Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CHD1_chr5_98848985_98934007	98883861	A A	ATATATAT others(14): Show ATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0227 a0001c0003t0002g0227	1	334	0.0030	21	c.256 others(38): Show c.2569-625_2569-624insATATATATATATATATATATA	CHD1	ENSG00000153922.12	transcript	ENST00000614616.5	protein_coding	18/35			chr5	TogoVar
CHD1_chr5_98848985_98934007	98911144	A A	ATATATAT others(14): Show ATATATATATATATATACATAT	intron_variant intron_variant	MODIFIER	NA19003.hp2 NA19003.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0298 a0001c0001t0001g0298	1	334	0.0030	21	c.54- others(36): Show c.54-6047_54-6046insATATGTATATATATATATATA	CHD1	ENSG00000153922.12	transcript	ENST00000614616.5	protein_coding	2/35			chr5	TogoVar
CHD1_chr5_98848985_98934007	98911144	A A	ATATATAT others(14): Show ATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18990.hp1 NA18990.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0263 a0001c0001t0001g0263	1	334	0.0030	21	c.54- others(36): Show c.54-6047_54-6046insATATATATATATATATATATA	CHD1	ENSG00000153922.12	transcript	ENST00000614616.5	protein_coding	2/35			chr5	TogoVar
CHD1_chr5_98848985_98934007	98911146	A A	AAATATAT others(14): Show AAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19077.hp1 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0289 a0001c0001t0001g0289	1	334	0.0030	21	c.54- others(36): Show c.54-6049_54-6048insATATATATATATATATATATT	CHD1	ENSG00000153922.12	transcript	ENST00000614616.5	protein_coding	2/35			chr5	TogoVar
CHD1_chr5_98848985_98934007	98911146	A A	ATATATAT others(14): Show ATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00323.hp2 NA19066.hp2 HG00323.hp2 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0009 a0001c0001t0001 a0001c0003t0009	a0001c0001t0001g0290 a0001c0003t0009g0191 a0001c0001t0001g0290 a0001c0003t0009g0191	2	334	0.0060	21	c.54- others(36): Show c.54-6049_54-6048insATATATATATATATATATATA	CHD1	ENSG00000153922.12	transcript	ENST00000614616.5	protein_coding	2/35			chr5	TogoVar
CHD1_chr5_98848985_98934007	98917299	C C	CCAAAAAA others(14): Show CCAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02572.hp2 HG01109.hp1 HG02572.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0006 a0001c0003t0006	a0001c0003t0006g0063 a0001c0003t0006g0064 a0001c0003t0006g0063 a0001c0003t0006g0064	2	334	0.0060	21	c.53+ others(36): Show c.53+9034_53+9035insTTTTTTTTTTTTTTTTTTTTG	CHD1	ENSG00000153922.12	transcript	ENST00000614616.5	protein_coding	2/35			chr5	TogoVar
CHD3_chr17_7883789_7917755	7885304	T T	TCCGCCGC others(14): Show TCCGCCGCCGCCGCCGCCGCCG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18942.hp1 NA18972.hp2 NA18942.hp1 NA18972.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0150 a0001c0001t0001g0001 a0001c0001t0001g0150	2	366	0.0055	21	c.-36 others(32): Show c.-3697_-3696insCCGCCGCCGCCGCCGCCGCCG	CHD3	ENSG00000170004.19	transcript	ENST00000330494.12	protein_coding		3484		chr17	TogoVar
CHD3_chr17_7883789_7917755	7885307	C C	CCCGCCGC others(14): Show CCCGCCGCCGCCGCCGCCGCCG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19000.hp2 NA19000.hp2	a0006 a0006	a0006c0017 a0006c0017	a0006c0017t0001 a0006c0017t0001	a0006c0017t0001g0047 a0006c0017t0001g0047	1	366	0.0027	21	c.-36 others(32): Show c.-3694_-3693insCCGCCGCCGCCGCCGCCGCCG	CHD3	ENSG00000170004.19	transcript	ENST00000330494.12	protein_coding		3481		chr17	TogoVar
CHD5_chr1_6096787_6185321	6140967	A A	AAATAATA others(14): Show AAATAATAATAATAATAATAAT	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG03492.hp1 NA18906.hp2 HG02895.hp1 HG03492.hp1 NA18906.hp2	a0001 a0001	a0001c0004 a0001c0008 a0001c0010 a0001c0004 a0001c0008 a0001c0010	a0001c0004t0004 a0001c0008t0005 a0001c0010t0004 a0001c0004t0004 a0001c0008t0005 a0001c0010t0004	a0001c0004t0004g0081 a0001c0008t0005g0230 a0001c0010t0004g0030 a0001c0004t0004g0081 a0001c0008t0005g0230 a0001c0010t0004g0030	3	320	0.0094	21	c.243 others(40): Show c.2436+1140_2436+1160dupATTATTATTATTATTATTATT	CHD5	ENSG00000116254.18	transcript	ENST00000262450.8	protein_coding	15/41			chr1	TogoVar
CHD6_chr20_41397083_41623377	41419554	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02965.hp1 NA18522.hp2 HG02965.hp1 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0073 a0001c0001t0009g0075 a0001c0001t0009g0073 a0001c0001t0009g0075	2	324	0.0062	21	c.612 others(38): Show c.6127+933_6127+953dupTTTTTTTTTTTTTTTTTTTTT	CHD6	ENSG00000124177.16	transcript	ENST00000373233.8	protein_coding	31/36			chr20	TogoVar
CHD6_chr20_41397083_41623377	41504077	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02004.hp2 HG03490.hp1 HG02004.hp2 HG03490.hp1	a0001 a0019 a0001 a0019	a0001c0001 a0019c0027 a0001c0001 a0019c0027	a0001c0001t0002 a0019c0027t0001 a0001c0001t0002 a0019c0027t0001	a0001c0001t0002g0235 a0019c0027t0001g0317 a0001c0001t0002g0235 a0019c0027t0001g0317	2	324	0.0062	21	c.853 others(38): Show c.853-4741_853-4721dupTTTTTTTTTTTTTTTTTTTTT	CHD6	ENSG00000124177.16	transcript	ENST00000373233.8	protein_coding	5/36			chr20	TogoVar
CHD7_chr8_60673740_60873028	60678773	G G	GGCGGCGG others(14): Show GGCGGCGGCGGCGGCGGCGGCA	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0023	a0001c0001t0023g0213 a0001c0001t0023g0213	1	236	0.0042	21	c.-46 others(30): Show c.-467_-466insGGCAGCGGCGGCGGCGGCGGC	CHD7	ENSG00000171316.14	transcript	ENST00000423902.7	protein_coding	1/38	62642	INFO_REALIGN_3_PRIME	chr8	TogoVar
CHDH_chr3_53807335_53851419	53810758	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01069.hp2 HG03654.hp1 HG01069.hp2 HG03654.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0054 a0001c0003t0054	a0001c0003t0054g0119 a0001c0003t0054g0169 a0001c0003t0054g0119 a0001c0003t0054g0169	2	392	0.0051	21	c.69 others(32): Show c.6998_*7018dupTTTTTTTTTTTTTTTTTTTTT	CHDH	ENSG00000016391.11	transcript	ENST00000315251.11	protein_coding		1576		chr3	TogoVar
CHDH_chr3_53807335_53851419	53821062	C C	CACTGGGC others(14): Show CACTGGGCAGGTCTAACATCAT	intron_variant intron_variant	MODIFIER	NA18956.hp1 NA18956.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0016 a0002c0002t0016	a0002c0002t0016g0256 a0002c0002t0016g0256	1	392	0.0026	21	c.986 others(36): Show c.986-455_986-454insATGATGTTAGACCTGCCCAGT	CHDH	ENSG00000016391.11	transcript	ENST00000315251.11	protein_coding	5/8			chr3	TogoVar
CHFR_chr12_132827356_132892605	132828702	C C	CCCGCCGC others(14): Show CCCGCCGCCCCACGCCCGGCCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(359): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18956.hp1 NA18956.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19012.hp2 NA19043.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19077.hp1 NA19077.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007	a0001c0001 a0001c0004 a0001c0010 others(12): Show a0001c0001 a0001c0004 a0001c0010 a0001c0015 a0001c0016 a0002c0002 a0002c0007 a0002c0011 a0002c0013 a0003c0003 a0003c0008 a0004c0006 a0005c0009 a0006c0014 a0007c0012	a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 others(149): Show a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0001c0001t0023 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0033 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044 a0001c0001t0050 a0001c0001t0051 a0001c0001t0052 a0001c0001t0053 a0001c0001t0070 a0001c0001t0072 a0001c0001t0073 a0001c0001t0074 a0001c0001t0079 a0001c0001t0080 a0001c0001t0081 a0001c0001t0082 a0001c0001t0083 a0001c0001t0084 a0001c0001t0085 a0001c0001t0086 a0001c0001t0087 a0001c0001t0088 a0001c0001t0089 a0001c0001t0090 a0001c0001t0091 a0001c0001t0092 a0001c0001t0093 a0001c0001t0094 a0001c0001t0095 a0001c0001t0096 a0001c0001t0097 a0001c0001t0098 a0001c0001t0099 a0001c0001t0100 a0001c0001t0101 a0001c0001t0102 a0001c0001t0103 a0001c0001t0104 a0001c0001t0105 a0001c0001t0106 a0001c0001t0107 a0001c0001t0108 a0001c0001t0109 a0001c0001t0110 a0001c0001t0111 a0001c0001t0112 a0001c0001t0113 a0001c0001t0114 a0001c0001t0115 a0001c0001t0116 a0001c0001t0117 a0001c0001t0118 a0001c0001t0119 a0001c0001t0143 a0001c0001t0144 a0001c0001t0145 a0001c0001t0146 a0001c0001t0147 a0001c0001t0148 a0001c0001t0149 a0001c0001t0150 a0001c0001t0151 a0001c0001t0152 a0001c0001t0153 a0001c0004t0003 a0001c0004t0007 a0001c0004t0017 a0001c0004t0018 a0001c0004t0022 a0001c0004t0034 a0001c0004t0035 a0001c0004t0036 a0001c0004t0056 a0001c0004t0057 a0001c0004t0058 a0001c0004t0059 a0001c0004t0060 a0001c0010t0033 a0001c0015t0003 a0001c0016t0017 a0002c0002t0002 a0002c0002t0004 a0002c0002t0005 a0002c0002t0028 a0002c0002t0029 a0002c0002t0030 a0002c0002t0045 a0002c0002t0046 a0002c0002t0047 a0002c0002t0048 a0002c0002t0049 a0002c0002t0120 a0002c0002t0121 a0002c0002t0122 a0002c0002t0123 a0002c0002t0125 a0002c0002t0126 a0002c0002t0127 a0002c0002t0128 a0002c0002t0129 a0002c0002t0130 a0002c0002t0132 a0002c0002t0133 a0002c0002t0136 a0002c0002t0137 a0002c0002t0138 a0002c0002t0139 a0002c0002t0140 a0002c0002t0141 a0002c0002t0142 a0002c0007t0002 a0002c0011t0124 a0002c0013t0005 a0003c0003t0001 a0003c0003t0013 a0003c0003t0019 a0003c0003t0020 a0003c0003t0037 a0003c0003t0061 a0003c0003t0062 a0003c0003t0063 a0003c0003t0064 a0003c0003t0065 a0003c0003t0066 a0003c0003t0067 a0003c0003t0068 a0003c0003t0069 a0003c0008t0019 a0004c0006t0031 a0004c0006t0032 a0004c0006t0131 a0004c0006t0134 a0004c0006t0135 a0005c0009t0054 a0005c0009t0055 a0006c0014t0002 a0007c0012t0071	a0001c0001t0006g0126 a0001c0001t0006g0132 a0001c0001t0006g0134 others(337): Show a0001c0001t0006g0126 a0001c0001t0006g0132 a0001c0001t0006g0134 a0001c0001t0006g0135 a0001c0001t0006g0137 a0001c0001t0006g0138 a0001c0001t0006g0139 a0001c0001t0006g0145 a0001c0001t0006g0147 a0001c0001t0006g0150 a0001c0001t0006g0152 a0001c0001t0008g0013 a0001c0001t0008g0240 a0001c0001t0008g0256 a0001c0001t0008g0266 a0001c0001t0008g0286 a0001c0001t0008g0304 a0001c0001t0008g0306 a0001c0001t0009g0005 a0001c0001t0009g0030 a0001c0001t0009g0031 a0001c0001t0009g0033 a0001c0001t0009g0037 a0001c0001t0010g0038 a0001c0001t0010g0236 a0001c0001t0010g0258 a0001c0001t0010g0259 a0001c0001t0010g0277 a0001c0001t0010g0289 a0001c0001t0010g0310 a0001c0001t0011g0014 a0001c0001t0011g0243 a0001c0001t0011g0248 a0001c0001t0011g0264 a0001c0001t0011g0287 a0001c0001t0011g0290 a0001c0001t0012g0002 a0001c0001t0012g0123 a0001c0001t0012g0125 a0001c0001t0012g0148 a0001c0001t0012g0168 a0001c0001t0014g0004 a0001c0001t0014g0278 a0001c0001t0014g0279 a0001c0001t0014g0280 a0001c0001t0015g0235 a0001c0001t0015g0244 a0001c0001t0015g0247 a0001c0001t0015g0294 a0001c0001t0015g0298 a0001c0001t0015g0300 a0001c0001t0016g0234 a0001c0001t0016g0249 a0001c0001t0016g0250 a0001c0001t0016g0251 a0001c0001t0016g0302 a0001c0001t0023g0001 a0001c0001t0025g0242 a0001c0001t0025g0255 a0001c0001t0025g0262 a0001c0001t0026g0016 a0001c0001t0026g0271 a0001c0001t0027g0015 a0001c0001t0027g0307 a0001c0001t0033g0129 a0001c0001t0033g0149 a0001c0001t0040g0253 a0001c0001t0040g0265 a0001c0001t0041g0257 a0001c0001t0041g0305 a0001c0001t0042g0275 a0001c0001t0042g0276 a0001c0001t0043g0017 a0001c0001t0044g0018 a0001c0001t0050g0130 a0001c0001t0050g0136 a0001c0001t0051g0146 a0001c0001t0051g0153 a0001c0001t0052g0169 a0001c0001t0052g0170 a0001c0001t0053g0141 a0001c0001t0053g0151 a0001c0001t0070g0178 a0001c0001t0072g0352 a0001c0001t0073g0032 a0001c0001t0074g0034 a0001c0001t0079g0245 a0001c0001t0080g0237 a0001c0001t0081g0252 a0001c0001t0082g0246 a0001c0001t0083g0272 a0001c0001t0084g0292 a0001c0001t0085g0285 a0001c0001t0086g0299 a0001c0001t0087g0281 a0001c0001t0088g0269 a0001c0001t0089g0282 a0001c0001t0090g0039 a0001c0001t0091g0065 a0001c0001t0092g0239 a0001c0001t0093g0284 a0001c0001t0094g0270 a0001c0001t0095g0295 a0001c0001t0096g0293 a0001c0001t0097g0283 a0001c0001t0098g0296 a0001c0001t0099g0238 a0001c0001t0100g0297 a0001c0001t0101g0303 a0001c0001t0102g0308 a0001c0001t0103g0274 a0001c0001t0104g0309 a0001c0001t0105g0273 a0001c0001t0106g0291 a0001c0001t0107g0241 a0001c0001t0108g0254 a0001c0001t0109g0301 a0001c0001t0110g0263 a0001c0001t0111g0260 a0001c0001t0112g0233 a0001c0001t0113g0261 a0001c0001t0114g0288 a0001c0001t0115g0267 a0001c0001t0116g0311 a0001c0001t0117g0232 a0001c0001t0118g0268 a0001c0001t0119g0035 a0001c0001t0143g0124 a0001c0001t0144g0127 a0001c0001t0145g0312 a0001c0001t0146g0131 a0001c0001t0147g0133 a0001c0001t0148g0143 a0001c0001t0149g0142 a0001c0001t0150g0144 a0001c0001t0151g0140 a0001c0001t0152g0154 a0001c0001t0153g0155 a0001c0004t0003g0003 a0001c0004t0003g0011 a0001c0004t0003g0188 a0001c0004t0003g0189 a0001c0004t0003g0190 a0001c0004t0003g0191 a0001c0004t0003g0194 a0001c0004t0003g0197 a0001c0004t0003g0198 a0001c0004t0003g0199 a0001c0004t0003g0200 a0001c0004t0003g0201 a0001c0004t0003g0202 a0001c0004t0003g0204 a0001c0004t0003g0225 a0001c0004t0003g0226 a0001c0004t0003g0227 a0001c0004t0003g0228 a0001c0004t0003g0231 a0001c0004t0007g0012 a0001c0004t0007g0215 a0001c0004t0007g0216 a0001c0004t0007g0217 a0001c0004t0007g0218 a0001c0004t0007g0219 a0001c0004t0007g0224 a0001c0004t0017g0220 a0001c0004t0017g0221 a0001c0004t0017g0222 a0001c0004t0018g0086 a0001c0004t0018g0208 a0001c0004t0018g0209 a0001c0004t0018g0212 a0001c0004t0022g0193 a0001c0004t0022g0203 a0001c0004t0022g0229 a0001c0004t0034g0195 a0001c0004t0034g0196 a0001c0004t0035g0210 a0001c0004t0035g0213 a0001c0004t0036g0206 a0001c0004t0036g0207 a0001c0004t0056g0211 a0001c0004t0057g0214 a0001c0004t0058g0187 a0001c0004t0059g0192 a0001c0004t0060g0230 a0001c0010t0033g0128 a0001c0015t0003g0205 a0001c0016t0017g0223 a0002c0002t0002g0009 a0002c0002t0002g0045 a0002c0002t0002g0046 a0002c0002t0002g0048 a0002c0002t0002g0050 a0002c0002t0002g0055 a0002c0002t0002g0062 a0002c0002t0002g0072 a0002c0002t0002g0073 a0002c0002t0002g0079 a0002c0002t0002g0080 a0002c0002t0002g0081 a0002c0002t0002g0094 a0002c0002t0002g0098 a0002c0002t0002g0100 a0002c0002t0002g0104 a0002c0002t0002g0105 a0002c0002t0002g0113 a0002c0002t0002g0115 a0002c0002t0002g0116 a0002c0002t0002g0122 a0002c0002t0004g0006 a0002c0002t0004g0054 a0002c0002t0004g0070 a0002c0002t0004g0074 a0002c0002t0004g0075 a0002c0002t0004g0077 a0002c0002t0004g0108 a0002c0002t0004g0110 a0002c0002t0004g0111 a0002c0002t0004g0120 a0002c0002t0004g0165 a0002c0002t0004g0166 a0002c0002t0005g0008 a0002c0002t0005g0071 a0002c0002t0005g0087 a0002c0002t0005g0088 a0002c0002t0005g0090 a0002c0002t0005g0092 a0002c0002t0005g0093 a0002c0002t0005g0099 a0002c0002t0005g0107 a0002c0002t0005g0112 a0002c0002t0005g0114 a0002c0002t0028g0056 a0002c0002t0028g0057 a0002c0002t0028g0060 a0002c0002t0029g0078 a0002c0002t0029g0097 a0002c0002t0029g0167 a0002c0002t0030g0101 a0002c0002t0030g0102 a0002c0002t0030g0103 a0002c0002t0045g0007 a0002c0002t0046g0082 a0002c0002t0046g0083 a0002c0002t0047g0010 a0002c0002t0048g0040 a0002c0002t0048g0044 a0002c0002t0049g0042 a0002c0002t0049g0043 a0002c0002t0120g0091 a0002c0002t0121g0061 a0002c0002t0122g0058 a0002c0002t0123g0109 a0002c0002t0125g0066 a0002c0002t0126g0117 a0002c0002t0127g0076 a0002c0002t0128g0051 a0002c0002t0129g0119 a0002c0002t0130g0095 a0002c0002t0132g0047 a0002c0002t0133g0041 a0002c0002t0136g0085 a0002c0002t0137g0067 a0002c0002t0138g0089 a0002c0002t0139g0063 a0002c0002t0140g0096 a0002c0002t0141g0084 a0002c0002t0142g0068 a0002c0007t0002g0064 a0002c0007t0002g0069 a0002c0011t0124g0059 a0002c0013t0005g0121 a0003c0003t0001g0052 a0003c0003t0001g0053 a0003c0003t0001g0313 a0003c0003t0001g0314 a0003c0003t0001g0315 a0003c0003t0001g0316 a0003c0003t0001g0317 a0003c0003t0001g0318 a0003c0003t0001g0325 a0003c0003t0001g0326 a0003c0003t0001g0327 a0003c0003t0001g0328 a0003c0003t0001g0329 a0003c0003t0001g0330 a0003c0003t0001g0331 a0003c0003t0001g0332 a0003c0003t0001g0333 a0003c0003t0001g0334 a0003c0003t0001g0335 a0003c0003t0001g0337 a0003c0003t0001g0339 a0003c0003t0001g0340 a0003c0003t0001g0341 a0003c0003t0001g0342 a0003c0003t0001g0343 a0003c0003t0001g0344 a0003c0003t0001g0353 a0003c0003t0001g0354 a0003c0003t0001g0355 a0003c0003t0001g0356 a0003c0003t0013g0021 a0003c0003t0013g0022 a0003c0003t0013g0024 a0003c0003t0013g0025 a0003c0003t0013g0026 a0003c0003t0013g0027 a0003c0003t0019g0346 a0003c0003t0019g0351 a0003c0003t0020g0319 a0003c0003t0020g0320 a0003c0003t0020g0322 a0003c0003t0020g0324 a0003c0003t0037g0347 a0003c0003t0037g0348 a0003c0003t0061g0020 a0003c0003t0062g0029 a0003c0003t0063g0345 a0003c0003t0064g0028 a0003c0003t0065g0023 a0003c0003t0066g0338 a0003c0003t0067g0336 a0003c0003t0068g0321 a0003c0003t0069g0323 a0003c0008t0019g0349 a0003c0008t0019g0350 a0004c0006t0031g0161 a0004c0006t0031g0162 a0004c0006t0031g0163 a0004c0006t0032g0156 a0004c0006t0032g0159 a0004c0006t0032g0160 a0004c0006t0131g0158 a0004c0006t0134g0157 a0004c0006t0135g0164 a0005c0009t0054g0118 a0005c0009t0055g0106 a0006c0014t0002g0049 a0007c0012t0071g0019	362	378	0.9577	21	c.12 others(34): Show c.12851_*12852insAGGCCGGGCGTGGGGCGGCGG	CHFR	ENSG00000072609.18	transcript	ENST00000450056.7	protein_coding		3653		chr12	TogoVar
CHGA_chr14_92918150_92940285	92920654	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0025 a0001c0001t0001g0025	1	447	0.0022	21	c.-27 others(32): Show c.-2706_-2705insAAAAAAAAAAAAAAAAAAAAA	CHGA	ENSG00000100604.13	transcript	ENST00000216492.10	protein_coding		2495		chr14	TogoVar
CHL1_chr3_191763_414417	333124	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0125 a0002c0002t0001g0125	1	290	0.0035	21	c.385 others(38): Show c.385+4778_385+4779insTTTTTTTTTTTTTTTTTTTTT	CHL1	ENSG00000134121.10	transcript	ENST00000256509.7	protein_coding	5/27		INFO_REALIGN_3_PRIME	chr3	TogoVar
CHMP2A_chr19_58546566_58560105	58557278	A A	ACCCCCAG others(14): Show ACCCCCAGGCGCCTCTCCTGGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	420	0.0024	21	c.-23 others(32): Show c.-2336_-2316dupCCCAGGAGAGGCGCCTGGGGG	CHMP2A	ENSG00000130724.10	transcript	ENST00000312547.7	protein_coding		2174		chr19	TogoVar
CHMP7_chr8_23238637_23266999	23239948	T T	TCCCAAAG others(14): Show TCCCAAAGTGCTGGAGTACAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18971.hp2 NA18971.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0101 a0001c0001t0001g0101	1	438	0.0023	21	c.-43 others(32): Show c.-4337_-4336insCCCAAAGTGCTGGAGTACAGG	CHMP7	ENSG00000147457.14	transcript	ENST00000397677.6	protein_coding		3688		chr8	TogoVar
CHMP7_chr8_23238637_23266999	23241367	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp2 HG00741.hp2 HG01243.hp2 others(2): Show HG00738.hp2 HG00741.hp2 HG01243.hp2 HG02683.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0011 a0001c0001t0006 a0001c0001t0011	a0001c0001t0006g0018 a0001c0001t0006g0037 a0001c0001t0006g0163 others(1): Show a0001c0001t0006g0018 a0001c0001t0006g0037 a0001c0001t0006g0163 a0001c0001t0011g0177	5	438	0.0114	21	c.-29 others(32): Show c.-2918_-2917insTTTTTTTTTTTTTTTTTTTTT	CHMP7	ENSG00000147457.14	transcript	ENST00000397677.6	protein_coding		2269		chr8	TogoVar
CHM_chrX_85856180_86052558	85913332	A A	AAAAAGAA others(14): Show AAAAAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG02683.hp2 HG02965.hp1 others(4): Show HG00621.hp1 HG02683.hp2 HG02965.hp1 HG03831.hp2 NA19066.hp1 NA20805.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0026 a0001c0001t0001g0040 a0001c0001t0001g0125 others(4): Show a0001c0001t0001g0026 a0001c0001t0001g0040 a0001c0001t0001g0125 a0001c0001t0001g0141 a0001c0001t0001g0147 a0001c0001t0001g0185 a0001c0001t0003g0156	7	245	0.0286	21	c.116 others(40): Show c.1167-1995_1167-1994insCTTTCTTTCTTTCTTTCTTTT	CHM	ENSG00000188419.14	transcript	ENST00000357749.7	protein_coding	8/14			chrX	TogoVar
CHM_chrX_85856180_86052558	85913332	A A	AGAAAGAA others(14): Show AGAAAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0142 a0001c0001t0001g0142	1	245	0.0041	21	c.116 others(40): Show c.1167-1995_1167-1994insCTTTCTTTCTTTCTTTCTTTC	CHM	ENSG00000188419.14	transcript	ENST00000357749.7	protein_coding	8/14			chrX	TogoVar
CHM_chrX_85856180_86052558	86026102	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0219 a0001c0001t0011g0219	1	245	0.0041	21	c.116 others(38): Show c.116+1368_116+1388dupAAAAAAAAAAAAAAAAAAAAA	CHM	ENSG00000188419.14	transcript	ENST00000357749.7	protein_coding	2/14			chrX	TogoVar
CHN1_chr2_174793809_175010381	174847773	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02300.hp2 HG02300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0032 a0001c0001t0008g0032	1	276	0.0036	21	c.550 others(36): Show c.550-837_550-817dupTTTTTTTTTTTTTTTTTTTTT	CHN1	ENSG00000128656.15	transcript	ENST00000409900.9	protein_coding	6/12			chr2	TogoVar
CHN2_chr7_29189775_29519328	29252578	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG01943.hp2 HG02074.hp1 others(2): Show HG00140.hp1 HG01943.hp2 HG02074.hp1 HG02148.hp1 NA19079.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0002c0004	a0001c0001t0001 a0001c0002t0002 a0001c0002t0004 others(2): Show a0001c0001t0001 a0001c0002t0002 a0001c0002t0004 a0002c0003t0004 a0002c0004t0007	a0001c0001t0001g0005 a0001c0002t0002g0105 a0001c0002t0004g0088 others(2): Show a0001c0001t0001g0005 a0001c0002t0002g0105 a0001c0002t0004g0088 a0002c0003t0004g0146 a0002c0004t0007g0157	5	232	0.0216	21	c.49+ others(38): Show c.49+57596_49+57616dupTTTTTTTTTTTTTTTTTTTTT	CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29252585	T T	TTTTTTGT others(14): Show TTTTTTGTTTTGTTTTGTTTTG	intron_variant intron_variant	MODIFIER	NA19000.hp1 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0205 a0001c0001t0007g0205	1	232	0.0043	21	c.49+ others(38): Show c.49+57600_49+57601insGTTTTGTTTTGTTTTGTTTTT	CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29268322	A A	ACACACAC others(14): Show ACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA19085.hp1 NA19085.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0004 a0002c0003t0004	a0002c0003t0004g0101 a0002c0003t0004g0101	1	232	0.0043	21	c.49+ others(38): Show c.49+73332_49+73333insCACACACACACACACACACAC	CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	1/12			chr7	TogoVar
CHN2_chr7_29189775_29519328	29305822	C C	CCTCCTCC others(14): Show CCTCCTCCTCCTCCTCGTCTTT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00741.hp2 HG01167.hp1 others(18): Show HG00323.hp1 HG00741.hp2 HG01167.hp1 HG01884.hp2 HG01928.hp2 HG02129.hp2 HG02135.hp1 HG02145.hp2 HG02451.hp1 HG02735.hp1 HG02896.hp2 HG03195.hp1 HG03225.hp1 HG03239.hp1 HG03492.hp1 HG03710.hp2 HG03831.hp2 HG03834.hp2 HG04184.hp2 HG04204.hp2 HG06807.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0005 others(2): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006 a0002c0003	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(10): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0015 a0001c0001t0028 a0001c0002t0002 a0001c0002t0004 a0001c0002t0010 a0001c0002t0025 a0001c0005t0001 a0001c0006t0002 a0001c0006t0004 a0002c0003t0002	a0001c0001t0001g0136 a0001c0001t0001g0184 a0001c0001t0001g0191 others(18): Show a0001c0001t0001g0136 a0001c0001t0001g0184 a0001c0001t0001g0191 a0001c0001t0001g0195 a0001c0001t0003g0057 a0001c0001t0003g0190 a0001c0001t0005g0133 a0001c0001t0005g0156 a0001c0001t0005g0181 a0001c0001t0015g0117 a0001c0001t0028g0050 a0001c0002t0002g0086 a0001c0002t0002g0189 a0001c0002t0002g0215 a0001c0002t0004g0196 a0001c0002t0010g0220 a0001c0002t0025g0024 a0001c0005t0001g0185 a0001c0006t0002g0198 a0001c0006t0004g0182 a0002c0003t0002g0070	21	232	0.0905	21	c.50- others(38): Show c.50-48788_50-48787insGTCTTTCTCCTCCTCCTCCTC	CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29437597	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00597.hp2 HG01192.hp1 others(5): Show HG00597.hp1 HG00597.hp2 HG01192.hp1 HG02074.hp1 HG02074.hp2 HG03017.hp2 NA18970.hp2 NA19063.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0004 a0001c0001 a0001c0002 a0002c0004	a0001c0001t0003 a0001c0001t0008 a0001c0002t0004 others(3): Show a0001c0001t0003 a0001c0001t0008 a0001c0002t0004 a0002c0004t0001 a0002c0004t0005 a0002c0004t0007	a0001c0001t0003g0044 a0001c0001t0003g0111 a0001c0001t0008g0131 others(5): Show a0001c0001t0003g0044 a0001c0001t0003g0111 a0001c0001t0008g0131 a0001c0001t0008g0139 a0001c0002t0004g0118 a0002c0004t0001g0059 a0002c0004t0005g0202 a0002c0004t0007g0157	8	232	0.0345	21	c.576 others(40): Show c.576+36785_576+36786insAAAAAAAAAAAAAAAAAAAAA	CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	6/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHN2_chr7_29189775_29519328	29442934	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG02258.hp2 HG01069.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0011 a0001c0002t0002 a0001c0001t0011 a0001c0002t0002	a0001c0001t0011g0053 a0001c0002t0002g0168 a0001c0001t0011g0053 a0001c0002t0002g0168	2	232	0.0086	21	c.577 others(40): Show c.577-37328_577-37327insTTTTTTTTTTTTTTTTTTTTT	CHN2	ENSG00000106069.26	transcript	ENST00000222792.11	protein_coding	6/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHODL_chr21_18239833_18272370	18251745	A A	AATATATA others(14): Show AATATATAAAATAAATATTTAT	intron_variant intron_variant	MODIFIER	HG04228.hp1 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0109 a0001c0001t0001g0109	1	402	0.0025	21	c.80- others(36): Show c.80-4764_80-4763insATATATAAAATAAATATTTAT	CHODL	ENSG00000154645.14	transcript	ENST00000299295.7	protein_coding	1/5			chr21	TogoVar
CHORDC1_chr11_90195429_90228049	90198209	T T	TAAAGCCT others(14): Show TAAAGCCTATTCACTCAACTGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00323.hp1 others(212): Show HG00099.hp1 HG00140.hp1 HG00323.hp1 HG00323.hp2 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG01069.hp1 HG01070.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp2 HG01168.hp2 HG01169.hp1 HG01192.hp1 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp2 HG01361.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01993.hp2 HG02004.hp1 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02071.hp1 HG02074.hp1 HG02074.hp2 HG02080.hp2 HG02129.hp2 HG02132.hp2 HG02148.hp2 HG02165.hp2 HG02257.hp1 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp2 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02602.hp2 HG02615.hp2 HG02622.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp2 HG03017.hp1 HG03017.hp2 HG03098.hp1 HG03139.hp1 HG03139.hp2 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp2 HG03516.hp2 HG03579.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp2 HG03710.hp2 HG03831.hp2 HG03834.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18941.hp2 NA18942.hp1 NA18944.hp1 NA18945.hp2 NA18949.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18956.hp1 NA18956.hp2 NA18960.hp1 NA18961.hp2 NA18963.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18974.hp1 NA18977.hp1 NA18980.hp2 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18984.hp2 NA18985.hp1 NA18986.hp2 NA18987.hp2 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19006.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp2 NA19011.hp2 NA19054.hp1 NA19059.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19083.hp1 NA19083.hp2 NA19085.hp2 NA19088.hp2 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA20129.hp1 NA20300.hp1 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA20905.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(9): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0012 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022	a0001c0001t0002g0006 a0001c0001t0002g0009 a0001c0001t0002g0010 others(107): Show a0001c0001t0002g0006 a0001c0001t0002g0009 a0001c0001t0002g0010 a0001c0001t0002g0013 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0026 a0001c0001t0002g0027 a0001c0001t0002g0028 a0001c0001t0002g0042 a0001c0001t0002g0044 a0001c0001t0002g0098 a0001c0001t0002g0099 a0001c0001t0002g0100 a0001c0001t0002g0101 a0001c0001t0002g0102 a0001c0001t0002g0103 a0001c0001t0002g0104 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0108 a0001c0001t0002g0110 a0001c0001t0002g0111 a0001c0001t0002g0112 a0001c0001t0002g0113 a0001c0001t0002g0114 a0001c0001t0002g0115 a0001c0001t0002g0116 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0003g0002 a0001c0001t0003g0007 a0001c0001t0003g0016 a0001c0001t0003g0023 a0001c0001t0003g0024 a0001c0001t0003g0039 a0001c0001t0003g0041 a0001c0001t0003g0062 a0001c0001t0003g0063 a0001c0001t0003g0064 a0001c0001t0003g0065 a0001c0001t0003g0066 a0001c0001t0003g0067 a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0003g0071 a0001c0001t0003g0072 a0001c0001t0003g0073 a0001c0001t0003g0074 a0001c0001t0003g0075 a0001c0001t0003g0076 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0087 a0001c0001t0003g0088 a0001c0001t0003g0091 a0001c0001t0004g0003 a0001c0001t0004g0015 a0001c0001t0004g0034 a0001c0001t0004g0053 a0001c0001t0004g0054 a0001c0001t0004g0060 a0001c0001t0004g0165 a0001c0001t0004g0166 a0001c0001t0004g0167 a0001c0001t0004g0168 a0001c0001t0004g0169 a0001c0001t0004g0170 a0001c0001t0004g0172 a0001c0001t0004g0173 a0001c0001t0004g0174 a0001c0001t0004g0175 a0001c0001t0004g0176 a0001c0001t0005g0014 a0001c0001t0005g0047 a0001c0001t0005g0128 a0001c0001t0005g0129 a0001c0001t0005g0130 a0001c0001t0005g0131 a0001c0001t0005g0132 a0001c0001t0005g0133 a0001c0001t0006g0035 a0001c0001t0006g0038 a0001c0001t0006g0070 a0001c0001t0006g0089 a0001c0001t0006g0181 a0001c0001t0007g0012 a0001c0001t0007g0185 a0001c0001t0008g0043 a0001c0001t0008g0061 a0001c0001t0008g0105 a0001c0001t0008g0109 a0001c0001t0008g0117 a0001c0001t0010g0055 a0001c0001t0010g0177 a0001c0001t0010g0178 a0001c0001t0010g0179 a0001c0001t0010g0180 a0001c0001t0012g0057 a0001c0001t0012g0058 a0001c0001t0012g0059 a0001c0001t0020g0090 a0001c0001t0021g0171 a0001c0001t0022g0182	215	412	0.5218	21	c.41 others(32): Show c.4195_*4196insTCAGTTGAGTGAATAGGCTTT	CHORDC1	ENSG00000110172.12	transcript	ENST00000320585.11	protein_coding		2219		chr11	TogoVar
CHP2_chr16_23750026_23763935	23759379	C C	CTCTTTCT others(14): Show CTCTTTCTTTCTTTCTTTCTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0013 a0001c0001t0002g0013	1	392	0.0026	21	c.17 others(32): Show c.1796_*1797insTCTTTCTTTCTTTCTTTCTTT	CHP2	ENSG00000166869.3	transcript	ENST00000300113.3	protein_coding		445		chr16	TogoVar
CHP2_chr16_23750026_23763935	23759423	T T	TCTTTCTT others(14): Show TCTTTCTTTCTTTCTTTCTTTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01361.hp1 HG01496.hp1 HG01975.hp1 others(3): Show HG01361.hp1 HG01496.hp1 HG01975.hp1 HG01975.hp2 HG02486.hp1 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0002 a0001c0001t0001g0010 a0002c0002t0001g0002 a0001c0001t0001g0002 a0001c0001t0001g0010 a0002c0002t0001g0002	6	392	0.0153	21	c.18 others(32): Show c.1840_*1841insCTTTCTTTCTTTCTTTCTTTC	CHP2	ENSG00000166869.3	transcript	ENST00000300113.3	protein_coding		489		chr16	TogoVar
CHPT1_chr12_101692640_101734074	101713687	A A	AATCTAGT others(14): Show AATCTAGTAGCAAATCTAGAGT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00544.hp2 HG00597.hp1 others(41): Show HG00140.hp2 HG00544.hp2 HG00597.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01106.hp1 HG01123.hp2 HG01175.hp2 HG01346.hp1 HG01358.hp2 HG01433.hp1 HG01928.hp2 HG01943.hp1 HG01975.hp1 HG02056.hp1 HG02155.hp1 HG03710.hp2 NA18612.hp2 NA18747.hp1 NA18945.hp2 NA18946.hp1 NA18955.hp2 NA18956.hp1 NA18960.hp1 NA18962.hp2 NA18966.hp1 NA18969.hp2 NA18974.hp1 NA18975.hp1 NA18977.hp2 NA18992.hp2 NA18997.hp2 NA18999.hp2 NA19003.hp1 NA19009.hp1 NA19009.hp2 NA19065.hp1 NA19068.hp2 NA19070.hp1 NA19074.hp1 NA19075.hp1 NA19081.hp1 NA19084.hp1	a0001 a0003 a0001 a0003	a0001c0004 a0003c0006 a0001c0004 a0003c0006	a0001c0004t0001 a0003c0006t0001 a0003c0006t0004 a0001c0004t0001 a0003c0006t0001 a0003c0006t0004	a0001c0004t0001g0005 a0001c0004t0001g0009 a0001c0004t0001g0010 others(21): Show a0001c0004t0001g0005 a0001c0004t0001g0009 a0001c0004t0001g0010 a0001c0004t0001g0021 a0001c0004t0001g0042 a0001c0004t0001g0043 a0001c0004t0001g0226 a0001c0004t0001g0227 a0001c0004t0001g0228 a0001c0004t0001g0229 a0001c0004t0001g0231 a0001c0004t0001g0232 a0001c0004t0001g0233 a0001c0004t0001g0234 a0001c0004t0001g0235 a0001c0004t0001g0236 a0001c0004t0001g0238 a0003c0006t0001g0005 a0003c0006t0001g0223 a0003c0006t0001g0224 a0003c0006t0001g0225 a0003c0006t0001g0230 a0003c0006t0001g0243 a0003c0006t0004g0086	44	402	0.1095	21	c.274 others(36): Show c.274-396_274-395insAGCAAATCTAGAGTATCTAGT	CHPT1	ENSG00000111666.11	transcript	ENST00000229266.8	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHRM2_chr7_136863652_137025213	136867786	T T	TATATATA others(14): Show TATATATATATATATATTCTGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0118 a0001c0001t0016g0118	1	320	0.0031	21	c.-14 others(32): Show c.-1489_-1488insATATATATATATATATTCTGG	CHRM2	ENSG00000181072.12	transcript	ENST00000680005.1	protein_coding		865		chr7	TogoVar
CHRM2_chr7_136863652_137025213	136867941	G G	GATATATA others(14): Show GATATATATATATATTCTGGAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 HG03927.hp1 NA18983.hp2 others(1): Show HG02015.hp1 HG03927.hp1 NA18983.hp2 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0016 a0001c0001t0001g0033 a0001c0001t0001g0040 others(1): Show a0001c0001t0001g0016 a0001c0001t0001g0033 a0001c0001t0001g0040 a0001c0002t0002g0036	4	320	0.0125	21	c.-13 others(32): Show c.-1334_-1333insATATATATATATATTCTGGAT	CHRM2	ENSG00000181072.12	transcript	ENST00000680005.1	protein_coding		710		chr7	TogoVar
CHRM2_chr7_136863652_137025213	136973143	T T	TGACGGTG others(14): Show TGACGGTGTTAGGGATGGTGGC	intron_variant intron_variant	MODIFIER	HG03486.hp2 NA18939.hp2 NA19066.hp2 HG03486.hp2 NA18939.hp2 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0002t0001 a0001c0002t0005 a0001c0001t0004 a0001c0002t0001 a0001c0002t0005	a0001c0001t0004g0256 a0001c0002t0001g0027 a0001c0002t0005g0030 a0001c0001t0004g0256 a0001c0002t0001g0027 a0001c0002t0005g0030	3	320	0.0094	21	c.-12 others(42): Show c.-124-19043_-124-19023dupGACGGTGTTAGGGATGGTGGC	CHRM2	ENSG00000181072.12	transcript	ENST00000680005.1	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHRM2_chr7_136863652_137025213	136973232	T T	TGACGGTG others(14): Show TGACGGTGTTAGGGATGGTGGC	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01433.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0034 a0001c0001t0034	a0001c0001t0034g0143 a0001c0001t0034g0143	1	320	0.0031	21	c.-12 others(42): Show c.-124-18954_-124-18934dupGACGGTGTTAGGGATGGTGGC	CHRM2	ENSG00000181072.12	transcript	ENST00000680005.1	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHRM3_chr1_239381568_239920450	239385815	C C	CTCTCTTT others(14): Show CTCTCTTTCTTTCTTTCTTTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0077 a0001c0001t0005g0077	1	116	0.0086	21	c.-19 others(32): Show c.-1933_-1932insTCTCTTTCTTTCTTTCTTTCT	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding		752		chr1	TogoVar
CHRM3_chr1_239381568_239920450	239385818	T T	TCTTTCTT others(14): Show TCTTTCTTTCTTTCTTTCTTTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01433.hp2 HG03139.hp1 HG03139.hp2 others(2): Show HG01433.hp2 HG03139.hp1 HG03139.hp2 NA18944.hp2 NA19012.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0020 others(2): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0020 a0001c0001t0045 a0001c0001t0052	a0001c0001t0001g0013 a0001c0001t0006g0003 a0001c0001t0020g0021 others(2): Show a0001c0001t0001g0013 a0001c0001t0006g0003 a0001c0001t0020g0021 a0001c0001t0045g0014 a0001c0001t0052g0106	5	116	0.0431	21	c.-19 others(32): Show c.-1930_-1929insCTTTCTTTCTTTCTTTCTTTC	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding		749		chr1	TogoVar
CHRM3_chr1_239381568_239920450	239662890	C C	CTCTTCTT others(14): Show CTCTTCTTCTTCTTCTTCTTCT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0056 a0001c0001t0056	a0001c0001t0056g0079 a0001c0001t0056g0079	1	116	0.0086	21	c.-24 others(42): Show c.-249-15294_-249-15293insTTCTTCTTCTTCTTCTTCTTC	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRM3_chr1_239381568_239920450	239662893	C C	CTCCTCTT others(14): Show CTCCTCTTCTTCTTCTTCTTCT	intron_variant intron_variant	MODIFIER	HG02970.hp2 NA18906.hp1 HG02970.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0019 a0001c0001t0009 a0001c0001t0019	a0001c0001t0009g0045 a0001c0001t0019g0040 a0001c0001t0009g0045 a0001c0001t0019g0040	2	116	0.0172	21	c.-24 others(42): Show c.-249-15291_-249-15290insCTCTTCTTCTTCTTCTTCTTC	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRM3_chr1_239381568_239920450	239662893	C C	CTCTTCTT others(14): Show CTCTTCTTCTTCTTCTTCTTCT	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG03098.hp1 HG03130.hp2 HG02258.hp1 HG03098.hp1 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0037 a0001c0001t0042 a0001c0001t0055 a0001c0001t0037 a0001c0001t0042 a0001c0001t0055	a0001c0001t0037g0029 a0001c0001t0042g0080 a0001c0001t0055g0113 a0001c0001t0037g0029 a0001c0001t0042g0080 a0001c0001t0055g0113	3	116	0.0259	21	c.-24 others(42): Show c.-249-15274_-249-15254dupTCTTCTTCTTCTTCTTCTTCT	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRM3_chr1_239381568_239920450	239662893	C C	CTCTTCTT others(14): Show CTCTTCTTCTTCTTCTTTTTCT	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0003 a0001c0001t0006g0003	1	116	0.0086	21	c.-24 others(42): Show c.-249-15277_-249-15276insTTTCTTCTTCTTCTTCTTCTT	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRM3_chr1_239381568_239920450	239813916	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01106.hp2 NA20129.hp2 HG01106.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0057 a0001c0001t0013 a0001c0001t0057	a0001c0001t0013g0078 a0001c0001t0057g0084 a0001c0001t0013g0078 a0001c0001t0057g0084	2	116	0.0172	21	c.-14 others(42): Show c.-146-13318_-146-13317insAAAAAAAAAAAAAAAAAAAAA	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRM3_chr1_239381568_239920450	239848032	A A	AAACCTGT others(14): Show AAACCTGTGTTTAAATGGTGTT	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02818.hp1 HG03195.hp1 others(3): Show HG02723.hp2 HG02818.hp1 HG03195.hp1 HG03209.hp1 HG03471.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0009 a0001c0001t0018 others(3): Show a0001c0001t0003 a0001c0001t0009 a0001c0001t0018 a0001c0001t0019 a0001c0001t0038 a0001c0001t0060	a0001c0001t0003g0039 a0001c0001t0009g0111 a0001c0001t0018g0022 others(3): Show a0001c0001t0003g0039 a0001c0001t0009g0111 a0001c0001t0018g0022 a0001c0001t0019g0025 a0001c0001t0038g0032 a0001c0001t0060g0001	6	116	0.0517	21	c.-20 others(40): Show c.-20+20656_-20+20657insCCTGTGTTTAAATGGTGTTAA	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRM3_chr1_239381568_239920450	239874297	A A	ATATATAT others(14): Show ATATATATATCTATATACACAG	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00609.hp2 HG01256.hp1 others(13): Show HG00438.hp2 HG00609.hp2 HG01256.hp1 HG01346.hp1 HG01515.hp2 HG02040.hp1 HG02083.hp1 HG02735.hp2 HG03239.hp1 HG03710.hp1 HG04115.hp2 NA18939.hp2 NA18955.hp1 NA19068.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0011 a0001c0001t0022 a0001c0001t0028 a0001c0001t0044 a0001c0001t0050	a0001c0001t0001g0005 a0001c0001t0001g0058 a0001c0001t0001g0083 others(13): Show a0001c0001t0001g0005 a0001c0001t0001g0058 a0001c0001t0001g0083 a0001c0001t0001g0105 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0003g0115 a0001c0001t0004g0016 a0001c0001t0007g0055 a0001c0001t0007g0068 a0001c0001t0008g0067 a0001c0001t0011g0071 a0001c0001t0022g0008 a0001c0001t0028g0017 a0001c0001t0044g0104 a0001c0001t0050g0015	16	116	0.1379	21	c.-19 others(40): Show c.-19-33127_-19-33126insCTATATACACAGTATATATAT	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRM3_chr1_239381568_239920450	239874299	A A	ATATATAT others(14): Show ATATATATATCTATATACACAG	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0074 a0001c0001t0002g0074	1	116	0.0086	21	c.-19 others(40): Show c.-19-33125_-19-33124insCTATATACACAGTATATATAT	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRM3_chr1_239381568_239920450	239874299	A A	ATATATAT others(14): Show ATATATATCTATATACACAGTG	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0107 a0001c0001t0002g0107	1	116	0.0086	21	c.-19 others(40): Show c.-19-33127_-19-33126insCTATATACACAGTGTATATAT	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr1	TogoVar

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