Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
C2CD3_chr11_74007718_74176002	74117361	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02258.hp1 HG02559.hp1 others(5): Show HG02055.hp2 HG02258.hp1 HG02559.hp1 HG02965.hp2 HG02976.hp1 HG03098.hp2 HG06807.hp2 NA20752.hp1	a0002 a0004 a0002 a0004	a0002c0003 a0004c0004 a0002c0003 a0004c0004	a0002c0003t0001 a0004c0004t0001 a0002c0003t0001 a0004c0004t0001	a0002c0003t0001g0054 a0002c0003t0001g0055 a0002c0003t0001g0057 others(5): Show a0002c0003t0001g0054 a0002c0003t0001g0055 a0002c0003t0001g0057 a0002c0003t0001g0197 a0002c0003t0001g0201 a0004c0004t0001g0037 a0004c0004t0001g0038 a0004c0004t0001g0043	8	318	0.0252	20	c.152 others(37): Show c.1520+847_1520+866dupATATATATATATATATATAT	C2CD3	ENSG00000168014.18	transcript	ENST00000334126.12	protein_coding	9/32			chr11	TogoVar
C2CD3_chr11_74007718_74176002	74146747	C C	CACACACA others(13): Show CACACACACACACACACACAT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00639.hp2 HG00733.hp2 others(8): Show HG00140.hp2 HG00639.hp2 HG00733.hp2 HG01074.hp1 HG01515.hp1 HG02055.hp2 HG02083.hp2 HG02129.hp1 HG03834.hp2 NA18950.hp2 NA20805.hp1	a0002 a0008 a0010 others(1): Show a0002 a0008 a0010 a0034	a0002c0003 a0002c0005 a0008c0007 others(2): Show a0002c0003 a0002c0005 a0008c0007 a0010c0011 a0034c0033	a0002c0003t0001 a0002c0003t0005 a0002c0005t0001 others(3): Show a0002c0003t0001 a0002c0003t0005 a0002c0005t0001 a0008c0007t0001 a0010c0011t0001 a0034c0033t0001	a0002c0003t0001g0197 a0002c0003t0001g0204 a0002c0003t0001g0208 others(8): Show a0002c0003t0001g0197 a0002c0003t0001g0204 a0002c0003t0001g0208 a0002c0003t0001g0209 a0002c0003t0001g0214 a0002c0003t0005g0080 a0002c0005t0001g0008 a0008c0007t0001g0177 a0008c0007t0001g0221 a0010c0011t0001g0079 a0034c0033t0001g0178	11	318	0.0346	20	c.484 others(37): Show c.484-6920_484-6919insATGTGTGTGTGTGTGTGTGT	C2CD3	ENSG00000168014.18	transcript	ENST00000334126.12	protein_coding	3/32			chr11	TogoVar
C2CD3_chr11_74007718_74176002	74151305	C C	CTTTATTT others(13): Show CTTTATTTATTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0007 a0007	a0007c0009 a0007c0009	a0007c0009t0002 a0007c0009t0002	a0007c0009t0002g0316 a0007c0009t0002g0316	1	318	0.0031	20	c.483 others(39): Show c.483+10074_483+10093dupTAAATAAATAAATAAATAAA	C2CD3	ENSG00000168014.18	transcript	ENST00000334126.12	protein_coding	3/32			chr11	TogoVar
C2CD6_chr2_201482421_201624178	201581433	C C	CATATATA others(13): Show CATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0032 a0032	a0032c0037 a0032c0037	a0032c0037t0001 a0032c0037t0001	a0032c0037t0001g0265 a0032c0037t0001g0265	1	270	0.0037	20	c.639 others(35): Show c.639+642_639+661dupATATATATATATATATATAT	C2CD6	ENSG00000155754.15	transcript	ENST00000439140.6	protein_coding	5/15			chr2	TogoVar
C2orf42_chr2_70144885_70196019	70154414	T T	TAAAAAAA others(13): Show TAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0291 a0001c0001t0001g0291	1	346	0.0029	20	c.151 others(39): Show c.1517-3870_1517-3851dupTTTTTTTTTTTTTTTTTTTT	C2orf42	ENSG00000115998.8	transcript	ENST00000264434.7	protein_coding	9/9			chr2	TogoVar
C2orf50_chr2_11128128_11156317	11132997	T T	TCACACAC others(13): Show TCACACACACACACACACACA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19074.hp2 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0089 a0001c0001t0089	a0001c0001t0089g0030 a0001c0001t0089g0030	1	380	0.0026	20	c.-33 others(29): Show c.-338_-337insCACACACACACACACACACA	C2orf50	ENSG00000150873.12	transcript	ENST00000381585.8	protein_coding		130		chr2	TogoVar
C2orf68_chr2_85600254_85617066	85614979	A A	AGTGTGGT others(13): Show AGTGTGGTGTGGTGTGGTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03516.hp1 NA18942.hp1 HG03516.hp1 NA18942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0006 a0001c0001t0002 a0001c0001t0006	a0001c0001t0002g0002 a0001c0001t0006g0028 a0001c0001t0002g0002 a0001c0001t0006g0028	2	376	0.0053	20	c.-30 others(31): Show c.-3015_-2996dupCACACCACACCACACCACAC	C2orf68	ENSG00000168887.11	transcript	ENST00000306336.6	protein_coding		2914		chr2	TogoVar
C2orf68_chr2_85600254_85617066	85616180	T T	TCGGCCGG others(13): Show TCGGCCGGTAGTGGAGATGTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01934.hp1 HG03710.hp2 HG01934.hp1 HG03710.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0003 a0001c0001t0003g0003	2	376	0.0053	20	c.-42 others(31): Show c.-4216_-4197dupGACATCTCCACTACCGGCCG	C2orf68	ENSG00000168887.11	transcript	ENST00000306336.6	protein_coding		4115		chr2	TogoVar
C2orf69_chr2_199906293_199933273	199922031	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01928.hp1 HG01943.hp1 others(19): Show HG01261.hp1 HG01928.hp1 HG01943.hp1 HG01993.hp2 HG02004.hp1 HG02148.hp2 HG02293.hp1 HG02723.hp1 HG02886.hp2 HG04199.hp1 NA18968.hp2 NA18974.hp1 NA18992.hp2 NA19000.hp1 NA19001.hp1 NA19054.hp2 NA19060.hp2 NA19062.hp1 NA19065.hp2 NA19081.hp2 NA19084.hp1 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0008 a0001c0001t0016 a0001c0002t0002 a0001c0002t0018	a0001c0001t0001g0024 a0001c0001t0001g0052 a0001c0001t0001g0120 others(10): Show a0001c0001t0001g0024 a0001c0001t0001g0052 a0001c0001t0001g0120 a0001c0001t0001g0137 a0001c0001t0003g0187 a0001c0001t0005g0129 a0001c0001t0005g0141 a0001c0001t0005g0149 a0001c0001t0008g0024 a0001c0001t0016g0133 a0001c0002t0002g0003 a0001c0002t0002g0040 a0001c0002t0018g0003	22	412	0.0534	20	c.334 others(37): Show c.334-3027_334-3008dupATATATATATATATATATAT	C2orf69	ENSG00000178074.6	transcript	ENST00000319974.6	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
C2orf72_chr2_231032523_231054719	231044945	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02738.hp2 HG02895.hp2 others(4): Show HG02647.hp2 HG02738.hp2 HG02895.hp2 HG02897.hp2 HG03017.hp1 HG03516.hp1 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0003 a0002c0001 a0001c0003 a0002c0001	a0001c0003t0003 a0001c0003t0029 a0002c0001t0003 a0001c0003t0003 a0001c0003t0029 a0002c0001t0003	a0001c0003t0003g0151 a0001c0003t0003g0153 a0001c0003t0003g0200 others(4): Show a0001c0003t0003g0151 a0001c0003t0003g0153 a0001c0003t0003g0200 a0001c0003t0029g0152 a0002c0001t0003g0081 a0002c0001t0003g0082 a0002c0001t0003g0088	7	460	0.0152	20	c.749 others(37): Show c.749-1919_749-1918insTATATATATATATATATATA	C2orf72	ENSG00000204128.6	transcript	ENST00000373640.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr2	TogoVar
C2orf80_chr2_208160347_208195030	208169269	T T	TTGTGTGT others(13): Show TTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01074.hp2 HG01175.hp1 others(8): Show HG00280.hp1 HG01074.hp2 HG01175.hp1 HG01192.hp2 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG02809.hp2 HG03098.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0120 a0001c0001t0001g0232 a0001c0001t0001g0260 others(8): Show a0001c0001t0001g0120 a0001c0001t0001g0232 a0001c0001t0001g0260 a0001c0001t0001g0262 a0001c0001t0001g0289 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0002g0218 a0001c0001t0003g0142 a0001c0001t0003g0172	11	342	0.0322	20	c.573 others(37): Show c.573+1656_573+1675dupCACACACACACACACACACA	C2orf80	ENSG00000188674.11	transcript	ENST00000341287.9	protein_coding	8/8			chr2	TogoVar
C2orf88_chr2_190175863_190208484	190192452	C C	CTGTGTGT others(13): Show CTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG03130.hp2 NA19240.hp1 HG01192.hp2 HG03130.hp2 NA19240.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0008 a0002c0002t0002 a0002c0002t0008	a0002c0002t0002g0112 a0002c0002t0008g0290 a0002c0002t0008g0291 a0002c0002t0002g0112 a0002c0002t0008g0290 a0002c0002t0008g0291	3	420	0.0071	20	c.-16 others(39): Show c.-164-7225_-164-7206dupGTGTGTGTGTGTGTGTGTGT	C2orf88	ENSG00000187699.10	transcript	ENST00000340623.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
C3_chr19_6672704_6725650	6689360	C C	CCTCTCTC others(13): Show CCTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0084 a0001c0002t0001g0084	1	370	0.0027	20	c.348 others(39): Show c.3489+1249_3489+1268dupAGAGAGAGAGAGAGAGAGAG	C3	ENSG00000125730.18	transcript	ENST00000245907.11	protein_coding	27/40			chr19	TogoVar
C3orf33_chr3_155757617_155811278	155770962	C C	CTGTGTGT others(13): Show CTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0003 a0003	a0003c0008 a0003c0008	a0003c0008t0002 a0003c0008t0002	a0003c0008t0002g0376 a0003c0008t0002g0376	1	406	0.0025	20	c.323 others(37): Show c.323-3313_323-3294dupCACACACACACACACACACA	C3orf33	ENSG00000174928.16	transcript	ENST00000340171.7	protein_coding	3/4			chr3	TogoVar
C3orf38_chr3_88144959_88162965	88162142	G G	GAAAAAAA others(13): Show GAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02129.hp1 NA18964.hp2 HG02129.hp1 NA18964.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0001 a0001c0001t0006g0003 a0001c0001t0001g0001 a0001c0001t0006g0003	2	320	0.0063	20	c.55 others(31): Show c.5507_*5508insAAAAAAAAAAAAAAAAAAAA	C3orf38	ENSG00000179021.10	transcript	ENST00000318887.8	protein_coding		4178		chr3	TogoVar
C3orf62_chr3_49263596_49282232	49267670	C C	CATTTATT others(13): Show CATTTATTTATTTATTTATTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02735.hp2 HG03453.hp2 NA19065.hp1 HG02735.hp2 HG03453.hp2 NA19065.hp1	a0002 a0003 a0002 a0003	a0002c0002 a0003c0003 a0002c0002 a0003c0003	a0002c0002t0001 a0003c0003t0009 a0002c0002t0001 a0003c0003t0009	a0002c0002t0001g0033 a0003c0003t0009g0031 a0002c0002t0001g0033 a0003c0003t0009g0031	3	326	0.0092	20	c.35 others(31): Show c.3509_*3510insAAATAAATAAATAAATAAAT	C3orf62	ENSG00000188315.8	transcript	ENST00000343010.8	protein_coding		925		chr3	TogoVar
C3orf70_chr3_185071838_185158060	185073970	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 HG00408.hp1 HG00408.hp2 others(31): Show HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00544.hp1 HG00639.hp1 HG00741.hp2 HG01243.hp2 HG01258.hp1 HG01952.hp1 HG01978.hp1 HG01981.hp1 HG02071.hp2 HG02129.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03927.hp1 NA18941.hp2 NA18945.hp2 NA18947.hp2 NA18954.hp2 NA18960.hp1 NA18961.hp2 NA18985.hp1 NA18994.hp1 NA19005.hp2 NA19062.hp2 NA19065.hp1 NA19066.hp2 NA19082.hp1 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(9): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0021 a0001c0001t0024 a0001c0001t0041 a0001c0001t0047 a0001c0001t0063 a0001c0001t0086 a0001c0001t0094	a0001c0001t0002g0026 a0001c0001t0002g0037 a0001c0001t0002g0038 others(31): Show a0001c0001t0002g0026 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0042 a0001c0001t0002g0075 a0001c0001t0002g0079 a0001c0001t0002g0088 a0001c0001t0002g0100 a0001c0001t0002g0113 a0001c0001t0002g0116 a0001c0001t0002g0206 a0001c0001t0003g0031 a0001c0001t0003g0044 a0001c0001t0003g0064 a0001c0001t0003g0098 a0001c0001t0003g0130 a0001c0001t0003g0282 a0001c0001t0003g0334 a0001c0001t0004g0245 a0001c0001t0004g0246 a0001c0001t0004g0331 a0001c0001t0006g0062 a0001c0001t0006g0063 a0001c0001t0006g0070 a0001c0001t0007g0039 a0001c0001t0007g0087 a0001c0001t0021g0091 a0001c0001t0021g0096 a0001c0001t0024g0067 a0001c0001t0041g0127 a0001c0001t0047g0002 a0001c0001t0063g0351 a0001c0001t0086g0121 a0001c0001t0094g0030	34	388	0.0876	20	c.90 others(31): Show c.9036_*9037insAAAAAAAAAAAAAAAAAAAA	C3orf70	ENSG00000187068.3	transcript	ENST00000335012.3	protein_coding		2867		chr3	TogoVar
C3orf80_chr3_160220422_160233213	160223765	T T	TAAAAAAA others(13): Show TAAAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00741.hp2 HG02723.hp1 HG03225.hp1 HG00741.hp2 HG02723.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0000 a0001c0001t0006g0000 a0001c0001t0001g0000 a0001c0001t0006g0000	3	410	0.0073	20	c.-18 others(31): Show c.-1871_-1870insAAAAAAAAAAAAAAAAAAAA	C3orf80	ENSG00000180044.6	transcript	ENST00000326474.5	protein_coding		1656		chr3	TogoVar
C3orf84_chr3_49172634_49196858	49194290	G G	GTATATAT others(13): Show GTATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19070.hp2 NA19070.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0003 a0001c0002t0001g0003	1	306	0.0033	20	c.-25 others(31): Show c.-2520_-2519insTATATATATATATATATATA	C3orf84	ENSG00000236980.10	transcript	ENST00000545770.7	protein_coding		2433		chr3	TogoVar
C3orf85_chr3_109131719_109156401	109137637	G G	GTGTGTAT others(13): Show GTGTGTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG02165.hp2 HG02293.hp2 others(6): Show HG01346.hp1 HG02165.hp2 HG02293.hp2 HG02818.hp1 NA18955.hp2 NA18967.hp2 NA19011.hp2 NA19070.hp2 NA19090.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0002 a0001c0002t0001 a0002c0003t0002 a0001c0001t0002 a0001c0002t0001 a0002c0003t0002	a0001c0001t0002g0109 a0001c0002t0001g0016 a0001c0002t0001g0107 others(2): Show a0001c0001t0002g0109 a0001c0002t0001g0016 a0001c0002t0001g0107 a0001c0002t0001g0108 a0002c0003t0002g0127	9	370	0.0243	20	c.49+ others(33): Show c.49+742_49+743insGTGTATATATATATATATAT	C3orf85	ENSG00000241224.8	transcript	ENST00000622536.6	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr3	TogoVar
C3orf85_chr3_109131719_109156401	109137637	G G	GTGTGTGT others(13): Show GTGTGTGTATATATATATATA	intron_variant intron_variant	MODIFIER	NA18944.hp2 NA19010.hp2 NA18944.hp2 NA19010.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0011 a0001c0002t0001 a0001c0002t0011	a0001c0002t0001g0051 a0001c0002t0011g0051 a0001c0002t0001g0051 a0001c0002t0011g0051	2	370	0.0054	20	c.49+ others(33): Show c.49+742_49+743insGTGTGTATATATATATATAT	C3orf85	ENSG00000241224.8	transcript	ENST00000622536.6	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr3	TogoVar
C4A_chr6_31977057_32007681	31978882	C C	CTCTCTTC others(13): Show CTCTCTTCTGTGGAGCTCGTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0006 a0001c0003t0001g0006	1	322	0.0031	20	c.-32 others(31): Show c.-3226_-3225insTCTCTTCTGTGGAGCTCGTT	C4A	ENSG00000244731.10	transcript	ENST00000428956.7	protein_coding		3174		chr6	TogoVar
C4BPA_chr1_207099233_207149972	207118213	G G	GTCTATCT others(13): Show GTCTATCTATCTATCTATCTA	intron_variant intron_variant	MODIFIER	HG02148.hp2 HG02922.hp1 NA20129.hp2 HG02148.hp2 HG02922.hp1 NA20129.hp2	a0001 a0005 a0006 a0001 a0005 a0006	a0001c0001 a0005c0008 a0006c0007 a0001c0001 a0005c0008 a0006c0007	a0001c0001t0001 a0005c0008t0001 a0006c0007t0001 a0001c0001t0001 a0005c0008t0001 a0006c0007t0001	a0001c0001t0001g0062 a0005c0008t0001g0276 a0006c0007t0001g0307 a0001c0001t0001g0062 a0005c0008t0001g0276 a0006c0007t0001g0307	3	342	0.0088	20	c.428 others(37): Show c.428+2713_428+2732dupTATCTATCTATCTATCTATC	C4BPA	ENSG00000123838.11	transcript	ENST00000367070.8	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
C4BPB_chr1_207083860_207104993	207086940	T T	TCAATTCA others(13): Show TCAATTCACAGGAGTATGTGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00280.hp2 others(261): Show HG00099.hp2 HG00140.hp2 HG00280.hp2 HG00323.hp1 HG00423.hp1 HG00423.hp2 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp2 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01256.hp2 HG01257.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp2 HG01516.hp2 HG01517.hp1 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02074.hp1 HG02083.hp1 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp2 HG02809.hp1 HG02818.hp1 HG02886.hp2 HG02895.hp2 HG02922.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG04184.hp1 HG04204.hp1 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18906.hp2 NA18945.hp1 NA18945.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18977.hp1 NA18977.hp2 NA18979.hp2 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18994.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19055.hp1 NA19055.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19078.hp1 NA19078.hp2 NA19080.hp1 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp2 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0002c0004 a0003c0006	a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 others(2): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 a0002c0004t0001 a0003c0006t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(87): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0021 a0001c0001t0001g0025 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0033 a0001c0001t0001g0052 a0001c0001t0001g0056 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0088 a0001c0001t0001g0092 a0001c0001t0001g0095 a0001c0002t0001g0005 a0001c0002t0001g0010 a0001c0002t0001g0012 a0001c0002t0001g0013 a0001c0002t0001g0016 a0001c0002t0001g0018 a0001c0002t0001g0022 a0001c0002t0001g0032 a0001c0002t0001g0034 a0001c0002t0001g0035 a0001c0002t0001g0036 a0001c0002t0001g0037 a0001c0002t0001g0038 a0001c0002t0001g0050 a0001c0002t0001g0051 a0001c0002t0001g0055 a0001c0002t0001g0061 a0001c0002t0001g0062 a0001c0002t0001g0063 a0001c0002t0001g0075 a0001c0002t0001g0087 a0001c0002t0001g0089 a0001c0002t0001g0090 a0001c0002t0001g0091 a0001c0002t0001g0093 a0001c0002t0001g0094 a0001c0002t0001g0096 a0001c0002t0001g0097 a0001c0002t0001g0098 a0001c0002t0001g0099 a0001c0002t0001g0100 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0128 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0131 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0003t0001g0020 a0001c0003t0001g0039 a0001c0003t0001g0101 a0001c0003t0001g0102 a0002c0004t0001g0026 a0003c0006t0001g0006	264	388	0.6804	20	c.-20 others(31): Show c.-2057_-2056insCAATTCACAGGAGTATGTGA	C4BPB	ENSG00000123843.13	transcript	ENST00000367078.8	protein_coding		1919		chr1	TogoVar
C4orf17_chr4_99506021_99547303	99506652	G G	GTCTGTCT others(13): Show GTCTGTCTTTCTTTCTTTCTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01074.hp1 HG01243.hp2 HG02055.hp1 HG01074.hp1 HG01243.hp2 HG02055.hp1	a0002 a0004 a0002 a0004	a0002c0004 a0004c0005 a0002c0004 a0004c0005	a0002c0004t0001 a0004c0005t0001 a0002c0004t0001 a0004c0005t0001	a0002c0004t0001g0247 a0004c0005t0001g0040 a0004c0005t0001g0045 a0002c0004t0001g0247 a0004c0005t0001g0040 a0004c0005t0001g0045	3	386	0.0078	20	c.-47 others(31): Show c.-4714_-4713insTCTGTCTTTCTTTCTTTCTT	C4orf17	ENSG00000138813.10	transcript	ENST00000326581.9	protein_coding		4368		chr4	TogoVar
C4orf17_chr4_99506021_99547303	99506652	G G	GTCTTTCT others(13): Show GTCTTTCTTTCTTTCTTTCTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02965.hp2 NA18944.hp1 NA18956.hp2 others(3): Show HG02965.hp2 NA18944.hp1 NA18956.hp2 NA19068.hp1 NA19074.hp1 NA19081.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0003c0002 a0004c0005 a0001c0001 a0003c0002 a0004c0005	a0001c0001t0001 a0003c0002t0001 a0004c0005t0001 a0001c0001t0001 a0003c0002t0001 a0004c0005t0001	a0001c0001t0001g0002 a0001c0001t0001g0080 a0001c0001t0001g0090 others(3): Show a0001c0001t0001g0002 a0001c0001t0001g0080 a0001c0001t0001g0090 a0003c0002t0001g0006 a0003c0002t0001g0217 a0004c0005t0001g0046	6	386	0.0155	20	c.-47 others(31): Show c.-4714_-4713insTCTTTCTTTCTTTCTTTCTT	C4orf17	ENSG00000138813.10	transcript	ENST00000326581.9	protein_coding		4368		chr4	TogoVar
C4orf19_chr4_37448925_37598510	37508683	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02809.hp2 NA18946.hp1 NA19043.hp1 others(1): Show HG02809.hp2 NA18946.hp1 NA19043.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0022 a0001c0001t0001 a0001c0001t0022	a0001c0001t0001g0110 a0001c0001t0001g0124 a0001c0001t0001g0182 others(1): Show a0001c0001t0001g0110 a0001c0001t0001g0124 a0001c0001t0001g0182 a0001c0001t0022g0031	4	354	0.0113	20	c.-72 others(39): Show c.-72-49336_-72-49335insTTTTTTTTTTTTTTTTTTTT	C4orf19	ENSG00000154274.15	transcript	ENST00000381980.9	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
C4orf19_chr4_37448925_37598510	37595572	G G	GACATGGT others(13): Show GACATGGTGTAATAAAGGTAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(122): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00609.hp1 HG00639.hp2 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp2 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp2 HG01168.hp2 HG01169.hp1 HG01175.hp2 HG01192.hp2 HG01255.hp1 HG01256.hp2 HG01258.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp2 HG01433.hp2 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01884.hp1 HG01993.hp1 HG01993.hp2 HG02040.hp2 HG02055.hp2 HG02074.hp1 HG02132.hp2 HG02135.hp2 HG02145.hp1 HG02148.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02622.hp1 HG02683.hp1 HG02683.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02895.hp2 HG02897.hp2 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03017.hp2 HG03130.hp2 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03471.hp2 HG03486.hp1 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03704.hp1 HG03927.hp1 HG03942.hp1 HG04199.hp2 HG06807.hp1 NA18612.hp2 NA18943.hp2 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18952.hp2 NA18964.hp1 NA18970.hp1 NA18971.hp1 NA18978.hp1 NA18992.hp1 NA18993.hp1 NA18995.hp1 NA19007.hp2 NA19030.hp1 NA19043.hp2 NA19058.hp2 NA19064.hp2 NA19068.hp1 NA19070.hp1 NA19080.hp1 NA19085.hp2 NA19088.hp1 NA19088.hp2 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0006 a0001c0007 others(2): Show a0001c0001 a0001c0006 a0001c0007 a0002c0002 a0002c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(24): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0019 a0001c0001t0020 a0001c0001t0023 a0001c0001t0025 a0001c0001t0038 a0001c0001t0039 a0001c0001t0042 a0001c0001t0051 a0001c0006t0055 a0001c0007t0005 a0002c0002t0004 a0002c0002t0008 a0002c0002t0021 a0002c0002t0035 a0002c0002t0043 a0002c0002t0046 a0002c0004t0024 a0002c0004t0044	a0001c0001t0001g0044 a0001c0001t0001g0059 a0001c0001t0001g0075 others(120): Show a0001c0001t0001g0044 a0001c0001t0001g0059 a0001c0001t0001g0075 a0001c0001t0001g0136 a0001c0001t0001g0145 a0001c0001t0001g0157 a0001c0001t0001g0178 a0001c0001t0001g0193 a0001c0001t0001g0210 a0001c0001t0001g0223 a0001c0001t0001g0227 a0001c0001t0001g0232 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0265 a0001c0001t0001g0291 a0001c0001t0001g0295 a0001c0001t0002g0004 a0001c0001t0002g0012 a0001c0001t0002g0147 a0001c0001t0002g0220 a0001c0001t0003g0015 a0001c0001t0003g0022 a0001c0001t0003g0042 a0001c0001t0003g0043 a0001c0001t0003g0060 a0001c0001t0003g0071 a0001c0001t0003g0072 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0084 a0001c0001t0003g0090 a0001c0001t0003g0116 a0001c0001t0003g0119 a0001c0001t0003g0121 a0001c0001t0003g0129 a0001c0001t0003g0141 a0001c0001t0003g0142 a0001c0001t0003g0143 a0001c0001t0003g0148 a0001c0001t0003g0150 a0001c0001t0003g0154 a0001c0001t0003g0161 a0001c0001t0003g0183 a0001c0001t0003g0189 a0001c0001t0003g0238 a0001c0001t0003g0239 a0001c0001t0003g0241 a0001c0001t0003g0242 a0001c0001t0003g0255 a0001c0001t0003g0293 a0001c0001t0003g0300 a0001c0001t0003g0312 a0001c0001t0003g0313 a0001c0001t0005g0007 a0001c0001t0007g0266 a0001c0001t0011g0111 a0001c0001t0011g0134 a0001c0001t0011g0283 a0001c0001t0011g0284 a0001c0001t0012g0159 a0001c0001t0012g0179 a0001c0001t0013g0045 a0001c0001t0013g0100 a0001c0001t0013g0191 a0001c0001t0014g0013 a0001c0001t0014g0014 a0001c0001t0014g0080 a0001c0001t0014g0149 a0001c0001t0019g0341 a0001c0001t0019g0346 a0001c0001t0019g0347 a0001c0001t0020g0163 a0001c0001t0020g0237 a0001c0001t0023g0089 a0001c0001t0023g0127 a0001c0001t0025g0117 a0001c0001t0025g0123 a0001c0001t0038g0160 a0001c0001t0039g0020 a0001c0001t0042g0036 a0001c0001t0051g0030 a0001c0006t0055g0345 a0001c0007t0005g0337 a0002c0002t0004g0018 a0002c0002t0004g0069 a0002c0002t0004g0095 a0002c0002t0004g0139 a0002c0002t0004g0153 a0002c0002t0004g0166 a0002c0002t0004g0167 a0002c0002t0004g0198 a0002c0002t0004g0207 a0002c0002t0004g0214 a0002c0002t0004g0226 a0002c0002t0004g0244 a0002c0002t0004g0251 a0002c0002t0004g0252 a0002c0002t0004g0256 a0002c0002t0004g0286 a0002c0002t0004g0287 a0002c0002t0004g0289 a0002c0002t0004g0294 a0002c0002t0004g0307 a0002c0002t0004g0317 a0002c0002t0004g0319 a0002c0002t0004g0321 a0002c0002t0004g0322 a0002c0002t0004g0344 a0002c0002t0008g0003 a0002c0002t0008g0068 a0002c0002t0008g0076 a0002c0002t0008g0085 a0002c0002t0008g0186 a0002c0002t0008g0276 a0002c0002t0021g0125 a0002c0002t0021g0225 a0002c0002t0035g0046 a0002c0002t0043g0292 a0002c0002t0046g0171 a0002c0004t0024g0049 a0002c0004t0024g0051 a0002c0004t0044g0281	125	354	0.3531	20	c.45 others(31): Show c.4572_*4573insACATGGTGTAATAAAGGTAT	C4orf19	ENSG00000154274.15	transcript	ENST00000381980.9	protein_coding		2063		chr4	TogoVar
C4orf19_chr4_37448925_37598510	37595593	A A	ACATGGTG others(13): Show ACATGGTGTAATAAAGGTATG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp2 HG01891.hp2 HG02723.hp1 others(4): Show HG01884.hp2 HG01891.hp2 HG02723.hp1 HG02922.hp1 HG03195.hp1 HG03579.hp2 NA18522.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0009 a0001c0001 a0005c0009	a0001c0001t0009 a0005c0009t0047 a0001c0001t0009 a0005c0009t0047	a0001c0001t0009g0001 a0001c0001t0009g0056 a0001c0001t0009g0181 others(3): Show a0001c0001t0009g0001 a0001c0001t0009g0056 a0001c0001t0009g0181 a0001c0001t0009g0348 a0001c0001t0009g0349 a0005c0009t0047g0277	7	354	0.0198	20	c.45 others(31): Show c.4593_*4594insCATGGTGTAATAAAGGTATG	C4orf19	ENSG00000154274.15	transcript	ENST00000381980.9	protein_coding		2084		chr4	TogoVar
C4orf19_chr4_37448925_37598510	37596709	C C	CATATATA others(13): Show CATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0191 a0001c0001t0013g0191	1	354	0.0028	20	c.57 others(31): Show c.5709_*5710insATATATATATATATATATAT	C4orf19	ENSG00000154274.15	transcript	ENST00000381980.9	protein_coding		3200		chr4	TogoVar
C4orf19_chr4_37448925_37598510	37596736	A A	ATATATAT others(13): Show ATATATATATATATATATATT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00609.hp1 HG02970.hp2 HG00609.hp1 HG02970.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0011 a0002c0002t0004 a0001c0001t0011 a0002c0002t0004	a0001c0001t0011g0134 a0002c0002t0004g0226 a0001c0001t0011g0134 a0002c0002t0004g0226	2	354	0.0057	20	c.57 others(31): Show c.5736_*5737insTATATATATATATATATATT	C4orf19	ENSG00000154274.15	transcript	ENST00000381980.9	protein_coding		3227		chr4	TogoVar
C4orf19_chr4_37448925_37598510	37596736	A A	ATATATAT others(13): Show ATATATATATATATATATTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03017.hp1 HG03017.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0344 a0002c0002t0004g0344	1	354	0.0028	20	c.57 others(31): Show c.5736_*5737insTATATATATATATATATTTT	C4orf19	ENSG00000154274.15	transcript	ENST00000381980.9	protein_coding		3227		chr4	TogoVar
C4orf19_chr4_37448925_37598510	37596736	A A	ATATATAT others(13): Show ATATATATATATATATTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp1 HG01975.hp2 NA18943.hp2 others(1): Show HG01243.hp1 HG01975.hp2 NA18943.hp2 NA19089.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0009 a0002c0002t0004 a0001c0001t0002 a0001c0001t0009 a0002c0002t0004	a0001c0001t0002g0233 a0001c0001t0002g0325 a0001c0001t0009g0263 others(1): Show a0001c0001t0002g0233 a0001c0001t0002g0325 a0001c0001t0009g0263 a0002c0002t0004g0286	4	354	0.0113	20	c.57 others(31): Show c.5736_*5737insTATATATATATATATTTTTT	C4orf19	ENSG00000154274.15	transcript	ENST00000381980.9	protein_coding		3227		chr4	TogoVar
C4orf19_chr4_37448925_37598510	37598078	A A	AATATATA others(13): Show AATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02486.hp1 HG02970.hp1 HG03927.hp1 others(1): Show HG02486.hp1 HG02970.hp1 HG03927.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0082 a0001c0001t0003g0116 a0001c0001t0003g0300 others(1): Show a0001c0001t0003g0082 a0001c0001t0003g0116 a0001c0001t0003g0300 a0001c0001t0003g0312	4	354	0.0113	20	c.70 others(31): Show c.7078_*7079insATATATATATATATATATAT	C4orf19	ENSG00000154274.15	transcript	ENST00000381980.9	protein_coding		4569		chr4	TogoVar
C4orf45_chr4_158888134_159040229	158911347	C C	CAAATAAA others(13): Show CAAATAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02970.hp2 HG02717.hp1 HG02970.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0007 a0001c0001 a0003c0007	a0001c0001t0001 a0003c0007t0001 a0001c0001t0001 a0003c0007t0001	a0001c0001t0001g0158 a0003c0007t0001g0122 a0001c0001t0001g0158 a0003c0007t0001g0122	2	264	0.0076	20	c.546 others(37): Show c.546+3803_546+3822dupATTTATTTATTTATTTATTT	C4orf45	ENSG00000164123.7	transcript	ENST00000434826.3	protein_coding	4/4			chr4	TogoVar
C4orf45_chr4_158888134_159040229	158930191	G G	GTCTCTCT others(13): Show GTCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0254 a0001c0001t0002g0254	1	264	0.0038	20	c.357 others(39): Show c.357-14852_357-14833dupGAGAGAGAGAGAGAGAGAGA	C4orf45	ENSG00000164123.7	transcript	ENST00000434826.3	protein_coding	3/4			chr4	TogoVar
C4orf45_chr4_158888134_159040229	158964150	C C	CACAAAAC others(13): Show CACAAAACAAAACAAAACAAA	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0253 a0001c0001t0002g0253	1	264	0.0038	20	c.298 others(37): Show c.298-3807_298-3806insTTTGTTTTGTTTTGTTTTGT	C4orf45	ENSG00000164123.7	transcript	ENST00000434826.3	protein_coding	2/4			chr4	TogoVar
C4orf45_chr4_158888134_159040229	159017356	T T	TACACATA others(13): Show TACACATACACACACACACAC	intron_variant intron_variant	MODIFIER	NA19070.hp2 NA19070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0041 a0001c0001t0001g0041	1	264	0.0038	20	c.64+ others(37): Show c.64+17676_64+17677insGTGTGTGTGTGTGTATGTGT	C4orf45	ENSG00000164123.7	transcript	ENST00000434826.3	protein_coding	1/4			chr4	TogoVar
C4orf47_chr4_185421254_185454826	185443320	G G	GTATATAT others(13): Show GTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0109 a0001c0001t0004g0109	1	358	0.0028	20	c.715 others(37): Show c.715-1640_715-1621dupATATATATATATATATATAT	C4orf47	ENSG00000205129.9	transcript	ENST00000378850.5	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr4	TogoVar
C4orf47_chr4_185421254_185454826	185443342	A A	ATATATAT others(13): Show ATATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	HG02135.hp1 HG02135.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0160 a0001c0001t0001g0160	1	358	0.0028	20	c.715 others(37): Show c.715-1621_715-1620insATATATATATATATATTTTT	C4orf47	ENSG00000205129.9	transcript	ENST00000378850.5	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr4	TogoVar
C4orf50_chr4_5954375_6023431	5987412	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0056 a0056	a0056c0063 a0056c0063	a0056c0063t0000 a0056c0063t0000	a0056c0063t0000g0070 a0056c0063t0000g0070	1	346	0.0029	20	c.369 others(37): Show c.3699+915_3699+934dupTTTTTTTTTTTTTTTTTTTT	C4orf50	ENSG00000181215.17	transcript	ENST00000711657.1	protein_coding	6/11			chr4	TogoVar
C4orf54_chr4_99631529_99662828	99643739	A A	AACACACA others(13): Show AACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0007 a0004c0004t0007	a0004c0004t0007g0088 a0004c0004t0007g0088	1	392	0.0026	20	c.37 others(37): Show c.37-2563_*37-2544dupGTGTGTGTGTGTGTGTGTGT	C4orf54	ENSG00000248713.2	transcript	ENST00000511828.2	protein_coding	2/2			chr4	TogoVar
C4orf54_chr4_99631529_99662828	99643792	A A	ACACACAC others(13): Show ACACACACACACACACACCCC	intron_variant intron_variant	MODIFIER	HG02293.hp1 HG02293.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0219 a0002c0002t0001g0219	1	392	0.0026	20	c.37 others(37): Show c.37-2597_*37-2596insGGGGTGTGTGTGTGTGTGTG	C4orf54	ENSG00000248713.2	transcript	ENST00000511828.2	protein_coding	2/2			chr4	TogoVar
C4orf54_chr4_99631529_99662828	99648554	A A	AGTGTGTG others(13): Show AGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG01884.hp2 HG02055.hp1 others(7): Show HG01192.hp2 HG01884.hp2 HG02055.hp1 HG02486.hp1 HG02602.hp1 HG02717.hp1 HG02922.hp2 HG02970.hp2 HG02976.hp1 HG03540.hp2	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0005 a0005c0005t0014 a0005c0005t0016 others(2): Show a0005c0005t0005 a0005c0005t0014 a0005c0005t0016 a0005c0005t0021 a0005c0005t0034	a0005c0005t0005g0098 a0005c0005t0005g0099 a0005c0005t0005g0102 others(6): Show a0005c0005t0005g0098 a0005c0005t0005g0099 a0005c0005t0005g0102 a0005c0005t0005g0103 a0005c0005t0005g0109 a0005c0005t0014g0100 a0005c0005t0016g0031 a0005c0005t0021g0053 a0005c0005t0034g0101	10	392	0.0255	20	c.36 others(35): Show c.36+657_*36+676dupACACACACACACACACACAC	C4orf54	ENSG00000248713.2	transcript	ENST00000511828.2	protein_coding	2/2			chr4	TogoVar
C5_chr9_120947335_121055275	121002316	G G	GTGTGTGT others(13): Show GTGTGTGTATATATATATATA	intron_variant intron_variant	MODIFIER	NA19003.hp1 NA19003.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0160 a0002c0002t0001g0160	1	276	0.0036	20	c.256 others(39): Show c.2562+3602_2562+3603insTATATATATATATACACACA	C5	ENSG00000106804.10	transcript	ENST00000223642.3	protein_coding	20/40			chr9	TogoVar
C5_chr9_120947335_121055275	121002316	G G	GTGTGTGT others(13): Show GTGTGTGTGTATATATATATA	intron_variant intron_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0157 a0002c0002t0001g0157	1	276	0.0036	20	c.256 others(39): Show c.2562+3602_2562+3603insTATATATATATACACACACA	C5	ENSG00000106804.10	transcript	ENST00000223642.3	protein_coding	20/40			chr9	TogoVar
C5_chr9_120947335_121055275	121002316	G G	GTGTGTGT others(13): Show GTGTGTGTGTGTATATATATA	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG01069.hp1 HG01071.hp1 others(25): Show HG00408.hp1 HG01069.hp1 HG01071.hp1 HG01175.hp1 HG02129.hp2 HG02132.hp2 HG02155.hp2 HG03654.hp2 HG03834.hp1 NA18747.hp1 NA18944.hp1 NA18946.hp2 NA18950.hp2 NA18952.hp2 NA18959.hp1 NA18969.hp2 NA18970.hp2 NA18974.hp2 NA18975.hp2 NA18981.hp2 NA18990.hp1 NA19010.hp2 NA19060.hp2 NA19063.hp1 NA19070.hp1 NA19090.hp2 NA20300.hp1 NA20905.hp1	a0002 a0005 a0011 a0002 a0005 a0011	a0002c0002 a0002c0026 a0005c0007 others(1): Show a0002c0002 a0002c0026 a0005c0007 a0011c0013	a0002c0002t0001 a0002c0026t0001 a0005c0007t0001 others(1): Show a0002c0002t0001 a0002c0026t0001 a0005c0007t0001 a0011c0013t0001	a0002c0002t0001g0110 a0002c0002t0001g0124 a0002c0002t0001g0128 others(25): Show a0002c0002t0001g0110 a0002c0002t0001g0124 a0002c0002t0001g0128 a0002c0002t0001g0130 a0002c0002t0001g0134 a0002c0002t0001g0136 a0002c0002t0001g0138 a0002c0002t0001g0141 a0002c0002t0001g0147 a0002c0002t0001g0152 a0002c0002t0001g0158 a0002c0002t0001g0159 a0002c0002t0001g0163 a0002c0002t0001g0164 a0002c0002t0001g0167 a0002c0002t0001g0169 a0002c0002t0001g0171 a0002c0002t0001g0172 a0002c0002t0001g0173 a0002c0002t0001g0222 a0002c0026t0001g0174 a0005c0007t0001g0116 a0005c0007t0001g0261 a0005c0007t0001g0262 a0005c0007t0001g0263 a0011c0013t0001g0142 a0011c0013t0001g0143 a0011c0013t0001g0146	28	276	0.1015	20	c.256 others(39): Show c.2562+3602_2562+3603insTATATATATACACACACACA	C5	ENSG00000106804.10	transcript	ENST00000223642.3	protein_coding	20/40			chr9	TogoVar
C5_chr9_120947335_121055275	121002316	G G	GTGTGTGT others(13): Show GTGTGTGTGTGTGTATATATA	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01928.hp2 NA18979.hp1 others(3): Show HG01070.hp1 HG01928.hp2 NA18979.hp1 NA18980.hp2 NA18982.hp1 NA19055.hp2	a0002 a0005 a0002 a0005	a0002c0002 a0005c0007 a0002c0002 a0005c0007	a0002c0002t0001 a0005c0007t0001 a0002c0002t0001 a0005c0007t0001	a0002c0002t0001g0129 a0002c0002t0001g0135 a0002c0002t0001g0145 others(3): Show a0002c0002t0001g0129 a0002c0002t0001g0135 a0002c0002t0001g0145 a0002c0002t0001g0165 a0002c0002t0001g0193 a0005c0007t0001g0259	6	276	0.0217	20	c.256 others(39): Show c.2562+3602_2562+3603insTATATATACACACACACACA	C5	ENSG00000106804.10	transcript	ENST00000223642.3	protein_coding	20/40			chr9	TogoVar
C5_chr9_120947335_121055275	121018742	A A	AAAGAAAG others(13): Show AAAGAAAGAAAGGAAGGAAGG	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0028 a0003c0004t0001g0028	1	276	0.0036	20	c.150 others(37): Show c.1507-891_1507-890insCCTTCCTTCCTTTCTTTCTT	C5	ENSG00000106804.10	transcript	ENST00000223642.3	protein_coding	12/40			chr9	TogoVar
C5_chr9_120947335_121055275	121024324	A A	AGGGGGAG others(13): Show AGGGGGAGGGGAGGGGGAGGG	intron_variant intron_variant	MODIFIER	NA18946.hp1 NA18959.hp2 NA18946.hp1 NA18959.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0181 a0001c0001t0001g0192 a0001c0001t0001g0181 a0001c0001t0001g0192	2	276	0.0073	20	c.100 others(37): Show c.1001-825_1001-806dupCCCTCCCCCTCCCCTCCCCC	C5	ENSG00000106804.10	transcript	ENST00000223642.3	protein_coding	9/40			chr9	TogoVar

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