Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LMO7_chr13_75631330_75864866	75632862	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG01168.hp2 others(8): Show HG00099.hp1 HG00140.hp1 HG01168.hp2 HG01496.hp1 HG02735.hp1 HG03017.hp1 HG03490.hp1 HG03492.hp1 HG03831.hp2 HG03834.hp2 NA20905.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0005	a0001c0001 a0002c0011 a0004c0004 others(2): Show a0001c0001 a0002c0011 a0004c0004 a0004c0013 a0005c0005	a0001c0001t0002 a0002c0011t0002 a0004c0004t0002 others(3): Show a0001c0001t0002 a0002c0011t0002 a0004c0004t0002 a0004c0013t0002 a0005c0005t0001 a0005c0005t0015	a0001c0001t0002g0085 a0002c0011t0002g0031 a0002c0011t0002g0038 others(8): Show a0001c0001t0002g0085 a0002c0011t0002g0031 a0002c0011t0002g0038 a0002c0011t0002g0071 a0002c0011t0002g0075 a0004c0004t0002g0060 a0004c0013t0002g0019 a0004c0013t0002g0059 a0004c0013t0002g0061 a0005c0005t0001g0125 a0005c0005t0015g0171	11	272	0.0404	21	c.-37 others(32): Show c.-3796_-3795insTTTTTTTTTTTTTTTTTTTTT	LMO7	ENSG00000136153.20	transcript	ENST00000377534.8	protein_coding		3467		chr13	TogoVar
LMOD1_chr1_201891456_201951548	201933559	A A	ATATGTAC others(14): Show ATATGTACACATATACATACAT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00597.hp1 HG00609.hp1 HG00438.hp2 HG00597.hp1 HG00609.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0198 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0198 a0001c0001t0001g0228 a0001c0001t0001g0229	3	400	0.0075	21	c.261 others(40): Show c.261+12520_261+12521insATGTATGTATATGTGTACATA	LMOD1	ENSG00000163431.14	transcript	ENST00000367288.5	protein_coding	1/2			chr1	TogoVar
LMOD1_chr1_201891456_201951548	201947181	G G	GAGAGAGA others(14): Show GAGAGAGAGAGAGAGAGAGAGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03017.hp1 NA18942.hp2 HG03017.hp1 NA18942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0058 a0001c0001t0001g0140 a0001c0001t0001g0058 a0001c0001t0001g0140	2	400	0.0050	21	c.-84 others(30): Show c.-842_-841insTCTCTCTCTCTCTCTCTCTCT	LMOD1	ENSG00000163431.14	transcript	ENST00000367288.5	protein_coding		634		chr1	TogoVar
LMX1A_chr1_165196867_165361715	165247054	C C	CTTTTTTT others(14): Show CTTTTTTTTTCTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02895.hp1 HG02451.hp2 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0246 a0001c0001t0005g0168 a0001c0001t0002g0246 a0001c0001t0005g0168	2	288	0.0069	21	c.496 others(38): Show c.496+2353_496+2354insAAAAAAAAAAAGAAAAAAAAA	LMX1A	ENSG00000162761.14	transcript	ENST00000342310.7	protein_coding	4/8			chr1	TogoVar
LMX1A_chr1_165196867_165361715	165247054	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01192.hp1 NA18946.hp1 NA18951.hp1 others(2): Show HG01192.hp1 NA18946.hp1 NA18951.hp1 NA18992.hp2 NA20129.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 others(1): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0013	a0001c0002t0001g0050 a0001c0002t0002g0230 a0001c0002t0002g0263 others(2): Show a0001c0002t0001g0050 a0001c0002t0002g0230 a0001c0002t0002g0263 a0001c0002t0003g0087 a0001c0002t0013g0233	5	288	0.0174	21	c.496 others(38): Show c.496+2333_496+2353dupAAAAAAAAAAAAAAAAAAAAA	LMX1A	ENSG00000162761.14	transcript	ENST00000342310.7	protein_coding	4/8			chr1	TogoVar
LMX1B_chr9_126608928_126706032	126668443	T T	TTTATTAT others(14): Show TTTATTATTATTATTATTATTA	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp2 HG00741.hp1 others(10): Show HG00280.hp1 HG00323.hp2 HG00741.hp1 HG01243.hp2 HG01358.hp2 HG01952.hp2 HG02572.hp1 HG02683.hp1 HG02886.hp1 HG03540.hp2 HG03579.hp1 NA18906.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0180 a0001c0001t0183 a0001c0002t0006 others(7): Show a0001c0001t0180 a0001c0001t0183 a0001c0002t0006 a0001c0002t0088 a0001c0002t0168 a0001c0002t0192 a0001c0004t0063 a0001c0004t0151 a0001c0004t0186 a0001c0004t0187	a0001c0001t0180g0198 a0001c0001t0183g0154 a0001c0002t0006g0182 others(10): Show a0001c0001t0180g0198 a0001c0001t0183g0154 a0001c0002t0006g0182 a0001c0002t0006g0184 a0001c0002t0006g0190 a0001c0002t0006g0191 a0001c0002t0088g0098 a0001c0002t0168g0180 a0001c0002t0192g0197 a0001c0004t0063g0080 a0001c0004t0151g0065 a0001c0004t0186g0081 a0001c0004t0187g0083	13	342	0.0380	21	c.327 others(40): Show c.327-22387_327-22367dupATTATTATTATTATTATTATT	LMX1B	ENSG00000136944.19	transcript	ENST00000373474.9	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr9	TogoVar
LNX1_chr4_53454301_53596486	53495548	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03130.hp2 NA19030.hp1 HG03130.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0021 a0001c0001t0009 a0001c0001t0021	a0001c0001t0009g0118 a0001c0001t0021g0217 a0001c0001t0009g0118 a0001c0001t0021g0217	2	356	0.0056	21	c.135 others(38): Show c.1350+474_1350+475insAAAAAAAAAAAAAAAAAAAAA	LNX1	ENSG00000072201.14	transcript	ENST00000263925.8	protein_coding	6/10			chr4	TogoVar
LNX1_chr4_53454301_53596486	53506856	T T	TAAAAAAA others(14): Show TAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01975.hp2 HG02717.hp2 others(2): Show HG00642.hp2 HG01975.hp2 HG02717.hp2 NA19030.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0021 a0001c0001t0001 a0001c0001t0002 a0001c0001t0021	a0001c0001t0001g0269 a0001c0001t0002g0099 a0001c0001t0002g0147 others(2): Show a0001c0001t0001g0269 a0001c0001t0002g0099 a0001c0001t0002g0147 a0001c0001t0002g0344 a0001c0001t0021g0217	5	356	0.0140	21	c.775 others(36): Show c.775+460_775+461insTTTTTTTTTTTTTTTTTTTTT	LNX1	ENSG00000072201.14	transcript	ENST00000263925.8	protein_coding	4/10			chr4	TogoVar
LNX1_chr4_53454301_53596486	53529135	A A	ACACACAC others(14): Show ACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG03927.hp1 NA18997.hp1 HG03927.hp1 NA18997.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0094 a0001c0001t0003g0132 a0001c0001t0001g0094 a0001c0001t0003g0132	2	356	0.0056	21	c.381 others(40): Show c.381-20909_381-20908insGTGTGTGTGTGTGTGTGTGTG	LNX1	ENSG00000072201.14	transcript	ENST00000263925.8	protein_coding	2/10			chr4	TogoVar
LOC122455340_chr12_53236900_53247722	53241501	T T	TGGGTCAG others(14): Show TGGGTCAGATCCTCCCACCTCA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01993.hp2 HG01993.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0000 a0002c0002t0001g0000	1	408	0.0025	21	c.-42 others(30): Show c.-422_-421insGGGTCAGATCCTCCCACCTCA	LOC122455340	ENSG00000283536.3	transcript	ENST00000635789.2	protein_coding		398		chr12	TogoVar
LOC128462377_chr16_89312046_89423292	89384879	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG02300.hp2 NA18975.hp1 HG01123.hp1 HG02300.hp2 NA18975.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0228 a0001c0001t0001g0293 a0001c0001t0001g0349 a0001c0001t0001g0228 a0001c0001t0001g0293 a0001c0001t0001g0349	3	366	0.0082	21	c.9+3 others(36): Show c.9+33384_9+33404dupAAAAAAAAAAAAAAAAAAAAA	LOC128462377	ENSG00000288715.2	transcript	ENST00000711617.1	protein_coding	1/1			chr16	TogoVar
LOC128462377_chr16_89312046_89423292	89415829	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG01175.hp1 HG01192.hp2 others(10): Show HG01123.hp2 HG01175.hp1 HG01192.hp2 HG01261.hp2 HG03017.hp2 HG03704.hp1 HG04204.hp2 NA18944.hp1 NA18947.hp2 NA18952.hp1 NA18959.hp1 NA19005.hp1 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0126 a0001c0001t0001g0127 others(10): Show a0001c0001t0001g0007 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0216 a0001c0001t0001g0217	13	366	0.0355	21	c.9+2 others(34): Show c.9+2434_9+2454dupTTTTTTTTTTTTTTTTTTTTT	LOC128462377	ENSG00000288715.2	transcript	ENST00000711617.1	protein_coding	1/1			chr16	TogoVar
LOC128706665_chr20_10408708_10439222	10427021	A A	ACTGACAC others(14): Show ACTGACACACACACAGACACAC	intron_variant intron_variant	MODIFIER	HG02056.hp2 NA18951.hp1 NA18972.hp2 others(2): Show HG02056.hp2 NA18951.hp1 NA18972.hp2 NA19056.hp2 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0285 a0001c0001t0002g0298 a0001c0001t0002g0299 others(2): Show a0001c0001t0002g0285 a0001c0001t0002g0298 a0001c0001t0002g0299 a0001c0001t0002g0309 a0001c0001t0002g0310	5	408	0.0123	21	c.-21 others(38): Show c.-21-6264_-21-6263insGTGTGTCTGTGTGTGTGTCAG	LOC128706665	ENSG00000285723.2	transcript	ENST00000649912.2	protein_coding	1/2			chr20	TogoVar
LOC128706665_chr20_10408708_10439222	10427080	A A	ACACACAC others(14): Show ACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0243 a0001c0001t0001g0243	1	408	0.0025	21	c.-21 others(38): Show c.-21-6323_-21-6322insGTGTGTGTGTGTGTGTGTGTG	LOC128706665	ENSG00000285723.2	transcript	ENST00000649912.2	protein_coding	1/2			chr20	TogoVar
LOC128706666_chr20_10408708_10439222	10427021	A A	ACTGACAC others(14): Show ACTGACACACACACAGACACAC	intron_variant intron_variant	MODIFIER	HG02056.hp2 NA18951.hp1 NA18972.hp2 others(2): Show HG02056.hp2 NA18951.hp1 NA18972.hp2 NA19056.hp2 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0285 a0001c0001t0002g0298 a0001c0001t0002g0299 others(2): Show a0001c0001t0002g0285 a0001c0001t0002g0298 a0001c0001t0002g0299 a0001c0001t0002g0309 a0001c0001t0002g0310	5	408	0.0123	21	c.-27 others(40): Show c.-275-6264_-275-6263insGTGTGTCTGTGTGTGTGTCAG	LOC128706666	ENSG00000285508.2	transcript	ENST00000713549.1	protein_coding	1/2			chr20	TogoVar
LOC128706666_chr20_10408708_10439222	10427080	A A	ACACACAC others(14): Show ACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0243 a0001c0001t0001g0243	1	408	0.0025	21	c.-27 others(40): Show c.-275-6323_-275-6322insGTGTGTGTGTGTGTGTGTGTG	LOC128706666	ENSG00000285508.2	transcript	ENST00000713549.1	protein_coding	1/2			chr20	TogoVar
LOC400499_chr16_11367015_11532247	11370013	T T	TATATATA others(14): Show TATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0094 a0094	a0094c0074 a0094c0074	a0094c0074t0001 a0094c0074t0001	a0094c0074t0001g0035 a0094c0074t0001g0035	1	310	0.0032	21	c.27 others(32): Show c.2720_*2721insTATATATATATATATATATAT	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding		2001		chr16	TogoVar
LOC400499_chr16_11367015_11532247	11499332	G G	GGAAGGGA others(14): Show GGAAGGGAGGGAGGAGAGGGGA	intron_variant intron_variant	MODIFIER	NA18997.hp2 NA18997.hp2	a0021 a0021	a0021c0018 a0021c0018	a0021c0018t0002 a0021c0018t0002	a0021c0018t0002g0252 a0021c0018t0002g0252	1	310	0.0032	21	c.124 others(40): Show c.1245+1471_1245+1472insTCCCCTCTCCTCCCTCCCTTC	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	10/66			chr16	TogoVar
LOC400499_chr16_11367015_11532247	11500511	A A	AAATAATA others(14): Show AAATAATAATAATAATAATAAT	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG02109.hp2 HG02258.hp1 others(12): Show HG00609.hp2 HG02109.hp2 HG02258.hp1 HG02615.hp1 HG03453.hp2 HG03579.hp2 HG03704.hp2 HG04228.hp1 HG06807.hp2 NA18747.hp1 NA18944.hp2 NA18956.hp2 NA19009.hp1 NA19070.hp1 NA19085.hp1	a0010 a0030 a0046 others(10): Show a0010 a0030 a0046 a0094 a0106 a0121 a0164 a0176 a0180 a0192 a0195 a0225 a0240	a0010c0007 a0030c0029 a0046c0241 others(10): Show a0010c0007 a0030c0029 a0046c0241 a0094c0074 a0106c0041 a0121c0073 a0164c0230 a0176c0072 a0180c0258 a0192c0260 a0195c0232 a0225c0254 a0240c0253	a0010c0007t0004 a0010c0007t0009 a0030c0029t0001 others(11): Show a0010c0007t0004 a0010c0007t0009 a0030c0029t0001 a0046c0241t0003 a0094c0074t0001 a0106c0041t0002 a0121c0073t0004 a0164c0230t0012 a0176c0072t0006 a0180c0258t0003 a0192c0260t0001 a0195c0232t0007 a0225c0254t0003 a0240c0253t0004	a0010c0007t0004g0055 a0010c0007t0009g0096 a0030c0029t0001g0272 others(12): Show a0010c0007t0004g0055 a0010c0007t0009g0096 a0030c0029t0001g0272 a0030c0029t0001g0273 a0046c0241t0003g0145 a0094c0074t0001g0035 a0106c0041t0002g0296 a0121c0073t0004g0003 a0164c0230t0012g0224 a0176c0072t0006g0002 a0180c0258t0003g0180 a0192c0260t0001g0138 a0195c0232t0007g0225 a0225c0254t0003g0257 a0240c0253t0004g0264	15	310	0.0484	21	c.124 others(38): Show c.1245+272_1245+292dupATTATTATTATTATTATTATT	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	10/66			chr16	TogoVar
LOC728743_chr7_150400676_150417470	150405403	A A	ACTGCGGG others(14): Show ACTGCGGGCGTGCTACCGTATT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18949.hp2 NA18949.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0006 a0001c0001t0002g0006	1	432	0.0023	21	c.-53 others(30): Show c.-530_-529insCTGCGGGCGTGCTACCGTATT	LOC728743	ENSG00000284691.1	transcript	ENST00000642087.2	protein_coding		272		chr7	TogoVar
LOXHD1_chr18_46472273_46662220	46494845	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG04199.hp2 HG04199.hp2	a0006 a0006	a0006c0067 a0006c0067	a0006c0067t0001 a0006c0067t0001	a0006c0067t0001g0198 a0006c0067t0001g0198	1	270	0.0037	21	c.587 others(40): Show c.5879-5704_5879-5703insAAAAAAAAAAAAAAAAAAAAA	LOXHD1	ENSG00000167210.17	transcript	ENST00000642948.1	protein_coding	37/40			chr18	TogoVar
LOXHD1_chr18_46472273_46662220	46545627	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG03098.hp1 HG02895.hp2 HG03098.hp1	a0008 a0009 a0008 a0009	a0008c0006 a0009c0018 a0008c0006 a0009c0018	a0008c0006t0001 a0009c0018t0001 a0008c0006t0001 a0009c0018t0001	a0008c0006t0001g0207 a0009c0018t0001g0124 a0008c0006t0001g0207 a0009c0018t0001g0124	2	270	0.0074	21	c.351 others(38): Show c.3515-207_3515-206insAAAAAAAAAAAAAAAAAAAAA	LOXHD1	ENSG00000167210.17	transcript	ENST00000642948.1	protein_coding	22/40			chr18	TogoVar
LOXL4_chr10_98242690_98273194	98268404	C C	CGGGGGGC others(14): Show CGGGGGGCGGGGGGAGCGGGGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02451.hp2 HG03486.hp1 HG02451.hp2 HG03486.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0117 a0001c0004t0001g0179 a0001c0004t0001g0117 a0001c0004t0001g0179	2	438	0.0046	21	c.-30 others(30): Show c.-306_-305insCCCCCGCTCCCCCCGCCCCCC	LOXL4	ENSG00000138131.4	transcript	ENST00000260702.4	protein_coding		211		chr10	TogoVar
LPAR1_chr9_110868263_111043470	111005184	G G	GCTCTAAT others(14): Show GCTCTAATCTCATTTCATTTCT	intron_variant intron_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0258 a0001c0001t0005g0258	1	302	0.0033	21	c.-18 others(42): Show c.-182+30917_-182+30937dupAGAAATGAAATGAGATTAGAG	LPAR1	ENSG00000198121.15	transcript	ENST00000683809.1	protein_coding	2/5			chr9	TogoVar
LPA_chr6_160526482_160669275	160584237	T T	TTCTTCTT others(14): Show TTCTTCTTCTTCTTCTTCCTCC	intron_variant intron_variant	MODIFIER	HG02165.hp1 HG02165.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0102 a0002c0002t0001g0102	1	148	0.0068	21	c.428 others(38): Show c.4289+808_4289+809insGGAGGAAGAAGAAGAAGAAGA	LPA	ENSG00000198670.13	transcript	ENST00000316300.10	protein_coding	26/38			chr6	TogoVar
LPCAT4_chr15_34353633_34372196	34371824	A A	AGAGAGAG others(14): Show AGAGAGAGAGAGAGAGAGAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02523.hp2 HG02523.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	1	450	0.0022	21	c.-47 others(32): Show c.-4725_-4724insCTCTCTCTCTCTCTCTCTCTC	LPCAT4	ENSG00000176454.15	transcript	ENST00000314891.11	protein_coding		4629		chr15	TogoVar
LPGAT1_chr1_211738457_211835763	211800035	T T	TTTATTAT others(14): Show TTTATTATTATTATTATTATTA	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00544.hp1 HG00597.hp2 others(30): Show HG00423.hp2 HG00544.hp1 HG00597.hp2 HG00609.hp1 HG01255.hp2 HG01261.hp1 HG01943.hp1 HG01952.hp2 HG01975.hp1 HG01993.hp1 HG02027.hp2 HG02293.hp2 HG02523.hp2 NA18747.hp2 NA18939.hp2 NA18950.hp1 NA18951.hp1 NA18966.hp1 NA18972.hp2 NA18986.hp2 NA18998.hp2 NA19003.hp2 NA19004.hp2 NA19005.hp1 NA19009.hp1 NA19054.hp1 NA19065.hp1 NA19066.hp1 NA19067.hp1 NA19077.hp1 NA19079.hp1 NA19081.hp2 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0009 a0001c0001t0014 others(1): Show a0001c0001t0004 a0001c0001t0009 a0001c0001t0014 a0001c0001t0032	a0001c0001t0004g0001 a0001c0001t0004g0007 a0001c0001t0004g0022 others(21): Show a0001c0001t0004g0001 a0001c0001t0004g0007 a0001c0001t0004g0022 a0001c0001t0004g0286 a0001c0001t0004g0287 a0001c0001t0004g0288 a0001c0001t0004g0289 a0001c0001t0004g0290 a0001c0001t0004g0291 a0001c0001t0004g0292 a0001c0001t0004g0293 a0001c0001t0004g0294 a0001c0001t0004g0295 a0001c0001t0004g0296 a0001c0001t0004g0298 a0001c0001t0004g0300 a0001c0001t0009g0010 a0001c0001t0009g0084 a0001c0001t0009g0085 a0001c0001t0009g0087 a0001c0001t0014g0285 a0001c0001t0014g0297 a0001c0001t0014g0299 a0001c0001t0032g0086	33	332	0.0994	21	c.239 others(38): Show c.239-6846_239-6845insTAATAATAATAATAATAATAA	LPGAT1	ENSG00000123684.13	transcript	ENST00000366997.9	protein_coding	2/7			chr1	TogoVar
LPIN1_chr2_11741632_11832409	11752433	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0070 a0001c0001t0005g0070	1	278	0.0036	21	c.-10 others(38): Show c.-10+5778_-10+5779insTTTTTTTTTTTTTTTTTTTTT	LPIN1	ENSG00000134324.12	transcript	ENST00000674199.1	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr2	TogoVar
LPIN1_chr2_11741632_11832409	11787392	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0030 a0001c0002t0030	a0001c0002t0030g0007 a0001c0002t0030g0007	1	278	0.0036	21	c.164 others(38): Show c.1643+230_1643+231insTTTTTTTTTTTTTTTTTTTTT	LPIN1	ENSG00000134324.12	transcript	ENST00000674199.1	protein_coding	11/20		INFO_REALIGN_3_PRIME	chr2	TogoVar
LPIN2_chr18_2911999_3018144	2958141	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18993.hp1 NA18993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0066 a0001c0001t0002g0066	1	380	0.0026	21	c.192 others(38): Show c.192+2507_192+2508insTTTTTTTTTTTTTTTTTTTTT	LPIN2	ENSG00000101577.11	transcript	ENST00000677752.1	protein_coding	2/19			chr18	TogoVar
LPIN3_chr20_41335821_41365582	41361519	G G	GCTGAAGT others(14): Show GCTGAAGTTTCTGGGCTGTGTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	404	0.0025	21	c.26 others(32): Show c.2653_*2654insCTGAAGTTTCTGGGCTGTGTC	LPIN3	ENSG00000132793.12	transcript	ENST00000373257.8	protein_coding		938		chr20	TogoVar
LPL_chr8_19934253_19972259	19959777	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03209.hp2 NA20300.hp2 HG03209.hp2 NA20300.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0008 a0001c0007t0008	a0001c0007t0008g0024 a0001c0007t0008g0024	2	384	0.0052	21	c.113 others(38): Show c.1139+406_1139+426dupTTTTTTTTTTTTTTTTTTTTT	LPL	ENSG00000175445.17	transcript	ENST00000650287.1	protein_coding	7/9		INFO_REALIGN_3_PRIME	chr8	TogoVar
LPP_chr3_188149157_188895671	188276889	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0033 a0002c0004t0033	a0002c0004t0033g0062 a0002c0004t0033g0062	1	76	0.0132	21	c.-67 others(40): Show c.-67+51366_-67+51367insTTTTTTTTTTTTTTTTTTTTT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188318753	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0010 a0001c0002t0010	a0001c0002t0010g0025 a0001c0002t0010g0025	1	76	0.0132	21	c.-66 others(40): Show c.-66-22907_-66-22887dupTTTTTTTTTTTTTTTTTTTTT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188346251	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0004 a0002c0003t0002g0004	1	76	0.0132	21	c.-10 others(38): Show c.-10+4538_-10+4558dupTTTTTTTTTTTTTTTTTTTTT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188485796	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG02622.hp2 HG03834.hp2 HG01175.hp2 HG02622.hp2 HG03834.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0008 a0001c0001t0049 a0001c0005t0063 a0001c0001t0008 a0001c0001t0049 a0001c0005t0063	a0001c0001t0008g0065 a0001c0001t0049g0031 a0001c0005t0063g0022 a0001c0001t0008g0065 a0001c0001t0049g0031 a0001c0005t0063g0022	3	76	0.0395	21	c.306 others(38): Show c.306+1110_306+1111insAAAAAAAAAAAAAAAAAAAAA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188495082	A A	ATATATAT others(14): Show ATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0054 a0001c0002t0054	a0001c0002t0054g0018 a0001c0002t0054g0018	1	76	0.0132	21	c.306 others(40): Show c.306+10379_306+10380insATATATATATATATATATATT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188592563	T T	TTTTTTTT others(14): Show TTTTTTTTTTTTTTTTTTTTGG	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG02622.hp2 HG02738.hp2 HG01167.hp2 HG02622.hp2 HG02738.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0008 a0001c0001t0018 a0001c0006t0066 a0001c0001t0008 a0001c0001t0018 a0001c0006t0066	a0001c0001t0008g0065 a0001c0001t0018g0072 a0001c0006t0066g0021 a0001c0001t0008g0065 a0001c0001t0018g0072 a0001c0006t0066g0021	3	76	0.0395	21	c.430 others(40): Show c.430-16598_430-16597insTTTTTTTTTTTTTTTTTTTGG	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	6/11			chr3	TogoVar
LPP_chr3_188149157_188895671	188657258	G G	GATATATA others(14): Show GATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0061 a0001c0001t0061	a0001c0001t0061g0023 a0001c0001t0061g0023	1	76	0.0132	21	c.111 others(42): Show c.1113+47414_1113+47415insATATATATATATATATATATA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	7/11			chr3	TogoVar
LPP_chr3_188149157_188895671	188657281	T T	TATATATA others(14): Show TATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0009 a0002c0003t0009	a0002c0003t0009g0070 a0002c0003t0009g0070	1	76	0.0132	21	c.111 others(42): Show c.1113+47437_1113+47438insATATATATATATATATATATA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	7/11			chr3	TogoVar
LPP_chr3_188149157_188895671	188881139	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01074.hp2 HG01167.hp1 HG01175.hp2 others(6): Show HG01074.hp2 HG01167.hp1 HG01175.hp2 HG01978.hp1 HG02622.hp2 HG02738.hp1 HG02738.hp2 HG02886.hp1 HG03453.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0005 a0001c0006 others(3): Show a0001c0001 a0001c0005 a0001c0006 a0002c0003 a0002c0004 a0004c0010	a0001c0001t0008 a0001c0005t0040 a0001c0005t0063 others(6): Show a0001c0001t0008 a0001c0005t0040 a0001c0005t0063 a0001c0006t0034 a0001c0006t0041 a0001c0006t0066 a0002c0003t0029 a0002c0004t0033 a0004c0010t0035	a0001c0001t0008g0065 a0001c0005t0040g0030 a0001c0005t0063g0022 others(6): Show a0001c0001t0008g0065 a0001c0005t0040g0030 a0001c0005t0063g0022 a0001c0006t0034g0039 a0001c0006t0041g0002 a0001c0006t0066g0021 a0002c0003t0029g0059 a0002c0004t0033g0062 a0004c0010t0035g0060	9	76	0.1184	21	c.66 others(32): Show c.6679_*6680insAAAAAAAAAAAAAAAAAAAAA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	12/12	6680	INFO_REALIGN_3_PRIME	chr3	TogoVar
LRBA_chr4_150259435_151020284	150443853	A A	AAATATAT others(14): Show AAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00738.hp2 NA19004.hp2 HG00738.hp2 NA19004.hp2	a0003 a0003	a0003c0004 a0003c0023 a0003c0004 a0003c0023	a0003c0004t0003 a0003c0023t0003 a0003c0004t0003 a0003c0023t0003	a0003c0004t0003g0156 a0003c0023t0003g0069 a0003c0004t0003g0156 a0003c0023t0003g0069	2	180	0.0111	21	c.678 others(40): Show c.6781-6990_6781-6989insATATATATATATATATATATT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	44/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150489589	T T	TATTATAT others(14): Show TATTATATATAAGAATATATAA	intron_variant intron_variant	MODIFIER	NA18952.hp1 NA18952.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0108 a0001c0001t0001g0108	1	180	0.0056	21	c.644 others(40): Show c.6448+1328_6448+1329insTTATATATTCTTATATATAAT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	41/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150555787	A A	ACACACAC others(14): Show ACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA18978.hp2 NA18978.hp2	a0020 a0020	a0020c0024 a0020c0024	a0020c0024t0002 a0020c0024t0002	a0020c0024t0002g0042 a0020c0024t0002g0042	1	180	0.0056	21	c.633 others(42): Show c.6330+32260_6330+32261insGTGTGTGTGTGTGTGTGTGTG	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	40/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150648158	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01891.hp2 HG02109.hp2 others(10): Show HG00423.hp2 HG01891.hp2 HG02109.hp2 HG02165.hp2 HG03225.hp1 HG03654.hp2 HG04115.hp1 NA18612.hp1 NA18939.hp1 NA18948.hp2 NA18984.hp1 NA18994.hp2 NA19079.hp2	a0001 a0003 a0004 others(3): Show a0001 a0003 a0004 a0006 a0007 a0009	a0001c0001 a0001c0005 a0003c0004 others(5): Show a0001c0001 a0001c0005 a0003c0004 a0003c0012 a0004c0006 a0006c0008 a0007c0016 a0009c0009	a0001c0001t0001 a0001c0005t0001 a0003c0004t0003 others(6): Show a0001c0001t0001 a0001c0005t0001 a0003c0004t0003 a0003c0012t0003 a0004c0006t0003 a0006c0008t0001 a0006c0008t0002 a0007c0016t0003 a0009c0009t0003	a0001c0001t0001g0075 a0001c0001t0001g0086 a0001c0001t0001g0094 others(10): Show a0001c0001t0001g0075 a0001c0001t0001g0086 a0001c0001t0001g0094 a0001c0005t0001g0160 a0001c0005t0001g0163 a0003c0004t0003g0155 a0003c0012t0003g0089 a0004c0006t0003g0128 a0004c0006t0003g0142 a0006c0008t0001g0113 a0006c0008t0002g0116 a0007c0016t0003g0127 a0009c0009t0003g0008	13	180	0.0722	21	c.592 others(42): Show c.5921+35392_5921+35393insTTTTTTTTTTTTTTTTTTTTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150658505	G G	GTCTCCTC others(14): Show GTCTCCTCCCTCTCCCTCTCCC	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0031 a0001c0001t0002g0031	1	180	0.0056	21	c.592 others(42): Show c.5921+25045_5921+25046insGGGAGAGGGAGAGGGAGGAGA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150658752	T T	TCTCCCTC others(14): Show TCTCCCTCTCCCTCTCCCTCTC	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0120 a0001c0001t0001g0120	1	180	0.0056	21	c.592 others(42): Show c.5921+24778_5921+24798dupGAGAGGGAGAGGGAGAGGGAG	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150685420	A A	ATATATAT others(14): Show ATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02165.hp2 HG02165.hp2	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0003 a0004c0006t0003	a0004c0006t0003g0142 a0004c0006t0003g0142	1	180	0.0056	21	c.575 others(40): Show c.5755-1704_5755-1703insATATATATATATATATATATA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	36/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150685420	A A	ATATATAT others(14): Show ATATATATATATATATATTTTT	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG02155.hp2 HG01934.hp1 HG02155.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0002 a0002c0003t0001 a0001c0001t0002 a0002c0003t0001	a0001c0001t0002g0032 a0002c0003t0001g0140 a0001c0001t0002g0032 a0002c0003t0001g0140	2	180	0.0111	21	c.575 others(40): Show c.5755-1704_5755-1703insAAAAATATATATATATATATA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	36/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150685420	A A	ATATATAT others(14): Show ATATATATATATATATTTTTTT	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG01099.hp2 HG00423.hp1 HG01099.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0139 a0002c0003t0001g0144 a0002c0003t0001g0139 a0002c0003t0001g0144	2	180	0.0111	21	c.575 others(40): Show c.5755-1704_5755-1703insAAAAAAATATATATATATATA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	36/56			chr4	TogoVar

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