Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
SNTB1_chr8_120530756_120817046	120654039	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00673.hp1 HG03492.hp1 others(1): Show HG00609.hp2 HG00673.hp1 HG03492.hp1 NA19082.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0008 a0001c0002t0004 a0001c0001t0002 a0001c0001t0008 a0001c0002t0004	a0001c0001t0002g0047 a0001c0001t0002g0129 a0001c0001t0008g0074 others(1): Show a0001c0001t0002g0047 a0001c0001t0002g0129 a0001c0001t0008g0074 a0001c0002t0004g0243	4	254	0.0158	21	c.789 others(40): Show c.789-21409_789-21389dupTTTTTTTTTTTTTTTTTTTTT		SNTB1	ENSG00000172164.15	transcript	ENST00000517992.2	protein_coding	2/6						chr8	TogoVar
SNTB2_chr16_69182164_69314052	69199595	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02886.hp2 HG03041.hp1 others(2): Show HG02451.hp2 HG02886.hp2 HG03041.hp1 HG03540.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0002t0008 a0001c0001t0006 a0001c0002t0008	a0001c0001t0006g0049 a0001c0001t0006g0057 a0001c0001t0006g0058 others(2): Show a0001c0001t0006g0049 a0001c0001t0006g0057 a0001c0001t0006g0058 a0001c0002t0008g0015 a0001c0002t0008g0016	5	218	0.0229	21	c.580 others(40): Show c.580+11865_580+11866insAAAAAAAAAAAAAAAAAAAAA		SNTB2	ENSG00000168807.17	transcript	ENST00000336278.9	protein_coding	1/6					INFO_REALIGN_3_PRIME	chr16	TogoVar
SNTG1_chr8_49906407_50801692	50115567	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0026 a0001c0001t0002g0026	1	106	0.0094	21	c.-10 others(42): Show c.-102-56974_-102-56973insAAAAAAAAAAAAAAAAAAAAA		SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	1/18					INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50115576	A A	AAAAAAAA others(14): Show AAAAAAAAAAAAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01192.hp1 HG02145.hp1 others(14): Show HG00280.hp2 HG01192.hp1 HG02145.hp1 HG02965.hp1 HG03017.hp2 HG03490.hp2 HG03491.hp2 HG03540.hp1 HG03669.hp2 HG06807.hp1 NA18952.hp2 NA18968.hp1 NA18992.hp1 NA19060.hp1 NA19085.hp2 NA20129.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0004 a0001c0001t0008 others(7): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012 a0001c0001t0026 a0001c0001t0028 a0001c0001t0031 a0001c0002t0001 a0001c0002t0025	a0001c0001t0001g0086 a0001c0001t0004g0094 a0001c0001t0008g0061 others(14): Show a0001c0001t0001g0086 a0001c0001t0004g0094 a0001c0001t0008g0061 a0001c0001t0009g0085 a0001c0001t0012g0049 a0001c0001t0026g0095 a0001c0001t0028g0093 a0001c0001t0031g0055 a0001c0002t0001g0059 a0001c0002t0001g0060 a0001c0002t0001g0080 a0001c0002t0001g0082 a0001c0002t0001g0083 a0001c0002t0001g0092 a0001c0002t0001g0096 a0001c0002t0001g0098 a0001c0002t0025g0089	17	106	0.1604	21	c.-10 others(42): Show c.-102-56974_-102-56973insAAAAAAAAACAAAAAAAAAAA		SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	1/18					INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50115576	A A	AAAAAAAA others(14): Show AAAAAAAAAACAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0029 a0001c0002t0029	a0001c0002t0029g0088 a0001c0002t0029g0088	1	106	0.0094	21	c.-10 others(42): Show c.-102-56976_-102-56975insCAAAAAAAAAACAAAAAAAAA		SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	1/18					INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50422270	A A	ATCTATCT others(14): Show ATCTATCTATCTATCTATCTAT	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp1 HG03491.hp2 HG02896.hp2 HG02897.hp1 HG03491.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0009 a0001c0002t0001 a0001c0001t0009 a0001c0002t0001	a0001c0001t0009g0100 a0001c0001t0009g0101 a0001c0002t0001g0082 a0001c0001t0009g0100 a0001c0001t0009g0101 a0001c0002t0001g0082	3	106	0.0283	21	c.163 others(40): Show c.163-16273_163-16272insTCTATCTATCTATCTATCTAT		SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	4/18						chr8	TogoVar
SNTG1_chr8_49906407_50801692	50701579	T T	TTTCTTCT others(14): Show TTTCTTCTTCTTCTTCTTCTTC	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02809.hp1 HG02965.hp2 others(4): Show HG02109.hp2 HG02809.hp1 HG02965.hp2 HG03490.hp1 NA18968.hp2 NA19060.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 others(1): Show a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0015	a0001c0001t0004g0102 a0001c0001t0005g0022 a0001c0001t0005g0024 others(4): Show a0001c0001t0004g0102 a0001c0001t0005g0022 a0001c0001t0005g0024 a0001c0001t0007g0036 a0001c0001t0007g0037 a0001c0001t0007g0039 a0001c0001t0015g0001	7	106	0.0660	21	c.103 others(40): Show c.1039-3015_1039-3014insTTCTTCTTCTTCTTCTTCTTC		SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	15/18					INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG2_chr2_945849_1372613	1031528	A A	ATATATAT others(14): Show ATATATATATATATATATATTT	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG02258.hp1 HG02976.hp1 HG00642.hp2 HG02258.hp1 HG02976.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0001 a0004c0004t0001 a0001c0001t0001 a0004c0004t0001	a0001c0001t0001g0078 a0004c0004t0001g0047 a0004c0004t0001g0088 a0001c0001t0001g0078 a0004c0004t0001g0047 a0004c0004t0001g0088	3	190	0.0158	21	c.73- others(38): Show c.73-51989_73-51988insATATATATATATATATATTTT		SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	1/16					INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1051157	T T	TCCCCCTT others(14): Show TCCCCCTTTCTTCCTCCCTCCC	intron_variant intron_variant	MODIFIER	HG02071.hp2 HG02602.hp2 HG04115.hp1 HG02071.hp2 HG02602.hp2 HG04115.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0005 a0001c0002 a0002c0005	a0001c0002t0001 a0002c0005t0001 a0001c0002t0001 a0002c0005t0001	a0001c0002t0001g0029 a0001c0002t0001g0172 a0002c0005t0001g0032 a0001c0002t0001g0029 a0001c0002t0001g0172 a0002c0005t0001g0032	3	190	0.0158	21	c.73- others(38): Show c.73-32360_73-32340dupCCCCCTTTCTTCCTCCCTCCC		SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	1/16					INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1278920	A A	ACGCGAAT others(14): Show ACGCGAATCACCCCTGTCAGTG	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01099.hp1 HG01192.hp1 others(16): Show HG00735.hp1 HG01099.hp1 HG01192.hp1 HG01257.hp2 HG01346.hp2 HG01516.hp2 HG01517.hp2 HG02683.hp1 HG02738.hp1 HG02922.hp1 HG03471.hp2 HG03942.hp2 NA18522.hp2 NA18942.hp2 NA18968.hp2 NA18986.hp1 NA18990.hp2 NA19000.hp2 homoSapiens_chm13v2.hp1	a0001 a0003 a0005 others(6): Show a0001 a0003 a0005 a0006 a0008 a0010 a0016 a0017 a0023	a0001c0001 a0003c0007 a0003c0008 others(7): Show a0001c0001 a0003c0007 a0003c0008 a0005c0006 a0006c0010 a0008c0011 a0010c0012 a0016c0034 a0017c0031 a0023c0027	a0001c0001t0001 a0003c0007t0001 a0003c0008t0001 others(7): Show a0001c0001t0001 a0003c0007t0001 a0003c0008t0001 a0005c0006t0001 a0006c0010t0001 a0008c0011t0001 a0010c0012t0001 a0016c0034t0001 a0017c0031t0001 a0023c0027t0001	a0001c0001t0001g0035 a0003c0007t0001g0018 a0003c0007t0001g0068 others(16): Show a0001c0001t0001g0035 a0003c0007t0001g0018 a0003c0007t0001g0068 a0003c0008t0001g0013 a0003c0008t0001g0060 a0003c0008t0001g0095 a0003c0008t0001g0106 a0005c0006t0001g0176 a0005c0006t0001g0189 a0006c0010t0001g0006 a0008c0011t0001g0004 a0008c0011t0001g0128 a0008c0011t0001g0182 a0008c0011t0001g0188 a0010c0012t0001g0096 a0010c0012t0001g0166 a0016c0034t0001g0146 a0017c0031t0001g0110 a0023c0027t0001g0127	19	190	0.1000	21	c.128 others(42): Show c.1284+11372_1284+11392dupGCGAATCACCCCTGTCAGTGC		SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	14/16					INFO_REALIGN_3_PRIME	chr2	TogoVar
SNX10_chr7_26286862_26379383	26358806	T T	TTTTTTTT others(14): Show TTTTTTTTTGTTTTTGTTTTTG	intron_variant intron_variant	MODIFIER	NA18612.hp1 NA18612.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0221 a0001c0001t0008g0221	1	390	0.0026	21	c.25- others(36): Show c.25-2161_25-2160insGTTTTTGTTTTTGTTTTTTTT		SNX10	ENSG00000086300.17	transcript	ENST00000338523.9	protein_coding	2/6					INFO_REALIGN_3_PRIME	chr7	TogoVar
SNX10_chr7_26286862_26379383	26358806	T T	TTTTTTTT others(14): Show TTTTTTTTTTTGTTTGTTTTTG	intron_variant intron_variant	MODIFIER	NA18971.hp1 NA19067.hp1 NA18971.hp1 NA19067.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0008 a0001c0001t0002 a0001c0001t0008	a0001c0001t0002g0346 a0001c0001t0008g0205 a0001c0001t0002g0346 a0001c0001t0008g0205	2	390	0.0051	21	c.25- others(36): Show c.25-2159_25-2158insGTTTGTTTTTGTTTTTTTTTT		SNX10	ENSG00000086300.17	transcript	ENST00000338523.9	protein_coding	2/6					INFO_REALIGN_3_PRIME	chr7	TogoVar
SNX10_chr7_26286862_26379383	26358806	T T	TTTTTTTT others(14): Show TTTTTTTTTTTTTTTGTTTTTG	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00621.hp2 HG00741.hp2 others(21): Show HG00544.hp2 HG00621.hp2 HG00741.hp2 HG01106.hp1 HG01192.hp2 HG01257.hp1 HG01258.hp1 HG01975.hp2 HG02083.hp2 HG02155.hp1 NA18612.hp2 NA18944.hp1 NA18945.hp1 NA18951.hp1 NA18981.hp2 NA18983.hp1 NA18985.hp2 NA18999.hp1 NA19004.hp1 NA19065.hp2 NA19080.hp2 NA19083.hp1 NA20752.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0015 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0015 a0001c0001t0028	a0001c0001t0001g0235 a0001c0001t0002g0002 a0001c0001t0002g0004 others(19): Show a0001c0001t0001g0235 a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0096 a0001c0001t0002g0097 a0001c0001t0002g0098 a0001c0001t0002g0099 a0001c0001t0002g0101 a0001c0001t0002g0236 a0001c0001t0002g0244 a0001c0001t0002g0245 a0001c0001t0002g0248 a0001c0001t0002g0249 a0001c0001t0002g0250 a0001c0001t0002g0251 a0001c0001t0002g0296 a0001c0001t0002g0311 a0001c0001t0002g0340 a0001c0001t0002g0351 a0001c0001t0002g0358 a0001c0001t0015g0060 a0001c0001t0028g0059	24	390	0.0615	21	c.25- others(36): Show c.25-2155_25-2154insGTTTTTGTTTTTTTTTTTTTT		SNX10	ENSG00000086300.17	transcript	ENST00000338523.9	protein_coding	2/6					INFO_REALIGN_3_PRIME	chr7	TogoVar
SNX13_chr7_17785761_17945494	17805254	T T	TGCGCGCG others(14): Show TGCGCGCGCGCAGCGCGCGCGC	intron_variant intron_variant	MODIFIER	NA19012.hp1 NA19012.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0121 a0001c0001t0001g0121	1	338	0.0030	21	c.206 others(40): Show c.2065-1675_2065-1674insGCGCGCGCGCTGCGCGCGCGC		SNX13	ENSG00000071189.21	transcript	ENST00000428135.7	protein_coding	20/25						chr7	TogoVar
SNX15_chr11_65022439_65045572	65025779	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp1 HG01934.hp1 HG02257.hp2 others(3): Show HG01109.hp1 HG01934.hp1 HG02257.hp2 HG02717.hp2 HG03098.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0009 a0001c0001t0001g0132 a0001c0001t0001g0009 a0001c0001t0001g0132	6	338	0.0178	21	c.-17 others(32): Show c.-1759_-1758insTTTTTTTTTTTTTTTTTTTTT		SNX15	ENSG00000110025.13	transcript	ENST00000377244.8	protein_coding					1659		chr11	TogoVar
SNX15_chr11_65022439_65045572	65039029	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG03195.hp2 HG03225.hp2 others(2): Show HG02055.hp1 HG03195.hp2 HG03225.hp2 NA19030.hp1 NA19030.hp2	a0001 a0007 a0001 a0007	a0001c0001 a0001c0002 a0007c0009 a0001c0001 a0001c0002 a0007c0009	a0001c0001t0004 a0001c0002t0002 a0007c0009t0004 a0001c0001t0004 a0001c0002t0002 a0007c0009t0004	a0001c0001t0004g0144 a0001c0001t0004g0148 a0001c0002t0002g0111 others(2): Show a0001c0001t0004g0144 a0001c0001t0004g0148 a0001c0002t0002g0111 a0001c0002t0002g0114 a0007c0009t0004g0120	5	338	0.0148	21	c.922 others(36): Show c.922+219_922+220insTTTTTTTTTTTTTTTTTTTTT		SNX15	ENSG00000110025.13	transcript	ENST00000377244.8	protein_coding	7/7					INFO_REALIGN_3_PRIME	chr11	TogoVar
SNX18_chr5_54512759_54551586	54513823	A A	ATATATAT others(14): Show ATATATATGATATATATAAATT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00423.hp1 HG00558.hp2 HG00609.hp1 others(105): Show HG00423.hp1 HG00558.hp2 HG00609.hp1 HG00642.hp2 HG00741.hp2 HG01099.hp2 HG01123.hp1 HG01167.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp2 HG01891.hp1 HG01978.hp2 HG02040.hp2 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02129.hp1 HG02145.hp2 HG02165.hp1 HG02257.hp1 HG02273.hp1 HG02280.hp2 HG02300.hp1 HG02523.hp2 HG02572.hp1 HG02615.hp1 HG02647.hp2 HG02735.hp1 HG02895.hp1 HG02897.hp1 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp2 HG03669.hp1 HG03669.hp2 HG03704.hp2 HG03831.hp1 HG03834.hp2 HG03942.hp2 NA18906.hp1 NA18940.hp1 NA18941.hp2 NA18945.hp1 NA18948.hp1 NA18950.hp1 NA18950.hp2 NA18954.hp1 NA18957.hp1 NA18959.hp2 NA18961.hp1 NA18965.hp1 NA18967.hp2 NA18968.hp2 NA18970.hp2 NA18972.hp1 NA18978.hp1 NA18978.hp2 NA18980.hp2 NA18981.hp2 NA18982.hp2 NA18983.hp2 NA18984.hp1 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18993.hp1 NA18994.hp2 NA18998.hp1 NA18999.hp2 NA19002.hp1 NA19010.hp1 NA19011.hp1 NA19043.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19068.hp2 NA19076.hp1 NA19076.hp2 NA19078.hp1 NA19078.hp2 NA19080.hp1 NA19081.hp1 NA19081.hp2 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp2 NA20129.hp2 NA20752.hp1 NA21309.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0001c0004 a0001c0005 others(4): Show a0001c0001 a0001c0004 a0001c0005 a0001c0009 a0001c0014 a0001c0016 a0005c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(16): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0012 a0001c0001t0015 a0001c0001t0021 a0001c0001t0027 a0001c0001t0034 a0001c0001t0036 a0001c0004t0001 a0001c0004t0040 a0001c0005t0004 a0001c0005t0006 a0001c0005t0020 a0001c0009t0049 a0001c0014t0002 a0001c0016t0002 a0005c0010t0003	a0001c0001t0001g0035 a0001c0001t0001g0068 a0001c0001t0001g0078 others(65): Show a0001c0001t0001g0035 a0001c0001t0001g0068 a0001c0001t0001g0078 a0001c0001t0001g0092 a0001c0001t0002g0001 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0012 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0034 a0001c0001t0002g0037 a0001c0001t0002g0040 a0001c0001t0002g0052 a0001c0001t0002g0058 a0001c0001t0002g0062 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0071 a0001c0001t0002g0077 a0001c0001t0002g0080 a0001c0001t0002g0094 a0001c0001t0002g0096 a0001c0001t0002g0099 a0001c0001t0002g0104 a0001c0001t0002g0105 a0001c0001t0003g0001 a0001c0001t0003g0012 a0001c0001t0003g0016 a0001c0001t0003g0019 a0001c0001t0003g0055 a0001c0001t0003g0059 a0001c0001t0003g0063 a0001c0001t0003g0069 a0001c0001t0003g0074 a0001c0001t0003g0076 a0001c0001t0003g0082 a0001c0001t0003g0091 a0001c0001t0003g0101 a0001c0001t0004g0070 a0001c0001t0012g0001 a0001c0001t0012g0060 a0001c0001t0015g0001 a0001c0001t0015g0061 a0001c0001t0015g0093 a0001c0001t0021g0016 a0001c0001t0021g0088 a0001c0001t0027g0095 a0001c0001t0034g0001 a0001c0001t0036g0018 a0001c0004t0001g0003 a0001c0004t0001g0014 a0001c0004t0001g0026 a0001c0004t0001g0043 a0001c0004t0001g0121 a0001c0004t0001g0133 a0001c0004t0001g0135 a0001c0004t0001g0136 a0001c0004t0040g0003 a0001c0005t0004g0007 a0001c0005t0004g0169 a0001c0005t0006g0184 a0001c0005t0020g0022 a0001c0009t0049g0171 a0001c0014t0002g0017 a0001c0016t0002g0079 a0005c0010t0003g0001	108	390	0.2769	21	c.-41 others(32): Show c.-4130_-4129insTATATATGATATATATAAATT		SNX18	ENSG00000178996.14	transcript	ENST00000381410.5	protein_coding					3935		chr5	TogoVar
SNX1_chr15_64090982_64149231	64140983	T T	TAGATAGA others(14): Show TAGATAGATAGATAGATAGATA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03579.hp2 NA18939.hp2 HG03579.hp2 NA18939.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0048 a0001c0002t0081 a0001c0001t0048 a0001c0002t0081	a0001c0001t0048g0148 a0001c0002t0081g0095 a0001c0001t0048g0148 a0001c0002t0081g0095	2	270	0.0074	21	c.33 others(32): Show c.3365_*3366insAGATAGATAGATAGATAGATA		SNX1	ENSG00000028528.15	transcript	ENST00000559844.6	protein_coding	15/15				3366		chr15	TogoVar
SNX25_chr4_185204598_185368966	185212491	G G	GTGTGTGT others(14): Show GTGTGTGTGTGTGTTTTTGTTT	intron_variant intron_variant	MODIFIER	NA18964.hp2 NA18964.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	276	0.0036	21	c.429 others(38): Show c.429+2237_429+2238insGTGTGTGTGTGTTTTTGTTTT		SNX25	ENSG00000109762.17	transcript	ENST00000652585.2	protein_coding	1/18					INFO_REALIGN_3_PRIME	chr4	TogoVar
SNX27_chr1_151607050_151704080	151681235	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02738.hp2 HG03139.hp2 others(1): Show HG02258.hp1 HG02738.hp2 HG03139.hp2 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0104 a0001c0001t0123 a0001c0001t0127 others(1): Show a0001c0001t0104 a0001c0001t0123 a0001c0001t0127 a0001c0001t0129	a0001c0001t0104g0081 a0001c0001t0123g0339 a0001c0001t0127g0084 others(1): Show a0001c0001t0104g0081 a0001c0001t0123g0339 a0001c0001t0127g0084 a0001c0001t0129g0083	4	366	0.0109	21	c.115 others(40): Show c.1150-2117_1150-2097dupTTTTTTTTTTTTTTTTTTTTT		SNX27	ENSG00000143376.14	transcript	ENST00000458013.7	protein_coding	7/11					INFO_REALIGN_3_PRIME	chr1	TogoVar
SNX29_chr16_11971734_12579287	11979275	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0008 a0008	a0008c0019 a0008c0019	a0008c0019t0019 a0008c0019t0019	a0008c0019t0019g0067 a0008c0019t0019g0067	1	176	0.0057	21	c.7+2 others(34): Show c.7+2466_7+2486dupAAAAAAAAAAAAAAAAAAAAA		SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	1/20					INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12118313	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0016 a0001c0001t0013g0016	1	176	0.0057	21	c.140 others(40): Show c.1403-8317_1403-8297dupTTTTTTTTTTTTTTTTTTTTT		SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	11/20					INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12339370	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0067 a0001c0002t0067	a0001c0002t0067g0059 a0001c0002t0067g0059	1	176	0.0057	21	c.178 others(42): Show c.1783-16789_1783-16769dupAAAAAAAAAAAAAAAAAAAAA		SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	15/20					INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12461974	A A	ATATATAT others(14): Show ATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00323.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0141 a0001c0001t0001g0141	1	176	0.0057	21	c.203 others(42): Show c.2038-15745_2038-15744insTATATATATATATATATATAT		SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	18/20						chr16	TogoVar
SNX29_chr16_11971734_12579287	12483114	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02015.hp2 HG02015.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0005 a0001c0004t0005	a0001c0004t0005g0171 a0001c0004t0005g0171	1	176	0.0057	21	c.217 others(40): Show c.2178+5264_2178+5284dupTTTTTTTTTTTTTTTTTTTTT		SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	19/20					INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX31_chr8_100567889_100654665	100641565	A A	AAAAATAT others(14): Show AAAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG01361.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0001 a0005c0005t0001	a0005c0005t0001g0167 a0005c0005t0001g0167	1	304	0.0033	21	c.142 others(38): Show c.142-5555_142-5554insATATATATATATATATATTTT		SNX31	ENSG00000174226.9	transcript	ENST00000311812.7	protein_coding	2/13						chr8	TogoVar
SNX32_chr11_65828963_65858701	65832656	C C	CCAGCTTC others(14): Show CCAGCTTCTCTCCACTTGATCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(366): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02622.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18979.hp1 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0001c0003 others(6): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0006 a0001c0007 a0002c0005 a0003c0010 a0004c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0002t0002 a0001c0003t0003 a0001c0004t0001 a0001c0006t0001 a0001c0007t0001 a0002c0005t0001 a0003c0010t0003 a0004c0008t0003	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0005 others(255): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0108 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0262 a0001c0001t0001g0266 a0001c0001t0001g0271 a0001c0001t0002g0009 a0001c0001t0002g0011 a0001c0001t0002g0015 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0020 a0001c0001t0002g0031 a0001c0001t0002g0033 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0040 a0001c0001t0002g0043 a0001c0001t0002g0048 a0001c0001t0002g0110 a0001c0001t0002g0111 a0001c0001t0002g0112 a0001c0001t0002g0113 a0001c0001t0002g0114 a0001c0001t0002g0115 a0001c0001t0002g0116 a0001c0001t0002g0117 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0129 a0001c0001t0002g0139 a0001c0001t0002g0140 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0149 a0001c0001t0002g0153 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0168 a0001c0001t0002g0169 a0001c0001t0002g0175 a0001c0001t0002g0176 a0001c0001t0002g0186 a0001c0001t0002g0187 a0001c0001t0002g0188 a0001c0001t0002g0189 a0001c0001t0002g0193 a0001c0001t0002g0219 a0001c0001t0002g0220 a0001c0001t0002g0221 a0001c0001t0002g0222 a0001c0001t0002g0227 a0001c0001t0002g0230 a0001c0001t0002g0236 a0001c0001t0002g0254 a0001c0001t0002g0261 a0001c0001t0002g0267 a0001c0001t0002g0268 a0001c0001t0002g0269 a0001c0001t0002g0270 a0001c0001t0003g0001 a0001c0001t0003g0003 a0001c0001t0003g0008 a0001c0001t0003g0014 a0001c0001t0003g0041 a0001c0001t0003g0042 a0001c0001t0003g0143 a0001c0001t0003g0144 a0001c0001t0003g0145 a0001c0001t0003g0161 a0001c0001t0003g0170 a0001c0001t0003g0171 a0001c0001t0003g0172 a0001c0001t0003g0190 a0001c0001t0003g0191 a0001c0001t0003g0192 a0001c0001t0003g0195 a0001c0001t0003g0196 a0001c0001t0003g0197 a0001c0001t0003g0198 a0001c0001t0003g0199 a0001c0001t0003g0200 a0001c0001t0003g0201 a0001c0001t0003g0202 a0001c0001t0003g0203 a0001c0001t0003g0206 a0001c0001t0003g0207 a0001c0001t0003g0208 a0001c0001t0003g0209 a0001c0001t0003g0210 a0001c0001t0003g0211 a0001c0001t0003g0212 a0001c0001t0003g0213 a0001c0001t0003g0214 a0001c0001t0003g0215 a0001c0001t0003g0216 a0001c0001t0003g0217 a0001c0001t0003g0223 a0001c0001t0003g0224 a0001c0001t0003g0225 a0001c0001t0003g0226 a0001c0001t0003g0228 a0001c0001t0003g0229 a0001c0001t0003g0232 a0001c0001t0003g0233 a0001c0001t0003g0237 a0001c0001t0003g0251 a0001c0001t0003g0252 a0001c0001t0003g0253 a0001c0001t0003g0263 a0001c0001t0003g0265 a0001c0001t0004g0010 a0001c0001t0004g0038 a0001c0001t0004g0155 a0001c0001t0004g0156 a0001c0001t0005g0234 a0001c0001t0005g0235 a0001c0001t0006g0257 a0001c0002t0002g0007 a0001c0002t0002g0137 a0001c0002t0002g0150 a0001c0002t0002g0151 a0001c0002t0002g0152 a0001c0002t0002g0154 a0001c0002t0002g0162 a0001c0002t0002g0163 a0001c0002t0002g0164 a0001c0002t0002g0165 a0001c0002t0002g0173 a0001c0002t0002g0174 a0001c0002t0002g0177 a0001c0002t0002g0178 a0001c0002t0002g0179 a0001c0002t0002g0180 a0001c0002t0002g0181 a0001c0002t0002g0182 a0001c0002t0002g0183 a0001c0002t0002g0184 a0001c0002t0002g0185 a0001c0002t0002g0204 a0001c0002t0002g0205 a0001c0003t0003g0039 a0001c0003t0003g0194 a0001c0003t0003g0218 a0001c0004t0001g0002 a0001c0004t0001g0123 a0001c0006t0001g0027 a0001c0006t0001g0075 a0001c0007t0001g0002 a0002c0005t0001g0106 a0002c0005t0001g0107 a0003c0010t0003g0231 a0004c0008t0003g0001	369	390	0.9462	21	c.-14 others(32): Show c.-1410_-1409insCAGCTTCTCTCCACTTGATCT		SNX32	ENSG00000172803.18	transcript	ENST00000308342.7	protein_coding					1306		chr11	TogoVar
SNX32_chr11_65828963_65858701	65839223	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02056.hp1 NA20129.hp1 HG02056.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0059 a0001c0001t0001g0090 a0001c0001t0001g0059 a0001c0001t0001g0090	2	390	0.0051	21	c.36+ others(36): Show c.36+5123_36+5124insTTTTTTTTTTTTTTTTTTTTT		SNX32	ENSG00000172803.18	transcript	ENST00000308342.7	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr11	TogoVar
SNX32_chr11_65828963_65858701	65839225	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0239 a0001c0001t0002g0239	1	390	0.0026	21	c.36+ others(36): Show c.36+5126_36+5146dupTTTTTTTTTTTTTTTTTTTTT		SNX32	ENSG00000172803.18	transcript	ENST00000308342.7	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr11	TogoVar
SNX33_chr15_75642912_75667301	75656158	T T	TGAAGAGT others(14): Show TGAAGAGTTGTTTTAGAATCAG	intron_variant intron_variant	MODIFIER	NA18963.hp2 NA18963.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0049 a0001c0001t0049	a0001c0001t0049g0080 a0001c0001t0049g0080	1	420	0.0024	21	c.147 others(38): Show c.1472-803_1472-783dupGAAGAGTTGTTTTAGAATCAG		SNX33	ENSG00000173548.9	transcript	ENST00000308527.6	protein_coding	1/1					INFO_REALIGN_3_PRIME	chr15	TogoVar
SNX4_chr3_125441650_125525202	125458814	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG01346.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0315 a0001c0001t0001g0315	1	360	0.0028	21	c.945 others(38): Show c.945-1470_945-1450dupTTTTTTTTTTTTTTTTTTTTT		SNX4	ENSG00000114520.11	transcript	ENST00000251775.9	protein_coding	10/13						chr3	TogoVar
SNX6_chr14_34556093_34635148	34557496	A A	ATTCTTCT others(14): Show ATTCTTCTTCTTCTTCTTCTTC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20752.hp2 NA20752.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0039 a0001c0002t0006g0039	1	322	0.0031	21	c.56 others(32): Show c.5625_*5626insGAAGAAGAAGAAGAAGAAGAA		SNX6	ENSG00000129515.20	transcript	ENST00000362031.10	protein_coding					3596		chr14	TogoVar
SNX6_chr14_34556093_34635148	34578937	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01255.hp2 HG01070.hp1 HG01255.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0078 a0001c0002t0002g0084 a0001c0002t0002g0078 a0001c0002t0002g0084	2	322	0.0062	21	c.834 others(38): Show c.834+2603_834+2623dupTTTTTTTTTTTTTTTTTTTTT		SNX6	ENSG00000129515.20	transcript	ENST00000362031.10	protein_coding	10/13						chr14	TogoVar
SNX7_chr1_98656721_98765500	98763439	A A	ATATATAT others(14): Show ATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18990.hp1 NA18990.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0091 a0001c0001t0001g0091	1	378	0.0027	21	c.33 others(32): Show c.3308_*3309insTATATATATATATATATATAT		SNX7	ENSG00000162627.17	transcript	ENST00000306121.8	protein_coding					2940		chr1	TogoVar
SNX7_chr1_98656721_98765500	98763441	A A	ATATATAT others(14): Show ATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG00738.hp2 HG03486.hp1 others(5): Show HG00280.hp1 HG00738.hp2 HG03486.hp1 NA18970.hp1 NA18971.hp2 NA18985.hp1 NA18989.hp1 NA18998.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0050 a0001c0001t0001g0090 a0001c0001t0001g0092 others(5): Show a0001c0001t0001g0050 a0001c0001t0001g0090 a0001c0001t0001g0092 a0001c0001t0001g0096 a0001c0001t0001g0098 a0001c0001t0001g0107 a0001c0001t0001g0199 a0001c0001t0001g0324	8	378	0.0212	21	c.33 others(32): Show c.3310_*3311insTATATATATATATATATATAT		SNX7	ENSG00000162627.17	transcript	ENST00000306121.8	protein_coding					2942		chr1	TogoVar
SNX7_chr1_98656721_98765500	98763443	A A	AAAAATAT others(14): Show AAAAATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp2 HG02683.hp1 HG00642.hp2 HG02683.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0053 a0001c0001t0001g0170 a0001c0001t0001g0053 a0001c0001t0001g0170	2	378	0.0053	21	c.33 others(32): Show c.3312_*3313insAAAATATATATATATATATAT		SNX7	ENSG00000162627.17	transcript	ENST00000306121.8	protein_coding					2944		chr1	TogoVar
SNX7_chr1_98656721_98765500	98763443	A A	AAATATAT others(14): Show AAATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02074.hp2 NA18965.hp1 NA19064.hp2 HG02074.hp2 NA18965.hp1 NA19064.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0065 a0001c0001t0001g0095 a0001c0001t0001g0097 a0001c0001t0001g0065 a0001c0001t0001g0095 a0001c0001t0001g0097	3	378	0.0079	21	c.33 others(32): Show c.3312_*3313insAATATATATATATATATATAT		SNX7	ENSG00000162627.17	transcript	ENST00000306121.8	protein_coding					2944		chr1	TogoVar
SNX7_chr1_98656721_98765500	98763443	A A	ATATATAT others(14): Show ATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01975.hp1 HG02004.hp1 NA18944.hp1 HG01975.hp1 HG02004.hp1 NA18944.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0084 a0001c0001t0001g0101 a0001c0001t0001g0106 a0001c0001t0001g0084 a0001c0001t0001g0101 a0001c0001t0001g0106	3	378	0.0079	21	c.33 others(32): Show c.3312_*3313insTATATATATATATATATATAT		SNX7	ENSG00000162627.17	transcript	ENST00000306121.8	protein_coding					2944		chr1	TogoVar
SNX9_chr6_157818246_157950077	157840420	T T	TTTCTTTC others(14): Show TTTCTTTCTTTCCTTTCCTTCC	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG02451.hp2 HG02572.hp1 others(5): Show HG01934.hp1 HG02451.hp2 HG02572.hp1 HG02976.hp2 HG03041.hp1 HG03471.hp1 HG03516.hp2 HG03540.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0006 a0001c0001 a0003c0006	a0001c0001t0001 a0003c0006t0001 a0001c0001t0001 a0003c0006t0001	a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 others(5): Show a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0142 a0001c0001t0001g0143 a0003c0006t0001g0141	8	302	0.0265	21	c.12+ others(38): Show c.12+16976_12+16977insCTTTCTTTCCTTTCCTTCCTT		SNX9	ENSG00000130340.17	transcript	ENST00000392185.8	protein_coding	1/17					INFO_REALIGN_3_PRIME	chr6	TogoVar
SOAT1_chr1_179288797_179363680	179351721	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG03209.hp1 HG02818.hp2 HG03209.hp1	a0003 a0004 a0003 a0004	a0003c0020 a0004c0010 a0003c0020 a0004c0010	a0003c0020t0030 a0004c0010t0022 a0003c0020t0030 a0004c0010t0022	a0003c0020t0030g0022 a0004c0010t0022g0364 a0003c0020t0030g0022 a0004c0010t0022g0364	2	382	0.0052	21	c.159 others(38): Show c.1596+275_1596+276insTTTTTTTTTTTTTTTTTTTTT		SOAT1	ENSG00000057252.13	transcript	ENST00000367619.8	protein_coding	15/15					INFO_REALIGN_3_PRIME	chr1	TogoVar
SOAT1_chr1_179288797_179363680	179360226	T T	TCTTAACG others(14): Show TCTTAACGCTTTTCACCTTTCA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19007.hp1 NA19007.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0105 a0001c0001t0003g0105	1	382	0.0026	21	c.65 others(32): Show c.6585_*6586insCTTAACGCTTTTCACCTTTCA		SOAT1	ENSG00000057252.13	transcript	ENST00000367619.8	protein_coding					1547		chr1	TogoVar
SOCS4_chr14_55022236_55054489	55041783	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02818.hp2 NA19089.hp1 HG02040.hp1 HG02818.hp2 NA19089.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0057 a0001c0001t0002g0161 a0001c0001t0002g0057 a0001c0001t0002g0161	3	394	0.0076	21	c.-90 others(38): Show c.-90-1163_-90-1143dupTTTTTTTTTTTTTTTTTTTTT		SOCS4	ENSG00000180008.9	transcript	ENST00000555846.2	protein_coding	2/2					INFO_REALIGN_3_PRIME	chr14	TogoVar
SOCS6_chr18_70284045_70335199	70324302	A A	AAATAATA others(14): Show AAATAATAATAATAATAATAAT	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02055.hp2 HG02257.hp1 others(2): Show HG01255.hp2 HG02055.hp2 HG02257.hp1 HG02922.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0015 a0001c0001t0002 a0001c0001t0015	a0001c0001t0002g0043 a0001c0001t0002g0138 a0001c0001t0002g0257 others(2): Show a0001c0001t0002g0043 a0001c0001t0002g0138 a0001c0001t0002g0257 a0001c0001t0002g0258 a0001c0001t0015g0113	5	358	0.0140	21	c.-12 others(38): Show c.-126-238_-126-218dupTAATAATAATAATAATAATAA		SOCS6	ENSG00000170677.6	transcript	ENST00000397942.4	protein_coding	1/1					INFO_REALIGN_3_PRIME	chr18	TogoVar
SOHLH2_chr13_36163217_36219556	36184460	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01074.hp2 HG02970.hp1 others(5): Show HG00642.hp2 HG01074.hp2 HG02970.hp1 HG03225.hp2 NA18612.hp2 NA18941.hp2 NA18967.hp1 NA19055.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0003 a0001c0005 others(1): Show a0001c0001 a0001c0003 a0001c0005 a0004c0010	a0001c0001t0001 a0001c0003t0001 a0001c0005t0001 others(1): Show a0001c0001t0001 a0001c0003t0001 a0001c0005t0001 a0004c0010t0001	a0001c0001t0001g0182 a0001c0003t0001g0033 a0001c0003t0001g0221 others(4): Show a0001c0001t0001g0182 a0001c0003t0001g0033 a0001c0003t0001g0221 a0001c0003t0001g0234 a0001c0003t0001g0304 a0001c0005t0001g0245 a0004c0010t0001g0235	8	420	0.0191	21	c.641 others(38): Show c.641+5485_641+5486insAAAAAAAAAAAAAAAAAAAAA		SOHLH2	ENSG00000120669.16	transcript	ENST00000379881.8	protein_coding	6/10						chr13	TogoVar
SON_chr21_33538038_33582481	33555090	A A	AAGCCGCC others(14): Show AAGCCGCCGCAGCCGCACCCCC	disruptive_inframe_insertion disruptive_inframe_insertion	MODERATE	HG02071.hp1 HG03195.hp2 NA18998.hp2 others(1): Show HG02071.hp1 HG03195.hp2 NA18998.hp2 NA20805.hp2	a0008 a0008	a0008c0013 a0008c0018 a0008c0024 a0008c0013 a0008c0018 a0008c0024	a0008c0013t0001 a0008c0018t0001 a0008c0024t0001 a0008c0013t0001 a0008c0018t0001 a0008c0024t0001	a0008c0013t0001g0056 a0008c0013t0001g0079 a0008c0018t0001g0002 others(1): Show a0008c0013t0001g0056 a0008c0013t0001g0079 a0008c0018t0001g0002 a0008c0024t0001g0002	4	364	0.0110	21	c.593 others(30): Show c.5931_5951dupCAGCCGCACCCCCAGCCGCCG	p.Arg others(36): Show p.Arg1984_Ser1985insSerArgThrProSerArgArg	SON	ENSG00000159140.23	transcript	ENST00000356577.10	protein_coding	3/12	6007/8393	5952/7281	1984/2426		INFO_REALIGN_3_PRIME	chr21	TogoVar
SORBS1_chr10_95306773_95566371	95365218	T T	TGTGTGTG others(14): Show TGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	NA19003.hp1 NA19003.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0208 a0001c0002t0001g0208	1	300	0.0033	21	c.195 others(40): Show c.1955+2431_1955+2432insCACACACACACACACACACAC		SORBS1	ENSG00000095637.23	transcript	ENST00000371247.7	protein_coding	22/32						chr10	TogoVar
SORBS2_chr4_185580523_185817194	185709304	C C	CCTTTTTT others(14): Show CCTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01928.hp1 HG01978.hp2 others(7): Show HG01106.hp2 HG01928.hp1 HG01978.hp2 HG02071.hp2 HG02148.hp1 HG02602.hp2 HG03688.hp1 HG04115.hp1 NA18945.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0015 a0001c0001t0065 a0001c0003t0011	a0001c0001t0001g0072 a0001c0001t0001g0229 a0001c0001t0001g0250 others(7): Show a0001c0001t0001g0072 a0001c0001t0001g0229 a0001c0001t0001g0250 a0001c0001t0002g0155 a0001c0001t0002g0181 a0001c0001t0004g0113 a0001c0001t0004g0203 a0001c0001t0015g0246 a0001c0001t0065g0180 a0001c0003t0011g0169	10	312	0.0321	21	c.-40 others(40): Show c.-40-18694_-40-18693insAAAAAAAAAAAAAAAAAAAAG		SORBS2	ENSG00000154556.20	transcript	ENST00000695409.1	protein_coding	3/26						chr4	TogoVar
SORBS2_chr4_185580523_185817194	185709304	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02559.hp2 HG03540.hp1 others(2): Show HG02486.hp1 HG02559.hp2 HG03540.hp1 HG06807.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 others(1): Show a0001c0001 a0001c0002 a0001c0005 a0001c0009	a0001c0001t0001 a0001c0002t0003 a0001c0002t0034 others(2): Show a0001c0001t0001 a0001c0002t0003 a0001c0002t0034 a0001c0005t0003 a0001c0009t0004	a0001c0001t0001g0216 a0001c0002t0003g0174 a0001c0002t0034g0004 others(2): Show a0001c0001t0001g0216 a0001c0002t0003g0174 a0001c0002t0034g0004 a0001c0005t0003g0078 a0001c0009t0004g0215	5	312	0.0160	21	c.-40 others(40): Show c.-40-18694_-40-18693insAAAAAAAAAAAAAAAAAAAAA		SORBS2	ENSG00000154556.20	transcript	ENST00000695409.1	protein_coding	3/26						chr4	TogoVar
SORBS2_chr4_185580523_185817194	185751190	A A	AAAAAAAA others(14): Show AAAAAAAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01081.hp1 HG01106.hp1 others(21): Show HG00738.hp1 HG01081.hp1 HG01106.hp1 HG01106.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01496.hp1 HG01515.hp1 HG01517.hp2 HG01975.hp1 HG01993.hp1 HG02040.hp1 HG02258.hp2 HG02451.hp1 HG02698.hp2 HG02897.hp1 HG02970.hp1 HG03017.hp1 HG03017.hp2 HG03704.hp1 HG03710.hp2 HG06807.hp2 NA18747.hp2	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0011	a0001c0001 a0001c0002 a0001c0006 others(6): Show a0001c0001 a0001c0002 a0001c0006 a0001c0010 a0001c0011 a0001c0028 a0002c0012 a0004c0016 a0011c0039	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(14): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0012 a0001c0001t0015 a0001c0001t0029 a0001c0001t0030 a0001c0001t0065 a0001c0002t0034 a0001c0006t0012 a0001c0010t0029 a0001c0011t0001 a0001c0028t0005 a0002c0012t0005 a0004c0016t0021 a0011c0039t0003	a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0003g0242 others(21): Show a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0003g0242 a0001c0001t0005g0061 a0001c0001t0005g0071 a0001c0001t0007g0270 a0001c0001t0012g0075 a0001c0001t0012g0081 a0001c0001t0012g0298 a0001c0001t0012g0299 a0001c0001t0015g0208 a0001c0001t0015g0253 a0001c0001t0015g0268 a0001c0001t0029g0271 a0001c0001t0030g0272 a0001c0001t0065g0180 a0001c0002t0034g0004 a0001c0006t0012g0286 a0001c0010t0029g0043 a0001c0011t0001g0057 a0001c0028t0005g0034 a0002c0012t0005g0235 a0004c0016t0021g0224 a0011c0039t0003g0312	24	312	0.0769	21	c.-96 others(40): Show c.-96-17037_-96-17036insCTTTTTTTTTTTTTTTTTTTT		SORBS2	ENSG00000154556.20	transcript	ENST00000695409.1	protein_coding	2/26						chr4	TogoVar
SORCS1_chr10_106568663_107169706	106891504	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00609.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0014 a0001c0004t0014	a0001c0004t0014g0088 a0001c0004t0014g0088	1	130	0.0077	21	c.627 others(40): Show c.627-61832_627-61831insAAAAAAAAAAAAAAAAAAAAA		SORCS1	ENSG00000108018.17	transcript	ENST00000263054.11	protein_coding	2/25						chr10	TogoVar

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