Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SLC30A10_chr1_219905445_219933557	219925651	A A	ATATATAT others(14): Show ATATATATATATATTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01261.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0164 a0001c0001t0004g0164	1	426	0.0024	21	c.718 others(38): Show c.718+1376_718+1377insAAAAAAAAATATATATATATA	SLC30A10	ENSG00000196660.12	transcript	ENST00000366926.4	protein_coding	2/3			chr1	TogoVar
SLC30A10_chr1_219905445_219933557	219925652	T T	TATATATA others(14): Show TATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG01978.hp2 HG03710.hp2 others(2): Show HG01516.hp1 HG01978.hp2 HG03710.hp2 NA18998.hp1 NA18999.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0025 a0001c0001t0050 others(2): Show a0001c0001t0012 a0001c0001t0025 a0001c0001t0050 a0001c0001t0074 a0001c0001t0105	a0001c0001t0012g0053 a0001c0001t0025g0049 a0001c0001t0050g0117 others(2): Show a0001c0001t0012g0053 a0001c0001t0025g0049 a0001c0001t0050g0117 a0001c0001t0074g0097 a0001c0001t0105g0128	5	426	0.0117	21	c.718 others(38): Show c.718+1375_718+1376insTATATATATATATATATATAT	SLC30A10	ENSG00000196660.12	transcript	ENST00000366926.4	protein_coding	2/3			chr1	TogoVar
SLC30A5_chr5_69089014_69136069	69125870	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG01109.hp1 HG01884.hp1 others(13): Show HG00408.hp1 HG01109.hp1 HG01884.hp1 HG01934.hp1 HG02970.hp2 HG03579.hp2 NA18940.hp2 NA18954.hp1 NA18960.hp1 NA18963.hp1 NA18971.hp1 NA18989.hp2 NA19002.hp2 NA19064.hp1 NA19075.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0004t0004	a0001c0001t0002g0009 a0001c0001t0002g0061 a0001c0001t0002g0093 others(10): Show a0001c0001t0002g0009 a0001c0001t0002g0061 a0001c0001t0002g0093 a0001c0001t0002g0177 a0001c0001t0003g0011 a0001c0001t0003g0104 a0001c0001t0003g0105 a0001c0001t0003g0183 a0001c0001t0003g0310 a0001c0001t0003g0339 a0001c0001t0005g0207 a0001c0001t0005g0214 a0001c0004t0004g0013	16	408	0.0392	21	c.199 others(40): Show c.1999-2128_1999-2108dupAAAAAAAAAAAAAAAAAAAAA	SLC30A5	ENSG00000145740.20	transcript	ENST00000396591.8	protein_coding	14/15		INFO_REALIGN_3_PRIME	chr5	TogoVar
SLC30A6_chr2_32160864_32229379	32212894	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03209.hp1 NA18906.hp2 HG03209.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0304 a0001c0001t0009g0305 a0001c0001t0009g0304 a0001c0001t0009g0305	2	376	0.0053	21	c.885 others(38): Show c.885+3340_885+3360dupTTTTTTTTTTTTTTTTTTTTT	SLC30A6	ENSG00000152683.14	transcript	ENST00000282587.9	protein_coding	13/13		INFO_REALIGN_3_PRIME	chr2	TogoVar
SLC33A1_chr3_155816024_155859427	155836280	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0054 a0002c0002t0054	a0002c0002t0054g0330 a0002c0002t0054g0330	1	392	0.0026	21	c.964 others(38): Show c.964-2260_964-2240dupTTTTTTTTTTTTTTTTTTTTT	SLC33A1	ENSG00000169359.16	transcript	ENST00000643144.2	protein_coding	2/5			chr3	TogoVar
SLC35B3_chr6_8406435_8440545	8409469	A A	ATATATAT others(14): Show ATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00544.hp1 HG00544.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0070 a0001c0001t0001g0070	1	412	0.0024	21	c.40 others(32): Show c.4079_*4080insATATATATATATATATATATA	SLC35B3	ENSG00000124786.13	transcript	ENST00000710437.1	protein_coding		1965		chr6	TogoVar
SLC35D2_chr9_96315710_96388711	96324549	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG03139.hp1 HG04204.hp1 HG00621.hp1 HG03139.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0079 a0001c0001t0001g0155 a0001c0001t0001g0183 a0001c0001t0001g0079 a0001c0001t0001g0155 a0001c0001t0001g0183	3	284	0.0106	21	c.753 others(36): Show c.753-381_753-380insAAAAAAAAAAAAAAAAAAAAA	SLC35D2	ENSG00000130958.13	transcript	ENST00000253270.13	protein_coding	9/11			chr9	TogoVar
SLC35D2_chr9_96315710_96388711	96358080	T T	TATATATA others(14): Show TATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0235 a0001c0001t0001g0235	1	284	0.0035	21	c.347 others(38): Show c.347+2073_347+2074insTATATATATATATATATATAT	SLC35D2	ENSG00000130958.13	transcript	ENST00000253270.13	protein_coding	4/11			chr9	TogoVar
SLC35D2_chr9_96315710_96388711	96371474	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0136 a0001c0001t0001g0136	1	284	0.0035	21	c.159 others(38): Show c.159-3190_159-3170dupTTTTTTTTTTTTTTTTTTTTT	SLC35D2	ENSG00000130958.13	transcript	ENST00000253270.13	protein_coding	1/11			chr9	TogoVar
SLC35E2B_chr1_1656478_1697795	1683704	C C	CCCCTACC others(14): Show CCCCTACCCCCGCTCTCCAGGG	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00423.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0011 a0002c0002t0011	a0002c0002t0011g0148 a0002c0002t0011g0148	1	348	0.0029	21	c.-14 others(40): Show c.-147-6879_-147-6859dupCCCTGGAGAGCGGGGGTAGGG	SLC35E2B	ENSG00000189339.12	transcript	ENST00000617444.5	protein_coding	2/9			chr1	TogoVar
SLC35E3_chr12_68741176_68786468	68776212	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00099.hp2 HG00323.hp2 HG00408.hp1 others(64): Show HG00099.hp2 HG00323.hp2 HG00408.hp1 HG00558.hp2 HG01070.hp1 HG01099.hp2 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01192.hp1 HG01257.hp2 HG01515.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01975.hp2 HG01993.hp1 HG02015.hp1 HG02040.hp2 HG02080.hp1 HG02083.hp1 HG02132.hp1 HG02132.hp2 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02738.hp2 HG02895.hp1 HG02922.hp2 HG03491.hp1 HG03491.hp2 HG03669.hp1 HG03834.hp2 HG04199.hp2 HG04204.hp2 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp2 NA18949.hp2 NA18954.hp2 NA18961.hp1 NA18962.hp2 NA18963.hp1 NA18966.hp1 NA18969.hp1 NA18973.hp2 NA18981.hp2 NA18982.hp2 NA18984.hp2 NA18992.hp1 NA18998.hp2 NA19005.hp2 NA19056.hp1 NA19057.hp2 NA19060.hp1 NA19062.hp1 NA19065.hp1 NA19068.hp2 NA19074.hp1 NA19077.hp2 NA19084.hp1 NA19086.hp2 NA19087.hp2 NA19091.hp2 NA20300.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0002 a0001c0001 a0003c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0010 others(35): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0010 a0001c0001t0016 a0001c0001t0017 a0001c0001t0027 a0001c0001t0028 a0001c0001t0057 a0001c0001t0059 a0001c0001t0067 a0001c0001t0076 a0001c0001t0106 a0001c0001t0109 a0001c0001t0126 a0001c0001t0127 a0001c0001t0162 a0001c0001t0222 a0001c0001t0236 a0001c0001t0249 a0001c0001t0252 a0001c0001t0255 a0001c0001t0260 a0001c0001t0261 a0001c0001t0264 a0001c0001t0267 a0001c0001t0273 a0001c0001t0278 a0001c0001t0282 a0001c0001t0283 a0001c0001t0285 a0001c0001t0287 a0001c0001t0288 a0001c0001t0289 a0001c0001t0291 a0001c0001t0293 a0001c0001t0294 a0001c0001t0295 a0003c0002t0001	a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0054 others(53): Show a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0054 a0001c0001t0001g0079 a0001c0001t0001g0082 a0001c0001t0001g0089 a0001c0001t0001g0104 a0001c0001t0003g0004 a0001c0001t0003g0103 a0001c0001t0003g0109 a0001c0001t0003g0111 a0001c0001t0003g0125 a0001c0001t0010g0001 a0001c0001t0010g0006 a0001c0001t0010g0130 a0001c0001t0010g0225 a0001c0001t0016g0001 a0001c0001t0016g0006 a0001c0001t0016g0223 a0001c0001t0017g0009 a0001c0001t0017g0035 a0001c0001t0027g0006 a0001c0001t0027g0009 a0001c0001t0028g0006 a0001c0001t0028g0093 a0001c0001t0057g0073 a0001c0001t0059g0085 a0001c0001t0067g0009 a0001c0001t0076g0006 a0001c0001t0106g0138 a0001c0001t0109g0167 a0001c0001t0126g0009 a0001c0001t0127g0035 a0001c0001t0162g0001 a0001c0001t0222g0011 a0001c0001t0236g0011 a0001c0001t0249g0137 a0001c0001t0252g0007 a0001c0001t0255g0004 a0001c0001t0260g0064 a0001c0001t0261g0099 a0001c0001t0264g0004 a0001c0001t0267g0004 a0001c0001t0273g0004 a0001c0001t0278g0209 a0001c0001t0282g0004 a0001c0001t0283g0115 a0001c0001t0285g0004 a0001c0001t0287g0004 a0001c0001t0288g0221 a0001c0001t0289g0016 a0001c0001t0291g0086 a0001c0001t0293g0004 a0001c0001t0294g0098 a0001c0001t0295g0004 a0003c0002t0001g0026	67	436	0.1537	21	c.11 others(34): Show c.11336_*11337insAAAAAAAAAAAAAAAAAAAAA	SLC35E3	ENSG00000175782.11	transcript	ENST00000398004.4	protein_coding	5/5	11337	INFO_REALIGN_3_PRIME	chr12	TogoVar
SLC35F1_chr6_117902264_118322671	118322185	T T	TGTGTGTG others(14): Show TGTGTGTGTGTGTGTGTGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01346.hp1 HG01346.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0071 a0001c0001t0007g0071	1	182	0.0055	21	c.79 others(32): Show c.7933_*7934insGTGTGTGTGTGTGTGTGTGTG	SLC35F1	ENSG00000196376.11	transcript	ENST00000360388.9	protein_coding		4515		chr6	TogoVar
SLC35F3_chr1_233899676_234329511	234058328	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0147 a0001c0002t0005g0147	1	158	0.0063	21	c.283 others(42): Show c.283+152580_283+152600dupTTTTTTTTTTTTTTTTTTTTT	SLC35F3	ENSG00000183780.13	transcript	ENST00000366618.8	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr1	TogoVar
SLC35F3_chr1_233899676_234329511	234326099	A A	AGGAGGAT others(14): Show AGGAGGATGGAGGATGGAGGAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0127 a0001c0002t0002g0127	1	158	0.0063	21	c.28 others(32): Show c.2856_*2857insGGAGGATGGAGGATGGAGGAT	SLC35F3	ENSG00000183780.13	transcript	ENST00000366618.8	protein_coding		1589		chr1	TogoVar
SLC35F4_chr14_57558920_57871092	57586717	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03942.hp1 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0205 a0001c0001t0001g0205	1	218	0.0046	21	c.587 others(38): Show c.587+2478_587+2498dupTTTTTTTTTTTTTTTTTTTTT	SLC35F4	ENSG00000151812.15	transcript	ENST00000556826.6	protein_coding	3/7			chr14	TogoVar
SLC35F6_chr2_26759284_26786231	26784448	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02083.hp2 NA19070.hp2 NA19086.hp2 HG02083.hp2 NA19070.hp2 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	3	302	0.0099	21	c.59 others(32): Show c.5937_*5938insTTTTTTTTTTTTTTTTTTTTT	SLC35F6	ENSG00000213699.9	transcript	ENST00000344420.10	protein_coding		3218		chr2	TogoVar
SLC36A1_chr5_151442603_151497379	151468266	A A	AAAAATAT others(14): Show AAAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0107 a0001c0001t0017g0107	1	404	0.0025	21	c.723 others(36): Show c.723+342_723+343insAAATATATATATATATATATA	SLC36A1	ENSG00000123643.14	transcript	ENST00000243389.8	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr5	TogoVar
SLC36A1_chr5_151442603_151497379	151474159	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG03130.hp1 HG02145.hp2 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0051 a0001c0001t0019g0053 a0001c0001t0019g0051 a0001c0001t0019g0053	2	404	0.0050	21	c.822 others(36): Show c.822+408_822+409insAAAAAAAAAAAAAAAAAAAAA	SLC36A1	ENSG00000123643.14	transcript	ENST00000243389.8	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr5	TogoVar
SLC37A1_chr21_42508852_42586426	42530654	A A	ACACACAC others(14): Show ACACACACACACCCCCCCCCCC	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0174 a0001c0001t0001g0174	1	356	0.0028	21	c.139 others(38): Show c.139-4043_139-4042insACACACACACCCCCCCCCCCC	SLC37A1	ENSG00000160190.14	transcript	ENST00000352133.3	protein_coding	3/19		INFO_REALIGN_3_PRIME	chr21	TogoVar
SLC37A3_chr7_140328752_140403530	140386449	C C	CAATAATA others(14): Show CAATAATAATAATAATAATAAT	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG01358.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0089 a0001c0003t0002g0089	1	346	0.0029	21	c.-70 others(38): Show c.-70-3874_-70-3854dupATTATTATTATTATTATTATT	SLC37A3	ENSG00000157800.18	transcript	ENST00000326232.14	protein_coding	1/14			chr7	TogoVar
SLC38A10_chr17_81239811_81300307	81245402	T T	TTATACTG others(14): Show TTATACTGTCACTCACACTTGG	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0009 a0002c0001t0009	a0002c0001t0009g0125 a0002c0001t0009g0125	1	214	0.0047	21	c.13 others(30): Show c.133_*153dupCCAAGTGTGAGTGACAGTATA	SLC38A10	ENSG00000157637.13	transcript	ENST00000374759.8	protein_coding	16/16	153		chr17	TogoVar
SLC38A9_chr5_55620848_55717324	55677926	T T	TGTGTGTG others(14): Show TGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp1 NA19000.hp2 HG00140.hp2 HG00280.hp1 NA19000.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0210 a0002c0002t0001g0268 a0002c0002t0001g0296 a0002c0002t0001g0210 a0002c0002t0001g0268 a0002c0002t0001g0296	3	350	0.0086	21	c.114 others(38): Show c.114-5232_114-5231insCACACACACACACACACACAC	SLC38A9	ENSG00000177058.12	transcript	ENST00000396865.7	protein_coding	3/15			chr5	TogoVar
SLC39A11_chr17_72640949_73097688	72759111	C C	CAATAATA others(14): Show CAATAATAATAATAATAATAAT	intron_variant intron_variant	MODIFIER	HG03942.hp1 NA18747.hp2 NA18999.hp1 HG03942.hp1 NA18747.hp2 NA18999.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0016 a0001c0001t0001 a0001c0001t0016	a0001c0001t0001g0156 a0001c0001t0001g0179 a0001c0001t0016g0086 a0001c0001t0001g0156 a0001c0001t0001g0179 a0001c0001t0016g0086	3	180	0.0167	21	c.602 others(40): Show c.602-22393_602-22392insATTATTATTATTATTATTATT	SLC39A11	ENSG00000133195.12	transcript	ENST00000255559.8	protein_coding	6/9			chr17	TogoVar
SLC39A11_chr17_72640949_73097688	72759129	T T	TAATAATA others(14): Show TAATAATAATAATAATAATAAA	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0076 a0001c0001t0011g0076	1	180	0.0056	21	c.602 others(40): Show c.602-22411_602-22410insTTTATTATTATTATTATTATT	SLC39A11	ENSG00000133195.12	transcript	ENST00000255559.8	protein_coding	6/9			chr17	TogoVar
SLC39A11_chr17_72640949_73097688	72932292	T T	TTTATTAT others(14): Show TTTATTATTATTATTATTATTA	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02145.hp2 HG02451.hp1 others(4): Show HG01109.hp1 HG02145.hp2 HG02451.hp1 HG02922.hp1 HG02922.hp2 HG03139.hp1 HG03486.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0019 a0002c0002 others(3): Show a0001c0001 a0001c0019 a0002c0002 a0002c0004 a0002c0014 a0005c0013	a0001c0001t0001 a0001c0001t0017 a0001c0019t0003 others(4): Show a0001c0001t0001 a0001c0001t0017 a0001c0019t0003 a0002c0002t0005 a0002c0004t0001 a0002c0014t0001 a0005c0013t0001	a0001c0001t0001g0085 a0001c0001t0017g0079 a0001c0019t0003g0002 others(4): Show a0001c0001t0001g0085 a0001c0001t0017g0079 a0001c0019t0003g0002 a0002c0002t0005g0127 a0002c0004t0001g0060 a0002c0014t0001g0003 a0005c0013t0001g0130	7	180	0.0389	21	c.430 others(40): Show c.430+15459_430+15460insTAATAATAATAATAATAATAA	SLC39A11	ENSG00000133195.12	transcript	ENST00000255559.8	protein_coding	5/9			chr17	TogoVar
SLC39A11_chr17_72640949_73097688	72949144	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18982.hp1 NA20129.hp1 NA18982.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0006 a0001c0001t0002 a0001c0001t0006	a0001c0001t0002g0103 a0001c0001t0006g0087 a0001c0001t0002g0103 a0001c0001t0006g0087	2	180	0.0111	21	c.307 others(38): Show c.307-1290_307-1270dupAAAAAAAAAAAAAAAAAAAAA	SLC39A11	ENSG00000133195.12	transcript	ENST00000255559.8	protein_coding	4/9			chr17	TogoVar
SLC39A11_chr17_72640949_73097688	73047990	A A	AAAAAAAA others(14): Show AAAAAAAAAAAAAAAAATATAT	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00621.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0056 a0001c0001t0003g0056	1	180	0.0056	21	c.148 others(40): Show c.148-16277_148-16276insATATATTTTTTTTTTTTTTTT	SLC39A11	ENSG00000133195.12	transcript	ENST00000255559.8	protein_coding	3/9			chr17	TogoVar
SLC39A11_chr17_72640949_73097688	73047990	A A	AAAAAAAA others(14): Show AAAAAAAAAAAAAAATATATAT	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG01346.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0058 a0001c0001t0004g0058	1	180	0.0056	21	c.148 others(40): Show c.148-16277_148-16276insATATATATTTTTTTTTTTTTT	SLC39A11	ENSG00000133195.12	transcript	ENST00000255559.8	protein_coding	3/9			chr17	TogoVar
SLC39A11_chr17_72640949_73097688	73062461	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02895.hp2 HG02896.hp2 others(1): Show HG02622.hp2 HG02895.hp2 HG02896.hp2 NA19030.hp2	a0002 a0008 a0002 a0008	a0002c0002 a0002c0004 a0008c0024 a0002c0002 a0002c0004 a0008c0024	a0002c0002t0011 a0002c0004t0001 a0008c0024t0007 a0002c0002t0011 a0002c0004t0001 a0008c0024t0007	a0002c0002t0011g0027 a0002c0004t0001g0091 a0002c0004t0001g0092 others(1): Show a0002c0002t0011g0027 a0002c0004t0001g0091 a0002c0004t0001g0092 a0008c0024t0007g0093	4	180	0.0222	21	c.147 others(40): Show c.147+22346_147+22347insTTTTTTTTTTTTTTTTTTTTT	SLC39A11	ENSG00000133195.12	transcript	ENST00000255559.8	protein_coding	3/9			chr17	TogoVar
SLC39A11_chr17_72640949_73097688	73062475	A A	AAAAAAAA others(14): Show AAAAAAAAAAAAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02735.hp1 NA18747.hp1 others(2): Show HG02109.hp1 HG02735.hp1 NA18747.hp1 NA20129.hp2 homoSapiens_chm13v2.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0004 a0001c0001t0008 a0001c0001t0012 others(2): Show a0001c0001t0004 a0001c0001t0008 a0001c0001t0012 a0003c0003t0001 a0003c0003t0006	a0001c0001t0004g0062 a0001c0001t0008g0163 a0001c0001t0012g0138 others(2): Show a0001c0001t0004g0062 a0001c0001t0008g0163 a0001c0001t0012g0138 a0003c0003t0001g0055 a0003c0003t0006g0006	5	180	0.0278	21	c.147 others(40): Show c.147+22332_147+22333insGTTTTTTTTTTTTTTTTTTTT	SLC39A11	ENSG00000133195.12	transcript	ENST00000255559.8	protein_coding	3/9			chr17	TogoVar
SLC39A11_chr17_72640949_73097688	73062475	A A	AAAAAAAA others(14): Show AAAAAAAAAAAAAAAACAAAAC	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0004 a0001c0001t0002g0004	1	180	0.0056	21	c.147 others(40): Show c.147+22332_147+22333insGTTTTGTTTTTTTTTTTTTTT	SLC39A11	ENSG00000133195.12	transcript	ENST00000255559.8	protein_coding	3/9			chr17	TogoVar
SLC39A12_chr10_17946918_18048285	18036790	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00423.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0068 a0001c0001t0003g0068	1	368	0.0027	21	c.194 others(40): Show c.1948-5914_1948-5913insTTTTTTTTTTTTTTTTTTTTT	SLC39A12	ENSG00000148482.12	transcript	ENST00000377369.7	protein_coding	12/12		INFO_REALIGN_3_PRIME	chr10	TogoVar
SLC39A12_chr10_17946918_18048285	18036792	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG02027.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0054 a0001c0001t0003g0054	1	368	0.0027	21	c.194 others(40): Show c.1948-5912_1948-5911insTTTTTTTTTTTTTTTTTTTTT	SLC39A12	ENSG00000148482.12	transcript	ENST00000377369.7	protein_coding	12/12		INFO_REALIGN_3_PRIME	chr10	TogoVar
SLC39A12_chr10_17946918_18048285	18036794	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02886.hp2 NA18955.hp1 NA19064.hp2 HG02886.hp2 NA18955.hp1 NA19064.hp2	a0002 a0012 a0002 a0012	a0002c0003 a0002c0004 a0012c0028 a0002c0003 a0002c0004 a0012c0028	a0002c0003t0003 a0002c0004t0003 a0012c0028t0003 a0002c0003t0003 a0002c0004t0003 a0012c0028t0003	a0002c0003t0003g0129 a0002c0004t0003g0116 a0012c0028t0003g0332 a0002c0003t0003g0129 a0002c0004t0003g0116 a0012c0028t0003g0332	3	368	0.0082	21	c.194 others(40): Show c.1948-5900_1948-5899insTTTTTTTTTTTTTTTTTTTTT	SLC39A12	ENSG00000148482.12	transcript	ENST00000377369.7	protein_coding	12/12		INFO_REALIGN_3_PRIME	chr10	TogoVar
SLC39A14_chr8_22362278_22427736	22391233	G G	GTTCCTTG others(14): Show GTTCCTTGTTGAATTGTTTGCT	intron_variant intron_variant	MODIFIER	NA19077.hp2 NA19077.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0002 a0001c0004t0002	a0001c0004t0002g0201 a0001c0004t0002g0201	1	324	0.0031	21	c.-15 others(40): Show c.-15-13458_-15-13438dupTTGTTGAATTGTTTGCTTTCC	SLC39A14	ENSG00000104635.15	transcript	ENST00000359741.10	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr8	TogoVar
SLC39A6_chr18_36103531_36134340	36106261	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00544.hp1 NA19012.hp1 NA19068.hp1 HG00544.hp1 NA19012.hp1 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0008 a0001c0001t0001g0039 a0001c0001t0005g0023 a0001c0001t0001g0008 a0001c0001t0001g0039 a0001c0001t0005g0023	3	410	0.0073	21	c.33 others(32): Show c.3331_*3332insAAAAAAAAAAAAAAAAAAAAA	SLC39A6	ENSG00000141424.13	transcript	ENST00000269187.10	protein_coding		2269		chr18	TogoVar
SLC41A2_chr12_104796801_104963290	104878299	T T	TATATATA others(14): Show TATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0020 a0001c0002t0020	a0001c0002t0020g0035 a0001c0002t0020g0035	1	386	0.0026	21	c.102 others(40): Show c.1027+7993_1027+7994insTATATATATATATATATATAT	SLC41A2	ENSG00000136052.10	transcript	ENST00000258538.8	protein_coding	6/10			chr12	TogoVar
SLC43A2_chr17_1564268_1633834	1600152	A A	ATATATAT others(14): Show ATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0082 a0001c0001t0003g0082	1	382	0.0026	21	c.502 others(38): Show c.502-6874_502-6873insATATATATATATATATATATA	SLC43A2	ENSG00000167703.15	transcript	ENST00000301335.10	protein_coding	5/13			chr17	TogoVar
SLC43A3_chr11_57401954_57432121	57403470	A A	AGAAGAAG others(14): Show AGAAGAAGAAGAAGAAGAAGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02132.hp1 HG02280.hp1 HG02976.hp1 others(1): Show HG02132.hp1 HG02280.hp1 HG02976.hp1 NA19043.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0002c0002t0001	a0001c0001t0002g0168 a0001c0001t0003g0002 a0001c0001t0008g0175 others(1): Show a0001c0001t0002g0168 a0001c0001t0003g0002 a0001c0001t0008g0175 a0002c0002t0001g0020	4	330	0.0121	21	c.43 others(32): Show c.4321_*4322insCTCTTCTTCTTCTTCTTCTTC	SLC43A3	ENSG00000134802.18	transcript	ENST00000395124.6	protein_coding		3483		chr11	TogoVar
SLC43A3_chr11_57401954_57432121	57403565	A A	AGAAGAAG others(14): Show AGAAGAAGAGGAAGAGGAAGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03927.hp2 HG03927.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0103 a0001c0001t0001g0103	1	330	0.0030	21	c.42 others(32): Show c.4226_*4227insCTCTTCCTCTTCCTCTTCTTC	SLC43A3	ENSG00000134802.18	transcript	ENST00000395124.6	protein_coding		3388		chr11	TogoVar
SLC44A1_chr9_105239651_105402346	105354039	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0076 a0002c0002t0076	a0002c0002t0076g0118 a0002c0002t0076g0118	1	142	0.0070	21	c.501 others(38): Show c.501-2164_501-2144dupTTTTTTTTTTTTTTTTTTTTT	SLC44A1	ENSG00000070214.17	transcript	ENST00000374720.8	protein_coding	5/15		INFO_REALIGN_3_PRIME	chr9	TogoVar
SLC44A2_chr19_10620553_10649557	10629261	C C	CTATTATT others(14): Show CTATTATTATTATTATTATTAT	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02922.hp1 HG03927.hp2 others(1): Show HG02145.hp2 HG02922.hp1 HG03927.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0010 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0010 a0001c0006t0009	a0001c0001t0001g0230 a0001c0001t0002g0167 a0001c0001t0010g0154 others(1): Show a0001c0001t0001g0230 a0001c0001t0002g0167 a0001c0001t0010g0154 a0001c0006t0009g0153	4	402	0.0100	21	c.245 others(38): Show c.245+1277_245+1278insTTATTATTATTATTATTATTA	SLC44A2	ENSG00000129353.15	transcript	ENST00000335757.10	protein_coding	4/21		INFO_REALIGN_3_PRIME	chr19	TogoVar
SLC44A2_chr19_10620553_10649557	10637608	T T	TCCCCCCC others(14): Show TCCCCCCCCCCCCCCCCCCCCC	intron_variant intron_variant	MODIFIER	NA19072.hp1 NA19072.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0065 a0001c0001t0005g0065	1	402	0.0025	21	c.159 others(36): Show c.1592-32_1592-31insCCCCCCCCCCCCCCCCCCCCC	SLC44A2	ENSG00000129353.15	transcript	ENST00000335757.10	protein_coding	16/21		INFO_REALIGN_3_PRIME	chr19	TogoVar
SLC44A5_chr1_75197129_75616114	75445522	T T	TGTATATA others(14): Show TGTATATATTACGTAATATATA	intron_variant intron_variant	MODIFIER	HG03710.hp2 HG03710.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0122 a0001c0003t0001g0122	1	156	0.0064	21	c.14- others(38): Show c.14-48922_14-48902dupTATATATTACGTAATATATAC	SLC44A5	ENSG00000137968.17	transcript	ENST00000370859.8	protein_coding	2/23			chr1	TogoVar
SLC44A5_chr1_75197129_75616114	75537033	A A	AAAAAAAA others(14): Show AAAAAAAAAAAAATATATATAT	intron_variant intron_variant	MODIFIER	HG02738.hp2 HG02738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0047 a0001c0001t0001g0047	1	156	0.0064	21	c.13+ others(36): Show c.13+4401_13+4402insATATATATATTTTTTTTTTTT	SLC44A5	ENSG00000137968.17	transcript	ENST00000370859.8	protein_coding	2/23			chr1	TogoVar
SLC45A2_chr5_33939623_33989693	33969063	C C	CCTCTCTC others(14): Show CCTCTCTCTCTCTCTCTCTCTG	intron_variant intron_variant	MODIFIER	NA19087.hp1 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0355 a0001c0001t0001g0355	1	440	0.0023	21	c.563 others(38): Show c.563-5048_563-5047insCAGAGAGAGAGAGAGAGAGAG	SLC45A2	ENSG00000164175.15	transcript	ENST00000296589.9	protein_coding	2/6			chr5	TogoVar
SLC45A2_chr5_33939623_33989693	33969066	T T	TCTCTCTC others(14): Show TCTCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG02602.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0194 a0001c0003t0001g0194	1	440	0.0023	21	c.563 others(38): Show c.563-5051_563-5050insGAGAGAGAGAGAGAGAGAGAG	SLC45A2	ENSG00000164175.15	transcript	ENST00000296589.9	protein_coding	2/6			chr5	TogoVar
SLC45A4_chr8_141202174_141313288	141203178	G G	GGAGAGGG others(14): Show GGAGAGGGAGACCGTGGAGAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02155.hp1 homoSapiens_chm13v2.hp1 HG02155.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0006 a0001c0004t0006	a0001c0004t0006g0079 a0001c0004t0006g0091 a0001c0004t0006g0079 a0001c0004t0006g0091	2	188	0.0106	21	c.83 others(32): Show c.8393_*8394insTCTCTCCACGGTCTCCCTCTC	SLC45A4	ENSG00000022567.10	transcript	ENST00000517878.6	protein_coding		3995		chr8	TogoVar
SLC45A4_chr8_141202174_141313288	141204597	G G	GACAAGAA others(14): Show GACAAGAATTTTTATCCAAAAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0014 a0001c0014	a0001c0014t0028 a0001c0014t0028	a0001c0014t0028g0030 a0001c0014t0028g0030	1	188	0.0053	21	c.69 others(32): Show c.6974_*6975insATTTTGGATAAAAATTCTTGT	SLC45A4	ENSG00000022567.10	transcript	ENST00000517878.6	protein_coding		2576		chr8	TogoVar
SLC45A4_chr8_141202174_141313288	141301734	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0097 a0002c0001t0001g0097	1	188	0.0053	21	c.-40 others(40): Show c.-401+6341_-401+6361dupTTTTTTTTTTTTTTTTTTTTT	SLC45A4	ENSG00000022567.10	transcript	ENST00000517878.6	protein_coding	1/8			chr8	TogoVar

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