Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TNFRSF1B_chr1_12161991_12214220	12183702	A A	ATCTAGCT others(14): Show ATCTAGCTAGCTATCTAGCTAT	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0037 a0002c0002t0002g0037	1	360	0.0028	21	c.79- others(36): Show c.79-5090_79-5089insGCTAGCTATCTAGCTATTCTA	TNFRSF1B	ENSG00000028137.19	transcript	ENST00000376259.7	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr1	TogoVar
TNFRSF6B_chr20_63691652_63703684	63693600	A A	ACCACCTC others(14): Show ACCACCTCCACCACCACCACCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01361.hp1 HG01361.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	28	0.0357	21	c.-31 others(32): Show c.-3168_-3167insCCACCTCCACCACCACCACCT	TNFRSF6B	ENSG00000243509.6	transcript	ENST00000369996.3	protein_coding		3051		chr20	TogoVar
TNFRSF9_chr1_7910871_7945839	7942206	T T	TAGAGGAG others(14): Show TAGAGGAGGAGGAGGAGGAGGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02896.hp2 HG02897.hp2 HG02896.hp2 HG02897.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0024 a0001c0001t0011g0024	2	52	0.0385	21	c.-15 others(32): Show c.-1508_-1507insTCCTCCTCCTCCTCCTCCTCT	TNFRSF9	ENSG00000049249.10	transcript	ENST00000377507.8	protein_coding		1368		chr1	TogoVar
TNFSF12_chr17_7544058_7562881	7548137	G G	GTCCCTTC others(14): Show GTCCCTTCCTTCCTTCCTTCCT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0121 a0001c0001t0002g0121	1	73	0.0137	21	c.-10 others(32): Show c.-1017_-1016insTCCCTTCCTTCCTTCCTTCCT	TNFSF12	ENSG00000239697.12	transcript	ENST00000293825.11	protein_coding		920		chr17	TogoVar
TNFSF4_chr1_173178731_173212331	173202070	T T	TATATATA others(14): Show TATATATATATATATACACACA	intron_variant intron_variant	MODIFIER	HG02080.hp2 NA18612.hp1 NA18950.hp1 others(5): Show HG02080.hp2 NA18612.hp1 NA18950.hp1 NA18967.hp1 NA18974.hp1 NA18987.hp2 NA19009.hp1 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0006 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0006 a0001c0001t0002g0054 a0001c0001t0002g0055	8	257	0.0311	21	c.153 others(38): Show c.153+4953_153+4954insTGTGTGTATATATATATATAT	TNFSF4	ENSG00000117586.11	transcript	ENST00000281834.4	protein_coding	1/2			chr1	TogoVar
TNFSF8_chr9_114896145_114935591	114923525	T T	TCTTTCTT others(14): Show TCTTTCTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0122 a0001c0001t0001g0122	1	401	0.0025	21	c.196 others(38): Show c.196-5388_196-5387insGAAAGAAAGAAAGAAAGAAAG	TNFSF8	ENSG00000106952.8	transcript	ENST00000223795.3	protein_coding	1/3			chr9	TogoVar
TNFSF9_chr19_6526026_6540924	6540203	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18940.hp1 NA19011.hp1 NA18940.hp1 NA19011.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0083 a0001c0001t0001g0001 a0001c0001t0001g0083	2	139	0.0144	21	c.51 others(32): Show c.5137_*5138insTTTTTTTTTTTTTTTTTTTTT	TNFSF9	ENSG00000125657.5	transcript	ENST00000245817.5	protein_coding		4280		chr19	TogoVar
TNIK_chr3_171053414_171465405	171105519	T T	TACTCAAG others(14): Show TACTCAAGAGATCAGGATAGTC	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02109.hp2 HG02486.hp1 others(7): Show HG02055.hp1 HG02109.hp2 HG02486.hp1 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02965.hp2 HG03130.hp2 HG03139.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 others(1): Show a0001c0001 a0001c0002 a0001c0006 a0001c0018	a0001c0001t0005 a0001c0002t0001 a0001c0002t0002 others(3): Show a0001c0001t0005 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0006t0006 a0001c0018t0005	a0001c0001t0005g0007 a0001c0001t0005g0016 a0001c0001t0005g0031 others(7): Show a0001c0001t0005g0007 a0001c0001t0005g0016 a0001c0001t0005g0031 a0001c0001t0005g0072 a0001c0002t0001g0008 a0001c0002t0002g0003 a0001c0002t0002g0015 a0001c0002t0003g0094 a0001c0006t0006g0083 a0001c0018t0005g0010	10	101	0.0990	21	c.240 others(40): Show c.2406+1643_2406+1663dupGACTATCCTGATCTCTTGAGT	TNIK	ENSG00000154310.17	transcript	ENST00000436636.7	protein_coding	21/32			chr3	TogoVar
TNIK_chr3_171053414_171465405	171105519	T T	TACTCAAG others(14): Show TACTCAAGATATCAGGATAGTC	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0001 a0001c0006t0001g0001	1	92	0.0109	21	c.240 others(40): Show c.2406+1663_2406+1664insGACTATCCTGATATCTTGAGT	TNIK	ENSG00000154310.17	transcript	ENST00000436636.7	protein_coding	21/32			chr3	TogoVar
TNKS_chr8_9550912_9787346	9671848	G G	GCCTCTCA others(14): Show GCCTCTCAAAATATTAAGTGGA	intron_variant intron_variant	MODIFIER	HG03927.hp1 HG03927.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0021 a0001c0003t0021	a0001c0003t0021g0078 a0001c0003t0021g0078	1	270	0.0037	21	c.995 others(38): Show c.995-8102_995-8082dupCCTCTCAAAATATTAAGTGGA	TNKS	ENSG00000173273.17	transcript	ENST00000310430.11	protein_coding	3/26		INFO_REALIGN_3_PRIME	chr8	TogoVar
TNKS_chr8_9550912_9787346	9717068	T T	TATATATA others(14): Show TATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03834.hp1 HG03834.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0195 a0001c0001t0001g0195	1	269	0.0037	21	c.175 others(40): Show c.1750-3306_1750-3305insATATATATATATATATATATA	TNKS	ENSG00000173273.17	transcript	ENST00000310430.11	protein_coding	11/26			chr8	TogoVar
TNKS_chr8_9550912_9787346	9717102	T T	TATATATA others(14): Show TATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG01515.hp1 HG01515.hp2 HG01169.hp1 HG01515.hp1 HG01515.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0133 a0001c0001t0002g0161 a0001c0001t0002g0224 a0001c0001t0001g0133 a0001c0001t0002g0161 a0001c0001t0002g0224	3	268	0.0112	21	c.175 others(40): Show c.1750-3272_1750-3271insATATATATATATATATATATA	TNKS	ENSG00000173273.17	transcript	ENST00000310430.11	protein_coding	11/26			chr8	TogoVar
TNKS_chr8_9550912_9787346	9746881	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0015 a0001c0002t0015	a0001c0002t0015g0121 a0001c0002t0015g0121	1	85	0.0118	21	c.264 others(40): Show c.2644-1124_2644-1123insTTTTTTTTTTTTTTTTTTTTT	TNKS	ENSG00000173273.17	transcript	ENST00000310430.11	protein_coding	17/26		INFO_REALIGN_3_PRIME	chr8	TogoVar
TNNI3K_chr1_74230387_74549428	74378629	T T	TATATATA others(14): Show TATATATATATATATATATAAA	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0009 a0009	a0009c0011 a0009c0011	a0009c0011t0001 a0009c0011t0001	a0009c0011t0001g0174 a0009c0011t0001g0174	1	185	0.0054	21	c.177 others(40): Show c.1772+8249_1772+8250insATATATAAAATATATATATAT	TNNI3K	ENSG00000116783.15	transcript	ENST00000326637.8	protein_coding	17/24		INFO_REALIGN_3_PRIME	chr1	TogoVar
TNNI3_chr19_55146767_55162732	55158891	A A	AATGGAAT others(14): Show AATGGAATTTGAAAGCTCAGAC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19003.hp2 NA19003.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	386	0.0026	21	c.-13 others(32): Show c.-1303_-1302insGTCTGAGCTTTCAAATTCCAT	TNNI3	ENSG00000129991.13	transcript	ENST00000344887.10	protein_coding		1160		chr19	TogoVar
TNNT1_chr19_55127698_55154206	55134694	G G	GGGAGGGG others(14): Show GGGAGGGGAGGGGAGAGGAGAA	intron_variant intron_variant	MODIFIER	NA20752.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0239 a0001c0001t0001g0239	1	297	0.0034	21	c.612 others(36): Show c.612-491_612-490insTTCTCCTCTCCCCTCCCCTCC	TNNT1	ENSG00000105048.18	transcript	ENST00000588981.6	protein_coding	11/13			chr19	TogoVar
TNNT1_chr19_55127698_55154206	55134701	A A	AGGGGAGA others(14): Show AGGGGAGAGGAGAAGAGGGGAG	intron_variant intron_variant	MODIFIER	HG02129.hp2 HG02129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0190 a0001c0001t0001g0190	1	317	0.0032	21	c.612 others(36): Show c.612-518_612-498dupCTCCCCTCTTCTCCTCTCCCC	TNNT1	ENSG00000105048.18	transcript	ENST00000588981.6	protein_coding	11/13			chr19	TogoVar
TNNT1_chr19_55127698_55154206	55134736	A A	AGGGGAGG others(14): Show AGGGGAGGGGAGAGGAGAAGAG	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01175.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0192 a0001c0001t0001g0192	1	318	0.0031	21	c.612 others(36): Show c.612-553_612-533dupCTCTTCTCCTCTCCCCTCCCC	TNNT1	ENSG00000105048.18	transcript	ENST00000588981.6	protein_coding	11/13			chr19	TogoVar
TNN_chr1_175062833_175153075	175073924	A A	AGCTCGGG others(14): Show AGCTCGGGCCCTGAACTGCCCT	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02257.hp2 HG02486.hp2 others(8): Show HG02055.hp2 HG02257.hp2 HG02486.hp2 HG02630.hp1 HG02922.hp2 HG03471.hp1 HG03516.hp2 HG06807.hp1 NA18906.hp1 NA19030.hp1 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0016 a0002c0009 a0001c0016 a0002c0009	a0001c0016t0001 a0002c0009t0001 a0002c0009t0013 a0001c0016t0001 a0002c0009t0001 a0002c0009t0013	a0001c0016t0001g0040 a0002c0009t0001g0036 a0002c0009t0001g0037 others(8): Show a0001c0016t0001g0040 a0002c0009t0001g0036 a0002c0009t0001g0037 a0002c0009t0001g0038 a0002c0009t0001g0039 a0002c0009t0001g0041 a0002c0009t0001g0042 a0002c0009t0001g0043 a0002c0009t0001g0047 a0002c0009t0001g0049 a0002c0009t0013g0048	11	372	0.0296	21	c.-35 others(38): Show c.-35-3459_-35-3439dupGCTCGGGCCCTGAACTGCCCT	TNN	ENSG00000120332.17	transcript	ENST00000239462.9	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr1	TogoVar
TNN_chr1_175062833_175153075	175109072	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0016 a0002c0005t0016	a0002c0005t0016g0030 a0002c0005t0016g0030	1	124	0.0081	21	c.212 others(40): Show c.2120-7860_2120-7840dupTTTTTTTTTTTTTTTTTTTTT	TNN	ENSG00000120332.17	transcript	ENST00000239462.9	protein_coding	9/18		INFO_REALIGN_3_PRIME	chr1	TogoVar
TNN_chr1_175062833_175153075	175112598	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG04204.hp2 NA18522.hp1 HG04204.hp2 NA18522.hp1	a0001 a0013 a0001 a0013	a0001c0001 a0013c0014 a0001c0001 a0013c0014	a0001c0001t0001 a0013c0014t0001 a0001c0001t0001 a0013c0014t0001	a0001c0001t0001g0343 a0013c0014t0001g0088 a0001c0001t0001g0343 a0013c0014t0001g0088	2	6	0.3333	21	c.212 others(40): Show c.2120-4324_2120-4304dupTTTTTTTTTTTTTTTTTTTTT	TNN	ENSG00000120332.17	transcript	ENST00000239462.9	protein_coding	9/18		INFO_REALIGN_3_PRIME	chr1	TogoVar
TNRC18_chr7_5301811_5428834	5389461	G G	GTTTTTTT others(14): Show GTTTTTTTGTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02895.hp2 HG02451.hp2 HG02895.hp2	a0003 a0070 a0003 a0070	a0003c0156 a0070c0158 a0003c0156 a0070c0158	a0003c0156t0022 a0070c0158t0011 a0003c0156t0022 a0070c0158t0011	a0003c0156t0022g0086 a0070c0158t0011g0079 a0003c0156t0022g0086 a0070c0158t0011g0079	2	242	0.0083	21	c.488 others(36): Show c.488-126_488-125insAAAAAAAAAAAAACAAAAAAA	TNRC18	ENSG00000182095.15	transcript	ENST00000430969.6	protein_coding	4/29			chr7	TogoVar
TNRC18_chr7_5301811_5428834	5389461	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0077 a0077	a0077c0191 a0077c0191	a0077c0191t0003 a0077c0191t0003	a0077c0191t0003g0305 a0077c0191t0003g0305	1	241	0.0041	21	c.488 others(36): Show c.488-126_488-125insAAAAAAAAAAAAAAAAAAAAA	TNRC18	ENSG00000182095.15	transcript	ENST00000430969.6	protein_coding	4/29			chr7	TogoVar
TNRC6A_chr16_24724651_24831218	24729684	T T	TCGGCGGC others(14): Show TCGGCGGCGGCGGCGGTGTCGG	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18948.hp2 NA18948.hp2	a0001 a0001	a0001c0018 a0001c0018	a0001c0018t0096 a0001c0018t0096	a0001c0018t0096g0100 a0001c0018t0096g0100	1	191	0.0052	21	c.-14 others(30): Show c.-143_-142insTGTCGGCGGCGGCGGCGGCGG	TNRC6A	ENSG00000090905.19	transcript	ENST00000395799.8	protein_coding	1/25	142	INFO_REALIGN_3_PRIME	chr16	TogoVar
TNRC6A_chr16_24724651_24831218	24729684	T T	TCGGTGTC others(14): Show TCGGTGTCGGCGGCGGCGGCGG	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00280.hp2 HG00280.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0105 a0001c0009t0105	a0001c0009t0105g0167 a0001c0009t0105g0167	1	191	0.0052	21	c.-15 others(30): Show c.-155_-154insTGTCGGCGGCGGCGGCGGCGG	TNRC6A	ENSG00000090905.19	transcript	ENST00000395799.8	protein_coding	1/25	154	INFO_REALIGN_3_PRIME	chr16	TogoVar
TNRC6B_chr22_40172925_40340808	40258071	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02074.hp2 NA18973.hp2 HG02074.hp2 NA18973.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0063 a0001c0001t0010 a0001c0001t0063	a0001c0001t0010g0308 a0001c0001t0063g0276 a0001c0001t0010g0308 a0001c0001t0063g0276	2	83	0.0241	21	c.116 others(38): Show c.116-3751_116-3731dupTTTTTTTTTTTTTTTTTTTTT	TNRC6B	ENSG00000100354.21	transcript	ENST00000454349.7	protein_coding	3/22		INFO_REALIGN_3_PRIME	chr22	TogoVar
TNRC6C_chr17_77953703_78113822	77985601	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0012 a0001c0002t0012	a0001c0002t0012g0232 a0001c0002t0012g0232	1	232	0.0043	21	c.-37 others(40): Show c.-37-18554_-37-18553insAAAAAAAAAAAAAAAAAAAAA	TNRC6C	ENSG00000078687.18	transcript	ENST00000696270.1	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr17	TogoVar
TNR_chr1_175310194_175748595	175650927	C C	CCTCATTA others(14): Show CCTCATTACTACTCCTCCCCAT	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01071.hp2 HG01175.hp1 others(19): Show HG01070.hp2 HG01071.hp2 HG01175.hp1 HG01243.hp2 HG01891.hp2 HG02071.hp1 HG02109.hp2 HG02165.hp1 HG02559.hp1 HG02615.hp1 HG02630.hp2 HG02735.hp1 HG02922.hp1 HG02976.hp2 HG03195.hp2 HG03453.hp1 HG03688.hp2 NA18906.hp2 NA18949.hp1 NA18953.hp2 NA19007.hp2 NA20300.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0009	a0001c0002 a0001c0003 a0001c0009 others(9): Show a0001c0002 a0001c0003 a0001c0009 a0001c0042 a0002c0004 a0002c0008 a0002c0027 a0003c0001 a0004c0022 a0005c0011 a0005c0035 a0009c0024	a0001c0002t0001 a0001c0003t0004 a0001c0009t0017 others(12): Show a0001c0002t0001 a0001c0003t0004 a0001c0009t0017 a0001c0042t0001 a0002c0004t0003 a0002c0008t0006 a0002c0008t0019 a0002c0027t0050 a0003c0001t0005 a0003c0001t0016 a0003c0001t0047 a0004c0022t0013 a0005c0011t0015 a0005c0035t0053 a0009c0024t0003	a0001c0002t0001g0117 a0001c0003t0004g0068 a0001c0009t0017g0050 others(19): Show a0001c0002t0001g0117 a0001c0003t0004g0068 a0001c0009t0017g0050 a0001c0042t0001g0122 a0002c0004t0003g0012 a0002c0004t0003g0013 a0002c0004t0003g0014 a0002c0004t0003g0016 a0002c0004t0003g0017 a0002c0008t0006g0062 a0002c0008t0019g0096 a0002c0027t0050g0105 a0003c0001t0005g0057 a0003c0001t0005g0120 a0003c0001t0005g0128 a0003c0001t0016g0027 a0003c0001t0016g0053 a0003c0001t0047g0079 a0004c0022t0013g0041 a0005c0011t0015g0056 a0005c0035t0053g0070 a0009c0024t0003g0018	22	101	0.2178	21	c.-16 others(42): Show c.-165+92298_-165+92299insATGGGGAGGAGTAGTAATGAG	TNR	ENSG00000116147.18	transcript	ENST00000367674.7	protein_coding	1/22			chr1	TogoVar
TNS3_chr7_47270154_47587111	47361206	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01071.hp1 HG01081.hp2 others(6): Show HG00642.hp2 HG01071.hp1 HG01081.hp2 HG01106.hp1 HG01168.hp2 HG01433.hp1 HG01981.hp1 NA18995.hp1 NA21309.hp2	a0001 a0003 a0008 a0001 a0003 a0008	a0001c0002 a0001c0004 a0001c0005 others(3): Show a0001c0002 a0001c0004 a0001c0005 a0003c0011 a0008c0047 a0008c0048	a0001c0002t0006 a0001c0002t0014 a0001c0004t0004 others(6): Show a0001c0002t0006 a0001c0002t0014 a0001c0004t0004 a0001c0004t0046 a0001c0005t0003 a0003c0011t0002 a0003c0011t0009 a0008c0047t0003 a0008c0048t0007	a0001c0002t0006g0049 a0001c0002t0014g0055 a0001c0004t0004g0068 others(6): Show a0001c0002t0006g0049 a0001c0002t0014g0055 a0001c0004t0004g0068 a0001c0004t0046g0152 a0001c0005t0003g0107 a0003c0011t0002g0157 a0003c0011t0009g0061 a0008c0047t0003g0045 a0008c0048t0007g0099	9	84	0.1071	21	c.228 others(40): Show c.2281+7158_2281+7159insTTTTTTTTTTTTTTTTTTTTT	TNS3	ENSG00000136205.18	transcript	ENST00000311160.14	protein_coding	17/30			chr7	TogoVar
TNS3_chr7_47270154_47587111	47366725	C C	CCATGTGA others(14): Show CCATGTGAACCTGGGCAGGCCA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00323.hp1 others(59): Show HG00099.hp1 HG00140.hp1 HG00323.hp1 HG00544.hp1 HG00642.hp2 HG00738.hp1 HG00738.hp2 HG01071.hp1 HG01074.hp2 HG01081.hp2 HG01106.hp1 HG01168.hp2 HG01192.hp1 HG01243.hp2 HG01255.hp2 HG01258.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01517.hp2 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01978.hp1 HG01981.hp1 HG01981.hp2 HG02055.hp2 HG02109.hp2 HG02258.hp1 HG02300.hp1 HG02486.hp2 HG02602.hp2 HG02630.hp2 HG02683.hp1 HG02735.hp1 HG02738.hp2 HG02970.hp2 HG03041.hp2 HG03239.hp2 HG03490.hp2 HG03654.hp1 HG03654.hp2 HG03831.hp1 HG04115.hp1 HG04199.hp1 NA18522.hp1 NA18522.hp2 NA18939.hp1 NA18946.hp1 NA18952.hp2 NA18972.hp1 NA18986.hp1 NA18995.hp1 NA18998.hp1 NA19043.hp2 NA19085.hp2 NA20752.hp2 NA20905.hp1 NA21309.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0008 a0009 a0011 a0012	a0001c0002 a0001c0004 a0001c0005 others(17): Show a0001c0002 a0001c0004 a0001c0005 a0001c0012 a0001c0016 a0001c0022 a0001c0023 a0001c0034 a0001c0045 a0001c0056 a0001c0061 a0002c0008 a0002c0044 a0003c0011 a0003c0014 a0008c0047 a0008c0048 a0009c0051 a0011c0024 a0012c0046	a0001c0002t0005 a0001c0002t0006 a0001c0002t0008 others(42): Show a0001c0002t0005 a0001c0002t0006 a0001c0002t0008 a0001c0002t0011 a0001c0002t0013 a0001c0002t0014 a0001c0002t0018 a0001c0002t0041 a0001c0002t0053 a0001c0002t0057 a0001c0002t0059 a0001c0004t0001 a0001c0004t0004 a0001c0004t0007 a0001c0004t0046 a0001c0004t0054 a0001c0004t0055 a0001c0004t0056 a0001c0005t0002 a0001c0005t0003 a0001c0005t0037 a0001c0012t0009 a0001c0012t0011 a0001c0012t0015 a0001c0016t0027 a0001c0022t0001 a0001c0023t0011 a0001c0034t0005 a0001c0045t0002 a0001c0056t0034 a0001c0061t0006 a0002c0008t0001 a0002c0008t0010 a0002c0008t0012 a0002c0008t0020 a0002c0044t0016 a0003c0011t0002 a0003c0011t0009 a0003c0014t0002 a0003c0014t0009 a0008c0047t0003 a0008c0048t0007 a0009c0051t0011 a0011c0024t0022 a0012c0046t0061	a0001c0002t0005g0142 a0001c0002t0006g0049 a0001c0002t0006g0140 others(59): Show a0001c0002t0005g0142 a0001c0002t0006g0049 a0001c0002t0006g0140 a0001c0002t0006g0151 a0001c0002t0006g0155 a0001c0002t0008g0048 a0001c0002t0011g0086 a0001c0002t0011g0104 a0001c0002t0013g0131 a0001c0002t0013g0138 a0001c0002t0014g0055 a0001c0002t0014g0072 a0001c0002t0018g0143 a0001c0002t0041g0116 a0001c0002t0053g0114 a0001c0002t0057g0097 a0001c0002t0059g0089 a0001c0004t0001g0038 a0001c0004t0001g0105 a0001c0004t0004g0040 a0001c0004t0004g0068 a0001c0004t0004g0096 a0001c0004t0004g0156 a0001c0004t0004g0162 a0001c0004t0004g0166 a0001c0004t0007g0084 a0001c0004t0007g0186 a0001c0004t0046g0152 a0001c0004t0054g0102 a0001c0004t0055g0058 a0001c0004t0056g0124 a0001c0005t0002g0178 a0001c0005t0003g0041 a0001c0005t0003g0107 a0001c0005t0003g0170 a0001c0005t0003g0171 a0001c0005t0037g0117 a0001c0012t0009g0134 a0001c0012t0011g0087 a0001c0012t0015g0167 a0001c0016t0027g0020 a0001c0022t0001g0154 a0001c0023t0011g0073 a0001c0034t0005g0194 a0001c0045t0002g0108 a0001c0056t0034g0051 a0001c0061t0006g0098 a0002c0008t0001g0060 a0002c0008t0010g0033 a0002c0008t0012g0126 a0002c0008t0020g0132 a0002c0044t0016g0007 a0003c0011t0002g0009 a0003c0011t0002g0157 a0003c0011t0009g0061 a0003c0014t0002g0001 a0003c0014t0009g0082 a0008c0047t0003g0045 a0008c0048t0007g0099 a0009c0051t0011g0050 a0011c0024t0022g0146 a0012c0046t0061g0196	62	194	0.3196	21	c.228 others(40): Show c.2281+1619_2281+1639dupTGGCCTGCCCAGGTTCACATG	TNS3	ENSG00000136205.18	transcript	ENST00000311160.14	protein_coding	17/30			chr7	TogoVar
TNS3_chr7_47270154_47587111	47389109	C C	CAGAAGCA others(14): Show CAGAAGCAGAAGAAGAAGAAGA	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0043 a0001c0003t0043	a0001c0003t0043g0004 a0001c0003t0043g0004	1	151	0.0066	21	c.102 others(40): Show c.1024+7690_1024+7691insTCTTCTTCTTCTTCTGCTTCT	TNS3	ENSG00000136205.18	transcript	ENST00000311160.14	protein_coding	16/30			chr7	TogoVar
TNS3_chr7_47270154_47587111	47530838	A A	AAAAAAAA others(14): Show AAAAAAAAAAAAAAAAATATAT	intron_variant intron_variant	MODIFIER	HG00544.hp1 NA18945.hp1 HG00544.hp1 NA18945.hp1	a0001 a0001	a0001c0004 a0001c0030 a0001c0004 a0001c0030	a0001c0004t0001 a0001c0030t0004 a0001c0004t0001 a0001c0030t0004	a0001c0004t0001g0038 a0001c0030t0004g0074 a0001c0004t0001g0038 a0001c0030t0004g0074	2	55	0.0364	21	c.-26 others(40): Show c.-264-1692_-264-1691insATATATTTTTTTTTTTTTTTT	TNS3	ENSG00000136205.18	transcript	ENST00000311160.14	protein_coding	1/30			chr7	TogoVar
TNS3_chr7_47270154_47587111	47530838	A A	AAAAAAAA others(14): Show AAAAAAAAAAAAAAATATATAT	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG01934.hp2	a0001 a0001	a0001c0061 a0001c0061	a0001c0061t0006 a0001c0061t0006	a0001c0061t0006g0098 a0001c0061t0006g0098	1	54	0.0185	21	c.-26 others(40): Show c.-264-1692_-264-1691insATATATATTTTTTTTTTTTTT	TNS3	ENSG00000136205.18	transcript	ENST00000311160.14	protein_coding	1/30			chr7	TogoVar
TOGARAM1_chr14_44957190_45079431	45063479	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG04199.hp1 HG04199.hp1	a0002 a0002	a0002c0016 a0002c0016	a0002c0016t0003 a0002c0016t0003	a0002c0016t0003g0007 a0002c0016t0003g0007	1	83	0.0120	21	c.456 others(40): Show c.4560-3097_4560-3077dupTTTTTTTTTTTTTTTTTTTTT	TOGARAM1	ENSG00000198718.13	transcript	ENST00000361462.7	protein_coding	16/19		INFO_REALIGN_3_PRIME	chr14	TogoVar
TOGARAM2_chr2_28976298_29057230	28983199	T T	TATATATA others(14): Show TATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0078 a0078	a0078c0092 a0078c0092	a0078c0092t0001 a0078c0092t0001	a0078c0092t0001g0245 a0078c0092t0001g0245	1	321	0.0031	21	c.-11 others(40): Show c.-111+1661_-111+1662insATATATATATATATATATATA	TOGARAM2	ENSG00000189350.13	transcript	ENST00000379558.5	protein_coding	1/19			chr2	TogoVar
TOLLIP_chr11_1269371_1314632	1272391	C C	CCCCCCCC others(14): Show CCCCCCCCGCCCCGCGCCCTGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0017 a0001c0009t0017	a0001c0009t0017g0083 a0001c0009t0017g0083	1	346	0.0029	21	c.46 others(32): Show c.4647_*4648insCCAGGGCGCGGGGCGGGGGGG	TOLLIP	ENSG00000078902.16	transcript	ENST00000317204.11	protein_coding		1979		chr11	TogoVar
TOM1L2_chr17_17838511_17977400	17913239	G G	GGGAGAGG others(14): Show GGGAGAGGGAGAGGGAGACCGT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00558.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0009 a0001c0001t0001g0009	1	238	0.0042	21	c.53- others(36): Show c.53-5709_53-5708insACGGTCTCCCTCTCCCTCTCC	TOM1L2	ENSG00000175662.18	transcript	ENST00000379504.8	protein_coding	1/14			chr17	TogoVar
TOMM20L_chr14_58390930_58413702	58394213	A A	ATATATAT others(14): Show ATATATATATATTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG01261.hp2 HG02055.hp2 others(2): Show HG00140.hp2 HG01261.hp2 HG02055.hp2 HG06807.hp1 NA18979.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0128 a0001c0001t0001g0214 others(2): Show a0001c0001t0001g0011 a0001c0001t0001g0128 a0001c0001t0001g0214 a0001c0001t0001g0323 a0001c0001t0001g0341	5	18	0.2778	21	c.-17 others(32): Show c.-1745_-1744insTATATATATATTTTTTTTTTT	TOMM20L	ENSG00000196860.8	transcript	ENST00000360945.7	protein_coding		1716		chr14	TogoVar
TOMM20L_chr14_58390930_58413702	58394213	A A	ATATATAT others(14): Show ATATATATTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0142 a0001c0001t0001g0142	1	14	0.0714	21	c.-17 others(32): Show c.-1745_-1744insTATATATTTTTTTTTTTTTTT	TOMM20L	ENSG00000196860.8	transcript	ENST00000360945.7	protein_coding		1716		chr14	TogoVar
TOMM20L_chr14_58390930_58413702	58394213	A A	ATATATTT others(14): Show ATATATTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0112 a0001c0001t0001g0112	1	14	0.0714	21	c.-17 others(32): Show c.-1745_-1744insTATATTTTTTTTTTTTTTTTT	TOMM20L	ENSG00000196860.8	transcript	ENST00000360945.7	protein_coding		1716		chr14	TogoVar
TOMM20L_chr14_58390930_58413702	58394213	A A	ATATTTTT others(14): Show ATATTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0288 a0001c0001t0001g0288	1	14	0.0714	21	c.-17 others(32): Show c.-1745_-1744insTATTTTTTTTTTTTTTTTTTT	TOMM20L	ENSG00000196860.8	transcript	ENST00000360945.7	protein_coding		1716		chr14	TogoVar
TOMM20L_chr14_58390930_58413702	58404119	A A	ATATATAT others(14): Show ATATATATATATATATATTTTT	intron_variant intron_variant	MODIFIER	NA19066.hp2 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0066 a0001c0001t0001g0066	1	32	0.0313	21	c.262 others(38): Show c.262+1359_262+1360insATATATATATATATATTTTTT	TOMM20L	ENSG00000196860.8	transcript	ENST00000360945.7	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr14	TogoVar
TOMM20L_chr14_58390930_58413702	58404119	A A	ATATATAT others(14): Show ATATATATATATATATTTTTTT	intron_variant intron_variant	MODIFIER	HG02735.hp2 HG02735.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0209 a0001c0001t0001g0209	1	32	0.0313	21	c.262 others(38): Show c.262+1359_262+1360insATATATATATATATTTTTTTT	TOMM20L	ENSG00000196860.8	transcript	ENST00000360945.7	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr14	TogoVar
TOMM20L_chr14_58390930_58413702	58404119	A A	ATATATAT others(14): Show ATATATATATATATTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0282 a0001c0004t0001g0282	1	32	0.0313	21	c.262 others(38): Show c.262+1359_262+1360insATATATATATATTTTTTTTTT	TOMM20L	ENSG00000196860.8	transcript	ENST00000360945.7	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr14	TogoVar
TOMM70_chr3_100358431_100406089	100376369	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0180 a0001c0001t0002g0180	1	193	0.0052	21	c.109 others(40): Show c.1093-1218_1093-1217insAAAAAAAAAAAAAAAAAAAAA	TOMM70	ENSG00000154174.8	transcript	ENST00000284320.6	protein_coding	6/11			chr3	TogoVar
TOP1_chr20_41023822_41129487	41089020	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01109.hp2 HG02809.hp1 others(1): Show HG00738.hp2 HG01109.hp2 HG02809.hp1 NA18964.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0126 a0001c0001t0001g0137 a0001c0001t0001g0281 others(1): Show a0001c0001t0001g0126 a0001c0001t0001g0137 a0001c0001t0001g0281 a0001c0001t0001g0303	4	67	0.0597	21	c.615 others(38): Show c.615-3450_615-3430dupTTTTTTTTTTTTTTTTTTTTT	TOP1	ENSG00000198900.7	transcript	ENST00000361337.3	protein_coding	8/20		INFO_REALIGN_3_PRIME	chr20	TogoVar
TOP3A_chr17_18266428_18319994	18288148	T T	TATATATA others(14): Show TATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02027.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0223 a0001c0001t0002g0223	1	382	0.0026	21	c.159 others(40): Show c.1597+2408_1597+2409insTATATATATATATATATATAT	TOP3A	ENSG00000177302.16	transcript	ENST00000321105.10	protein_coding	13/18			chr17	TogoVar
TOPAZ1_chr3_44236886_44337098	44269471	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0156 a0002c0002t0001g0156	1	46	0.0217	21	c.324 others(38): Show c.3246+181_3246+201dupTTTTTTTTTTTTTTTTTTTTT	TOPAZ1	ENSG00000173769.4	transcript	ENST00000309765.4	protein_coding	7/19		INFO_REALIGN_3_PRIME	chr3	TogoVar
TOPAZ1_chr3_44236886_44337098	44298910	T T	TATATATA others(14): Show TATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG02129.hp2 HG02886.hp2 HG01261.hp2 HG02129.hp2 HG02886.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0006 a0001c0001 a0002c0006	a0001c0001t0001 a0002c0006t0001 a0001c0001t0001 a0002c0006t0001	a0001c0001t0001g0057 a0001c0001t0001g0112 a0002c0006t0001g0009 a0001c0001t0001g0057 a0001c0001t0001g0112 a0002c0006t0001g0009	3	161	0.0186	21	c.379 others(40): Show c.3798-5105_3798-5104insATATATATATATATATATATA	TOPAZ1	ENSG00000173769.4	transcript	ENST00000309765.4	protein_coding	12/19			chr3	TogoVar
TOR1AIP2_chr1_179834976_179882803	179840889	T T	TATAATAA others(14): Show TATAATAATAATAATAATAATA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00544.hp1 HG01192.hp1 HG02040.hp2 others(17): Show HG00544.hp1 HG01192.hp1 HG02040.hp2 HG02135.hp2 HG02886.hp1 HG03453.hp1 HG03471.hp1 HG03490.hp1 HG03492.hp1 HG03540.hp2 HG03579.hp1 NA18953.hp1 NA18971.hp1 NA18981.hp1 NA18990.hp1 NA19001.hp2 NA19002.hp1 NA19012.hp1 NA19059.hp1 NA19078.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0004 a0001c0001t0021 a0001c0001t0060 others(7): Show a0001c0001t0004 a0001c0001t0021 a0001c0001t0060 a0001c0001t0061 a0001c0001t0063 a0001c0001t0066 a0001c0001t0068 a0001c0001t0071 a0001c0001t0088 a0001c0005t0048	a0001c0001t0004g0007 a0001c0001t0004g0117 a0001c0001t0004g0152 others(13): Show a0001c0001t0004g0007 a0001c0001t0004g0117 a0001c0001t0004g0152 a0001c0001t0004g0155 a0001c0001t0004g0165 a0001c0001t0004g0170 a0001c0001t0021g0118 a0001c0001t0021g0121 a0001c0001t0060g0154 a0001c0001t0061g0173 a0001c0001t0063g0161 a0001c0001t0066g0163 a0001c0001t0068g0164 a0001c0001t0071g0082 a0001c0001t0088g0172 a0001c0005t0048g0093	20	169	0.1183	21	c.51 others(32): Show c.5161_*5181dupTATTATTATTATTATTATTAT	TOR1AIP2	ENSG00000169905.13	transcript	ENST00000609928.6	protein_coding	7/7	5181		chr1	TogoVar

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