Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TAS2R13_chr12_10902926_10914562	10903931	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00735.hp2 HG00741.hp2 HG01074.hp1 others(52): Show HG00735.hp2 HG00741.hp2 HG01074.hp1 HG01358.hp1 HG01358.hp2 HG02027.hp1 HG02027.hp2 HG02074.hp1 HG02074.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02155.hp2 HG02300.hp1 HG02735.hp2 HG03239.hp2 HG03491.hp1 HG03491.hp2 HG03710.hp1 HG03834.hp2 HG04184.hp1 HG04228.hp1 HG04228.hp2 NA18940.hp1 NA18942.hp1 NA18945.hp2 NA18949.hp1 NA18950.hp1 NA18950.hp2 NA18954.hp2 NA18956.hp1 NA18961.hp1 NA18961.hp2 NA18967.hp2 NA18969.hp2 NA18973.hp2 NA18977.hp2 NA18978.hp2 NA18979.hp2 NA18983.hp1 NA18985.hp1 NA18986.hp2 NA18990.hp2 NA18995.hp2 NA18999.hp1 NA19004.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19009.hp2 NA19011.hp2 NA19067.hp1 NA19083.hp1 NA19090.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	55	407	0.1351	21	c.44 others(32): Show c.4435_*4455dupTTTTTTTTTTTTTTTTTTTTT	TAS2R13	ENSG00000212128.2	transcript	ENST00000390677.2	protein_coding		3994		chr12	TogoVar
TAS2R1_chr5_9622347_9635351	9633285	G G	GTATATAT others(14): Show GTATATATTATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19009.hp2 NA19068.hp1 NA19085.hp1 others(1): Show NA19009.hp2 NA19068.hp1 NA19085.hp1 NA19091.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0017 a0002c0002t0003 a0002c0002t0017	a0002c0002t0003g0000 a0002c0002t0017g0000 a0002c0002t0003g0000 a0002c0002t0017g0000	4	458	0.0087	21	c.-32 others(32): Show c.-3254_-3253insTATATATATATATAATATATA	TAS2R1	ENSG00000169777.7	transcript	ENST00000382492.4	protein_coding		2935		chr5	TogoVar
TASOR2_chr10_5679838_5768740	5684944	C C	CGGGCGGC others(14): Show CGGGCGGCCGCGGCGTCCCTGT	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01928.hp2 HG01928.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0017 a0003c0003t0017	a0003c0003t0017g0096 a0003c0003t0017g0096	1	390	0.0026	21	c.-59 others(30): Show c.-591_-571dupGGGCGGCCGCGGCGTCCCTGT	TASOR2	ENSG00000108021.22	transcript	ENST00000695737.1	protein_coding	1/22	35677	INFO_REALIGN_3_PRIME	chr10	TogoVar
TASP1_chr20_13384394_13643932	13387184	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp2 HG02280.hp1 HG02486.hp2 others(2): Show HG01243.hp2 HG02280.hp1 HG02486.hp2 HG02723.hp2 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0029 a0001c0001t0001g0091 a0001c0001t0001g0092 others(2): Show a0001c0001t0001g0029 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0174	5	290	0.0172	21	c.31 others(32): Show c.3175_*3176insAAAAAAAAAAAAAAAAAAAAA	TASP1	ENSG00000089123.16	transcript	ENST00000337743.9	protein_coding		2209		chr20	TogoVar
TATDN2_chr3_10243459_10286218	10257294	T T	TATATATA others(14): Show TATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18941.hp1 NA18941.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0007 a0004c0004t0007	a0004c0004t0007g0075 a0004c0004t0007g0075	1	366	0.0027	21	c.415 others(38): Show c.415-2843_415-2842insATATATATATATATATATATA	TATDN2	ENSG00000157014.11	transcript	ENST00000448281.7	protein_coding	2/7			chr3	TogoVar
TATDN2_chr3_10243459_10286218	10257841	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0004 a0003c0003t0004	a0003c0003t0004g0111 a0003c0003t0004g0111	1	366	0.0027	21	c.415 others(38): Show c.415-2281_415-2261dupTTTTTTTTTTTTTTTTTTTTT	TATDN2	ENSG00000157014.11	transcript	ENST00000448281.7	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
TAT_chr16_71560660_71582092	71579084	A A	AAAAAAAA others(14): Show AAAAAAAAAAAAAAAAATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00609.hp1 NA18906.hp2 NA20300.hp2 HG00609.hp1 NA18906.hp2 NA20300.hp2	a0002 a0002	a0002c0002 a0002c0004 a0002c0002 a0002c0004	a0002c0002t0011 a0002c0004t0003 a0002c0002t0011 a0002c0004t0003	a0002c0002t0011g0014 a0002c0004t0003g0008 a0002c0002t0011g0014 a0002c0004t0003g0008	3	372	0.0081	21	c.-20 others(32): Show c.-2089_-2088insATATATTTTTTTTTTTTTTTT	TAT	ENSG00000198650.11	transcript	ENST00000355962.5	protein_coding		1993		chr16	TogoVar
TAT_chr16_71560660_71582092	71579084	A A	AAAAAAAA others(14): Show AAAAAAAAAAAAAAATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02970.hp2 HG03453.hp1 NA18968.hp1 HG02970.hp2 HG03453.hp1 NA18968.hp1	a0002 a0002	a0002c0002 a0002c0004 a0002c0002 a0002c0004	a0002c0002t0011 a0002c0004t0003 a0002c0002t0011 a0002c0004t0003	a0002c0002t0011g0014 a0002c0004t0003g0008 a0002c0002t0011g0014 a0002c0004t0003g0008	3	372	0.0081	21	c.-20 others(32): Show c.-2089_-2088insATATATATTTTTTTTTTTTTT	TAT	ENSG00000198650.11	transcript	ENST00000355962.5	protein_coding		1993		chr16	TogoVar
TAT_chr16_71560660_71582092	71579084	A A	AAAAAAAA others(14): Show AAAAAAAAAAAAATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0033 a0002c0004t0033	a0002c0004t0033g0104 a0002c0004t0033g0104	1	372	0.0027	21	c.-20 others(32): Show c.-2089_-2088insATATATATATTTTTTTTTTTT	TAT	ENSG00000198650.11	transcript	ENST00000355962.5	protein_coding		1993		chr16	TogoVar
TAT_chr16_71560660_71582092	71579084	A A	AAAAAAAA others(14): Show AAAAAAAAATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0053 a0002c0004t0053	a0002c0004t0053g0106 a0002c0004t0053g0106	1	372	0.0027	21	c.-20 others(32): Show c.-2089_-2088insATATATATATATATTTTTTTT	TAT	ENSG00000198650.11	transcript	ENST00000355962.5	protein_coding		1993		chr16	TogoVar
TAT_chr16_71560660_71582092	71579084	A A	AAAAAAAT others(14): Show AAAAAAATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0035 a0001c0001t0035	a0001c0001t0035g0086 a0001c0001t0035g0086	1	372	0.0027	21	c.-20 others(32): Show c.-2089_-2088insATATATATATATATATTTTTT	TAT	ENSG00000198650.11	transcript	ENST00000355962.5	protein_coding		1993		chr16	TogoVar
TAT_chr16_71560660_71582092	71579084	A A	AAAAATAT others(14): Show AAAAATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0014 a0001c0003t0014	a0001c0003t0014g0047 a0001c0003t0014g0047	1	372	0.0027	21	c.-20 others(32): Show c.-2089_-2088insATATATATATATATATATTTT	TAT	ENSG00000198650.11	transcript	ENST00000355962.5	protein_coding		1993		chr16	TogoVar
TAX1BP1_chr7_27735162_27834767	27745559	T T	TTAGCTAT others(14): Show TTAGCTATATTGTAATTAATAA	intron_variant intron_variant	MODIFIER	NA18953.hp1 NA18953.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0104 a0001c0001t0001g0104	1	362	0.0028	21	c.-7- others(36): Show c.-7-2959_-7-2958insTAGCTATATTGTAATTAATAA	TAX1BP1	ENSG00000106052.14	transcript	ENST00000396319.7	protein_coding	1/16			chr7	TogoVar
TBC1D10A_chr22_30286990_30331941	30292203	T T	TCAGGCAG others(14): Show TCAGGCAGAATCTGTGTTGGAC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18942.hp2 NA19009.hp1 NA18942.hp2 NA19009.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0193 a0001c0001t0005g0195 a0001c0001t0005g0193 a0001c0001t0005g0195	2	388	0.0052	21	c.15 others(30): Show c.151_*171dupGTCCAACACAGATTCTGCCTG	TBC1D10A	ENSG00000099992.16	transcript	ENST00000215790.12	protein_coding	9/9	171		chr22	TogoVar
TBC1D14_chr4_6904826_7038114	6933263	C C	CCCTCCCC others(14): Show CCCTCCCCCTCCCCCTCCCCCT	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0032 a0001c0003t0003g0032	1	304	0.0033	21	c.722 others(38): Show c.722+9153_722+9154insCTCCCCCTCCCCCTCCCCCTC	TBC1D14	ENSG00000132405.19	transcript	ENST00000409757.9	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr4	TogoVar
TBC1D14_chr4_6904826_7038114	6933275	T T	TCCCCTCC others(14): Show TCCCCTCCCCTCCCTTCCCCTC	intron_variant intron_variant	MODIFIER	NA18998.hp1 NA18998.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0111 a0001c0001t0001g0111	1	304	0.0033	21	c.722 others(38): Show c.722+9168_722+9169insTCCCCTCCCTTCCCCTCCCCC	TBC1D14	ENSG00000132405.19	transcript	ENST00000409757.9	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr4	TogoVar
TBC1D14_chr4_6904826_7038114	6935557	T T	TCCTCCTC others(14): Show TCCTCCTCTCCCTTTCCCTCTC	intron_variant intron_variant	MODIFIER	NA18962.hp2 NA18962.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0221 a0001c0001t0002g0221	1	304	0.0033	21	c.722 others(40): Show c.722+11451_722+11471dupCTCTCCCTTTCCCTCTCCCTC	TBC1D14	ENSG00000132405.19	transcript	ENST00000409757.9	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr4	TogoVar
TBC1D14_chr4_6904826_7038114	6977063	T T	TCCTCTCC others(14): Show TCCTCTCCCTCTCCCTCCTCTC	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02040.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0053 a0001c0001t0001g0053	1	304	0.0033	21	c.843 others(38): Show c.843+9655_843+9656insCTCTCCCTCTCCCTCTCCCTC	TBC1D14	ENSG00000132405.19	transcript	ENST00000409757.9	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr4	TogoVar
TBC1D16_chr17_79927343_80040872	79930027	T T	TCCCCTCC others(14): Show TCCCCTCCCCTCTCCTCTCCTC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19005.hp2 NA19005.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0254 a0001c0001t0009g0254	1	334	0.0030	21	c.10 others(34): Show c.10831_*10832insGAGGAGAGGAGAGGGGAGGGG	TBC1D16	ENSG00000167291.16	transcript	ENST00000310924.7	protein_coding		2315		chr17	TogoVar
TBC1D16_chr17_79927343_80040872	80037688	A A	AAAAAAAA others(14): Show AAAAAAAAAAATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02976.hp1 NA19043.hp1 HG02976.hp1 NA19043.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0007 a0001c0002t0122 a0001c0002t0007 a0001c0002t0122	a0001c0002t0007g0158 a0001c0002t0122g0160 a0001c0002t0007g0158 a0001c0002t0122g0160	2	334	0.0060	21	c.-19 others(32): Show c.-1957_-1956insATATATATATATTTTTTTTTT	TBC1D16	ENSG00000167291.16	transcript	ENST00000310924.7	protein_coding		1817		chr17	TogoVar
TBC1D16_chr17_79927343_80040872	80037688	A A	AAAAATAT others(14): Show AAAAATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0125 a0001c0008t0125	a0001c0008t0125g0097 a0001c0008t0125g0097	1	334	0.0030	21	c.-19 others(32): Show c.-1957_-1956insATATATATATATATATATTTT	TBC1D16	ENSG00000167291.16	transcript	ENST00000310924.7	protein_coding		1817		chr17	TogoVar
TBC1D16_chr17_79927343_80040872	80037688	A A	AGATATAT others(14): Show AGATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18948.hp2 NA18948.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0024	a0001c0001t0024g0027 a0001c0001t0024g0027	1	334	0.0030	21	c.-19 others(32): Show c.-1957_-1956insATATATATATATATATATATC	TBC1D16	ENSG00000167291.16	transcript	ENST00000310924.7	protein_coding		1817		chr17	TogoVar
TBC1D19_chr4_26579084_26761223	26656987	T T	TCTCCTTC others(14): Show TCTCCTTCTCCTTCTCCTTCTC	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00673.hp1 others(41): Show HG00099.hp1 HG00140.hp2 HG00673.hp1 HG00735.hp1 HG02055.hp2 HG02071.hp2 HG02080.hp2 HG02165.hp2 HG02280.hp2 HG02486.hp1 HG02622.hp2 HG02630.hp2 HG02698.hp1 HG03579.hp1 HG03710.hp2 HG03927.hp2 HG04184.hp1 HG04204.hp2 NA18612.hp2 NA18906.hp2 NA18941.hp2 NA18945.hp1 NA18946.hp1 NA18948.hp2 NA18950.hp2 NA18953.hp1 NA18955.hp2 NA18956.hp1 NA18957.hp2 NA18960.hp1 NA18962.hp1 NA18972.hp2 NA18973.hp2 NA18978.hp2 NA18987.hp1 NA18993.hp1 NA19009.hp1 NA19012.hp1 NA19062.hp1 NA19081.hp1 NA19083.hp2 NA19085.hp2 NA19087.hp1 NA19089.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0002 a0001c0001t0002 a0001c0002t0002	a0001c0001t0002g0152 a0001c0001t0002g0154 a0001c0002t0002g0203 others(41): Show a0001c0001t0002g0152 a0001c0001t0002g0154 a0001c0002t0002g0203 a0001c0002t0002g0221 a0001c0002t0002g0223 a0001c0002t0002g0224 a0001c0002t0002g0225 a0001c0002t0002g0227 a0001c0002t0002g0228 a0001c0002t0002g0229 a0001c0002t0002g0232 a0001c0002t0002g0233 a0001c0002t0002g0234 a0001c0002t0002g0235 a0001c0002t0002g0238 a0001c0002t0002g0242 a0001c0002t0002g0243 a0001c0002t0002g0244 a0001c0002t0002g0245 a0001c0002t0002g0246 a0001c0002t0002g0247 a0001c0002t0002g0248 a0001c0002t0002g0249 a0001c0002t0002g0252 a0001c0002t0002g0255 a0001c0002t0002g0257 a0001c0002t0002g0260 a0001c0002t0002g0261 a0001c0002t0002g0262 a0001c0002t0002g0265 a0001c0002t0002g0266 a0001c0002t0002g0267 a0001c0002t0002g0269 a0001c0002t0002g0275 a0001c0002t0002g0281 a0001c0002t0002g0282 a0001c0002t0002g0287 a0001c0002t0002g0297 a0001c0002t0002g0300 a0001c0002t0002g0301 a0001c0002t0002g0303 a0001c0002t0002g0305 a0001c0002t0002g0306 a0001c0002t0002g0309	44	310	0.1419	21	c.481 others(38): Show c.481-2608_481-2607insCCTTCTCCTTCTCCTTCTCCT	TBC1D19	ENSG00000109680.11	transcript	ENST00000264866.9	protein_coding	7/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
TBC1D19_chr4_26579084_26761223	26656987	T T	TCTTCTTC others(14): Show TCTTCTTCTTCTTCTCCTTCTC	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02258.hp2 HG02559.hp2 others(7): Show HG01243.hp2 HG02258.hp2 HG02559.hp2 HG02647.hp2 HG02717.hp1 HG02896.hp1 HG02897.hp2 HG03139.hp1 HG06807.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0109 a0001c0001t0001g0112 a0001c0001t0001g0168 others(7): Show a0001c0001t0001g0109 a0001c0001t0001g0112 a0001c0001t0001g0168 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0180 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0208 a0001c0001t0001g0212	10	310	0.0323	21	c.481 others(38): Show c.481-2605_481-2604insTCTTCTTCTCCTTCTCCTTCT	TBC1D19	ENSG00000109680.11	transcript	ENST00000264866.9	protein_coding	7/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
TBC1D1_chr4_37886084_38144173	37891066	T T	TTCCTCCT others(14): Show TTCCTCCTCCTCCTCCTCCTCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02896.hp1 HG02897.hp2 HG02896.hp1 HG02897.hp2	a0004 a0004	a0004c0003 a0004c0003	a0004c0003t0001 a0004c0003t0001	a0004c0003t0001g0070 a0004c0003t0001g0071 a0004c0003t0001g0070 a0004c0003t0001g0071	2	310	0.0065	21	c.-37 others(30): Show c.-376_-375insTCCTCCTCCTCCTCCTCCTCC	TBC1D1	ENSG00000065882.18	transcript	ENST00000698857.1	protein_coding		17		chr4	TogoVar
TBC1D20_chr20_430480_467533	466018	T T	TAAAAAAA others(14): Show TAAAAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02109.hp1 HG03516.hp1 HG03942.hp2 HG02109.hp1 HG03516.hp1 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0013 a0001c0001t0001 a0001c0001t0013	a0001c0001t0001g0062 a0001c0001t0013g0238 a0001c0001t0013g0239 a0001c0001t0001g0062 a0001c0001t0013g0238 a0001c0001t0013g0239	3	402	0.0075	21	c.-36 others(32): Show c.-3614_-3613insTTTTTTTTTTTTTTTTTTTTT	TBC1D20	ENSG00000125875.15	transcript	ENST00000354200.5	protein_coding		3486		chr20	TogoVar
TBC1D21_chr15_73868564_73894214	73888677	C C	CCTCCTCC others(14): Show CCTCCTCCTCTTCCTCCTCGTA	intron_variant intron_variant	MODIFIER	NA18962.hp2 NA18962.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0113 a0001c0001t0001g0113	1	382	0.0026	21	c.978 others(36): Show c.978+177_978+197dupCTCCTCGTACTCCTCCTCTTC	TBC1D21	ENSG00000167139.9	transcript	ENST00000300504.7	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr15	TogoVar
TBC1D21_chr15_73868564_73894214	73888716	T T	TCTCCTCC others(14): Show TCTCCTCCTCCTCTTCTTCCTC	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0087 a0001c0001t0001g0087	1	382	0.0026	21	c.978 others(36): Show c.978+216_978+236dupTTCTTCCTCCTCCTCCTCCTC	TBC1D21	ENSG00000167139.9	transcript	ENST00000300504.7	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr15	TogoVar
TBC1D26_chr17_15727283_15749782	15747774	A A	AAAAAAAA others(14): Show AAAAAAAAAAAAATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19010.hp1 NA19010.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0002 a0002c0002t0002g0002	1	464	0.0022	21	c.31 others(32): Show c.3182_*3183insAAAAAAAAAAAATATATATAT	TBC1D26	ENSG00000214946.15	transcript	ENST00000437605.4	protein_coding		2993		chr17	TogoVar
TBC1D26_chr17_15727283_15749782	15747774	A A	AAAAAAAA others(14): Show AAAAAAAAATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03831.hp2 NA19077.hp1 HG03831.hp2 NA19077.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0002 a0002c0002t0002g0004 a0002c0002t0002g0002 a0002c0002t0002g0004	2	464	0.0043	21	c.31 others(32): Show c.3182_*3183insAAAAAAAATATATATATATAT	TBC1D26	ENSG00000214946.15	transcript	ENST00000437605.4	protein_coding		2993		chr17	TogoVar
TBC1D26_chr17_15727283_15749782	15747774	A A	AAAAAAAT others(14): Show AAAAAAATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19009.hp2 NA19009.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0002 a0002c0002t0002g0002	1	464	0.0022	21	c.31 others(32): Show c.3182_*3183insAAAAAATATATATATATATAT	TBC1D26	ENSG00000214946.15	transcript	ENST00000437605.4	protein_coding		2993		chr17	TogoVar
TBC1D2B_chr15_77989985_78082711	77992795	G G	GCCCCCCC others(14): Show GCCCCCCCCACTCCCCCCCACT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18956.hp2 NA18956.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0034 a0002c0003t0034	a0002c0003t0034g0235 a0002c0003t0034g0235	1	280	0.0036	21	c.53 others(32): Show c.5364_*5365insAGTGGGGGGGAGTGGGGGGGG	TBC1D2B	ENSG00000167202.12	transcript	ENST00000300584.8	protein_coding		2189		chr15	TogoVar
TBC1D2B_chr15_77989985_78082711	77992795	G G	GCCCCCCC others(14): Show GCCCCCCCCCACTCCCCCCACT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20905.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0120 a0001c0001t0002g0120	1	280	0.0036	21	c.53 others(32): Show c.5364_*5365insAGTGGGGGGAGTGGGGGGGGG	TBC1D2B	ENSG00000167202.12	transcript	ENST00000300584.8	protein_coding		2189		chr15	TogoVar
TBC1D2B_chr15_77989985_78082711	77992805	T T	TCCCCCCA others(14): Show TCCCCCCACTCCCCCCACTCCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03710.hp1 HG03710.hp1	a0002 a0002	a0002c0014 a0002c0014	a0002c0014t0001 a0002c0014t0001	a0002c0014t0001g0253 a0002c0014t0001g0253	1	280	0.0036	21	c.53 others(32): Show c.5354_*5355insGGGAGTGGGGGGAGTGGGGGG	TBC1D2B	ENSG00000167202.12	transcript	ENST00000300584.8	protein_coding		2179		chr15	TogoVar
TBC1D2B_chr15_77989985_78082711	77992805	T T	TCCCCCCA others(14): Show TCCCCCCACTCCCCCCCACTCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0045 a0002c0003t0045	a0002c0003t0045g0268 a0002c0003t0045g0268	1	280	0.0036	21	c.53 others(32): Show c.5334_*5354dupGGAGTGGGGGGGAGTGGGGGG	TBC1D2B	ENSG00000167202.12	transcript	ENST00000300584.8	protein_coding		2179		chr15	TogoVar
TBC1D2B_chr15_77989985_78082711	77992814	T T	TCCCCCCA others(14): Show TCCCCCCACTCCCCCCCCACTC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18980.hp2 NA18980.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0216 a0002c0003t0001g0216	1	280	0.0036	21	c.53 others(32): Show c.5345_*5346insGAGTGGGGGGGGAGTGGGGGG	TBC1D2B	ENSG00000167202.12	transcript	ENST00000300584.8	protein_coding		2170		chr15	TogoVar
TBC1D2B_chr15_77989985_78082711	77992835	T T	TCCCCCCC others(14): Show TCCCCCCCCACTCCACTCCCCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0009 a0002c0003t0009	a0002c0003t0009g0258 a0002c0003t0009g0258	1	280	0.0036	21	c.53 others(32): Show c.5324_*5325insGGGGGAGTGGAGTGGGGGGGG	TBC1D2B	ENSG00000167202.12	transcript	ENST00000300584.8	protein_coding		2149		chr15	TogoVar
TBC1D2B_chr15_77989985_78082711	77992871	T T	TCCCCCCA others(14): Show TCCCCCCACTCCCCCCCCACTC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18959.hp1 NA18959.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0114 a0001c0001t0008g0114	1	280	0.0036	21	c.52 others(32): Show c.5288_*5289insGAGTGGGGGGGGAGTGGGGGG	TBC1D2B	ENSG00000167202.12	transcript	ENST00000300584.8	protein_coding		2113		chr15	TogoVar
TBC1D2B_chr15_77989985_78082711	77992871	T T	TCCCCCCC others(14): Show TCCCCCCCACTCCCCCCCACTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01175.hp2 HG01175.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0150 a0001c0001t0022g0150	1	280	0.0036	21	c.52 others(32): Show c.5288_*5289insGAGTGGGGGGGAGTGGGGGGG	TBC1D2B	ENSG00000167202.12	transcript	ENST00000300584.8	protein_coding		2113		chr15	TogoVar
TBC1D2B_chr15_77989985_78082711	77992880	T T	TCCCCCCC others(14): Show TCCCCCCCACTCCCCCCCACTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0255 a0002c0003t0001g0255	1	280	0.0036	21	c.52 others(32): Show c.5279_*5280insGAGTGGGGGGGAGTGGGGGGG	TBC1D2B	ENSG00000167202.12	transcript	ENST00000300584.8	protein_coding		2104		chr15	TogoVar
TBC1D2B_chr15_77989985_78082711	77993129	C C	CCCCTACG others(14): Show CCCCTACGCCCTACGCCCTACG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00423.hp1 HG01358.hp1 others(15): Show HG00140.hp1 HG00423.hp1 HG01358.hp1 HG02027.hp1 HG02129.hp2 HG02145.hp1 HG03017.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp2 HG06807.hp2 NA18956.hp1 NA18977.hp1 NA18977.hp2 NA19030.hp1 NA19066.hp1 NA19067.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0004 a0001c0001t0008 others(4): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0008 a0001c0001t0012 a0001c0001t0018 a0001c0001t0043 a0001c0002t0003	a0001c0001t0002g0123 a0001c0001t0002g0130 a0001c0001t0002g0138 others(14): Show a0001c0001t0002g0123 a0001c0001t0002g0130 a0001c0001t0002g0138 a0001c0001t0002g0140 a0001c0001t0002g0142 a0001c0001t0002g0145 a0001c0001t0004g0177 a0001c0001t0004g0180 a0001c0001t0004g0182 a0001c0001t0008g0132 a0001c0001t0012g0006 a0001c0001t0012g0173 a0001c0001t0012g0181 a0001c0001t0018g0178 a0001c0001t0043g0189 a0001c0002t0003g0003 a0001c0002t0003g0079	18	280	0.0643	21	c.50 others(32): Show c.5010_*5030dupCGTAGGGCGTAGGGCGTAGGG	TBC1D2B	ENSG00000167202.12	transcript	ENST00000300584.8	protein_coding		1855		chr15	TogoVar
TBC1D2B_chr15_77989985_78082711	77996346	A A	AGGGCAGC others(14): Show AGGGCAGCTGGTGCTGGCCCAC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0032 a0001c0010t0032	a0001c0010t0032g0108 a0001c0010t0032g0108	1	280	0.0036	21	c.18 others(32): Show c.1813_*1814insGTGGGCCAGCACCAGCTGCCC	TBC1D2B	ENSG00000167202.12	transcript	ENST00000300584.8	protein_coding	13/13	1813		chr15	TogoVar
TBC1D2B_chr15_77989985_78082711	78040902	G G	GAAAGAGA others(14): Show GAAAGAGAGAGAGAGAGAAAGA	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01515.hp2 HG01433.hp1 HG01515.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0136 a0001c0001t0008g0146 a0001c0001t0008g0136 a0001c0001t0008g0146	2	280	0.0071	21	c.683 others(38): Show c.683+3997_683+3998insTCTTTCTCTCTCTCTCTCTTT	TBC1D2B	ENSG00000167202.12	transcript	ENST00000300584.8	protein_coding	3/12			chr15	TogoVar
TBC1D30_chr12_64819647_64886033	64840004	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02723.hp1 NA19240.hp2 NA20300.hp2 HG02723.hp1 NA19240.hp2 NA20300.hp2	a0002 a0002	a0002c0002 a0002c0005 a0002c0010 a0002c0002 a0002c0005 a0002c0010	a0002c0002t0020 a0002c0005t0006 a0002c0010t0006 a0002c0002t0020 a0002c0005t0006 a0002c0010t0006	a0002c0002t0020g0174 a0002c0005t0006g0237 a0002c0010t0006g0235 a0002c0002t0020g0174 a0002c0005t0006g0237 a0002c0010t0006g0235	3	298	0.0101	21	c.932 others(38): Show c.932+1157_932+1177dupAAAAAAAAAAAAAAAAAAAAA	TBC1D30	ENSG00000111490.15	transcript	ENST00000539867.6	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr12	TogoVar
TBC1D31_chr8_123067707_123157153	123127261	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0001 a0001c0009t0001	a0001c0009t0001g0163 a0001c0009t0001g0163	1	322	0.0031	21	c.188 others(38): Show c.1884+580_1884+600dupTTTTTTTTTTTTTTTTTTTTT	TBC1D31	ENSG00000156787.17	transcript	ENST00000287380.6	protein_coding	13/21		INFO_REALIGN_3_PRIME	chr8	TogoVar
TBC1D31_chr8_123067707_123157153	123141123	G G	GAAATACA others(14): Show GAAATACAAAGGAATTTCCTCA	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02976.hp2 HG03195.hp1 HG02486.hp2 HG02976.hp2 HG03195.hp1	a0006 a0006	a0006c0011 a0006c0011	a0006c0011t0001 a0006c0011t0001	a0006c0011t0001g0078 a0006c0011t0001g0079 a0006c0011t0001g0080 a0006c0011t0001g0078 a0006c0011t0001g0079 a0006c0011t0001g0080	3	322	0.0093	21	c.264 others(38): Show c.2640+236_2640+237insTTCCTCAAAATACAAAGGAAT	TBC1D31	ENSG00000156787.17	transcript	ENST00000287380.6	protein_coding	18/21		INFO_REALIGN_3_PRIME	chr8	TogoVar
TBC1D8_chr2_101002228_101156382	101054672	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00423.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0089 a0002c0002t0002g0089	1	332	0.0030	21	c.403 others(36): Show c.403-357_403-337dupAAAAAAAAAAAAAAAAAAAAA	TBC1D8	ENSG00000204634.13	transcript	ENST00000409318.2	protein_coding	3/19			chr2	TogoVar
TBC1D8_chr2_101002228_101156382	101095249	T T	TTTATTAT others(14): Show TTTATTATTATTATTATTATTA	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00438.hp2 HG00639.hp1 others(50): Show HG00408.hp2 HG00438.hp2 HG00639.hp1 HG01099.hp2 HG01192.hp1 HG01256.hp1 HG01257.hp2 HG01928.hp1 HG01975.hp1 HG02015.hp1 HG02040.hp1 HG02132.hp1 HG02148.hp1 HG02258.hp1 HG02273.hp1 HG02572.hp2 HG02602.hp2 HG02717.hp1 HG03041.hp2 HG03239.hp2 HG03927.hp2 NA18612.hp1 NA18939.hp1 NA18941.hp1 NA18950.hp2 NA18953.hp2 NA18959.hp1 NA18961.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18969.hp1 NA18970.hp2 NA18971.hp1 NA18974.hp2 NA18982.hp1 NA18983.hp2 NA18988.hp2 NA18991.hp1 NA18995.hp1 NA19000.hp1 NA19009.hp1 NA19056.hp1 NA19065.hp1 NA19067.hp1 NA19077.hp1 NA19082.hp2 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19088.hp1 NA19091.hp1	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0008 a0015	a0001c0001 a0001c0023 a0002c0002 others(4): Show a0001c0001 a0001c0023 a0002c0002 a0002c0003 a0004c0005 a0008c0015 a0015c0022	a0001c0001t0001 a0001c0023t0001 a0002c0002t0002 others(4): Show a0001c0001t0001 a0001c0023t0001 a0002c0002t0002 a0002c0003t0001 a0004c0005t0001 a0008c0015t0001 a0015c0022t0001	a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 others(50): Show a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0132 a0001c0001t0001g0135 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0157 a0001c0001t0001g0172 a0001c0001t0001g0174 a0001c0001t0001g0178 a0001c0001t0001g0292 a0001c0023t0001g0115 a0002c0002t0002g0104 a0002c0002t0002g0120 a0002c0002t0002g0125 a0002c0002t0002g0156 a0002c0003t0001g0056 a0002c0003t0001g0078 a0002c0003t0001g0080 a0002c0003t0001g0081 a0002c0003t0001g0082 a0002c0003t0001g0083 a0002c0003t0001g0090 a0002c0003t0001g0091 a0002c0003t0001g0092 a0002c0003t0001g0093 a0002c0003t0001g0094 a0002c0003t0001g0095 a0002c0003t0001g0103 a0002c0003t0001g0121 a0002c0003t0001g0146 a0002c0003t0001g0147 a0002c0003t0001g0268 a0004c0005t0001g0286 a0008c0015t0001g0075 a0008c0015t0001g0100 a0015c0022t0001g0175	53	332	0.1596	21	c.128 others(38): Show c.128-4886_128-4885insTAATAATAATAATAATAATAA	TBC1D8	ENSG00000204634.13	transcript	ENST00000409318.2	protein_coding	1/19			chr2	TogoVar
TBC1D9B_chr5_179857071_179912897	179881946	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG03209.hp2 HG02630.hp2 HG03209.hp2	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0001 a0002c0006t0015 a0002c0006t0001 a0002c0006t0015	a0002c0006t0001g0146 a0002c0006t0015g0145 a0002c0006t0001g0146 a0002c0006t0015g0145	2	362	0.0055	21	c.125 others(40): Show c.1255-2158_1255-2157insAAAAAAAAAAAAAAAAAAAAA	TBC1D9B	ENSG00000197226.13	transcript	ENST00000355235.8	protein_coding	7/20			chr5	TogoVar
TBCD_chr17_82747065_82950914	82758384	G G	GAAAAAAA others(14): Show GAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG03471.hp1 NA19077.hp1 others(2): Show HG02055.hp2 HG03471.hp1 NA19077.hp1 NA19088.hp2 NA19240.hp2	a0001 a0004 a0001 a0004	a0001c0009 a0001c0044 a0004c0005 a0001c0009 a0001c0044 a0004c0005	a0001c0009t0014 a0001c0044t0014 a0004c0005t0001 a0001c0009t0014 a0001c0044t0014 a0004c0005t0001	a0001c0009t0014g0129 a0001c0044t0014g0113 a0004c0005t0001g0014 others(2): Show a0001c0009t0014g0129 a0001c0044t0014g0113 a0004c0005t0001g0014 a0004c0005t0001g0106 a0004c0005t0001g0109	5	318	0.0157	21	c.235 others(38): Show c.235+2188_235+2189insAAAAAAAAAAAAAAAAAAAAA	TBCD	ENSG00000141556.22	transcript	ENST00000355528.9	protein_coding	2/38		INFO_REALIGN_3_PRIME	chr17	TogoVar

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