view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
COBL_chr7_51011212_51321809 | 51061950 | T | TACACACA others(13): Show |
intron_variant | MODIFIER | HG02970.hp2 HG03041.hp1 HG03139.hp1 others(1): Show |
a0002 | a0002c0004a0002c0015 | a0002c0004t0006a0002c0004t0007a0002c0015t0006 | a0002c0004t0006g0003 a0002c0004t0006g0081 a0002c0004t0007g0045 others(1): Show |
4 | 230 | 0.0174 | 20 | c.109 others(41): Show |
COBL | ENSG00000106078.19 | transcript | ENST00000265136.12 | protein_coding | 7/12 | chr7 | TogoVar | |||||||
COBL_chr7_51011212_51321809 | 51070392 | A | AACACACA others(13): Show |
intron_variant | MODIFIER | HG00639.hp2 HG01074.hp1 HG01081.hp1 others(3): Show |
a0001a0002a0005 | a0001c0003a0002c0004a0005c0011 | a0001c0003t0001a0001c0003t0003a0002c0004t0001others(1): Show | a0001c0003t0001g0091 a0001c0003t0001g0092 a0001c0003t0001g0100 others(3): Show |
6 | 230 | 0.0261 | 20 | c.109 others(41): Show |
COBL | ENSG00000106078.19 | transcript | ENST00000265136.12 | protein_coding | 7/12 | chr7 | TogoVar | |||||||
COBL_chr7_51011212_51321809 | 51098224 | C | CTTTTTTT others(13): Show |
intron_variant | MODIFIER | HG02055.hp2 HG02976.hp1 |
a0001 | a0001c0003a0001c0008 | a0001c0003t0001a0001c0008t0004 | a0001c0003t0001g0047 a0001c0008t0004g0106 |
2 | 230 | 0.0087 | 20 | c.958 others(39): Show |
COBL | ENSG00000106078.19 | transcript | ENST00000265136.12 | protein_coding | 6/12 | chr7 | TogoVar | |||||||
COBL_chr7_51011212_51321809 | 51108917 | G | GACACACA others(13): Show |
intron_variant | MODIFIER | HG02723.hp1 | a0001 | a0001c0027 | a0001c0027t0009 | a0001c0027t0009g0165 | 1 | 230 | 0.0044 | 20 | c.958 others(39): Show |
COBL | ENSG00000106078.19 | transcript | ENST00000265136.12 | protein_coding | 6/12 | chr7 | TogoVar | |||||||
COBL_chr7_51011212_51321809 | 51226522 | T | TTGAGTGA others(13): Show |
intron_variant | MODIFIER | HG01884.hp1 HG02280.hp1 HG02451.hp2 others(7): Show |
a0001a0002a0003others(2): Show | a0001c0003a0001c0010a0001c0049others(4): Show | a0001c0003t0001a0001c0010t0007a0001c0049t0001others(5): Show | a0001c0003t0001g0047 a0001c0010t0007g0011 a0001c0049t0001g0046 others(7): Show |
10 | 230 | 0.0435 | 20 | c.42- others(35): Show |
COBL | ENSG00000106078.19 | transcript | ENST00000265136.12 | protein_coding | 1/12 | chr7 | TogoVar | |||||||
COCH_chr14_30869559_30895618 | 30895053 | C | CAAAAAAA others(13): Show |
downstream_gene_variant | MODIFIER | NA18978.hp1 NA19005.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0021 a0001c0001t0002g0257 |
2 | 478 | 0.0042 | 20 | c.*52 others(31): Show |
COCH | ENSG00000100473.18 | transcript | ENST00000396618.9 | protein_coding | 4436 | chr14 | TogoVar | |||||||
COG1_chr17_73188055_73213507 | 73190196 | A | AACACACA others(13): Show |
upstream_gene_variant | MODIFIER | HG02055.hp2 HG02896.hp2 |
a0002 | a0002c0001 | a0002c0001t0001 | a0002c0001t0001g0105 a0002c0001t0001g0106 |
2 | 428 | 0.0047 | 20 | c.-28 others(31): Show |
COG1 | ENSG00000166685.13 | transcript | ENST00000299886.9 | protein_coding | 2858 | chr17 | TogoVar | |||||||
COG1_chr17_73188055_73213507 | 73190196 | A | AACACACA others(13): Show |
upstream_gene_variant | MODIFIER | HG02145.hp2 HG02622.hp1 HG02976.hp1 |
a0001a0002 | a0001c0004a0002c0001 | a0001c0004t0001a0002c0001t0001 | a0001c0004t0001g0125 a0001c0004t0001g0126 a0002c0001t0001g0027 |
3 | 428 | 0.0070 | 20 | c.-28 others(31): Show |
COG1 | ENSG00000166685.13 | transcript | ENST00000299886.9 | protein_coding | 2858 | chr17 | TogoVar | |||||||
COG3_chr13_45459939_45541701 | 45508068 | T | TAAAAAAA others(13): Show |
intron_variant | MODIFIER | HG02895.hp2 HG02897.hp1 |
a0003 | a0003c0006 | a0003c0006t0004 | a0003c0006t0004g0195 a0003c0006t0004g0196 |
2 | 342 | 0.0059 | 20 | c.159 others(39): Show |
COG3 | ENSG00000136152.15 | transcript | ENST00000349995.10 | protein_coding | 14/22 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
COG3_chr13_45459939_45541701 | 45513449 | A | ATATATAT others(13): Show |
intron_variant | MODIFIER | NA18522.hp2 | a0002 | a0002c0005 | a0002c0005t0011 | a0002c0005t0011g0150 | 1 | 342 | 0.0029 | 20 | c.180 others(39): Show |
COG3 | ENSG00000136152.15 | transcript | ENST00000349995.10 | protein_coding | 16/22 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
COG4_chr16_70475571_70528554 | 70495397 | C | CAAAAAAA others(13): Show |
intron_variant | MODIFIER | HG02886.hp2 HG02922.hp2 NA18906.hp1 |
a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0015 a0001c0003t0001g0022 a0001c0003t0001g0023 |
3 | 354 | 0.0085 | 20 | c.164 others(37): Show |
COG4 | ENSG00000103051.21 | transcript | ENST00000323786.10 | protein_coding | 12/18 | chr16 | TogoVar | |||||||
COG6_chr13_39650662_39757628 | 39651677 | C | CTTTTTTT others(13): Show |
upstream_gene_variant | MODIFIER | HG02809.hp2 NA18747.hp2 NA18981.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0007 a0001c0001t0003g0032 a0001c0001t0003g0033 |
3 | 370 | 0.0081 | 20 | c.-40 others(31): Show |
COG6 | ENSG00000133103.17 | transcript | ENST00000455146.8 | protein_coding | 3984 | chr13 | TogoVar | |||||||
COG6_chr13_39650662_39757628 | 39706255 | T | TTATATAT others(13): Show |
intron_variant | MODIFIER | HG02486.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0093 | 1 | 370 | 0.0027 | 20 | c.128 others(39): Show |
COG6 | ENSG00000133103.17 | transcript | ENST00000455146.8 | protein_coding | 13/18 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
COG6_chr13_39650662_39757628 | 39730773 | C | CAAAAAAA others(13): Show |
intron_variant | MODIFIER | HG00621.hp2 HG03239.hp1 NA18979.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0013 | a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0103 others(6): Show |
9 | 370 | 0.0243 | 20 | c.182 others(39): Show |
COG6 | ENSG00000133103.17 | transcript | ENST00000455146.8 | protein_coding | 18/18 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
COG7_chr16_23383493_23458189 | 23409088 | T | TGTGTGTG others(13): Show |
intron_variant | MODIFIER | HG01099.hp2 HG03942.hp2 |
a0002 | a0002c0002 | a0002c0002t0003 | a0002c0002t0003g0114 a0002c0002t0003g0121 |
2 | 272 | 0.0074 | 20 | c.147 others(39): Show |
COG7 | ENSG00000168434.13 | transcript | ENST00000307149.10 | protein_coding | 11/16 | chr16 | TogoVar | |||||||
COG7_chr16_23383493_23458189 | 23409088 | T | TGTGTGTG others(13): Show |
intron_variant | MODIFIER | HG00423.hp2 HG03130.hp2 NA18990.hp2 others(1): Show |
a0002 | a0002c0002 | a0002c0002t0003 | a0002c0002t0003g0111 a0002c0002t0003g0119 a0002c0002t0003g0127 others(1): Show |
4 | 272 | 0.0147 | 20 | c.147 others(39): Show |
COG7 | ENSG00000168434.13 | transcript | ENST00000307149.10 | protein_coding | 11/16 | chr16 | TogoVar | |||||||
COG7_chr16_23383493_23458189 | 23409088 | T | TGTGTGTG others(13): Show |
intron_variant | MODIFIER | HG00735.hp1 NA18980.hp1 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0021 a0001c0001t0002g0034 |
2 | 272 | 0.0074 | 20 | c.147 others(39): Show |
COG7 | ENSG00000168434.13 | transcript | ENST00000307149.10 | protein_coding | 11/16 | chr16 | TogoVar | |||||||
COG7_chr16_23383493_23458189 | 23449380 | T | TTAAAATA others(13): Show |
intron_variant | MODIFIER | HG02280.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0025 | 1 | 272 | 0.0037 | 20 | c.169 others(37): Show |
COG7 | ENSG00000168434.13 | transcript | ENST00000307149.10 | protein_coding | 1/16 | chr16 | TogoVar | |||||||
COL11A1_chr1_102871473_103113522 | 102878475 | C | CATATATA others(13): Show |
intron_variant | MODIFIER | HG00738.hp2 HG01071.hp2 HG01081.hp1 others(14): Show |
a0001a0002a0003others(3): Show | a0001c0002a0001c0016a0002c0001others(6): Show | a0001c0002t0008a0001c0016t0001a0002c0001t0001others(7): Show | a0001c0002t0008g0027 a0001c0016t0001g0050 a0002c0001t0001g0117 others(14): Show |
17 | 184 | 0.0924 | 20 | c.527 others(37): Show |
COL11A1 | ENSG00000060718.22 | transcript | ENST00000370096.9 | protein_coding | 66/66 | chr1 | TogoVar | |||||||
COL11A1_chr1_102871473_103113522 | 102889383 | C | CTGTGTGT others(13): Show |
intron_variant | MODIFIER | HG02630.hp1 HG03225.hp2 |
a0001 | a0001c0002a0001c0031 | a0001c0002t0003a0001c0031t0001 | a0001c0002t0003g0048 a0001c0031t0001g0172 |
2 | 184 | 0.0109 | 20 | c.446 others(35): Show |
COL11A1 | ENSG00000060718.22 | transcript | ENST00000370096.9 | protein_coding | 59/66 | chr1 | TogoVar | |||||||
COL11A1_chr1_102871473_103113522 | 103006178 | A | AAAATAAA others(13): Show |
intron_variant | MODIFIER | HG00323.hp1 | a0002 | a0002c0001 | a0002c0001t0001 | a0002c0001t0001g0152 | 1 | 184 | 0.0054 | 20 | c.173 others(35): Show |
COL11A1 | ENSG00000060718.22 | transcript | ENST00000370096.9 | protein_coding | 16/66 | chr1 | TogoVar | |||||||
COL11A1_chr1_102871473_103113522 | 103111839 | A | AGATAGAT others(13): Show |
upstream_gene_variant | MODIFIER | NA18955.hp2 | a0007 | a0007c0015 | a0007c0015t0005 | a0007c0015t0005g0112 | 1 | 184 | 0.0054 | 20 | c.-36 others(31): Show |
COL11A1 | ENSG00000060718.22 | transcript | ENST00000370096.9 | protein_coding | 3318 | chr1 | TogoVar | |||||||
COL12A1_chr6_75079326_75211053 | 75208150 | C | CTCTCTCT others(13): Show |
upstream_gene_variant | MODIFIER | HG03209.hp1 | a0006 | a0006c0007 | a0006c0007t0006 | a0006c0007t0006g0039 | 1 | 206 | 0.0049 | 20 | c.-24 others(31): Show |
COL12A1 | ENSG00000111799.22 | transcript | ENST00000322507.13 | protein_coding | 2098 | chr6 | TogoVar | |||||||
COL12A1_chr6_75079326_75211053 | 75208152 | C | CTCTCTCT others(13): Show |
upstream_gene_variant | MODIFIER | HG02895.hp1 | a0010 | a0010c0009 | a0010c0009t0002 | a0010c0009t0002g0003 | 1 | 206 | 0.0049 | 20 | c.-24 others(31): Show |
COL12A1 | ENSG00000111799.22 | transcript | ENST00000322507.13 | protein_coding | 2100 | chr6 | TogoVar | |||||||
COL12A1_chr6_75079326_75211053 | 75208154 | C | CTCTCTCT others(13): Show |
upstream_gene_variant | MODIFIER | HG06807.hp2 | a0001 | a0001c0022 | a0001c0022t0001 | a0001c0022t0001g0136 | 1 | 206 | 0.0049 | 20 | c.-24 others(31): Show |
COL12A1 | ENSG00000111799.22 | transcript | ENST00000322507.13 | protein_coding | 2102 | chr6 | TogoVar | |||||||
COL12A1_chr6_75079326_75211053 | 75208158 | C | CTCTCTCT others(13): Show |
upstream_gene_variant | MODIFIER | HG02615.hp2 HG03195.hp1 NA21309.hp2 |
a0001a0005a0017 | a0001c0037a0005c0016a0017c0038 | a0001c0037t0003a0005c0016t0006a0017c0038t0005 | a0001c0037t0003g0101 a0005c0016t0006g0028 a0017c0038t0005g0149 |
3 | 206 | 0.0146 | 20 | c.-24 others(31): Show |
COL12A1 | ENSG00000111799.22 | transcript | ENST00000322507.13 | protein_coding | 2106 | chr6 | TogoVar | |||||||
COL12A1_chr6_75079326_75211053 | 75208160 | C | CTCTCTCT others(13): Show |
upstream_gene_variant | MODIFIER | HG00438.hp2 NA18948.hp2 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0018 a0002c0002t0001g0080 |
2 | 206 | 0.0097 | 20 | c.-24 others(31): Show |
COL12A1 | ENSG00000111799.22 | transcript | ENST00000322507.13 | protein_coding | 2108 | chr6 | TogoVar | |||||||
COL12A1_chr6_75079326_75211053 | 75208162 | C | CTCTCTCT others(13): Show |
upstream_gene_variant | MODIFIER | HG02071.hp2 HG02895.hp2 NA18962.hp2 others(1): Show |
a0001a0002a0012 | a0001c0001a0001c0043a0002c0002others(1): Show | a0001c0001t0002a0001c0043t0007a0002c0002t0001others(1): Show | a0001c0001t0002g0091 a0001c0043t0007g0146 a0002c0002t0001g0008 others(1): Show |
4 | 206 | 0.0194 | 20 | c.-24 others(31): Show |
COL12A1 | ENSG00000111799.22 | transcript | ENST00000322507.13 | protein_coding | 2110 | chr6 | TogoVar | |||||||
COL12A1_chr6_75079326_75211053 | 75208164 | C | CTCTCTCT others(13): Show |
upstream_gene_variant | MODIFIER | HG04199.hp2 | a0002 | a0002c0006 | a0002c0006t0002 | a0002c0006t0002g0066 | 1 | 206 | 0.0049 | 20 | c.-24 others(31): Show |
COL12A1 | ENSG00000111799.22 | transcript | ENST00000322507.13 | protein_coding | 2112 | chr6 | TogoVar | |||||||
COL12A1_chr6_75079326_75211053 | 75208168 | C | CTCTCTCT others(13): Show |
upstream_gene_variant | MODIFIER | NA19064.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0061 | 1 | 206 | 0.0049 | 20 | c.-24 others(31): Show |
COL12A1 | ENSG00000111799.22 | transcript | ENST00000322507.13 | protein_coding | 2116 | chr6 | TogoVar | |||||||
COL13A1_chr10_69796906_69964144 | 69810376 | G | GAGAGAGA others(13): Show |
intron_variant | MODIFIER | HG01891.hp1 HG02145.hp2 HG02622.hp2 others(5): Show |
a0001a0002 | a0001c0002a0001c0007a0002c0005 | a0001c0002t0001a0001c0002t0009a0001c0007t0001others(1): Show | a0001c0002t0001g0211 a0001c0002t0001g0212 a0001c0002t0001g0213 others(5): Show |
8 | 324 | 0.0247 | 20 | c.294 others(37): Show |
COL13A1 | ENSG00000197467.17 | transcript | ENST00000645393.2 | protein_coding | 1/40 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
COL13A1_chr10_69796906_69964144 | 69814017 | A | AGACATCT others(13): Show |
intron_variant | MODIFIER | NA18946.hp1 | a0001 | a0001c0004 | a0001c0004t0003 | a0001c0004t0003g0237 | 1 | 324 | 0.0031 | 20 | c.295 others(37): Show |
COL13A1 | ENSG00000197467.17 | transcript | ENST00000645393.2 | protein_coding | 1/40 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
COL13A1_chr10_69796906_69964144 | 69933135 | C | CAAAAAAA others(13): Show |
intron_variant | MODIFIER | HG01167.hp2 HG01358.hp2 HG03688.hp1 others(1): Show |
a0001a0010 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0001a0001c0002t0001a0001c0004t0002others(1): Show | a0001c0001t0001g0201 a0001c0002t0001g0324 a0001c0004t0002g0173 others(1): Show |
4 | 324 | 0.0124 | 20 | c.172 others(37): Show |
COL13A1 | ENSG00000197467.17 | transcript | ENST00000645393.2 | protein_coding | 31/40 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
COL13A1_chr10_69796906_69964144 | 69950004 | G | GTGTGTGT others(13): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00558.hp2 HG01255.hp2 others(10): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0003others(2): Show | a0001c0001t0001g0003 a0001c0001t0001g0014 a0001c0001t0001g0031 others(10): Show |
13 | 324 | 0.0401 | 20 | c.205 others(39): Show |
COL13A1 | ENSG00000197467.17 | transcript | ENST00000645393.2 | protein_coding | 38/40 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
COL14A1_chr8_120120102_120378573 | 120173564 | C | CATCTATC others(13): Show |
intron_variant | MODIFIER | HG00639.hp2 HG01071.hp1 HG01169.hp2 others(10): Show |
a0001a0005 | a0001c0001a0001c0003a0001c0013others(1): Show | a0001c0001t0001a0001c0003t0001a0001c0003t0002others(2): Show | a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0063 others(10): Show |
13 | 218 | 0.0596 | 20 | c.436 others(37): Show |
COL14A1 | ENSG00000187955.13 | transcript | ENST00000297848.8 | protein_coding | 5/47 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
COL14A1_chr8_120120102_120378573 | 120184224 | G | GATTTATT others(13): Show |
intron_variant | MODIFIER | HG02165.hp1 | a0006 | a0006c0018 | a0006c0018t0002 | a0006c0018t0002g0136 | 1 | 218 | 0.0046 | 20 | c.437 others(39): Show |
COL14A1 | ENSG00000187955.13 | transcript | ENST00000297848.8 | protein_coding | 5/47 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
COL14A1_chr8_120120102_120378573 | 120202989 | A | AATATATA others(13): Show |
intron_variant | MODIFIER | HG01975.hp2 HG02523.hp1 |
a0002a0006 | a0002c0002a0006c0018 | a0002c0002t0001a0006c0018t0001 | a0002c0002t0001g0177 a0006c0018t0001g0171 |
2 | 218 | 0.0092 | 20 | c.878 others(35): Show |
COL14A1 | ENSG00000187955.13 | transcript | ENST00000297848.8 | protein_coding | 8/47 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
COL14A1_chr8_120120102_120378573 | 120229089 | T | TTTTTATT others(13): Show |
intron_variant | MODIFIER | HG01884.hp1 HG01943.hp2 HG02071.hp2 others(6): Show |
a0001a0002a0003others(1): Show | a0001c0003a0002c0002a0002c0037others(2): Show | a0001c0003t0001a0001c0003t0002a0001c0003t0003others(5): Show | a0001c0003t0001g0057 a0001c0003t0001g0128 a0001c0003t0002g0003 others(6): Show |
9 | 218 | 0.0413 | 20 | c.219 others(37): Show |
COL14A1 | ENSG00000187955.13 | transcript | ENST00000297848.8 | protein_coding | 18/47 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
COL15A1_chr9_98938907_99075787 | 98950550 | C | CCCTTCCT others(13): Show |
intron_variant | MODIFIER | HG03041.hp1 HG06807.hp2 NA18968.hp1 others(1): Show |
a0001a0013a0047 | a0001c0001a0001c0013a0013c0017others(1): Show | a0001c0001t0002a0001c0013t0001a0013c0017t0001others(1): Show | a0001c0001t0002g0167 a0001c0013t0001g0068 a0013c0017t0001g0071 others(1): Show |
4 | 310 | 0.0129 | 20 | c.100 others(37): Show |
COL15A1 | ENSG00000204291.12 | transcript | ENST00000375001.8 | protein_coding | 2/41 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
COL15A1_chr9_98938907_99075787 | 98950590 | T | TCCTTCCT others(13): Show |
intron_variant | MODIFIER | HG01928.hp2 HG02155.hp2 HG02735.hp2 others(3): Show |
a0001a0002a0004others(2): Show | a0001c0013a0002c0002a0002c0010others(3): Show | a0001c0013t0001a0002c0002t0001a0002c0010t0001others(3): Show | a0001c0013t0001g0046 a0002c0002t0001g0043 a0002c0010t0001g0021 others(3): Show |
6 | 310 | 0.0194 | 20 | c.100 others(37): Show |
COL15A1 | ENSG00000204291.12 | transcript | ENST00000375001.8 | protein_coding | 2/41 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
COL15A1_chr9_98938907_99075787 | 98950590 | T | TCCTTCCT others(13): Show |
intron_variant | MODIFIER | HG02622.hp1 HG02622.hp2 HG03195.hp2 others(1): Show |
a0001a0002a0006others(1): Show | a0001c0001a0002c0003a0006c0007others(1): Show | a0001c0001t0002a0002c0003t0002a0006c0007t0001others(1): Show | a0001c0001t0002g0219 a0002c0003t0002g0224 a0006c0007t0001g0225 others(1): Show |
4 | 310 | 0.0129 | 20 | c.100 others(37): Show |
COL15A1 | ENSG00000204291.12 | transcript | ENST00000375001.8 | protein_coding | 2/41 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
COL15A1_chr9_98938907_99075787 | 99024268 | G | GTTTTTTT others(13): Show |
intron_variant | MODIFIER | HG00733.hp2 HG01123.hp2 HG02602.hp1 others(9): Show |
a0001a0002a0016others(1): Show | a0001c0001a0001c0013a0002c0002others(3): Show | a0001c0001t0002a0001c0013t0001a0002c0002t0001others(4): Show | a0001c0001t0002g0059 a0001c0013t0001g0242 a0002c0002t0001g0018 others(9): Show |
12 | 310 | 0.0387 | 20 | c.185 others(37): Show |
COL15A1 | ENSG00000204291.12 | transcript | ENST00000375001.8 | protein_coding | 14/41 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
COL15A1_chr9_98938907_99075787 | 99066599 | G | GTTTTTTT others(13): Show |
intron_variant | MODIFIER | HG01993.hp2 NA18945.hp1 |
a0005 | a0005c0015 | a0005c0015t0001 | a0005c0015t0001g0040 a0005c0015t0001g0163 |
2 | 310 | 0.0065 | 20 | c.365 others(37): Show |
COL15A1 | ENSG00000204291.12 | transcript | ENST00000375001.8 | protein_coding | 39/41 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
COL15A1_chr9_98938907_99075787 | 99066599 | G | GTTTTTTT others(13): Show |
intron_variant | MODIFIER | HG03239.hp2 HG03710.hp2 HG03834.hp2 others(4): Show |
a0001a0002a0007 | a0001c0013a0002c0002a0007c0036 | a0001c0013t0001a0002c0002t0001a0007c0036t0001 | a0001c0013t0001g0064 a0001c0013t0001g0242 a0002c0002t0001g0043 others(4): Show |
7 | 310 | 0.0226 | 20 | c.365 others(37): Show |
COL15A1 | ENSG00000204291.12 | transcript | ENST00000375001.8 | protein_coding | 39/41 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
COL16A1_chr1_31647263_31709017 | 31707338 | C | CCTTTTCT others(13): Show |
upstream_gene_variant | MODIFIER | HG00323.hp2 HG00438.hp2 HG01123.hp2 others(24): Show |
a0001a0003a0005others(2): Show | a0001c0001a0001c0003a0001c0015others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0002others(5): Show | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0019 others(18): Show |
27 | 342 | 0.0790 | 20 | c.-35 others(31): Show |
COL16A1 | ENSG00000084636.18 | transcript | ENST00000373672.8 | protein_coding | 3322 | chr1 | TogoVar | |||||||
COL18A1_chr21_45400165_45518720 | 45500565 | T | TGGGGTGT others(13): Show |
intron_variant | MODIFIER | HG01070.hp2 HG01074.hp2 HG03041.hp1 others(3): Show |
a0002a0009a0012others(1): Show | a0002c0018a0002c0019a0009c0024others(2): Show | a0002c0018t0001a0002c0019t0002a0009c0024t0001others(2): Show | a0002c0018t0001g0011 a0002c0019t0002g0148 a0002c0019t0002g0186 others(3): Show |
6 | 292 | 0.0206 | 20 | c.268 others(39): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 32/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45506752 | T | TCCCACCT others(13): Show |
intron_variant | MODIFIER | HG02559.hp1 HG02630.hp1 |
a0011 | a0011c0037 | a0011c0037t0009 | a0011c0037t0009g0197 a0011c0037t0009g0198 |
2 | 292 | 0.0069 | 20 | c.321 others(37): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 37/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL19A1_chr6_69861556_70217468 | 69921395 | C | CATATATA others(13): Show |
intron_variant | MODIFIER | HG02886.hp1 HG02895.hp2 HG02897.hp2 others(1): Show |
a0003a0009 | a0003c0010a0009c0023 | a0003c0010t0013a0003c0010t0027a0009c0023t0001 | a0003c0010t0013g0172 a0003c0010t0013g0173 a0003c0010t0027g0119 others(1): Show |
4 | 182 | 0.0220 | 20 | c.267 others(37): Show |
COL19A1 | ENSG00000082293.13 | transcript | ENST00000620364.5 | protein_coding | 4/50 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
COL21A1_chr6_56051590_56252580 | 56129675 | C | CGTGTGTG others(13): Show |
intron_variant | MODIFIER | HG03491.hp2 NA19063.hp1 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0009 | a0001c0001t0005g0178 a0001c0001t0009g0031 |
2 | 264 | 0.0076 | 20 | c.154 others(39): Show |
COL21A1 | ENSG00000124749.18 | transcript | ENST00000244728.10 | protein_coding | 12/29 | chr6 | TogoVar | |||||||
COL21A1_chr6_56051590_56252580 | 56148338 | C | CAGAGAGA others(13): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00544.hp1 HG01106.hp1 others(14): Show |
a0001a0003a0009 | a0001c0001a0003c0007a0009c0018 | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(2): Show | a0001c0001t0001g0118 a0001c0001t0001g0175 a0001c0001t0001g0208 others(14): Show |
17 | 264 | 0.0644 | 20 | c.143 others(39): Show |
COL21A1 | ENSG00000124749.18 | transcript | ENST00000244728.10 | protein_coding | 10/29 | chr6 | TogoVar |