647.hp2 HG02698.hp1 HG02738.hp1 HG02965.hp2 HG03471.hp1 HG03654.hp1 HG03688.hp2 HG04115.hp2 HG04228.hp1 NA18612.hp2 NA18953.hp1 NA18955.hp1 NA18960.hp2 NA18982.hp1 NA20752.hp2 NA20805.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007	a0001c0001 a0001c0004 a0001c0008 others(6): Show a0001c0001 a0001c0004 a0001c0008 a0002c0003 a0003c0002 a0004c0007 a0005c0005 a0006c0009 a0007c0006	a0001c0001t0001 a0001c0001t0002 a0001c0004t0002 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0004t0002 a0001c0004t0003 a0001c0008t0001 a0002c0003t0001 a0003c0002t0002 a0004c0007t0001 a0005c0005t0001 a0006c0009t0004 a0007c0006t0005	a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0012 others(11): Show a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0002g0001 a0001c0004t0002g0006 a0001c0004t0003g0008 a0001c0008t0001g0009 a0002c0003t0001g0001 a0002c0003t0001g0003 a0003c0002t0002g0002 a0004c0007t0001g0005 a0005c0005t0001g0001 a0006c0009t0004g0004 a0007c0006t0005g0010	21	23	0.9130	2	c.904 others(17): Show c.904+150_904+151dupAG	TSPY1	ENSG00000258992.7	transcript	ENST00000451548.6	protein_coding	5/5		INFO_REALIGN_3_PRIME	chrY	TogoVar
TSPY1_chrY_9461955_9474749	9469467	G G	GCC GCC	intron_variant intron_variant	MODIFIER	NA18953.hp1 NA18953.hp1	a0006 a0006	a0006c0009 a0006c0009	a0006c0009t0004 a0006c0009t0004	a0006c0009t0004g0004 a0006c0009t0004g0004	1	23	0.0435	2	c.905 others(15): Show c.905-69_905-68dupCC	TSPY1	ENSG00000258992.7	transcript	ENST00000451548.6	protein_coding	5/5		INFO_REALIGN_3_PRIME	chrY	TogoVar
TSPY1_chrY_9461955_9474749	9472930	C C	CAT CAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02738.hp1 HG03654.hp1 HG04115.hp2 HG02738.hp1 HG03654.hp1 HG04115.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0001 a0001c0001t0001g0011 a0002c0003t0001g0001 a0001c0001t0001g0001 a0001c0001t0001g0011 a0002c0003t0001g0001	3	23	0.1304	2	c.33 others(13): Show c.3369_*3370insAT	TSPY1	ENSG00000258992.7	transcript	ENST00000451548.6	protein_coding		3182		chrY	TogoVar
TSPY1_chrY_9461955_9474749	9472973	A A	AAG AAG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18982.hp1 NA18982.hp1	a0007 a0007	a0007c0006 a0007c0006	a0007c0006t0005 a0007c0006t0005	a0007c0006t0005g0010 a0007c0006t0005g0010	1	23	0.0435	2	c.34 others(13): Show c.3412_*3413insAG	TSPY1	ENSG00000258992.7	transcript	ENST00000451548.6	protein_coding		3225		chrY	TogoVar
TSPY2_chrY_6241223_6254018	6245841	C C	CCT CCT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19076.hp1 NA19076.hp1	a0004 a0004	a0004c0003 a0004c0003	a0004c0003t0001 a0004c0003t0001	a0004c0003t0001g0005 a0004c0003t0001g0005	1	108	0.0093	2	c.-42 others(11): Show c.-428_-427insCT	TSPY2	ENSG00000168757.13	transcript	ENST00000320701.9	protein_coding		381		chrY	TogoVar
TSPY2_chrY_6241223_6254018	6249029	C C	CTG CTG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19089.hp1 NA19089.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	108	0.0093	2	c.20 others(11): Show c.204_*205insTG	TSPY2	ENSG00000168757.13	transcript	ENST00000320701.9	protein_coding		12		chrY	TogoVar
TSPY2_chrY_6241223_6254018	6249055	T T	TTG TTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02027.hp1 HG02132.hp1 HG03688.hp2 others(3): Show HG02027.hp1 HG02132.hp1 HG03688.hp2 HG04199.hp1 NA18971.hp1 NA19006.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 a0001c0001t0001 a0001c0001t0002 a0002c0002t0001	a0001c0001t0001g0001 a0001c0001t0002g0003 a0002c0002t0001g0001 a0001c0001t0001g0001 a0001c0001t0002g0003 a0002c0002t0001g0001	6	108	0.0556	2	c.23 others(11): Show c.230_*231insTG	TSPY2	ENSG00000168757.13	transcript	ENST00000320701.9	protein_coding		38		chrY	TogoVar
TSPY2_chrY_6241223_6254018	6252193	C C	CAT CAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01074.hp1 HG01109.hp1 HG02074.hp1 others(8): Show HG01074.hp1 HG01109.hp1 HG02074.hp1 HG02129.hp1 HG02135.hp1 HG02647.hp1 HG02698.hp1 HG03017.hp1 HG03688.hp2 HG04199.hp1 HG04204.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0002c0002t0001 a0001c0001t0001 a0001c0001t0003 a0002c0002t0001	a0001c0001t0001g0001 a0001c0001t0003g0001 a0002c0002t0001g0001 a0001c0001t0001g0001 a0001c0001t0003g0001 a0002c0002t0001g0001	11	108	0.1019	2	c.33 others(13): Show c.3368_*3369insAT	TSPY2	ENSG00000168757.13	transcript	ENST00000320701.9	protein_coding		3176		chrY	TogoVar
TSPY4_chrY_9332464_9345278	9339592	G G	GGT GGT	intron_variant intron_variant	MODIFIER	NA18983.hp1 NA18983.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0002 a0002c0001t0002	a0002c0001t0002g0001 a0002c0001t0002g0001	1	3	0.3333	2	c.922 others(17): Show c.922+220_922+221insTG	TSPY4	ENSG00000233803.9	transcript	ENST00000426950.6	protein_coding	5/5		INFO_REALIGN_3_PRIME	chrY	TogoVar
TSPY4_chrY_9332464_9345278	9340294	C C	CTG CTG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18985.hp1 NA18985.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0003 a0003c0003t0001g0003	1	3	0.3333	2	c.20 others(11): Show c.204_*205insTG	TSPY4	ENSG00000233803.9	transcript	ENST00000426950.6	protein_coding		17		chrY	TogoVar
TSPY4_chrY_9332464_9345278	9340515	G G	GGT GGT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18983.hp1 NA18983.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0002 a0002c0001t0002	a0002c0001t0002g0001 a0002c0001t0002g0001	1	3	0.3333	2	c.42 others(11): Show c.425_*426insGT	TSPY4	ENSG00000233803.9	transcript	ENST00000426950.6	protein_coding		238		chrY	TogoVar
TSPY4_chrY_9332464_9345278	9343463	C C	CAT CAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18983.hp1 NA18983.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0002 a0002c0001t0002	a0002c0001t0002g0001 a0002c0001t0002g0001	1	3	0.3333	2	c.33 others(13): Show c.3373_*3374insAT	TSPY4	ENSG00000233803.9	transcript	ENST00000426950.6	protein_coding		3186		chrY	TogoVar
TSPYL1_chr6_116269858_116284930	116275798	C C	CAA CAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00280.hp1 HG00544.hp2 HG00642.hp2 others(42): Show HG00280.hp1 HG00544.hp2 HG00642.hp2 HG00738.hp1 HG01106.hp1 HG01123.hp1 HG02074.hp1 HG02132.hp1 HG02451.hp1 HG02559.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02683.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp2 HG03516.hp2 HG03927.hp1 HG04115.hp2 HG04184.hp2 HG04228.hp1 NA18961.hp1 NA18964.hp1 NA18971.hp1 NA18978.hp2 NA18990.hp1 NA19030.hp1 NA19043.hp1 NA19068.hp1 NA20300.hp1 NA21309.hp1	a0002 a0003 a0008 a0002 a0003 a0008	a0002c0002 a0002c0004 a0003c0003 others(1): Show a0002c0002 a0002c0004 a0003c0003 a0008c0011	a0002c0002t0039 a0002c0004t0005 a0002c0004t0009 others(7): Show a0002c0002t0039 a0002c0004t0005 a0002c0004t0009 a0002c0004t0016 a0002c0004t0024 a0002c0004t0029 a0003c0003t0013 a0003c0003t0047 a0003c0003t0053 a0008c0011t0034	a0002c0002t0039g0000 a0002c0004t0005g0000 a0002c0004t0009g0000 others(7): Show a0002c0002t0039g0000 a0002c0004t0005g0000 a0002c0004t0009g0000 a0002c0004t0016g0000 a0002c0004t0024g0000 a0002c0004t0029g0000 a0003c0003t0013g0000 a0003c0003t0047g0000 a0003c0003t0053g0000 a0008c0011t0034g0000	45	416	0.1082	2	c.27 others(13): Show c.2717_*2718dupTT	TSPYL1	ENSG00000189241.8	transcript	ENST00000368608.4	protein_coding	1/1	2718		chr6	TogoVar
TSPYL1_chr6_116269858_116284930	116282616	A A	AAT AAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp1 HG02809.hp1 HG03130.hp2 HG02145.hp1 HG02809.hp1 HG03130.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0032 a0003c0003t0058 a0003c0003t0032 a0003c0003t0058	a0003c0003t0032g0000 a0003c0003t0058g0000 a0003c0003t0032g0000 a0003c0003t0058g0000	3	416	0.0072	2	c.-27 others(13): Show c.-2788_-2787dupAT	TSPYL1	ENSG00000189241.8	transcript	ENST00000368608.4	protein_coding		2687		chr6	TogoVar
TSPYL2_chrX_53077367_53093540	53077923	A A	ACG ACG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0024 a0001c0001t0001g0024	1	258	0.0039	2	c.-45 others(13): Show c.-4576_-4575insCG	TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding		4443		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53078018	G G	GTC GTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp1 NA19058.hp1 HG00558.hp1 NA19058.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0001 a0001c0001t0001g0003	2	258	0.0078	2	c.-44 others(13): Show c.-4481_-4480insTC	TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding		4348		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53078200	T T	TTG TTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	258	0.0039	2	c.-42 others(13): Show c.-4299_-4298insTG	TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding		4166		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53078986	C C	CCA CCA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18940.hp1 NA18940.hp1	a0009 a0009	a0009c0007 a0009c0007	a0009c0007t0015 a0009c0007t0015	a0009c0007t0015g0023 a0009c0007t0015g0023	1	258	0.0039	2	c.-35 others(13): Show c.-3513_-3512insCA	TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding		3380		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53079433	G G	GGT GGT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18940.hp1 NA18940.hp1	a0009 a0009	a0009c0007 a0009c0007	a0009c0007t0015 a0009c0007t0015	a0009c0007t0015g0023 a0009c0007t0015g0023	1	258	0.0039	2	c.-30 others(13): Show c.-3066_-3065insGT	TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding		2933		chrX	TogoVar
TSPYL2_chrX_53077367_53093540	53079455	G G	GGT GGT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18940.hp1 NA18940.hp1	a0009 a0009	a0009c0007 a0009c0007	a0009c0007t0015 a0009c0007t0015	a0009c0007t0015g0023 a0009c0007t0015g0023	1	258	0.0039	2	c.-30 others(13): Show c.-3044_-3043insGT	TSPYL2	ENSG00000184205.14	transcript	ENST00000375442.8	protein_coding		2911		chrX	TogoVar

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