Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CSNKA2IP_chr3_88333456_88472594	88418463	T T	TGTGTGTG others(13): Show TGTGTGTGTGTGTGTGCGCGC	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02896.hp2 HG02897.hp1 HG02809.hp2 HG02896.hp2 HG02897.hp1	a0002 a0004 a0002 a0004	a0002c0006 a0004c0005 a0002c0006 a0004c0005	a0002c0006t0001 a0004c0005t0001 a0002c0006t0001 a0004c0005t0001	a0002c0006t0001g0246 a0004c0005t0001g0245 a0004c0005t0001g0247 a0002c0006t0001g0246 a0004c0005t0001g0245 a0004c0005t0001g0247	3	386	0.0078	20	c.-27 others(41): Show c.-270-46624_-270-46623insTGTGTGTGTGTGTGCGCGCG	CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
CSNKA2IP_chr3_88333456_88472594	88445275	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01099.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0002 a0001c0004t0002	a0001c0004t0002g0326 a0001c0004t0002g0326	1	386	0.0026	20	c.-27 others(41): Show c.-270-19807_-270-19788dupAAAAAAAAAAAAAAAAAAAA	CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
CSNKA2IP_chr3_88333456_88472594	88445976	C C	CTCTCTCT others(13): Show CTCTCTCTCTCTCTCTTTCTT	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0002 a0002	a0002c0011 a0002c0011	a0002c0011t0001 a0002c0011t0001	a0002c0011t0001g0005 a0002c0011t0001g0005	1	386	0.0026	20	c.-27 others(41): Show c.-270-19109_-270-19108insCTCTCTCTCTCTTTCTTTCT	CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
CSNKA2IP_chr3_88333456_88472594	88449820	G G	GACACACA others(13): Show GACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA19078.hp1 NA19078.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0036 a0002c0002t0001g0036	1	386	0.0026	20	c.-27 others(41): Show c.-270-15252_-270-15233dupCACACACACACACACACACA	CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
CSNKA2IP_chr3_88333456_88472594	88449874	T T	TATATAGA others(13): Show TATATAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0001 a0002c0006t0001	a0002c0006t0001g0003 a0002c0006t0001g0003	1	386	0.0026	20	c.-27 others(41): Show c.-270-15213_-270-15212insTATAGAGAGAGAGAGAGAGA	CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
CSNKA2IP_chr3_88333456_88472594	88457695	C C	CAAAATAA others(13): Show CAAAATAAAATAAAATAAAAT	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG02055.hp1 HG02280.hp2 others(3): Show HG00323.hp2 HG02055.hp1 HG02280.hp2 HG02572.hp2 HG03225.hp1 NA21309.hp2	a0002 a0003 a0004 a0002 a0003 a0004	a0002c0002 a0003c0003 a0004c0005 a0002c0002 a0003c0003 a0004c0005	a0002c0002t0001 a0003c0003t0001 a0004c0005t0001 others(1): Show a0002c0002t0001 a0003c0003t0001 a0004c0005t0001 a0004c0005t0002	a0002c0002t0001g0009 a0003c0003t0001g0146 a0003c0003t0001g0147 others(3): Show a0002c0002t0001g0009 a0003c0003t0001g0146 a0003c0003t0001g0147 a0003c0003t0001g0149 a0004c0005t0001g0206 a0004c0005t0002g0375	6	386	0.0155	20	c.-27 others(39): Show c.-270-7352_-270-7333dupAAAATAAAATAAAATAAAAT	CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
CSRNP3_chr2_165464698_165694407	165599283	G G	GAGAAAGA others(13): Show GAGAAAGAAAGAAAGAAAGAA	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00735.hp1 HG01071.hp2 others(15): Show HG00280.hp1 HG00735.hp1 HG01071.hp2 HG01167.hp1 HG02056.hp2 HG02451.hp1 HG02723.hp1 HG03654.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 NA18951.hp2 NA18954.hp2 NA18974.hp1 NA18998.hp2 NA19075.hp1 NA19240.hp2 NA20905.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0004 others(1): Show a0001c0001 a0001c0002 a0001c0004 a0002c0003	a0001c0001t0003 a0001c0001t0011 a0001c0001t0015 others(10): Show a0001c0001t0003 a0001c0001t0011 a0001c0001t0015 a0001c0001t0020 a0001c0001t0029 a0001c0001t0052 a0001c0001t0063 a0001c0001t0085 a0001c0002t0001 a0001c0002t0005 a0001c0002t0008 a0001c0004t0016 a0002c0003t0010	a0001c0001t0003g0184 a0001c0001t0011g0064 a0001c0001t0015g0026 others(15): Show a0001c0001t0003g0184 a0001c0001t0011g0064 a0001c0001t0015g0026 a0001c0001t0015g0219 a0001c0001t0015g0220 a0001c0001t0020g0218 a0001c0001t0029g0186 a0001c0001t0052g0010 a0001c0001t0063g0124 a0001c0001t0085g0137 a0001c0002t0001g0103 a0001c0002t0001g0111 a0001c0002t0001g0133 a0001c0002t0005g0001 a0001c0002t0008g0136 a0001c0004t0016g0085 a0002c0003t0010g0140 a0002c0003t0010g0193	18	246	0.0732	20	c.148 others(37): Show c.148+4097_148+4116dupAAAGAAAGAAAGAAAGAAAG	CSRNP3	ENSG00000178662.16	transcript	ENST00000651982.1	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
CSRNP3_chr2_165464698_165694407	165665775	A A	AAGAGAGA others(13): Show AAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG03540.hp1 HG02572.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0028 a0001c0001t0053 a0001c0001t0028 a0001c0001t0053	a0001c0001t0028g0208 a0001c0001t0053g0121 a0001c0001t0028g0208 a0001c0001t0053g0121	2	246	0.0081	20	c.408 others(37): Show c.408+7763_408+7782dupGAGAGAGAGAGAGAGAGAGA	CSRNP3	ENSG00000178662.16	transcript	ENST00000651982.1	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
CSRNP3_chr2_165464698_165694407	165674681	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18952.hp1 NA18952.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0029 a0001c0001t0029	a0001c0001t0029g0126 a0001c0001t0029g0126	1	246	0.0041	20	c.409 others(37): Show c.409-1617_409-1598dupTATATATATATATATATATA	CSRNP3	ENSG00000178662.16	transcript	ENST00000651982.1	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
CSRP2_chr12_76853709_76884019	76869529	A A	AACACACA others(13): Show AACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02074.hp1 HG02074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0148 a0001c0001t0001g0148	1	388	0.0026	20	c.-1- others(35): Show c.-1-3288_-1-3269dupGTGTGTGTGTGTGTGTGTGT	CSRP2	ENSG00000175183.10	transcript	ENST00000311083.10	protein_coding	1/5			chr12	TogoVar
CSRP3_chr11_19177030_19206983	19188613	A A	AGTGTGTG others(13): Show AGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0130 a0001c0001t0001g0130	1	416	0.0024	20	c.113 others(35): Show c.113-329_113-310dupACACACACACACACACACAC	CSRP3	ENSG00000129170.10	transcript	ENST00000265968.9	protein_coding	2/5			chr11	TogoVar
CSRP3_chr11_19177030_19206983	19197501	C C	CTCTTTCG others(13): Show CTCTTTCGTTCTTTCCTTCTT	intron_variant intron_variant	MODIFIER	HG02486.hp2 NA21309.hp1 HG02486.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0128 a0001c0001t0001g0229 a0001c0001t0001g0128 a0001c0001t0001g0229	2	416	0.0048	20	c.-29 others(37): Show c.-29+4452_-29+4453insAAGAAGGAAAGAACGAAAGA	CSRP3	ENSG00000129170.10	transcript	ENST00000265968.9	protein_coding	1/5			chr11	TogoVar
CSRP3_chr11_19177030_19206983	19197501	C C	CTCTTTCT others(13): Show CTCTTTCTTTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01069.hp1 HG01074.hp2 others(10): Show HG00642.hp2 HG01069.hp1 HG01074.hp2 HG01515.hp1 HG03704.hp2 NA18940.hp1 NA18943.hp2 NA18944.hp1 NA18975.hp1 NA19067.hp1 NA19067.hp2 NA19083.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 others(10): Show a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0282 a0001c0001t0001g0299 a0001c0001t0001g0300 a0001c0001t0001g0301 a0001c0002t0001g0284 a0001c0002t0001g0285	13	416	0.0313	20	c.-29 others(37): Show c.-29+4433_-29+4452dupAAGAAAGAAAGAAAGAAAGA	CSRP3	ENSG00000129170.10	transcript	ENST00000265968.9	protein_coding	1/5			chr11	TogoVar
CST11_chr20_23445412_23457876	23450977	T T	TACCCATA others(13): Show TACCCATATGTCCATCCATCC	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0042 a0001c0001t0001g0042	1	446	0.0022	20	c.334 others(35): Show c.334-408_334-389dupGGATGGATGGACATATGGGT	CST11	ENSG00000125831.10	transcript	ENST00000377009.8	protein_coding	2/2			chr20	TogoVar
CST4_chr20_23680640_23694038	23685075	T T	TACACACA others(13): Show TACACACACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18947.hp2 NA18947.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0002 a0001c0001t0003g0002	1	452	0.0022	20	c.81 others(29): Show c.818_*819insGTGTGTGTGTGTGTGTGTGT	CST4	ENSG00000101441.5	transcript	ENST00000217423.4	protein_coding		564		chr20	TogoVar
CST9L_chr20_23559732_23573484	23560913	C C	CTCTCTCT others(13): Show CTCTCTCTTTCTTTCTTTCTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01943.hp2 HG01943.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0021 a0001c0005t0001g0021	1	392	0.0026	20	c.40 others(31): Show c.4034_*4035insAAGAAAGAAAGAAAGAGAGA	CST9L	ENSG00000101435.5	transcript	ENST00000376979.4	protein_coding		3818		chr20	TogoVar
CST9L_chr20_23559732_23573484	23561084	C C	CTTCTTTC others(13): Show CTTCTTTCTTTCTTTCTTTCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp1 HG04228.hp2 NA18939.hp1 HG00423.hp1 HG04228.hp2 NA18939.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	3	392	0.0077	20	c.38 others(31): Show c.3863_*3864insAGAAAGAAAGAAAGAAAGAA	CST9L	ENSG00000101435.5	transcript	ENST00000376979.4	protein_coding		3647		chr20	TogoVar
CSTA_chr3_122320248_122346969	122333540	G G	GAAGAAAG others(13): Show GAAGAAAGAAAAGAAAGAAGA	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG03491.hp2 HG03492.hp1 others(9): Show HG02132.hp1 HG03491.hp2 HG03492.hp1 NA18612.hp1 NA18942.hp2 NA18949.hp2 NA18969.hp2 NA18974.hp2 NA18980.hp1 NA18989.hp2 NA19000.hp2 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0009 a0001c0001t0001g0043 a0001c0001t0001g0176 others(3): Show a0001c0001t0001g0009 a0001c0001t0001g0043 a0001c0001t0001g0176 a0001c0001t0001g0184 a0001c0001t0001g0189 a0001c0001t0001g0193	12	378	0.0318	20	c.67- others(35): Show c.67-3997_67-3996insAGAAAGAAGAAAGAAAGAAA	CSTA	ENSG00000121552.4	transcript	ENST00000264474.4	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr3	TogoVar
CSTA_chr3_122320248_122346969	122333540	G G	GAAGAAAG others(13): Show GAAGAAAGAAAGAAAGAAAGA	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00741.hp2 HG02129.hp1 others(2): Show HG00280.hp1 HG00741.hp2 HG02129.hp1 HG04204.hp2 NA19060.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0038 a0001c0001t0001g0228 a0002c0003t0001g0038 others(2): Show a0001c0001t0001g0038 a0001c0001t0001g0228 a0002c0003t0001g0038 a0002c0003t0001g0162 a0002c0003t0001g0166	5	378	0.0132	20	c.67- others(35): Show c.67-3973_67-3954dupAGAAAGAAAGAAAGAAAGAA	CSTA	ENSG00000121552.4	transcript	ENST00000264474.4	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr3	TogoVar
CSTF1_chr20_56387645_56411362	56404812	A A	ATTTTTTT others(13): Show ATTTTTTTTTTTTTTTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01934.hp1 HG01981.hp1 HG02148.hp2 others(3): Show HG01934.hp1 HG01981.hp1 HG02148.hp2 HG02895.hp2 HG02897.hp2 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0028 a0001c0001t0033 a0001c0001t0085 others(1): Show a0001c0001t0028 a0001c0001t0033 a0001c0001t0085 a0001c0001t0095	a0001c0001t0028g0008 a0001c0001t0033g0001 a0001c0001t0085g0001 others(1): Show a0001c0001t0028g0008 a0001c0001t0033g0001 a0001c0001t0085g0001 a0001c0001t0095g0002	6	422	0.0142	20	c.10 others(31): Show c.1092_*1111dupTTTTTTTTTTTTTTTTTTTT	CSTF1	ENSG00000101138.12	transcript	ENST00000217109.9	protein_coding	6/6	1112	INFO_REALIGN_3_PRIME	chr20	TogoVar
CSTF2T_chr10_51690486_51704595	51704242	C C	CAGATAGA others(13): Show CAGATAGATAGATAGATAGAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19072.hp1 NA19072.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0000 a0001c0002t0003g0000	1	428	0.0023	20	c.-46 others(31): Show c.-4694_-4693insATCTATCTATCTATCTATCT	CSTF2T	ENSG00000177613.9	transcript	ENST00000331173.6	protein_coding		4648		chr10	TogoVar
CSTF2T_chr10_51690486_51704595	51704250	C C	CAGATAGA others(13): Show CAGATAGATAGATAGATAGAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00735.hp2 HG01243.hp1 HG01884.hp1 others(32): Show HG00735.hp2 HG01243.hp1 HG01884.hp1 HG01891.hp1 HG01981.hp2 HG02004.hp1 HG02132.hp1 HG02145.hp2 HG02258.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp2 HG02572.hp2 HG02622.hp1 HG02630.hp2 HG02809.hp1 HG02895.hp1 HG02897.hp1 HG02922.hp2 HG02970.hp2 HG03041.hp1 HG03098.hp2 HG03195.hp1 HG03209.hp2 HG03516.hp2 HG03540.hp2 HG06807.hp1 HG06807.hp2 NA18941.hp1 NA18944.hp2 NA18951.hp2 NA18983.hp2 NA18988.hp2 NA18994.hp2 NA19066.hp1	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0002 a0001c0003 a0001c0004 others(2): Show a0001c0002 a0001c0003 a0001c0004 a0002c0007 a0007c0013	a0001c0002t0003 a0001c0003t0004 a0001c0003t0005 others(5): Show a0001c0002t0003 a0001c0003t0004 a0001c0003t0005 a0001c0003t0007 a0001c0003t0016 a0001c0004t0002 a0002c0007t0002 a0007c0013t0005	a0001c0002t0003g0000 a0001c0003t0004g0000 a0001c0003t0005g0000 others(5): Show a0001c0002t0003g0000 a0001c0003t0004g0000 a0001c0003t0005g0000 a0001c0003t0007g0000 a0001c0003t0016g0000 a0001c0004t0002g0000 a0002c0007t0002g0000 a0007c0013t0005g0000	35	428	0.0818	20	c.-47 others(31): Show c.-4721_-4702dupATCTATCTATCTATCTATCT	CSTF2T	ENSG00000177613.9	transcript	ENST00000331173.6	protein_coding		4656		chr10	TogoVar
CSTF3_chr11_33079584_33166480	33163925	A A	ATATATAT others(13): Show ATATATATATATATTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19090.hp2 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0250 a0001c0001t0001g0250	1	360	0.0028	20	c.-26 others(31): Show c.-2601_-2600insAAAAAAAATATATATATATA	CSTF3	ENSG00000176102.13	transcript	ENST00000323959.9	protein_coding		2446		chr11	TogoVar
CSTF3_chr11_33079584_33166480	33166264	A A	ATGTAAGT others(13): Show ATGTAAGTGTGTGTGTGTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01981.hp1 HG03098.hp2 NA18978.hp2 HG01981.hp1 HG03098.hp2 NA18978.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0003 a0001c0002t0002 a0001c0001t0002 a0001c0001t0003 a0001c0002t0002	a0001c0001t0002g0054 a0001c0001t0003g0139 a0001c0002t0002g0118 a0001c0001t0002g0054 a0001c0001t0003g0139 a0001c0002t0002g0118	3	360	0.0083	20	c.-49 others(31): Show c.-4940_-4939insCACACACACACACACTTACA	CSTF3	ENSG00000176102.13	transcript	ENST00000323959.9	protein_coding		4785		chr11	TogoVar
CSTPP1_chr11_46931761_47167247	46973780	A A	ATGTGTGT others(13): Show ATGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG03453.hp2 HG02922.hp1 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0223 a0001c0001t0001g0224	2	224	0.0089	20	c.47- others(37): Show c.47-13409_47-13408insGTGTGTGTGTGTGTGTGTGT	CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr11	TogoVar
CSTPP1_chr11_46931761_47167247	47036034	G G	GATATATA others(13): Show GATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02145.hp1 HG01081.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0132 a0001c0001t0003g0126 a0001c0001t0001g0132 a0001c0001t0003g0126	2	224	0.0089	20	c.150 others(39): Show c.150-16351_150-16332dupATATATATATATATATATAT	CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr11	TogoVar
CSTPP1_chr11_46931761_47167247	47065977	T T	TTGTGTGT others(13): Show TTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03579.hp1 NA18995.hp2 HG03579.hp1 NA18995.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0154 a0001c0001t0001g0194 a0001c0001t0001g0154 a0001c0001t0001g0194	2	224	0.0089	20	c.280 others(39): Show c.280+13465_280+13484dupGTGTGTGTGTGTGTGTGTGT	CSTPP1	ENSG00000149179.14	transcript	ENST00000278460.12	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr11	TogoVar
CS_chr12_56266699_56305330	56303534	C C	CATTTTTT others(13): Show CATTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00673.hp2 HG01109.hp1 HG00673.hp2 HG01109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0171 a0001c0001t0001g0235 a0001c0001t0001g0171 a0001c0001t0001g0235	2	316	0.0063	20	c.-33 others(31): Show c.-3334_-3333insAAAAAAAAAAAAAAAAAAAT	CS	ENSG00000062485.19	transcript	ENST00000351328.8	protein_coding		3205		chr12	TogoVar
CS_chr12_56266699_56305330	56303535	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0139 a0001c0001t0001g0139	1	316	0.0032	20	c.-33 others(31): Show c.-3335_-3334insAAAAAAAAAAAAAAAAAAAA	CS	ENSG00000062485.19	transcript	ENST00000351328.8	protein_coding		3206		chr12	TogoVar
CT45A2_chrX_135806668_135825012	135821235	A A	AAAAAGAA others(13): Show AAAAAGAAGGAAGGAAGGAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0017 a0001c0001t0001g0017	1	22	0.0455	20	c.-14 others(31): Show c.-1469_-1468insCTTCCTTCCTTCCTTCTTTT	CT45A2	ENSG00000271449.8	transcript	ENST00000612907.2	protein_coding		1224		chrX	TogoVar
CTC1_chr17_8219815_8253056	8246965	C C	CTTATTTA others(13): Show CTTATTTATTTATTTATTTAT	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0007 a0002c0001t0007	a0002c0001t0007g0183 a0002c0001t0007g0183	1	402	0.0025	20	c.33+ others(35): Show c.33+1019_33+1038dupATAAATAAATAAATAAATAA	CTC1	ENSG00000178971.17	transcript	ENST00000651323.1	protein_coding	1/22			chr17	TogoVar
CTCF_chr16_67557526_67644177	67580772	A A	ATTTTTTT others(13): Show ATTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0162 a0001c0001t0004g0162	1	168	0.0060	20	c.-10 others(37): Show c.-10+9512_-10+9531dupTTTTTTTTTTTTTTTTTTTT	CTCF	ENSG00000102974.16	transcript	ENST00000264010.10	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr16	TogoVar
CTDSPL2_chr15_44422629_44534038	44506025	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG00673.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0003 a0001c0001t0003g0003	1	234	0.0043	20	c.969 others(37): Show c.969+6215_969+6234dupTTTTTTTTTTTTTTTTTTTT	CTDSPL2	ENSG00000137770.14	transcript	ENST00000260327.9	protein_coding	8/12		INFO_REALIGN_3_PRIME	chr15	TogoVar
CTDSPL2_chr15_44422629_44534038	44506412	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18965.hp1 NA19004.hp2 NA18965.hp1 NA19004.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0046 a0001c0002t0005g0048 a0001c0002t0005g0046 a0001c0002t0005g0048	2	234	0.0086	20	c.969 others(37): Show c.969+6601_969+6620dupTTTTTTTTTTTTTTTTTTTT	CTDSPL2	ENSG00000137770.14	transcript	ENST00000260327.9	protein_coding	8/12		INFO_REALIGN_3_PRIME	chr15	TogoVar
CTDSPL_chr3_37856880_37989469	37948808	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG03540.hp1 HG02257.hp2 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0045 a0001c0001t0006g0049 a0001c0001t0006g0045 a0001c0001t0006g0049	2	166	0.0121	20	c.234 others(37): Show c.234+1601_234+1620dupTTTTTTTTTTTTTTTTTTTT	CTDSPL	ENSG00000144677.15	transcript	ENST00000273179.10	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
CTF1_chr16_30891614_30908547	30899107	T T	TACACTCT others(13): Show TACACTCTACGATGTATTTAC	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG03453.hp2 HG02647.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0052 a0001c0001t0004g0053 a0001c0001t0002g0052 a0001c0001t0004g0053	2	308	0.0065	20	c.26- others(33): Show c.26-307_26-288dupACACTCTACGATGTATTTAC	CTF1	ENSG00000150281.7	transcript	ENST00000279804.3	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr16	TogoVar
CTIF_chr18_48534031_48868217	48568633	T T	TAAAAAAA others(13): Show TAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0001 a0001	a0001c0014 a0001c0014	a0001c0014t0028 a0001c0014t0028	a0001c0014t0028g0095 a0001c0014t0028g0095	1	144	0.0069	20	c.-29 others(39): Show c.-29+29337_-29+29356dupAAAAAAAAAAAAAAAAAAAA	CTIF	ENSG00000134030.14	transcript	ENST00000256413.8	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CTIF_chr18_48534031_48868217	48603369	A A	AGATGGAT others(13): Show AGATGGATGGATGGATGGATG	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00642.hp1 HG00735.hp1 others(48): Show HG00639.hp2 HG00642.hp1 HG00735.hp1 HG01069.hp1 HG01346.hp2 HG01934.hp2 HG02055.hp2 HG02080.hp1 HG02080.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp2 HG02451.hp1 HG02486.hp1 HG02630.hp1 HG02647.hp2 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp2 HG02809.hp1 HG02818.hp2 HG02895.hp2 HG02896.hp1 HG02965.hp2 HG02970.hp2 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03486.hp2 HG03490.hp1 HG03654.hp1 HG03654.hp2 HG04115.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18952.hp1 NA18972.hp1 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA19068.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0009 a0002c0012	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(32): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0018 a0001c0001t0019 a0001c0001t0021 a0001c0001t0023 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0033 a0001c0001t0035 a0001c0001t0036 a0001c0001t0038 a0001c0001t0039 a0001c0001t0043 a0001c0001t0046 a0001c0001t0048 a0001c0001t0052 a0001c0001t0053 a0001c0002t0002 a0001c0002t0025 a0001c0002t0042 a0001c0003t0001 a0001c0009t0041 a0002c0012t0002	a0001c0001t0001g0036 a0001c0001t0001g0077 a0001c0001t0001g0087 others(48): Show a0001c0001t0001g0036 a0001c0001t0001g0077 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0129 a0001c0001t0002g0025 a0001c0001t0002g0042 a0001c0001t0002g0068 a0001c0001t0002g0102 a0001c0001t0003g0029 a0001c0001t0003g0049 a0001c0001t0004g0024 a0001c0001t0004g0026 a0001c0001t0005g0006 a0001c0001t0005g0067 a0001c0001t0006g0001 a0001c0001t0008g0139 a0001c0001t0008g0142 a0001c0001t0009g0037 a0001c0001t0009g0076 a0001c0001t0011g0143 a0001c0001t0012g0122 a0001c0001t0013g0127 a0001c0001t0014g0022 a0001c0001t0018g0019 a0001c0001t0018g0065 a0001c0001t0019g0132 a0001c0001t0021g0047 a0001c0001t0023g0051 a0001c0001t0025g0011 a0001c0001t0026g0125 a0001c0001t0027g0028 a0001c0001t0027g0034 a0001c0001t0033g0092 a0001c0001t0035g0058 a0001c0001t0036g0069 a0001c0001t0038g0136 a0001c0001t0039g0043 a0001c0001t0043g0053 a0001c0001t0046g0140 a0001c0001t0048g0119 a0001c0001t0052g0126 a0001c0001t0053g0062 a0001c0002t0002g0038 a0001c0002t0002g0103 a0001c0002t0025g0130 a0001c0002t0042g0050 a0001c0003t0001g0080 a0001c0003t0001g0121 a0001c0009t0041g0131 a0002c0012t0002g0123	51	144	0.3542	20	c.-28 others(39): Show c.-28-16161_-28-16142dupGGATGGATGGATGGATGGAT	CTIF	ENSG00000134030.14	transcript	ENST00000256413.8	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CTIF_chr18_48534031_48868217	48701530	T T	TCCCCCAG others(13): Show TCCCCCAGCCACACTGGGGGC	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00642.hp2 HG00735.hp1 others(85): Show HG00642.hp1 HG00642.hp2 HG00735.hp1 HG01081.hp1 HG01106.hp2 HG01109.hp2 HG01243.hp1 HG01243.hp2 HG01884.hp1 HG01884.hp2 HG02055.hp2 HG02080.hp2 HG02109.hp2 HG02257.hp2 HG02258.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03710.hp1 HG06807.hp1 HG06807.hp2 NA18906.hp1 NA18906.hp2 NA18945.hp2 NA18972.hp2 NA19011.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19068.hp1 NA19068.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp1 NA20905.hp2 NA21309.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0006	a0001c0001 a0001c0002 a0001c0003 others(6): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0009 a0001c0011 a0002c0004 a0003c0008 a0006c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(49): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0001t0023 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0031 a0001c0001t0032 a0001c0001t0033 a0001c0001t0035 a0001c0001t0036 a0001c0001t0037 a0001c0001t0040 a0001c0001t0043 a0001c0001t0044 a0001c0001t0046 a0001c0001t0047 a0001c0001t0048 a0001c0001t0050 a0001c0001t0051 a0001c0001t0052 a0001c0002t0003 a0001c0002t0025 a0001c0002t0045 a0001c0002t0049 a0001c0003t0001 a0001c0003t0007 a0001c0005t0001 a0001c0009t0041 a0001c0011t0013 a0002c0004t0005 a0002c0004t0016 a0003c0008t0006 a0006c0010t0001	a0001c0001t0001g0032 a0001c0001t0001g0081 a0001c0001t0001g0088 others(85): Show a0001c0001t0001g0032 a0001c0001t0001g0081 a0001c0001t0001g0088 a0001c0001t0001g0129 a0001c0001t0002g0025 a0001c0001t0002g0042 a0001c0001t0002g0137 a0001c0001t0003g0004 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0049 a0001c0001t0003g0064 a0001c0001t0003g0098 a0001c0001t0003g0117 a0001c0001t0003g0118 a0001c0001t0004g0008 a0001c0001t0004g0024 a0001c0001t0004g0026 a0001c0001t0004g0055 a0001c0001t0004g0059 a0001c0001t0004g0070 a0001c0001t0004g0084 a0001c0001t0004g0134 a0001c0001t0005g0006 a0001c0001t0005g0067 a0001c0001t0006g0001 a0001c0001t0006g0021 a0001c0001t0006g0060 a0001c0001t0006g0063 a0001c0001t0007g0040 a0001c0001t0007g0046 a0001c0001t0008g0007 a0001c0001t0008g0023 a0001c0001t0008g0139 a0001c0001t0008g0142 a0001c0001t0009g0003 a0001c0001t0009g0037 a0001c0001t0010g0093 a0001c0001t0011g0115 a0001c0001t0011g0143 a0001c0001t0012g0090 a0001c0001t0013g0127 a0001c0001t0014g0022 a0001c0001t0015g0135 a0001c0001t0018g0019 a0001c0001t0019g0132 a0001c0001t0019g0138 a0001c0001t0020g0020 a0001c0001t0020g0057 a0001c0001t0021g0047 a0001c0001t0021g0141 a0001c0001t0022g0009 a0001c0001t0022g0056 a0001c0001t0023g0048 a0001c0001t0023g0051 a0001c0001t0025g0011 a0001c0001t0026g0061 a0001c0001t0026g0125 a0001c0001t0027g0028 a0001c0001t0027g0034 a0001c0001t0031g0018 a0001c0001t0032g0033 a0001c0001t0033g0092 a0001c0001t0035g0058 a0001c0001t0036g0069 a0001c0001t0037g0039 a0001c0001t0040g0073 a0001c0001t0043g0053 a0001c0001t0044g0144 a0001c0001t0046g0140 a0001c0001t0047g0031 a0001c0001t0048g0119 a0001c0001t0050g0124 a0001c0001t0051g0005 a0001c0001t0052g0126 a0001c0002t0003g0128 a0001c0002t0025g0130 a0001c0002t0045g0002 a0001c0002t0049g0072 a0001c0003t0001g0035 a0001c0003t0007g0010 a0001c0005t0001g0079 a0001c0009t0041g0131 a0001c0011t0013g0086 a0002c0004t0005g0054 a0002c0004t0016g0041 a0003c0008t0006g0045 a0006c0010t0001g0111	88	144	0.6111	20	c.508 others(39): Show c.508-10080_508-10079insACACTGGGGGCCCCCCAGCC	CTIF	ENSG00000134030.14	transcript	ENST00000256413.8	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CTNNA1_chr5_138748425_138940034	138825482	G G	GTTTTTTT others(13): Show GTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02129.hp2 HG02486.hp2 others(2): Show HG01243.hp2 HG02129.hp2 HG02486.hp2 HG02572.hp1 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0009 a0001c0001 a0001c0002 a0001c0009	a0001c0001t0001 a0001c0002t0003 a0001c0009t0004 a0001c0001t0001 a0001c0002t0003 a0001c0009t0004	a0001c0001t0001g0041 a0001c0001t0001g0045 a0001c0001t0001g0097 others(2): Show a0001c0001t0001g0041 a0001c0001t0001g0045 a0001c0001t0001g0097 a0001c0002t0003g0047 a0001c0009t0004g0006	5	180	0.0278	20	c.858 others(35): Show c.858+699_858+700insTTTTTTTTTTTTTTTTTTTT	CTNNA1	ENSG00000044115.21	transcript	ENST00000302763.12	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr5	TogoVar
CTNNA1_chr5_138748425_138940034	138916177	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0003 a0001c0012t0003	a0001c0012t0003g0019 a0001c0012t0003g0019	1	180	0.0056	20	c.139 others(39): Show c.1390-1551_1390-1550insAAAAAAAAAAAAAAAAAAAA	CTNNA1	ENSG00000044115.21	transcript	ENST00000302763.12	protein_coding	10/17		INFO_REALIGN_3_PRIME	chr5	TogoVar
CTNNA2_chr2_79508051_80653780	79536574	A A	AGTATGTG others(13): Show AGTATGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00673.hp1 HG01106.hp2 others(6): Show HG00642.hp1 HG00673.hp1 HG01106.hp2 HG01167.hp1 HG02572.hp1 HG02965.hp1 HG03927.hp1 HG04228.hp2 NA18995.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0012 a0002c0006	a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 others(4): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 a0001c0003t0002 a0001c0005t0002 a0001c0012t0002 a0002c0006t0001	a0001c0001t0001g0046 a0001c0002t0001g0035 a0001c0002t0001g0037 others(6): Show a0001c0001t0001g0046 a0001c0002t0001g0035 a0001c0002t0001g0037 a0001c0002t0001g0047 a0001c0003t0001g0038 a0001c0003t0002g0044 a0001c0005t0002g0043 a0001c0012t0002g0019 a0002c0006t0001g0040	9	68	0.1324	20	c.-6+ others(37): Show c.-6+23369_-6+23370insATGTGTGTGTGTGTGTGTGT	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	79536686	T T	TTTTTCTT others(13): Show TTTTTCTTTTCTTTTCTTTTC	intron_variant intron_variant	MODIFIER	NA18995.hp2 NA18995.hp2	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0002 a0001c0012t0002	a0001c0012t0002g0019 a0001c0012t0002g0019	1	68	0.0147	20	c.-6+ others(37): Show c.-6+23488_-6+23507dupTCTTTTCTTTTCTTTTCTTT	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	79563161	G G	GTATATAT others(13): Show GTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0034 a0001c0002t0001g0034	1	68	0.0147	20	c.-6+ others(37): Show c.-6+49962_-6+49981dupATATATATATATATATATAT	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	79814638	C C	CACACACA others(13): Show CACACACACACACACACACAT	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0001 a0002c0006t0001	a0002c0006t0001g0060 a0002c0006t0001g0060	1	68	0.0147	20	c.299 others(39): Show c.299-43374_299-43373insCACACACACACACACACATA	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	3/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	79818821	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0001 a0001c0010t0001	a0001c0010t0001g0024 a0001c0010t0001g0024	1	68	0.0147	20	c.299 others(39): Show c.299-39184_299-39165dupATATATATATATATATATAT	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	3/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	79818821	T T	TTTTATAT others(13): Show TTTTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG02109.hp2 HG02145.hp2 others(2): Show HG00673.hp2 HG02109.hp2 HG02145.hp2 HG03098.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0005 others(1): Show a0001c0001 a0001c0003 a0001c0005 a0001c0011	a0001c0001t0001 a0001c0003t0005 a0001c0005t0002 others(1): Show a0001c0001t0001 a0001c0003t0005 a0001c0005t0002 a0001c0011t0001	a0001c0001t0001g0001 a0001c0001t0001g0053 a0001c0003t0005g0017 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0053 a0001c0003t0005g0017 a0001c0005t0002g0009 a0001c0011t0001g0051	5	68	0.0735	20	c.299 others(39): Show c.299-39191_299-39190insTTATATATATATATATATAT	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	3/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	79844979	T T	TACACACA others(13): Show TACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02630.hp2 HG03098.hp1 others(1): Show HG02257.hp2 HG02630.hp2 HG03098.hp1 HG03139.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0014 others(1): Show a0001c0001 a0001c0003 a0001c0014 a0002c0008	a0001c0001t0001 a0001c0003t0005 a0001c0014t0001 others(1): Show a0001c0001t0001 a0001c0003t0005 a0001c0014t0001 a0002c0008t0001	a0001c0001t0001g0055 a0001c0003t0005g0017 a0001c0014t0001g0016 others(1): Show a0001c0001t0001g0055 a0001c0003t0005g0017 a0001c0014t0001g0016 a0002c0008t0001g0002	4	68	0.0588	20	c.299 others(39): Show c.299-13030_299-13011dupCACACACACACACACACACA	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	3/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80017476	G G	GTGTGTAT others(13): Show GTGTGTATATATATGTATATA	intron_variant intron_variant	MODIFIER	HG04228.hp1 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0052 a0001c0001t0001g0052	1	68	0.0147	20	c.105 others(43): Show c.1056+107703_1056+107722dupGTATATATATGTATATATGT	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	7/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80079828	T T	TAAATAAA others(13): Show TAAATAAAATAAAATAAAATA	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG02109.hp1 HG02257.hp2 others(6): Show HG01167.hp2 HG02109.hp1 HG02257.hp2 HG02258.hp2 HG02572.hp2 HG03225.hp1 HG03453.hp2 HG03471.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0007 a0001c0016	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0003 a0001c0003t0001 a0001c0007t0001 a0001c0016t0001	a0001c0001t0001g0033 a0001c0001t0001g0039 a0001c0001t0001g0055 others(6): Show a0001c0001t0001g0033 a0001c0001t0001g0039 a0001c0001t0001g0055 a0001c0001t0002g0027 a0001c0002t0001g0004 a0001c0002t0003g0036 a0001c0003t0001g0013 a0001c0007t0001g0068 a0001c0016t0001g0045	9	68	0.1324	20	c.105 others(43): Show c.1056+170068_1056+170087dupAATAAAATAAAATAAAATAA	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	7/18		INFO_REALIGN_3_PRIME	chr2	TogoVar

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