Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
TCHH_chr1_152101317_152120444	152112073	G G	GCTGCTCG others(14): Show GCTGCTCGCGCCTCTCCTCCTC	conservative_inframe_insertion conservative_inframe_insertion	MODERATE	HG00423.hp1 HG03017.hp1 HG03831.hp1 others(7): Show HG00423.hp1 HG03017.hp1 HG03831.hp1 NA18953.hp2 NA18994.hp1 NA19005.hp2 NA19011.hp2 NA19066.hp2 NA19068.hp1 NA19077.hp2	a0009 a0022 a0009 a0022	a0009c0012 a0009c0062 a0022c0019 a0009c0012 a0009c0062 a0022c0019	a0009c0012t0001 a0009c0062t0001 a0022c0019t0001 a0009c0012t0001 a0009c0062t0001 a0022c0019t0001	a0009c0012t0001g0010 a0009c0062t0001g0081 a0022c0019t0001g0021 a0009c0012t0001g0010 a0009c0062t0001g0081 a0022c0019t0001g0021	10	303	0.0330	21	c.114 others(30): Show c.1143_1144insGAGGAGGAGAGGCGCGAGCAG	p.Gln others(34): Show p.Gln381_Gln382insGluGluGluArgArgGluGln	TCHH	ENSG00000159450.13	transcript	ENST00000614923.2	protein_coding	3/3	1228/6985	1143/5832	381/1943			chr1	TogoVar
TCL1A_chr14_95704947_95719125	95708502	A A	AAAAAAAA others(14): Show AAAAAAAAAAATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0028 a0001c0001t0001g0028	1	250	0.0040	21	c.23 others(32): Show c.2385_*2386insATATATATATATTTTTTTTTT		TCL1A	ENSG00000100721.11	transcript	ENST00000402399.6	protein_coding					1444		chr14	TogoVar
TCN2_chr22_30602174_30632271	30623769	T T	TATGAAAT others(14): Show TATGAAATATATATATATACAG	intron_variant intron_variant	MODIFIER	HG02683.hp1 HG02683.hp1	a0006 a0006	a0006c0006 a0006c0006	a0006c0006t0001 a0006c0006t0001	a0006c0006t0001g0195 a0006c0006t0001g0195	1	462	0.0022	21	c.122 others(38): Show c.1222+687_1222+688insTGAAATATATATATATACAGA		TCN2	ENSG00000185339.10	transcript	ENST00000215838.8	protein_coding	8/8					INFO_REALIGN_3_PRIME	chr22	TogoVar
TCP11L1_chr11_33034572_33078550	33038139	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19075.hp1 NA19075.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0195 a0001c0003t0001g0195	1	157	0.0064	21	c.-16 others(32): Show c.-1678_-1677insTTTTTTTTTTTTTTTTTTTTT		TCP11L1	ENSG00000176148.16	transcript	ENST00000334274.9	protein_coding					1432		chr11	TogoVar
TCP11X1_chrX_102210301_102231795	102220670	C C	CATATTAT others(14): Show CATATTATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA20905.hp1 NA20905.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0022 a0002c0002t0001g0022	1	37	0.0270	21	c.231 others(36): Show c.231-867_231-866insTATATATATATATATATATAT		TCP11X1	ENSG00000268235.9	transcript	ENST00000622971.4	protein_coding	3/9					INFO_REALIGN_3_PRIME	chrX	TogoVar
TCP11X2_chrX_102455315_102476812	102466422	A A	AAATATAT others(14): Show AAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG04115.hp2 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0034 a0001c0001t0001g0034	1	7	0.1429	21	c.231 others(36): Show c.231-854_231-853insATATATATATATATATATATT		TCP11X2	ENSG00000215029.12	transcript	ENST00000642911.3	protein_coding	3/9						chrX	TogoVar
TCTN3_chr10_95658401_95698927	95672161	T T	TGTGTGTG others(14): Show TGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	NA18967.hp2 NA18967.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	398	0.0025	21	c.159 others(40): Show c.1591-7862_1591-7861insCACACACACACACACACACAC		TCTN3	ENSG00000119977.22	transcript	ENST00000371217.10	protein_coding	13/13						chr10	TogoVar
TCTN3_chr10_95658401_95698927	95677473	A A	ACAGTTTT others(14): Show ACAGTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0006 a0002c0003t0001g0006	1	213	0.0047	21	c.159 others(40): Show c.1590+2998_1590+2999insAAAAAAAAAAAAAAAAAACTG		TCTN3	ENSG00000119977.22	transcript	ENST00000371217.10	protein_coding	13/13						chr10	TogoVar
TDGF1_chr3_46572788_46587457	46573545	A A	ATATATAT others(14): Show ATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0020 a0002c0002t0020	a0002c0002t0020g0002 a0002c0002t0020g0002	1	314	0.0032	21	c.-44 others(32): Show c.-4425_-4424insTATATATATATATATATATAT		TDGF1	ENSG00000241186.10	transcript	ENST00000296145.6	protein_coding					4242		chr3	TogoVar
TDGF1_chr3_46572788_46587457	46573547	A A	AAAAATAT others(14): Show AAAAATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01516.hp1 HG01516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	164	0.0061	21	c.-44 others(32): Show c.-4423_-4422insAAAATATATATATATATATAT		TDGF1	ENSG00000241186.10	transcript	ENST00000296145.6	protein_coding					4240		chr3	TogoVar
TDP1_chr14_89950927_90049764	90020584	C C	CTCCCTCC others(14): Show CTCCCTCCCTCCCTTCCTTCCT	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02300.hp2 HG02109.hp1 HG02300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0110 a0001c0001t0001g0111	2	238	0.0084	21	c.164 others(40): Show c.1644+1179_1644+1180insTCCTTCCTTCCCTCCCTCCCT		TDP1	ENSG00000042088.14	transcript	ENST00000335725.9	protein_coding	15/16					INFO_REALIGN_3_PRIME	chr14	TogoVar
TDP2_chr6_24644979_24671899	24648659	G G	GAAAAAAA others(14): Show GAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0087 a0001c0001t0001g0087	1	306	0.0033	21	c.21 others(32): Show c.2128_*2129insTTTTTTTTTTTTTTTTTTTTT		TDP2	ENSG00000111802.14	transcript	ENST00000378198.9	protein_coding					1319		chr6	TogoVar
TDRD12_chr19_32714767_32834580	32739518	C C	CTGCATCT others(14): Show CTGCATCTCCTGGGGCTCTCTT	intron_variant intron_variant	MODIFIER	HG03831.hp2 HG03831.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0005 a0004c0004t0005	a0004c0004t0005g0269 a0004c0004t0005g0269	1	378	0.0026	21	c.320 others(36): Show c.320+560_320+580dupGGCTCTCTTTGCATCTCCTGG		TDRD12	ENSG00000173809.18	transcript	ENST00000639142.2	protein_coding	3/32					INFO_REALIGN_3_PRIME	chr19	TogoVar
TDRD12_chr19_32714767_32834580	32739836	A A	ACTCTCTG others(14): Show ACTCTCTGCATCTCCTGGTGTG	intron_variant intron_variant	MODIFIER	NA18951.hp1 NA18951.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0034 a0002c0003t0034	a0002c0003t0034g0210 a0002c0003t0034g0210	1	378	0.0026	21	c.320 others(36): Show c.320+864_320+884dupTGCTCTCTGCATCTCCTGGTG		TDRD12	ENSG00000173809.18	transcript	ENST00000639142.2	protein_coding	3/32					INFO_REALIGN_3_PRIME	chr19	TogoVar
TDRD12_chr19_32714767_32834580	32739860	C C	CTCTGCAT others(14): Show CTCTGCATCTCCTGGTGCGCTG	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00408.hp2 HG00423.hp2 others(46): Show HG00323.hp2 HG00408.hp2 HG00423.hp2 HG00438.hp1 HG00609.hp2 HG01261.hp2 HG01361.hp2 HG02027.hp1 HG02071.hp2 HG02074.hp2 HG02135.hp2 HG02559.hp2 HG02630.hp1 HG02809.hp1 HG02970.hp2 HG03130.hp2 HG03704.hp2 NA18612.hp1 NA18747.hp2 NA18941.hp2 NA18946.hp1 NA18947.hp2 NA18950.hp1 NA18954.hp1 NA18956.hp1 NA18960.hp2 NA18962.hp2 NA18970.hp2 NA18977.hp2 NA18978.hp2 NA18979.hp1 NA18986.hp2 NA18990.hp1 NA18995.hp2 NA18998.hp2 NA19002.hp2 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19060.hp2 NA19062.hp1 NA19064.hp1 NA19066.hp2 NA19068.hp1 NA19077.hp2 NA19083.hp2 NA19084.hp1 NA20905.hp1 NA21309.hp2	a0001 a0007 a0012 others(1): Show a0001 a0007 a0012 a0025	a0001c0001 a0001c0017 a0001c0019 others(3): Show a0001c0001 a0001c0017 a0001c0019 a0007c0011 a0012c0015 a0025c0029	a0001c0001t0004 a0001c0001t0010 a0001c0001t0012 others(9): Show a0001c0001t0004 a0001c0001t0010 a0001c0001t0012 a0001c0001t0020 a0001c0001t0029 a0001c0001t0030 a0001c0001t0032 a0001c0017t0021 a0001c0019t0004 a0007c0011t0004 a0012c0015t0017 a0025c0029t0004	a0001c0001t0004g0101 a0001c0001t0004g0102 a0001c0001t0004g0134 others(46): Show a0001c0001t0004g0101 a0001c0001t0004g0102 a0001c0001t0004g0134 a0001c0001t0004g0135 a0001c0001t0004g0139 a0001c0001t0004g0141 a0001c0001t0004g0143 a0001c0001t0004g0145 a0001c0001t0004g0147 a0001c0001t0004g0148 a0001c0001t0004g0149 a0001c0001t0004g0150 a0001c0001t0004g0152 a0001c0001t0004g0155 a0001c0001t0004g0157 a0001c0001t0004g0159 a0001c0001t0004g0160 a0001c0001t0004g0161 a0001c0001t0004g0164 a0001c0001t0004g0165 a0001c0001t0004g0167 a0001c0001t0004g0169 a0001c0001t0004g0170 a0001c0001t0004g0172 a0001c0001t0004g0175 a0001c0001t0004g0176 a0001c0001t0004g0177 a0001c0001t0010g0138 a0001c0001t0010g0146 a0001c0001t0010g0154 a0001c0001t0010g0162 a0001c0001t0010g0168 a0001c0001t0010g0171 a0001c0001t0010g0179 a0001c0001t0012g0132 a0001c0001t0020g0133 a0001c0001t0020g0156 a0001c0001t0029g0163 a0001c0001t0030g0166 a0001c0001t0032g0174 a0001c0017t0021g0136 a0001c0017t0021g0137 a0001c0019t0004g0144 a0007c0011t0004g0151 a0007c0011t0004g0153 a0007c0011t0004g0158 a0012c0015t0017g0142 a0012c0015t0017g0173 a0025c0029t0004g0140	49	378	0.1296	21	c.320 others(36): Show c.320+883_320+903dupTGCGCTGTCTGCATCTCCTGG		TDRD12	ENSG00000173809.18	transcript	ENST00000639142.2	protein_coding	3/32					INFO_REALIGN_3_PRIME	chr19	TogoVar
TDRD1_chr10_114174353_114237666	114236553	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0006 a0006	a0006c0016 a0006c0016	a0006c0016t0077 a0006c0016t0077	a0006c0016t0077g0230 a0006c0016t0077g0230	1	237	0.0042	21	c.84 others(32): Show c.8423_*8424insAAAAAAAAAAAAAAAAAAAAA		TDRD1	ENSG00000095627.10	transcript	ENST00000695399.1	protein_coding					3888		chr10	TogoVar
TDRD3_chr13_60392220_60578871	60435918	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA20905.hp2 NA20905.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0064 a0002c0002t0001g0064	1	237	0.0042	21	c.42- others(36): Show c.42-3757_42-3756insTTTTTTTTTTTTTTTTTTTTT		TDRD3	ENSG00000083544.16	transcript	ENST00000377881.8	protein_coding	1/13					INFO_REALIGN_3_PRIME	chr13	TogoVar
TDRD9_chr14_103923456_104057667	103956109	A A	ATATATAT others(14): Show ATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0366 a0001c0002t0002g0366	1	247	0.0040	21	c.322 others(36): Show c.322+339_322+340insTATATATATATATATATATAT		TDRD9	ENSG00000156414.20	transcript	ENST00000409874.9	protein_coding	2/35						chr14	TogoVar
TDRD9_chr14_103923456_104057667	103968795	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19000.hp1 NA19000.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0023 a0001c0003t0004g0023	1	10	0.1000	21	c.766 others(38): Show c.766-1737_766-1736insAAAAAAAAAAAAAAAAAAAAA		TDRD9	ENSG00000156414.20	transcript	ENST00000409874.9	protein_coding	5/35					INFO_REALIGN_3_PRIME	chr14	TogoVar
TEAD1_chr11_12669421_12949737	12821961	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02257.hp2 HG02280.hp1 others(1): Show HG02055.hp2 HG02257.hp2 HG02280.hp1 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0007 a0001c0001t0044 a0001c0002t0004 others(1): Show a0001c0001t0007 a0001c0001t0044 a0001c0002t0004 a0001c0002t0046	a0001c0001t0007g0058 a0001c0001t0044g0199 a0001c0002t0004g0113 others(1): Show a0001c0001t0007g0058 a0001c0001t0044g0199 a0001c0002t0004g0113 a0001c0002t0046g0198	4	14	0.2857	21	c.203 others(40): Show c.203-40269_203-40268insTTTTTTTTTTTTTTTTTTTTT		TEAD1	ENSG00000187079.20	transcript	ENST00000527636.7	protein_coding	3/12					WARNING_TRANSCRIPT_NO_START_CODON&INFO_REALIGN_3_PRIME	chr11	TogoVar
TEAD1_chr11_12669421_12949737	12837681	T T	TTTCTCCT others(14): Show TTTCTCCTTTCTCCCTTCTCCC	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG01517.hp2 HG02257.hp1 others(3): Show HG01516.hp1 HG01517.hp2 HG02257.hp1 HG02615.hp2 HG02818.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0123 a0001c0001t0001g0135 a0001c0001t0001g0137 others(3): Show a0001c0001t0001g0123 a0001c0001t0001g0135 a0001c0001t0001g0137 a0001c0001t0001g0178 a0001c0001t0001g0206 a0001c0002t0002g0136	6	150	0.0400	21	c.203 others(40): Show c.203-24563_203-24562insTTTCTCCCTTCTCCCTTCTCC		TEAD1	ENSG00000187079.20	transcript	ENST00000527636.7	protein_coding	3/12					WARNING_TRANSCRIPT_NO_START_CODON&INFO_REALIGN_3_PRIME	chr11	TogoVar
TEAD1_chr11_12669421_12949737	12908883	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0109 a0001c0001t0001g0109	1	133	0.0075	21	c.873 others(38): Show c.873+6783_873+6784insTTTTTTTTTTTTTTTTTTTTT		TEAD1	ENSG00000187079.20	transcript	ENST00000527636.7	protein_coding	10/12					WARNING_TRANSCRIPT_NO_START_CODON&INFO_REALIGN_3_PRIME	chr11	TogoVar
TEAD2_chr19_49335595_49367416	49337687	G G	GGAAAAAG others(14): Show GGAAAAAGAGAGAACAAGAGAA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18972.hp1 NA18972.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	354	0.0028	21	c.36 others(32): Show c.3616_*3636dupTTCTCTTGTTCTCTCTTTTTC		TEAD2	ENSG00000074219.14	transcript	ENST00000593945.6	protein_coding					2907		chr19	TogoVar
TECRL_chr4_64272702_64414450	64334030	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01358.hp2 HG01361.hp2 others(4): Show HG00438.hp1 HG01358.hp2 HG01361.hp2 NA18965.hp2 NA19001.hp1 NA19003.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0016 a0001c0001t0002 a0001c0001t0003 a0001c0001t0016	a0001c0001t0002g0167 a0001c0001t0002g0187 a0001c0001t0002g0240 others(4): Show a0001c0001t0002g0167 a0001c0001t0002g0187 a0001c0001t0002g0240 a0001c0001t0002g0244 a0001c0001t0002g0245 a0001c0001t0003g0184 a0001c0001t0016g0212	7	41	0.1707	21	c.287 others(38): Show c.287-5475_287-5474insTTTTTTTTTTTTTTTTTTTTT		TECRL	ENSG00000205678.8	transcript	ENST00000381210.8	protein_coding	2/11						chr4	TogoVar
TECRL_chr4_64272702_64414450	64345907	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19005.hp2 NA19005.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	12	0.0833	21	c.287 others(40): Show c.287-17372_287-17352dupTTTTTTTTTTTTTTTTTTTTT		TECRL	ENSG00000205678.8	transcript	ENST00000381210.8	protein_coding	2/11						chr4	TogoVar
TECTA_chr11_121096243_121196490	121181450	A A	AATAATTA others(14): Show AATAATTATTATTATTATTATT	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0015 a0015	a0015c0024 a0015c0024	a0015c0024t0002 a0015c0024t0002	a0015c0024t0002g0263 a0015c0024t0002g0263	1	198	0.0051	21	c.600 others(40): Show c.6000-6380_6000-6379insAATTATTATTATTATTATTAT		TECTA	ENSG00000109927.11	transcript	ENST00000392793.6	protein_coding	20/23					INFO_REALIGN_3_PRIME	chr11	TogoVar
TEKT5_chr16_10622501_10699930	10697881	A A	AAATATCT others(14): Show AAATATCTATATTTATATTTAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0191 a0001c0003t0001g0191	1	386	0.0026	21	c.-30 others(32): Show c.-3009_-3008insATAAATATAAATATAGATATT		TEKT5	ENSG00000153060.8	transcript	ENST00000283025.7	protein_coding					2952		chr16	TogoVar
TELO2_chr16_1488360_1515454	1507827	T T	TGACACAC others(14): Show TGACACACTCTATCAGATTGGG	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0005 a0002c0005t0005	a0002c0005t0005g0120 a0002c0005t0005g0120	1	444	0.0023	21	c.240 others(38): Show c.2407+112_2407+113insACACACTCTATCAGATTGGGG		TELO2	ENSG00000100726.15	transcript	ENST00000262319.11	protein_coding	20/20					INFO_REALIGN_3_PRIME	chr16	TogoVar
TENM2_chr5_166974029_168269157	166979194	C C	CCAGCAGC others(14): Show CCAGCAGCAGCAGCAGCAGCAG	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02895.hp1 HG02897.hp2 HG02895.hp1 HG02897.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0005 a0001c0006t0005	a0001c0006t0005g0026 a0001c0006t0005g0028 a0001c0006t0005g0026 a0001c0006t0005g0028	2	10	0.2000	21	c.-49 others(30): Show c.-496_-476dupAGCAGCAGCAGCAGCAGCAGC		TENM2	ENSG00000145934.17	transcript	ENST00000518659.6	protein_coding	1/31				305600	INFO_REALIGN_3_PRIME	chr5	TogoVar
TENM2_chr5_166974029_168269157	167517609	T T	TGAGCTGA others(14): Show TGAGCTGAGAAGCTCAGCTGAG	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG02897.hp1	a0007 a0007	a0007c0036 a0007c0036	a0007c0036t0004 a0007c0036t0004	a0007c0036t0004g0017 a0007c0036t0004g0017	1	54	0.0185	21	c.502 others(42): Show c.502+142136_502+142137insGAGCTGAGAAGCTCAGCTGAG		TENM2	ENSG00000145934.17	transcript	ENST00000518659.6	protein_coding	4/30						chr5	TogoVar
TENM2_chr5_166974029_168269157	167776593	G G	GAAAAAAA others(14): Show GAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0038 a0001c0038	a0001c0038t0007 a0001c0038t0007	a0001c0038t0007g0003 a0001c0038t0007g0003	1	8	0.1250	21	c.503 others(40): Show c.503-99380_503-99360dupAAAAAAAAAAAAAAAAAAAAA		TENM2	ENSG00000145934.17	transcript	ENST00000518659.6	protein_coding	4/30					INFO_REALIGN_3_PRIME	chr5	TogoVar
TENM2_chr5_166974029_168269157	167853289	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0013 a0001c0002t0013	a0001c0002t0013g0041 a0001c0002t0013g0041	1	10	0.1000	21	c.503 others(40): Show c.503-22694_503-22674dupAAAAAAAAAAAAAAAAAAAAA		TENM2	ENSG00000145934.17	transcript	ENST00000518659.6	protein_coding	4/30					INFO_REALIGN_3_PRIME	chr5	TogoVar
TENM3_chr4_182238402_182808024	182298984	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0002 a0001c0005t0002	a0001c0005t0002g0128 a0001c0005t0002g0128	1	50	0.0200	21	c.-75 others(40): Show c.-75-24950_-75-24930dupAAAAAAAAAAAAAAAAAAAAA		TENM3	ENSG00000218336.9	transcript	ENST00000511685.6	protein_coding	1/27					INFO_REALIGN_3_PRIME	chr4	TogoVar
TENM3_chr4_182238402_182808024	182426007	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03486.hp2 HG03098.hp1 HG03486.hp2	a0001 a0009 a0001 a0009	a0001c0001 a0009c0040 a0001c0001 a0009c0040	a0001c0001t0001 a0009c0040t0001 a0001c0001t0001 a0009c0040t0001	a0001c0001t0001g0112 a0009c0040t0001g0125 a0001c0001t0001g0112 a0009c0040t0001g0125	2	7	0.2857	21	c.511 others(40): Show c.511+79081_511+79101dupAAAAAAAAAAAAAAAAAAAAA		TENM3	ENSG00000218336.9	transcript	ENST00000511685.6	protein_coding	3/27					INFO_REALIGN_3_PRIME	chr4	TogoVar
TENM4_chr11_78647829_79446030	78904359	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0008 a0001c0012t0008	a0001c0012t0008g0012 a0001c0012t0008g0012	1	32	0.0313	21	c.494 others(36): Show c.494-837_494-836insTTTTTTTTTTTTTTTTTTTTT		TENM4	ENSG00000149256.16	transcript	ENST00000278550.12	protein_coding	6/33						chr11	TogoVar
TENM4_chr11_78647829_79446030	79138968	A A	AAAATATA others(14): Show AAAATATATATTATATTTATAT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0001 a0001	a0001c0038 a0001c0038	a0001c0038t0004 a0001c0038t0004	a0001c0038t0004g0003 a0001c0038t0004g0003	1	92	0.0109	21	c.-66 others(38): Show c.-66+9741_-66+9742insATATAAATATAATATATATTT		TENM4	ENSG00000149256.16	transcript	ENST00000278550.12	protein_coding	4/33						chr11	TogoVar
TENM4_chr11_78647829_79446030	79139777	A A	AATATATA others(14): Show AATATATATATTATATATATAT	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0005 a0001c0006t0005	a0001c0006t0005g0023 a0001c0006t0005g0023	1	67	0.0149	21	c.-66 others(38): Show c.-66+8932_-66+8933insATATATATATAATATATATAT		TENM4	ENSG00000149256.16	transcript	ENST00000278550.12	protein_coding	4/33						chr11	TogoVar
TENT2_chr5_79607441_79693246	79659553	A A	AAATGTAT others(14): Show AAATGTATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02071.hp2 HG02071.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0263 a0001c0001t0001g0263	1	217	0.0046	21	c.107 others(40): Show c.1071+2553_1071+2554insATGTATATATATATATATATA		TENT2	ENSG00000164329.15	transcript	ENST00000453514.6	protein_coding	11/14					INFO_REALIGN_3_PRIME	chr5	TogoVar
TEPP_chr16_57971544_57993116	57981383	A A	AATAATAA others(14): Show AATAATAATAATTATTATTATT	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00597.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0166 a0002c0002t0002g0166	1	444	0.0023	21	c.224 others(38): Show c.224-2896_224-2876dupAATAATAATTATTATTATTAT		TEPP	ENSG00000159648.13	transcript	ENST00000441824.4	protein_coding	2/7					INFO_REALIGN_3_PRIME	chr16	TogoVar
TEPP_chr16_57971544_57993116	57981389	A A	AATAATAA others(14): Show AATAATAATAATTATTATTATT	intron_variant intron_variant	MODIFIER	HG03669.hp1 HG04204.hp1 HG03669.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0059 a0001c0001t0001g0129 a0001c0001t0001g0059 a0001c0001t0001g0129	2	308	0.0065	21	c.224 others(38): Show c.224-2909_224-2908insAATAATTATTATTATTATAAT		TEPP	ENSG00000159648.13	transcript	ENST00000441824.4	protein_coding	2/7					INFO_REALIGN_3_PRIME	chr16	TogoVar
TEPP_chr16_57971544_57993116	57981389	A A	AATAATAA others(14): Show AATAATAATTATTATTATTATT	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01081.hp1 HG01168.hp2 others(8): Show HG00735.hp2 HG01081.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01257.hp1 HG01258.hp2 HG01261.hp1 HG02602.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0021 a0001c0001t0001g0045 a0001c0001t0001g0091 others(4): Show a0001c0001t0001g0021 a0001c0001t0001g0045 a0001c0001t0001g0091 a0001c0001t0001g0097 a0001c0001t0001g0104 a0001c0001t0001g0130 a0001c0001t0001g0136	11	317	0.0347	21	c.224 others(38): Show c.224-2909_224-2908insAATTATTATTATTATTATAAT		TEPP	ENSG00000159648.13	transcript	ENST00000441824.4	protein_coding	2/7					INFO_REALIGN_3_PRIME	chr16	TogoVar
TEPP_chr16_57971544_57993116	57981389	A A	AATAATTA others(14): Show AATAATTATTATTATTATTATT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00408.hp1 others(29): Show HG00099.hp2 HG00140.hp2 HG00408.hp1 HG00438.hp1 HG00639.hp1 HG00639.hp2 HG00733.hp1 HG00735.hp1 HG00741.hp1 HG01069.hp2 HG01074.hp1 HG01081.hp2 HG01243.hp1 HG01256.hp1 HG01361.hp1 HG01433.hp2 HG01515.hp1 HG02015.hp1 HG02129.hp1 HG02300.hp1 HG02683.hp2 HG03490.hp1 HG03492.hp2 HG03927.hp2 NA18747.hp2 NA18942.hp2 NA18944.hp1 NA18969.hp1 NA19002.hp2 NA19057.hp1 NA19088.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0012 a0001c0001t0001g0046 others(11): Show a0001c0001t0001g0007 a0001c0001t0001g0012 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0092 a0001c0001t0001g0098 a0001c0001t0001g0102 a0001c0001t0001g0106 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0131 a0001c0001t0001g0137 a0001c0001t0001g0138	32	338	0.0947	21	c.224 others(38): Show c.224-2897_224-2896insTATTATAATTATTATTATTAT		TEPP	ENSG00000159648.13	transcript	ENST00000441824.4	protein_coding	2/7					INFO_REALIGN_3_PRIME	chr16	TogoVar
TEPP_chr16_57971544_57993116	57981389	A A	AATTATTA others(14): Show AATTATTATTATTATTATTATT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00280.hp2 others(79): Show HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00597.hp2 HG00609.hp2 HG00733.hp2 HG00738.hp2 HG01109.hp2 HG01123.hp2 HG01167.hp2 HG01192.hp2 HG01257.hp2 HG01358.hp2 HG01361.hp2 HG01516.hp2 HG01517.hp1 HG01928.hp1 HG02027.hp1 HG02040.hp2 HG02080.hp2 HG02083.hp2 HG02132.hp2 HG02145.hp1 HG02148.hp2 HG02258.hp2 HG02602.hp2 HG02647.hp2 HG02683.hp1 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02818.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03239.hp2 HG03453.hp1 HG03471.hp2 HG03490.hp2 HG03654.hp1 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04115.hp1 HG04228.hp2 HG06807.hp1 NA18939.hp2 NA18941.hp2 NA18947.hp2 NA18948.hp1 NA18957.hp1 NA18959.hp1 NA18960.hp1 NA18962.hp1 NA18962.hp2 NA18963.hp2 NA18966.hp2 NA18970.hp2 NA18972.hp1 NA18981.hp1 NA18983.hp1 NA18986.hp2 NA19007.hp1 NA19012.hp2 NA19043.hp1 NA19055.hp2 NA19058.hp2 NA19063.hp1 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19240.hp1 NA20805.hp2 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0001c0003t0001 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0003t0001 a0001c0003t0004 a0002c0002t0002	a0001c0001t0001g0002 a0001c0001t0001g0013 a0001c0001t0001g0028 others(32): Show a0001c0001t0001g0002 a0001c0001t0001g0013 a0001c0001t0001g0028 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0033 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0095 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0103 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0123 a0001c0001t0001g0127 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0140 a0001c0001t0001g0142 a0001c0001t0001g0160 a0001c0001t0003g0019 a0001c0001t0003g0134 a0001c0003t0001g0002 a0001c0003t0004g0002 a0001c0003t0004g0031 a0002c0002t0002g0116	82	388	0.2113	21	c.224 others(38): Show c.224-2912_224-2911insTATTATTATTATTATTATTAT		TEPP	ENSG00000159648.13	transcript	ENST00000441824.4	protein_coding	2/7					INFO_REALIGN_3_PRIME	chr16	TogoVar
TEPP_chr16_57971544_57993116	57981392	A A	AATTATTA others(14): Show AATTATTATTATTATTATTATT	intron_variant intron_variant	MODIFIER	HG00408.hp2 NA19000.hp2 HG00408.hp2 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0093 a0001c0001t0001g0109 a0001c0001t0001g0093 a0001c0001t0001g0109	2	431	0.0046	21	c.224 others(38): Show c.224-2897_224-2896insTATTATTATTATTATTATTAT		TEPP	ENSG00000159648.13	transcript	ENST00000441824.4	protein_coding	2/7					INFO_REALIGN_3_PRIME	chr16	TogoVar
TEPP_chr16_57971544_57993116	57981431	T T	TATAATTA others(14): Show TATAATTATTATTATTATAATA	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0148 a0001c0006t0001g0148	1	131	0.0076	21	c.224 others(38): Show c.224-2866_224-2865insATTATTATTATAATAATAATT		TEPP	ENSG00000159648.13	transcript	ENST00000441824.4	protein_coding	2/7					INFO_REALIGN_3_PRIME	chr16	TogoVar
TEPP_chr16_57971544_57993116	57986584	C C	CATTATTA others(14): Show CATTATTATTATTATTATTATT	intron_variant intron_variant	MODIFIER	HG03017.hp1 HG03017.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0147 a0001c0001t0001g0147	1	345	0.0029	21	c.620 others(36): Show c.620+650_620+670dupATTATTATTATTATTATTATT		TEPP	ENSG00000159648.13	transcript	ENST00000441824.4	protein_coding	7/7					INFO_REALIGN_3_PRIME	chr16	TogoVar
TERT_chr5_1248167_1300068	1254798	G G	GGCAGAGG others(14): Show GGCAGAGGACGGTGACTGGGAA	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG02074.hp2 HG02083.hp2 others(1): Show HG00597.hp2 HG02074.hp2 HG02083.hp2 HG02129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0236 a0001c0002t0001g0074 a0001c0002t0001g0080 others(1): Show a0001c0001t0001g0236 a0001c0002t0001g0074 a0001c0002t0001g0080 a0001c0002t0001g0083	4	390	0.0103	21	c.315 others(38): Show c.3158-314_3158-294dupTTCCCAGTCACCGTCCTCTGC		TERT	ENSG00000164362.21	transcript	ENST00000310581.10	protein_coding	14/15						chr5	TogoVar
TESC_chr12_117033923_117104416	117039568	T T	TTCCATGA others(14): Show TTCCATGAGTATGATGTGGGAC	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01106.hp2 HG01884.hp2 others(27): Show HG00741.hp1 HG01106.hp2 HG01884.hp2 HG02109.hp1 HG02145.hp2 HG02257.hp1 HG02280.hp2 HG02559.hp2 HG02572.hp2 HG02622.hp2 HG02647.hp1 HG02717.hp1 HG02723.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02970.hp2 HG03041.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03471.hp1 HG03471.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 NA19030.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007	a0001c0001t0003g0021 a0001c0001t0003g0023 a0001c0001t0003g0025 others(27): Show a0001c0001t0003g0021 a0001c0001t0003g0023 a0001c0001t0003g0025 a0001c0001t0003g0030 a0001c0001t0003g0055 a0001c0001t0003g0056 a0001c0001t0003g0057 a0001c0001t0003g0058 a0001c0001t0003g0059 a0001c0001t0003g0068 a0001c0001t0003g0070 a0001c0001t0003g0080 a0001c0001t0003g0101 a0001c0001t0003g0164 a0001c0001t0003g0254 a0001c0001t0003g0255 a0001c0001t0003g0256 a0001c0001t0003g0257 a0001c0001t0003g0276 a0001c0001t0003g0277 a0001c0001t0003g0278 a0001c0001t0003g0279 a0001c0001t0003g0282 a0001c0001t0004g0034 a0001c0001t0004g0067 a0001c0001t0004g0095 a0001c0001t0004g0185 a0001c0001t0004g0212 a0001c0001t0004g0224 a0001c0001t0007g0290	30	309	0.0971	21	c.568 others(36): Show c.568-359_568-358insGTCCCACATCATACTCATGGA		TESC	ENSG00000088992.18	transcript	ENST00000335209.12	protein_coding	7/7						chr12	TogoVar
TESK2_chr1_45338883_45496163	45422756	T T	TTTGTTGT others(14): Show TTTGTTGTTGTTGTTGTTGTTG	intron_variant intron_variant	MODIFIER	HG03834.hp2 NA19067.hp1 HG03834.hp2 NA19067.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0005 a0001c0001t0001 a0001c0003t0005	a0001c0001t0001g0192 a0001c0003t0005g0157 a0001c0001t0001g0192 a0001c0003t0005g0157	2	272	0.0074	21	c.223 others(36): Show c.223-911_223-910insCAACAACAACAACAACAACAA		TESK2	ENSG00000070759.17	transcript	ENST00000372086.4	protein_coding	2/10						chr1	TogoVar
TESK2_chr1_45338883_45496163	45422759	T T	TTTGTTGT others(14): Show TTTGTTGTTGTTGTTGTTGTTG	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG01167.hp1 HG01169.hp2 others(18): Show HG00597.hp1 HG01167.hp1 HG01169.hp2 HG01175.hp1 HG01358.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01981.hp2 HG02040.hp2 HG02071.hp1 HG02258.hp2 HG02280.hp1 HG02818.hp2 HG03669.hp2 HG04199.hp1 NA18962.hp2 NA18966.hp1 NA18977.hp2 NA18978.hp1 NA19005.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0004 a0004c0011 a0001c0001 a0002c0004 a0004c0011	a0001c0001t0003 a0002c0004t0003 a0004c0011t0003 a0001c0001t0003 a0002c0004t0003 a0004c0011t0003	a0001c0001t0003g0102 a0001c0001t0003g0104 a0001c0001t0003g0105 others(18): Show a0001c0001t0003g0102 a0001c0001t0003g0104 a0001c0001t0003g0105 a0001c0001t0003g0106 a0001c0001t0003g0107 a0001c0001t0003g0114 a0001c0001t0003g0115 a0001c0001t0003g0116 a0001c0001t0003g0117 a0001c0001t0003g0118 a0001c0001t0003g0120 a0001c0001t0003g0121 a0001c0001t0003g0128 a0001c0001t0003g0129 a0001c0001t0003g0134 a0001c0001t0003g0136 a0001c0001t0003g0148 a0002c0004t0003g0108 a0002c0004t0003g0109 a0002c0004t0003g0122 a0004c0011t0003g0113	21	26	0.8077	21	c.223 others(36): Show c.223-914_223-913insCAACAACAACAACAACAACAA		TESK2	ENSG00000070759.17	transcript	ENST00000372086.4	protein_coding	2/10						chr1	TogoVar

Search by Variant

Search

Search Results