Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PCDHA9_chr5_140843382_141017347	140941191	T T	TTTTTCTT others(14): Show TTTTTCTTTCTTCCTTTCTTTC	intron_variant intron_variant	MODIFIER	NA19075.hp1 NA19075.hp1	a0002 a0002	a0002c0019 a0002c0019	a0002c0019t0002 a0002c0019t0002	a0002c0019t0002g0090 a0002c0019t0002g0090	1	256	0.0039	21	c.239 others(42): Show c.2395-37755_2395-37754insTCTTTCTTCCTTTCTTTCTTT	PCDHA9	ENSG00000204961.7	transcript	ENST00000532602.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHAC1_chr5_140921299_141017347	140941191	T T	TTTTTCTT others(14): Show TTTTTCTTTCTTCCTTTCTTTC	intron_variant intron_variant	MODIFIER	NA19075.hp1 NA19075.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0004 a0002c0001t0004	a0002c0001t0004g0097 a0002c0001t0004g0097	1	280	0.0036	21	c.243 others(42): Show c.2433+11869_2433+11870insTCTTTCTTCCTTTCTTTCTTT	PCDHAC1	ENSG00000248383.5	transcript	ENST00000253807.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHB10_chr5_141187353_141200647	141190658	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19000.hp1 NA19090.hp1 NA19000.hp1 NA19090.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0000 a0002c0002t0001g0000	2	456	0.0044	21	c.-18 others(32): Show c.-1895_-1894insAAAAAAAAAAAAAAAAAAAAA	PCDHB10	ENSG00000120324.9	transcript	ENST00000239446.6	protein_coding		1694		chr5	TogoVar
PCDHB16_chr5_141177387_141191226	141190658	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19000.hp2 NA19090.hp1 NA19000.hp2 NA19090.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0000 a0002c0002t0001g0000	2	452	0.0044	21	c.57 others(32): Show c.5768_*5769insAAAAAAAAAAAAAAAAAAAAA	PCDHB16	ENSG00000272674.4	transcript	ENST00000609684.3	protein_coding		4433		chr5	TogoVar
PCDHB9_chr5_141182161_141196541	141190658	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19000.hp1 NA19090.hp2 NA19000.hp1 NA19090.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0030 a0002c0001t0030	a0002c0001t0030g0000 a0002c0001t0030g0000	2	458	0.0044	21	c.96 others(30): Show c.962_*963insAAAAAAAAAAAAAAAAAAAAA	PCDHB9	ENSG00000177839.7	transcript	ENST00000316105.7	protein_coding	1/1	963	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA10_chr5_141407987_141517975	141410849	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0199 a0001c0001t0001g0199	1	306	0.0033	21	c.-23 others(32): Show c.-2327_-2326insTTTTTTTTTTTTTTTTTTTTT	PCDHGA10	ENSG00000253846.3	transcript	ENST00000398610.3	protein_coding		2137		chr5	TogoVar
PCDHGA10_chr5_141407987_141517975	141454796	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	306	0.0033	21	c.243 others(42): Show c.2436+39194_2436+39214dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA10	ENSG00000253846.3	transcript	ENST00000398610.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA11_chr5_141416051_141517975	141454796	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0056 a0001c0003t0004g0056	1	310	0.0032	21	c.243 others(42): Show c.2433+31145_2433+31165dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA11	ENSG00000253873.6	transcript	ENST00000398587.7	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA12_chr5_141425507_141517975	141454796	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0156 a0001c0001t0001g0156	1	318	0.0031	21	c.242 others(42): Show c.2424+21622_2424+21642dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA12	ENSG00000253159.3	transcript	ENST00000252085.4	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA1_chr5_141325514_141517975	141376676	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0034 a0001c0002t0001g0034	1	268	0.0037	21	c.242 others(42): Show c.2421+43572_2421+43592dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA1	ENSG00000204956.6	transcript	ENST00000517417.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA1_chr5_141325514_141517975	141379889	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG02015.hp2 HG00099.hp2 HG02015.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0005 a0001c0001 a0004c0005	a0001c0001t0002 a0004c0005t0004 a0001c0001t0002 a0004c0005t0004	a0001c0001t0002g0054 a0004c0005t0004g0033 a0001c0001t0002g0054 a0004c0005t0004g0033	2	268	0.0075	21	c.242 others(42): Show c.2421+46794_2421+46814dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA1	ENSG00000204956.6	transcript	ENST00000517417.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA1_chr5_141325514_141517975	141410849	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0083 a0001c0001t0001g0083	1	268	0.0037	21	c.242 others(42): Show c.2421+77746_2421+77766dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA1	ENSG00000204956.6	transcript	ENST00000517417.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA1_chr5_141325514_141517975	141454796	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0242 a0003c0004t0001g0242	1	268	0.0037	21	c.242 others(42): Show c.2422-40002_2422-39982dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA1	ENSG00000204956.6	transcript	ENST00000517417.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA2_chr5_141333760_141517975	141376676	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0110 a0001c0001t0001g0110	1	272	0.0037	21	c.242 others(42): Show c.2424+35282_2424+35302dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA2	ENSG00000081853.15	transcript	ENST00000394576.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA2_chr5_141333760_141517975	141379889	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG02015.hp2 HG00099.hp2 HG02015.hp2	a0001 a0001	a0001c0004 a0001c0022 a0001c0004 a0001c0022	a0001c0004t0002 a0001c0022t0005 a0001c0004t0002 a0001c0022t0005	a0001c0004t0002g0006 a0001c0022t0005g0181 a0001c0004t0002g0006 a0001c0022t0005g0181	2	272	0.0074	21	c.242 others(42): Show c.2424+38504_2424+38524dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA2	ENSG00000081853.15	transcript	ENST00000394576.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA2_chr5_141333760_141517975	141410849	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0001 a0001c0010t0001	a0001c0010t0001g0270 a0001c0010t0001g0270	1	272	0.0037	21	c.242 others(42): Show c.2424+69456_2424+69476dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA2	ENSG00000081853.15	transcript	ENST00000394576.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA2_chr5_141333760_141517975	141454796	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0121 a0001c0001t0001g0121	1	272	0.0037	21	c.242 others(42): Show c.2425-40002_2425-39982dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA2	ENSG00000081853.15	transcript	ENST00000394576.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA3_chr5_141338829_141517975	141376676	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0008 a0008	a0008c0012 a0008c0012	a0008c0012t0001 a0008c0012t0001	a0008c0012t0001g0049 a0008c0012t0001g0049	1	270	0.0037	21	c.242 others(42): Show c.2424+30220_2424+30240dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA3	ENSG00000254245.3	transcript	ENST00000253812.8	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA3_chr5_141338829_141517975	141379889	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG02015.hp2 HG00099.hp2 HG02015.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0001 a0001c0001t0005g0229 a0001c0001t0002g0001 a0001c0001t0005g0229	2	270	0.0074	21	c.242 others(42): Show c.2424+33442_2424+33462dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA3	ENSG00000254245.3	transcript	ENST00000253812.8	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA3_chr5_141338829_141517975	141410849	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0171 a0002c0002t0001g0171	1	270	0.0037	21	c.242 others(42): Show c.2424+64394_2424+64414dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA3	ENSG00000254245.3	transcript	ENST00000253812.8	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA3_chr5_141338829_141517975	141454796	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0040 a0003c0003t0001g0040	1	270	0.0037	21	c.242 others(42): Show c.2425-40002_2425-39982dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA3	ENSG00000254245.3	transcript	ENST00000253812.8	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA4_chr5_141350021_141517975	141376676	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0008 a0008	a0008c0009 a0008c0009	a0008c0009t0001 a0008c0009t0001	a0008c0009t0001g0228 a0008c0009t0001g0228	1	274	0.0037	21	c.251 others(42): Show c.2514+19056_2514+19076dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA4	ENSG00000262576.3	transcript	ENST00000571252.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA4_chr5_141350021_141517975	141379889	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG02015.hp1 HG00099.hp1 HG02015.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0005 a0003c0003t0002 a0003c0003t0005	a0003c0003t0002g0042 a0003c0003t0005g0096 a0003c0003t0002g0042 a0003c0003t0005g0096	2	274	0.0073	21	c.251 others(42): Show c.2514+22278_2514+22298dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA4	ENSG00000262576.3	transcript	ENST00000571252.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA4_chr5_141350021_141517975	141410849	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0095 a0001c0001t0001g0095	1	274	0.0037	21	c.251 others(42): Show c.2514+53230_2514+53250dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA4	ENSG00000262576.3	transcript	ENST00000571252.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA4_chr5_141350021_141517975	141454796	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0241 a0002c0002t0001g0241	1	274	0.0037	21	c.251 others(42): Show c.2515-40002_2515-39982dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA4	ENSG00000262576.3	transcript	ENST00000571252.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA5_chr5_141359162_141517975	141376676	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0130 a0001c0003t0001g0130	1	292	0.0034	21	c.242 others(40): Show c.2421+9926_2421+9946dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA5	ENSG00000253485.3	transcript	ENST00000518069.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA5_chr5_141359162_141517975	141379889	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG02015.hp1 HG00099.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0009 a0001c0001t0005g0090 a0001c0001t0002g0009 a0001c0001t0005g0090	2	292	0.0069	21	c.242 others(42): Show c.2421+13148_2421+13168dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA5	ENSG00000253485.3	transcript	ENST00000518069.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA5_chr5_141359162_141517975	141410849	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0089 a0001c0001t0001g0089	1	292	0.0034	21	c.242 others(42): Show c.2421+44100_2421+44120dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA5	ENSG00000253485.3	transcript	ENST00000518069.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA5_chr5_141359162_141517975	141454796	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0120 a0001c0002t0001g0120	1	292	0.0034	21	c.242 others(42): Show c.2422-40002_2422-39982dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA5	ENSG00000253485.3	transcript	ENST00000518069.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA6_chr5_141368891_141517975	141376676	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0288 a0001c0001t0001g0288	1	292	0.0034	21	c.242 others(38): Show c.2424+170_2424+190dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA6	ENSG00000253731.3	transcript	ENST00000517434.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA6_chr5_141368891_141517975	141379889	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG02015.hp1 HG00099.hp2 HG02015.hp1	a0001 a0001	a0001c0005 a0001c0021 a0001c0005 a0001c0021	a0001c0005t0002 a0001c0021t0005 a0001c0005t0002 a0001c0021t0005	a0001c0005t0002g0056 a0001c0021t0005g0055 a0001c0005t0002g0056 a0001c0021t0005g0055	2	292	0.0069	21	c.242 others(40): Show c.2424+3392_2424+3412dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA6	ENSG00000253731.3	transcript	ENST00000517434.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA6_chr5_141368891_141517975	141410849	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0178 a0001c0001t0001g0178	1	292	0.0034	21	c.242 others(42): Show c.2424+34344_2424+34364dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA6	ENSG00000253731.3	transcript	ENST00000517434.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA6_chr5_141368891_141517975	141454796	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0271 a0001c0002t0001g0271	1	292	0.0034	21	c.242 others(42): Show c.2425-40002_2425-39982dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA6	ENSG00000253731.3	transcript	ENST00000517434.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA7_chr5_141377742_141517975	141379889	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG02015.hp2 HG00099.hp2 HG02015.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0162 a0001c0001t0005g0166 a0001c0001t0002g0162 a0001c0001t0005g0166	2	292	0.0069	21	c.-30 others(32): Show c.-3011_-3010insTTTTTTTTTTTTTTTTTTTTT	PCDHGA7	ENSG00000253537.3	transcript	ENST00000518325.2	protein_coding		2852		chr5	TogoVar
PCDHGA7_chr5_141377742_141517975	141410849	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0007 a0002c0002t0007	a0002c0002t0007g0226 a0002c0002t0007g0226	1	292	0.0034	21	c.242 others(42): Show c.2424+25528_2424+25548dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA7	ENSG00000253537.3	transcript	ENST00000518325.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA7_chr5_141377742_141517975	141454796	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0173 a0001c0001t0001g0173	1	292	0.0034	21	c.242 others(42): Show c.2425-40002_2425-39982dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA7	ENSG00000253537.3	transcript	ENST00000518325.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA8_chr5_141387633_141517975	141410849	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0057 a0001c0001t0001g0057	1	302	0.0033	21	c.242 others(42): Show c.2424+15614_2424+15634dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA8	ENSG00000253767.3	transcript	ENST00000398604.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA8_chr5_141387633_141517975	141454796	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0028 a0001c0001t0001g0028	1	302	0.0033	21	c.242 others(42): Show c.2425-40002_2425-39982dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA8	ENSG00000253767.3	transcript	ENST00000398604.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA9_chr5_141397778_141517975	141410849	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0002 a0002	a0002c0008 a0002c0008	a0002c0008t0001 a0002c0008t0001	a0002c0008t0001g0189 a0002c0008t0001g0189	1	302	0.0033	21	c.242 others(40): Show c.2424+5475_2424+5495dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA9	ENSG00000261934.3	transcript	ENST00000573521.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA9_chr5_141397778_141517975	141454796	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0274 a0001c0005t0001g0274	1	302	0.0033	21	c.242 others(42): Show c.2425-40002_2425-39982dupTTTTTTTTTTTTTTTTTTTTT	PCDHGA9	ENSG00000261934.3	transcript	ENST00000573521.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB1_chr5_141345099_141517975	141376676	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0005 a0005	a0005c0011 a0005c0011	a0005c0011t0001 a0005c0011t0001	a0005c0011t0001g0269 a0005c0011t0001g0269	1	278	0.0036	21	c.240 others(42): Show c.2409+24008_2409+24028dupTTTTTTTTTTTTTTTTTTTTT	PCDHGB1	ENSG00000254221.3	transcript	ENST00000523390.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB1_chr5_141345099_141517975	141379889	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG02015.hp1 HG00099.hp2 HG02015.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0005 a0001c0003t0003 a0001c0003t0005	a0001c0003t0003g0078 a0001c0003t0005g0088 a0001c0003t0003g0078 a0001c0003t0005g0088	2	278	0.0072	21	c.240 others(42): Show c.2409+27230_2409+27250dupTTTTTTTTTTTTTTTTTTTTT	PCDHGB1	ENSG00000254221.3	transcript	ENST00000523390.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB1_chr5_141345099_141517975	141410849	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0156 a0001c0001t0001g0156	1	278	0.0036	21	c.240 others(42): Show c.2409+58182_2409+58202dupTTTTTTTTTTTTTTTTTTTTT	PCDHGB1	ENSG00000254221.3	transcript	ENST00000523390.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB1_chr5_141345099_141517975	141454796	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0024 a0002c0004t0001g0024	1	278	0.0036	21	c.241 others(42): Show c.2410-40002_2410-39982dupTTTTTTTTTTTTTTTTTTTTT	PCDHGB1	ENSG00000254221.3	transcript	ENST00000523390.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB2_chr5_141354994_141517975	141376676	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0003 a0003	a0003c0010 a0003c0010	a0003c0010t0001 a0003c0010t0001	a0003c0010t0001g0254 a0003c0010t0001g0254	1	288	0.0035	21	c.242 others(42): Show c.2421+14121_2421+14141dupTTTTTTTTTTTTTTTTTTTTT	PCDHGB2	ENSG00000253910.3	transcript	ENST00000522605.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB2_chr5_141354994_141517975	141379889	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG02015.hp1 HG00099.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0013 a0001c0001t0005g0081 a0001c0001t0002g0013 a0001c0001t0005g0081	2	288	0.0069	21	c.242 others(42): Show c.2421+17343_2421+17363dupTTTTTTTTTTTTTTTTTTTTT	PCDHGB2	ENSG00000253910.3	transcript	ENST00000522605.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB2_chr5_141354994_141517975	141410849	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0080 a0001c0001t0001g0080	1	288	0.0035	21	c.242 others(42): Show c.2421+48295_2421+48315dupTTTTTTTTTTTTTTTTTTTTT	PCDHGB2	ENSG00000253910.3	transcript	ENST00000522605.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB2_chr5_141354994_141517975	141454796	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0270 a0003c0003t0001g0270	1	288	0.0035	21	c.242 others(42): Show c.2422-40002_2422-39982dupTTTTTTTTTTTTTTTTTTTTT	PCDHGB2	ENSG00000253910.3	transcript	ENST00000522605.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB3_chr5_141365242_141517975	141376676	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0001 a0001c0011t0001	a0001c0011t0001g0270 a0001c0011t0001g0270	1	296	0.0034	21	c.241 others(40): Show c.2415+3868_2415+3888dupTTTTTTTTTTTTTTTTTTTTT	PCDHGB3	ENSG00000262209.3	transcript	ENST00000576222.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGB3_chr5_141365242_141517975	141379889	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG02015.hp1 HG00099.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0035 a0001c0001t0005g0221 a0001c0001t0002g0035 a0001c0001t0005g0221	2	296	0.0068	21	c.241 others(40): Show c.2415+7090_2415+7110dupTTTTTTTTTTTTTTTTTTTTT	PCDHGB3	ENSG00000262209.3	transcript	ENST00000576222.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar

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