view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TSPEAR_chr21_44492893_44716572 | 44594822 | A | ATT | intron_variant | MODIFIER | HG00544.hp1 HG00642.hp2 HG01074.hp2 others(14): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(3): Show | a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0051 others(14): Show |
17 | 294 | 0.0578 | 2 | c.83- others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44602039 | C | CTG | intron_variant | MODIFIER | HG00423.hp1 HG00544.hp2 HG00621.hp2 others(73): Show |
a0001a0008a0009others(1): Show | a0001c0001a0001c0008a0001c0010others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0008 others(73): Show |
76 | 294 | 0.2585 | 2 | c.83- others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44615549 | G | GTT | intron_variant | MODIFIER | HG00642.hp2 HG04184.hp2 NA18747.hp2 others(9): Show |
a0001a0013 | a0001c0001a0013c0005 | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(2): Show | a0001c0001t0001g0057 a0001c0001t0001g0138 a0001c0001t0001g0151 others(9): Show |
12 | 294 | 0.0408 | 2 | c.83- others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44631081 | G | GAA | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00323.hp2 others(161): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0002a0001c0004others(10): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(24): Show | a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0018 others(161): Show |
164 | 294 | 0.5578 | 2 | c.83- others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44635345 | C | CAA | intron_variant | MODIFIER | HG02451.hp2 HG02486.hp2 HG03579.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004 | a0001c0001t0001g0024 a0001c0001t0001g0138 a0001c0001t0001g0142 others(3): Show |
6 | 294 | 0.0204 | 2 | c.83- others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44646124 | C | CAA | intron_variant | MODIFIER | HG00280.hp2 HG00423.hp1 HG00597.hp1 others(16): Show |
a0001a0003a0013 | a0001c0001a0001c0002a0001c0015others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0008others(3): Show | a0001c0001t0001g0049 a0001c0001t0001g0060 a0001c0001t0001g0065 others(16): Show |
19 | 294 | 0.0646 | 2 | c.82+ others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44673905 | C | CAA | intron_variant | MODIFIER | HG00099.hp2 HG01074.hp1 HG02257.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(1): Show | a0001c0001t0001g0086 a0001c0001t0001g0093 a0001c0001t0001g0222 others(3): Show |
6 | 294 | 0.0204 | 2 | c.82+ others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44674118 | C | CAA | intron_variant | MODIFIER | HG01257.hp1 HG01258.hp1 HG01891.hp1 others(25): Show |
a0001a0004a0007 | a0001c0001a0001c0008a0004c0006others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(6): Show | a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0007 others(25): Show |
28 | 294 | 0.0952 | 2 | c.82+ others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44674731 | A | AGT | intron_variant | MODIFIER | HG01106.hp2 HG01167.hp1 HG01358.hp2 others(10): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0011a0001c0001t0016others(1): Show | a0001c0001t0001g0082 a0001c0001t0001g0171 a0001c0001t0001g0174 others(10): Show |
13 | 294 | 0.0442 | 2 | c.82+ others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44689712 | A | AAT | intron_variant | MODIFIER | HG00323.hp1 HG01074.hp1 HG01168.hp2 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0023 a0001c0001t0001g0063 a0001c0001t0001g0086 others(11): Show |
14 | 294 | 0.0476 | 2 | c.82+ others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44699377 | C | CAA | intron_variant | MODIFIER | HG01123.hp2 HG01175.hp2 HG01192.hp1 others(13): Show |
a0001a0004a0007 | a0001c0001a0001c0002a0004c0006others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 others(13): Show |
16 | 294 | 0.0544 | 2 | c.82+ others(19): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44704249 | A | ACC | intron_variant | MODIFIER | HG00423.hp1 HG00438.hp1 HG00597.hp1 others(18): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0018others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(5): Show | a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0105 others(18): Show |
21 | 294 | 0.0714 | 2 | c.82+ others(17): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44707302 | T | TGG | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00323.hp1 others(39): Show |
a0001a0002 | a0001c0001a0001c0004a0001c0008others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0016 a0001c0001t0001g0020 a0001c0001t0001g0063 others(39): Show |
42 | 294 | 0.1429 | 2 | c.82+ others(17): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44708007 | G | GCA | intron_variant | MODIFIER | HG01934.hp1 HG02040.hp1 HG02257.hp2 others(18): Show |
a0001a0007a0012 | a0001c0001a0001c0008a0007c0009others(1): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0007others(5): Show | a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0011 others(18): Show |
21 | 294 | 0.0714 | 2 | c.82+ others(17): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPEAR_chr21_44492893_44716572 | 44710595 | C | CAG | intron_variant | MODIFIER | HG02145.hp2 HG02572.hp2 HG02723.hp2 others(7): Show |
a0001a0007 | a0001c0001a0001c0008a0007c0009 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(3): Show | a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0008 others(7): Show |
10 | 294 | 0.0340 | 2 | c.82+ others(15): Show |
TSPEAR | ENSG00000175894.18 | transcript | ENST00000323084.9 | protein_coding | 1/11 | chr21 | TogoVar | |||||||
TSPOAP1_chr17_58296231_58333795 | 58330048 | G | GAT | upstream_gene_variant | MODIFIER | HG01106.hp2 HG01109.hp2 HG01243.hp1 others(5): Show |
a0006a0010a0029 | a0006c0008a0010c0020a0029c0085 | a0006c0008t0004a0006c0008t0007a0010c0020t0009others(1): Show | a0006c0008t0004g0011 a0006c0008t0007g0022 a0010c0020t0009g0052 others(1): Show |
8 | 342 | 0.0234 | 2 | c.-21 others(13): Show |
TSPOAP1 | ENSG00000005379.17 | transcript | ENST00000343736.9 | protein_coding | 1254 | chr17 | TogoVar | |||||||
TSPOAP1_chr17_58296231_58333795 | 58330156 | T | TTA | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00323.hp1 HG00423.hp1 others(113): Show |
a0001a0002a0003others(24): Show | a0001c0001a0001c0042a0001c0043others(28): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0017others(30): Show | a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0007 others(65): Show |
116 | 342 | 0.3392 | 2 | c.-22 others(13): Show |
TSPOAP1 | ENSG00000005379.17 | transcript | ENST00000343736.9 | protein_coding | 1362 | chr17 | TogoVar | |||||||
TSPO_chr22_43146559_43168242 | 43146574 | C | CAA | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00408.hp1 others(136): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0003others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(3): Show | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 others(35): Show |
139 | 400 | 0.3475 | 2 | c.-50 others(13): Show |
TSPO | ENSG00000100300.18 | transcript | ENST00000337554.8 | protein_coding | 4984 | chr22 | TogoVar | |||||||
TSPO_chr22_43146559_43168242 | 43147225 | C | CAA | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00423.hp1 others(67): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0001a0002c0002t0002a0002c0002t0004others(2): Show | a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0014 others(19): Show |
70 | 400 | 0.1750 | 2 | c.-44 others(13): Show |
TSPO | ENSG00000100300.18 | transcript | ENST00000337554.8 | protein_coding | 4333 | chr22 | TogoVar | |||||||
TSPO_chr22_43146559_43168242 | 43149860 | A | ATT | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp2 others(123): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0004a0002c0002others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0004t0001others(6): Show | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 others(46): Show |
126 | 400 | 0.3150 | 2 | c.-17 others(13): Show |
TSPO | ENSG00000100300.18 | transcript | ENST00000337554.8 | protein_coding | 1698 | chr22 | TogoVar | |||||||
TSPO_chr22_43146559_43168242 | 43164303 | A | AAC | downstream_gene_variant | MODIFIER | HG01256.hp2 HG01884.hp2 HG02056.hp2 others(9): Show |
a0001a0002a0003others(2): Show | a0001c0001a0002c0002a0003c0003others(2): Show | a0001c0001t0001a0002c0002t0002a0003c0003t0001others(2): Show | a0001c0001t0001g0001 a0002c0002t0002g0098 a0003c0003t0001g0004 others(5): Show |
12 | 400 | 0.0300 | 2 | c.*13 others(13): Show |
TSPO | ENSG00000100300.18 | transcript | ENST00000337554.8 | protein_coding | 1062 | chr22 | TogoVar | |||||||
TSPO_chr22_43146559_43168242 | 43165890 | C | CCT | downstream_gene_variant | MODIFIER | HG02895.hp1 HG02897.hp2 HG03471.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003 | 3 | 400 | 0.0075 | 2 | c.*28 others(13): Show |
TSPO | ENSG00000100300.18 | transcript | ENST00000337554.8 | protein_coding | 2649 | chr22 | TogoVar | |||||||
TSPO_chr22_43146559_43168242 | 43165890 | C | CTT | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(145): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(3): Show | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(51): Show |
148 | 400 | 0.3700 | 2 | c.*28 others(13): Show |
TSPO | ENSG00000100300.18 | transcript | ENST00000337554.8 | protein_coding | 2649 | chr22 | TogoVar | |||||||
TSPY1_chrY_9461955_9474749 | 9462140 | G | GTT | upstream_gene_variant | MODIFIER | HG01358.hp2 HG01515.hp1 |
a0003 | a0003c0002 | a0003c0002t0002 | a0003c0002t0002g0002 | 2 | 23 | 0.0870 | 2 | c.-48 others(13): Show |
TSPY1 | ENSG00000258992.7 | transcript | ENST00000451548.6 | protein_coding | 4814 | chrY | TogoVar | |||||||
TSPY1_chrY_9461955_9474749 | 9462637 | C | CAG | upstream_gene_variant | MODIFIER | HG01069.hp2 HG01106.hp2 HG02698.hp1 others(8): Show |
a0001a0002a0004others(2): Show | a0001c0001a0001c0004a0002c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0004t0002others(4): Show | a0001c0001t0001g0001 a0001c0001t0001g0012 a0001c0001t0002g0001 others(6): Show |
11 | 23 | 0.4783 | 2 | c.-43 others(13): Show |
TSPY1 | ENSG00000258992.7 | transcript | ENST00000451548.6 | protein_coding | 4317 | chrY | TogoVar | |||||||
TSPY1_chrY_9461955_9474749 | 9463376 | C | CAG | upstream_gene_variant | MODIFIER | HG04228.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 23 | 0.0435 | 2 | c.-36 others(13): Show |
TSPY1 | ENSG00000258992.7 | transcript | ENST00000451548.6 | protein_coding | 3578 | chrY | TogoVar | |||||||
TSPY1_chrY_9461955_9474749 | 9463838 | C | CCT | upstream_gene_variant | MODIFIER | HG01358.hp2 HG01515.hp1 NA20752.hp2 |
a0003 | a0003c0002 | a0003c0002t0002 | a0003c0002t0002g0002 | 3 | 23 | 0.1304 | 2 | c.-31 others(13): Show |
TSPY1 | ENSG00000258992.7 | transcript | ENST00000451548.6 | protein_coding | 3116 | chrY | TogoVar | |||||||
TSPY1_chrY_9461955_9474749 | 9464164 | G | GGA | upstream_gene_variant | MODIFIER | NA18960.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 23 | 0.0435 | 2 | c.-28 others(13): Show |
TSPY1 | ENSG00000258992.7 | transcript | ENST00000451548.6 | protein_coding | 2790 | chrY | TogoVar | |||||||
TSPY1_chrY_9461955_9474749 | 9466069 | C | CCT | upstream_gene_variant | MODIFIER | HG04115.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0011 | 1 | 23 | 0.0435 | 2 | c.-93 others(11): Show |
TSPY1 | ENSG00000258992.7 | transcript | ENST00000451548.6 | protein_coding | 885 | chrY | TogoVar | |||||||
TSPY1_chrY_9461955_9474749 | 9466071 | C | CGG | upstream_gene_variant | MODIFIER | HG01069.hp2 HG01106.hp2 HG01358.hp2 others(20): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0004a0001c0008others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0004t0002others(10): Show | a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0012 others(13): Show |
23 | 23 | 1.0000 | 2 | c.-93 others(11): Show |
TSPY1 | ENSG00000258992.7 | transcript | ENST00000451548.6 | protein_coding | 883 | chrY | TogoVar | |||||||
TSPY1_chrY_9461955_9474749 | 9468993 | C | CAG | intron_variant | MODIFIER | HG01069.hp2 HG01106.hp2 HG01358.hp2 others(18): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0004a0001c0008others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0004t0002others(8): Show | a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0012 others(11): Show |
21 | 23 | 0.9130 | 2 | c.904 others(17): Show |
TSPY1 | ENSG00000258992.7 | transcript | ENST00000451548.6 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chrY | TogoVar | ||||||
TSPY1_chrY_9461955_9474749 | 9469467 | G | GCC | intron_variant | MODIFIER | NA18953.hp1 | a0006 | a0006c0009 | a0006c0009t0004 | a0006c0009t0004g0004 | 1 | 23 | 0.0435 | 2 | c.905 others(15): Show |
TSPY1 | ENSG00000258992.7 | transcript | ENST00000451548.6 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chrY | TogoVar | ||||||
TSPY1_chrY_9461955_9474749 | 9472930 | C | CAT | downstream_gene_variant | MODIFIER | HG02738.hp1 HG03654.hp1 HG04115.hp2 |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0002c0003t0001 | a0001c0001t0001g0001 a0001c0001t0001g0011 a0002c0003t0001g0001 |
3 | 23 | 0.1304 | 2 | c.*33 others(13): Show |
TSPY1 | ENSG00000258992.7 | transcript | ENST00000451548.6 | protein_coding | 3182 | chrY | TogoVar | |||||||
TSPY1_chrY_9461955_9474749 | 9472973 | A | AAG | downstream_gene_variant | MODIFIER | NA18982.hp1 | a0007 | a0007c0006 | a0007c0006t0005 | a0007c0006t0005g0010 | 1 | 23 | 0.0435 | 2 | c.*34 others(13): Show |
TSPY1 | ENSG00000258992.7 | transcript | ENST00000451548.6 | protein_coding | 3225 | chrY | TogoVar | |||||||
TSPY2_chrY_6241223_6254018 | 6245841 | C | CCT | upstream_gene_variant | MODIFIER | NA19076.hp1 | a0004 | a0004c0003 | a0004c0003t0001 | a0004c0003t0001g0005 | 1 | 108 | 0.0093 | 2 | c.-42 others(11): Show |
TSPY2 | ENSG00000168757.13 | transcript | ENST00000320701.9 | protein_coding | 381 | chrY | TogoVar | |||||||
TSPY2_chrY_6241223_6254018 | 6249029 | C | CTG | downstream_gene_variant | MODIFIER | NA19089.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 108 | 0.0093 | 2 | c.*20 others(11): Show |
TSPY2 | ENSG00000168757.13 | transcript | ENST00000320701.9 | protein_coding | 12 | chrY | TogoVar | |||||||
TSPY2_chrY_6241223_6254018 | 6249055 | T | TTG | downstream_gene_variant | MODIFIER | HG02027.hp1 HG02132.hp1 HG03688.hp2 others(3): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0002c0002t0001 | a0001c0001t0001g0001 a0001c0001t0002g0003 a0002c0002t0001g0001 |
6 | 108 | 0.0556 | 2 | c.*23 others(11): Show |
TSPY2 | ENSG00000168757.13 | transcript | ENST00000320701.9 | protein_coding | 38 | chrY | TogoVar | |||||||
TSPY2_chrY_6241223_6254018 | 6252193 | C | CAT | downstream_gene_variant | MODIFIER | HG01074.hp1 HG01109.hp1 HG02074.hp1 others(8): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0003a0002c0002t0001 | a0001c0001t0001g0001 a0001c0001t0003g0001 a0002c0002t0001g0001 |
11 | 108 | 0.1019 | 2 | c.*33 others(13): Show |
TSPY2 | ENSG00000168757.13 | transcript | ENST00000320701.9 | protein_coding | 3176 | chrY | TogoVar | |||||||
TSPY4_chrY_9332464_9345278 | 9339592 | G | GGT | intron_variant | MODIFIER | NA18983.hp1 | a0002 | a0002c0001 | a0002c0001t0002 | a0002c0001t0002g0001 | 1 | 3 | 0.3333 | 2 | c.922 others(17): Show |
TSPY4 | ENSG00000233803.9 | transcript | ENST00000426950.6 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chrY | TogoVar | ||||||
TSPY4_chrY_9332464_9345278 | 9340294 | C | CTG | downstream_gene_variant | MODIFIER | NA18985.hp1 | a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0003 | 1 | 3 | 0.3333 | 2 | c.*20 others(11): Show |
TSPY4 | ENSG00000233803.9 | transcript | ENST00000426950.6 | protein_coding | 17 | chrY | TogoVar | |||||||
TSPY4_chrY_9332464_9345278 | 9340515 | G | GGT | downstream_gene_variant | MODIFIER | NA18983.hp1 | a0002 | a0002c0001 | a0002c0001t0002 | a0002c0001t0002g0001 | 1 | 3 | 0.3333 | 2 | c.*42 others(11): Show |
TSPY4 | ENSG00000233803.9 | transcript | ENST00000426950.6 | protein_coding | 238 | chrY | TogoVar | |||||||
TSPY4_chrY_9332464_9345278 | 9343463 | C | CAT | downstream_gene_variant | MODIFIER | NA18983.hp1 | a0002 | a0002c0001 | a0002c0001t0002 | a0002c0001t0002g0001 | 1 | 3 | 0.3333 | 2 | c.*33 others(13): Show |
TSPY4 | ENSG00000233803.9 | transcript | ENST00000426950.6 | protein_coding | 3186 | chrY | TogoVar | |||||||
TSPYL1_chr6_116269858_116284930 | 116275798 | C | CAA | 3_prime_UTR_variant | MODIFIER | HG00280.hp1 HG00544.hp2 HG00642.hp2 others(42): Show |
a0002a0003a0008 | a0002c0002a0002c0004a0003c0003others(1): Show | a0002c0002t0039a0002c0004t0005a0002c0004t0009others(7): Show | a0002c0002t0039g0000 a0002c0004t0005g0000 a0002c0004t0009g0000 others(7): Show |
45 | 416 | 0.1082 | 2 | c.*27 others(13): Show |
TSPYL1 | ENSG00000189241.8 | transcript | ENST00000368608.4 | protein_coding | 1/1 | 2718 | chr6 | TogoVar | ||||||
TSPYL1_chr6_116269858_116284930 | 116282616 | A | AAT | upstream_gene_variant | MODIFIER | HG02145.hp1 HG02809.hp1 HG03130.hp2 |
a0003 | a0003c0003 | a0003c0003t0032a0003c0003t0058 | a0003c0003t0032g0000 a0003c0003t0058g0000 |
3 | 416 | 0.0072 | 2 | c.-27 others(13): Show |
TSPYL1 | ENSG00000189241.8 | transcript | ENST00000368608.4 | protein_coding | 2687 | chr6 | TogoVar | |||||||
TSPYL2_chrX_53077367_53093540 | 53077923 | A | ACG | upstream_gene_variant | MODIFIER | HG03688.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0024 | 1 | 258 | 0.0039 | 2 | c.-45 others(13): Show |
TSPYL2 | ENSG00000184205.14 | transcript | ENST00000375442.8 | protein_coding | 4443 | chrX | TogoVar | |||||||
TSPYL2_chrX_53077367_53093540 | 53078018 | G | GTC | upstream_gene_variant | MODIFIER | HG00558.hp1 NA19058.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0003 |
2 | 258 | 0.0078 | 2 | c.-44 others(13): Show |
TSPYL2 | ENSG00000184205.14 | transcript | ENST00000375442.8 | protein_coding | 4348 | chrX | TogoVar | |||||||
TSPYL2_chrX_53077367_53093540 | 53078200 | T | TTG | upstream_gene_variant | MODIFIER | HG02109.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 258 | 0.0039 | 2 | c.-42 others(13): Show |
TSPYL2 | ENSG00000184205.14 | transcript | ENST00000375442.8 | protein_coding | 4166 | chrX | TogoVar | |||||||
TSPYL2_chrX_53077367_53093540 | 53078986 | C | CCA | upstream_gene_variant | MODIFIER | NA18940.hp1 | a0009 | a0009c0007 | a0009c0007t0015 | a0009c0007t0015g0023 | 1 | 258 | 0.0039 | 2 | c.-35 others(13): Show |
TSPYL2 | ENSG00000184205.14 | transcript | ENST00000375442.8 | protein_coding | 3380 | chrX | TogoVar | |||||||
TSPYL2_chrX_53077367_53093540 | 53079433 | G | GGT | upstream_gene_variant | MODIFIER | NA18940.hp1 | a0009 | a0009c0007 | a0009c0007t0015 | a0009c0007t0015g0023 | 1 | 258 | 0.0039 | 2 | c.-30 others(13): Show |
TSPYL2 | ENSG00000184205.14 | transcript | ENST00000375442.8 | protein_coding | 2933 | chrX | TogoVar | |||||||
TSPYL2_chrX_53077367_53093540 | 53079455 | G | GGT | upstream_gene_variant | MODIFIER | NA18940.hp1 | a0009 | a0009c0007 | a0009c0007t0015 | a0009c0007t0015g0023 | 1 | 258 | 0.0039 | 2 | c.-30 others(13): Show |
TSPYL2 | ENSG00000184205.14 | transcript | ENST00000375442.8 | protein_coding | 2911 | chrX | TogoVar |