Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ADRM1_chr20_62297997_62313862	62309639	T T	TGGGGGGG others(15): Show TGGGGGGGTGGGACGGGGTGGGG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	368	0.0027	22	c.87 others(31): Show c.878_*879insGGGGGGGTGGGACGGGGTGGGG	ADRM1	ENSG00000130706.13	transcript	ENST00000253003.7	protein_coding		778		chr20	TogoVar
ADRM1_chr20_62297997_62313862	62309639	T T	TGGGGGGG others(15): Show TGGGGGGGTGGGAGGGGGTGGGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00423.hp2 HG01081.hp2 others(29): Show HG00140.hp1 HG00423.hp2 HG01081.hp2 HG01099.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp2 HG01243.hp2 HG01433.hp1 HG01515.hp1 HG01943.hp1 HG02056.hp1 HG02080.hp2 HG02083.hp1 HG02273.hp2 HG02523.hp1 HG02965.hp1 HG03669.hp1 HG03831.hp1 HG03927.hp1 NA18942.hp1 NA18943.hp2 NA18944.hp1 NA18952.hp2 NA18960.hp1 NA18964.hp2 NA18972.hp1 NA19010.hp1 NA19030.hp1 NA19067.hp2 NA19240.hp2 NA20752.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0005 a0001c0001 a0001c0002 a0002c0005	a0001c0001t0001 a0001c0002t0001 a0002c0005t0001 a0001c0001t0001 a0001c0002t0001 a0002c0005t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(12): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0015 a0001c0001t0001g0018 a0001c0001t0001g0022 a0001c0001t0001g0042 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0070 a0001c0002t0001g0005 a0002c0005t0001g0005	32	368	0.0870	22	c.87 others(31): Show c.878_*879insGGGGGGGTGGGAGGGGGTGGGG	ADRM1	ENSG00000130706.13	transcript	ENST00000253003.7	protein_coding		778		chr20	TogoVar
ADRM1_chr20_62297997_62313862	62309639	T T	TGGGGGGT others(15): Show TGGGGGGTGGGAGGGGGTGGGGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00733.hp1 HG00741.hp1 HG01071.hp2 others(9): Show HG00733.hp1 HG00741.hp1 HG01071.hp2 HG01081.hp1 HG01106.hp1 HG01109.hp2 HG01975.hp2 HG02486.hp1 HG02622.hp2 HG02647.hp1 HG03017.hp2 HG03669.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0002c0005	a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 a0002c0005t0001	a0001c0001t0001g0014 a0001c0002t0001g0005 a0001c0002t0001g0060 others(2): Show a0001c0001t0001g0014 a0001c0002t0001g0005 a0001c0002t0001g0060 a0001c0003t0001g0040 a0002c0005t0001g0005	12	368	0.0326	22	c.87 others(31): Show c.878_*879insGGGGGGTGGGAGGGGGTGGGGG	ADRM1	ENSG00000130706.13	transcript	ENST00000253003.7	protein_coding		778		chr20	TogoVar
ADSS1_chr14_104719229_104752310	104736881	G G	GATATATA others(15): Show GATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01975.hp2 HG02280.hp1 HG01975.hp2 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0198 a0001c0001t0002g0058 a0001c0001t0001g0198 a0001c0001t0002g0058	2	402	0.0050	22	c.296 others(39): Show c.296-1484_296-1463dupATATATATATATATATATATAT	ADSS1	ENSG00000185100.12	transcript	ENST00000330877.7	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr14	TogoVar
ADSS2_chr1_244403494_244456909	244435194	A A	AAAAAAAA others(15): Show AAAAAAAAAAAAAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0156 a0001c0001t0002g0156	1	408	0.0025	22	c.355 others(39): Show c.355+1630_355+1631insGTTTTTTTTTTTTTTTTTTTTT	ADSS2	ENSG00000035687.10	transcript	ENST00000366535.4	protein_coding	3/12			chr1	TogoVar
ADSS2_chr1_244403494_244456909	244444514	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG02683.hp1 HG06807.hp1 HG00323.hp1 HG02683.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0289 a0001c0001t0004g0160 a0001c0001t0004g0290 a0001c0001t0001g0289 a0001c0001t0004g0160 a0001c0001t0004g0290	3	408	0.0074	22	c.184 others(39): Show c.184-6768_184-6747dupTTTTTTTTTTTTTTTTTTTTTT	ADSS2	ENSG00000035687.10	transcript	ENST00000366535.4	protein_coding	1/12			chr1	TogoVar
AEBP2_chr12_19434492_19527227	19481092	C C	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02257.hp2 HG01243.hp1 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0150 a0001c0001t0005g0236 a0001c0001t0005g0150 a0001c0001t0005g0236	2	404	0.0050	22	c.987 others(39): Show c.987+7742_987+7763dupTTTTTTTTTTTTTTTTTTTTTT	AEBP2	ENSG00000139154.16	transcript	ENST00000266508.14	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr12	TogoVar
AFAP1L1_chr5_149266859_149348637	149307811	C C	CCTCTCTC others(15): Show CCTCTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG01346.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0203 a0001c0001t0003g0203	1	286	0.0035	22	c.747 others(37): Show c.747+204_747+205insCTCTCTCTCTCTCTCTCTCTCT	AFAP1L1	ENSG00000157510.14	transcript	ENST00000296721.9	protein_coding	7/18		INFO_REALIGN_3_PRIME	chr5	TogoVar
AFAP1L1_chr5_149266859_149348637	149307818	T T	TTCTCTCT others(15): Show TTCTCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00621.hp1 HG00735.hp2 others(24): Show HG00423.hp1 HG00621.hp1 HG00735.hp2 HG00738.hp2 HG01123.hp2 HG01255.hp1 HG01496.hp2 HG01934.hp2 HG02040.hp1 HG02258.hp2 HG02280.hp1 HG02976.hp2 HG03491.hp1 HG03654.hp2 HG03710.hp1 HG03710.hp2 HG04199.hp2 NA18971.hp2 NA18974.hp2 NA18986.hp1 NA18999.hp1 NA19011.hp1 NA19011.hp2 NA19063.hp2 NA19087.hp1 NA19087.hp2 NA20752.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0015 a0004c0004t0022	a0001c0001t0001g0010 a0001c0001t0001g0047 a0001c0001t0001g0057 others(24): Show a0001c0001t0001g0010 a0001c0001t0001g0047 a0001c0001t0001g0057 a0001c0001t0001g0072 a0001c0001t0001g0089 a0001c0001t0001g0118 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0173 a0001c0001t0001g0234 a0001c0001t0001g0248 a0001c0001t0001g0250 a0001c0001t0001g0271 a0001c0001t0001g0274 a0001c0001t0001g0280 a0001c0001t0002g0042 a0001c0001t0002g0073 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0119 a0001c0001t0002g0162 a0001c0001t0002g0254 a0001c0001t0002g0255 a0001c0001t0003g0123 a0001c0001t0004g0090 a0001c0001t0015g0116 a0004c0004t0022g0174	27	286	0.0944	22	c.747 others(37): Show c.747+223_747+244dupCTCTCTCTCTCTCTCTCTCTCT	AFAP1L1	ENSG00000157510.14	transcript	ENST00000296721.9	protein_coding	7/18		INFO_REALIGN_3_PRIME	chr5	TogoVar
AFAP1L2_chr10_114289824_114409502	114317142	C C	CGATTTTA others(15): Show CGATTTTACTAAGAAGCACATTT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00280.hp1 others(158): Show HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00642.hp1 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01109.hp1 HG01168.hp1 HG01168.hp2 HG01192.hp1 HG01192.hp2 HG01255.hp1 HG01257.hp2 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01516.hp1 HG01516.hp2 HG01884.hp1 HG01952.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02257.hp1 HG02258.hp2 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp2 HG02723.hp2 HG02735.hp2 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02976.hp1 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03225.hp1 HG03453.hp1 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp2 HG03579.hp2 HG03710.hp1 HG03831.hp1 HG03834.hp1 HG03942.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp2 HG06807.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18969.hp1 NA18969.hp2 NA18972.hp1 NA18979.hp2 NA18983.hp1 NA18990.hp1 NA18990.hp2 NA18993.hp1 NA18993.hp2 NA19000.hp1 NA19000.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp2 NA19012.hp1 NA19030.hp2 NA19043.hp2 NA19056.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19080.hp1 NA19081.hp2 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20752.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0004 others(6): Show a0001 a0002 a0004 a0005 a0006 a0007 a0010 a0012 a0013	a0001c0001 a0001c0002 a0001c0003 others(18): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0008 a0001c0011 a0001c0012 a0001c0016 a0001c0019 a0001c0020 a0001c0022 a0002c0005 a0002c0015 a0004c0009 a0004c0013 a0005c0010 a0006c0014 a0007c0017 a0010c0032 a0012c0034 a0013c0018	a0001c0001t0001 a0001c0001t0004 a0001c0001t0008 others(32): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0008 a0001c0001t0016 a0001c0001t0017 a0001c0002t0002 a0001c0002t0003 a0001c0002t0010 a0001c0003t0002 a0001c0003t0003 a0001c0003t0011 a0001c0004t0001 a0001c0004t0008 a0001c0004t0014 a0001c0008t0005 a0001c0011t0001 a0001c0011t0013 a0001c0012t0011 a0001c0016t0002 a0001c0019t0001 a0001c0020t0002 a0001c0022t0018 a0002c0005t0003 a0002c0005t0005 a0002c0015t0007 a0002c0015t0019 a0004c0009t0009 a0004c0009t0012 a0004c0013t0009 a0005c0010t0006 a0006c0014t0003 a0007c0017t0001 a0010c0032t0007 a0012c0034t0004 a0013c0018t0002	a0001c0001t0001g0035 a0001c0001t0001g0039 a0001c0001t0001g0040 others(158): Show a0001c0001t0001g0035 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0059 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0074 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0083 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0094 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0123 a0001c0001t0001g0129 a0001c0001t0001g0134 a0001c0001t0001g0137 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0152 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0172 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0179 a0001c0001t0001g0188 a0001c0001t0001g0191 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0212 a0001c0001t0001g0219 a0001c0001t0001g0224 a0001c0001t0001g0236 a0001c0001t0001g0256 a0001c0001t0001g0259 a0001c0001t0004g0016 a0001c0001t0004g0075 a0001c0001t0004g0082 a0001c0001t0004g0095 a0001c0001t0004g0118 a0001c0001t0004g0122 a0001c0001t0004g0169 a0001c0001t0004g0171 a0001c0001t0004g0178 a0001c0001t0004g0227 a0001c0001t0004g0230 a0001c0001t0008g0063 a0001c0001t0008g0073 a0001c0001t0016g0135 a0001c0001t0017g0136 a0001c0002t0002g0159 a0001c0002t0003g0007 a0001c0002t0003g0026 a0001c0002t0003g0028 a0001c0002t0003g0054 a0001c0002t0003g0055 a0001c0002t0003g0076 a0001c0002t0003g0086 a0001c0002t0003g0186 a0001c0002t0003g0189 a0001c0002t0003g0220 a0001c0002t0010g0036 a0001c0002t0010g0038 a0001c0003t0002g0042 a0001c0003t0002g0043 a0001c0003t0002g0045 a0001c0003t0002g0060 a0001c0003t0002g0062 a0001c0003t0002g0092 a0001c0003t0002g0096 a0001c0003t0002g0104 a0001c0003t0002g0120 a0001c0003t0002g0144 a0001c0003t0002g0147 a0001c0003t0002g0148 a0001c0003t0002g0165 a0001c0003t0002g0166 a0001c0003t0002g0210 a0001c0003t0002g0214 a0001c0003t0002g0223 a0001c0003t0002g0240 a0001c0003t0002g0241 a0001c0003t0002g0254 a0001c0003t0002g0261 a0001c0003t0002g0262 a0001c0003t0003g0103 a0001c0003t0003g0119 a0001c0003t0003g0235 a0001c0003t0011g0105 a0001c0004t0001g0004 a0001c0004t0001g0181 a0001c0004t0001g0182 a0001c0004t0001g0196 a0001c0004t0001g0245 a0001c0004t0001g0248 a0001c0004t0008g0056 a0001c0004t0008g0215 a0001c0004t0008g0260 a0001c0004t0014g0015 a0001c0008t0005g0008 a0001c0011t0001g0124 a0001c0011t0013g0246 a0001c0012t0011g0088 a0001c0012t0011g0089 a0001c0016t0002g0127 a0001c0016t0002g0128 a0001c0019t0001g0184 a0001c0020t0002g0258 a0001c0022t0018g0154 a0002c0005t0003g0023 a0002c0005t0005g0125 a0002c0005t0005g0249 a0002c0015t0007g0121 a0002c0015t0019g0247 a0004c0009t0009g0009 a0004c0009t0009g0079 a0004c0009t0009g0218 a0004c0009t0009g0242 a0004c0009t0012g0102 a0004c0013t0009g0020 a0004c0013t0009g0216 a0005c0010t0006g0138 a0006c0014t0003g0049 a0006c0014t0003g0050 a0007c0017t0001g0130 a0007c0017t0001g0131 a0010c0032t0007g0013 a0012c0034t0004g0244 a0013c0018t0002g0091	161	262	0.6145	22	c.407 others(39): Show c.407-1378_407-1377insAAATGTGCTTCTTAGTAAAATC	AFAP1L2	ENSG00000169129.16	transcript	ENST00000304129.9	protein_coding	5/18			chr10	TogoVar
AFAP1L2_chr10_114289824_114409502	114317142	C C	CGATTTTA others(15): Show CGATTTTACTAAGAAGCACGTTT	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0003 a0003	a0003c0026 a0003c0026	a0003c0026t0015 a0003c0026t0015	a0003c0026t0015g0157 a0003c0026t0015g0157	1	262	0.0038	22	c.407 others(39): Show c.407-1399_407-1378dupAAACGTGCTTCTTAGTAAAATC	AFAP1L2	ENSG00000169129.16	transcript	ENST00000304129.9	protein_coding	5/18			chr10	TogoVar
AFAP1L2_chr10_114289824_114409502	114318746	A A	AAAAAAAA others(15): Show AAAAAAAAAAAAAAGAAAAAAAG	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02647.hp2 HG02886.hp1 others(1): Show HG02622.hp1 HG02647.hp2 HG02886.hp1 HG04199.hp1	a0001 a0004 a0001 a0004	a0001c0003 a0001c0004 a0004c0009 a0001c0003 a0001c0004 a0004c0009	a0001c0003t0002 a0001c0003t0003 a0001c0004t0008 others(1): Show a0001c0003t0002 a0001c0003t0003 a0001c0004t0008 a0004c0009t0012	a0001c0003t0002g0223 a0001c0003t0003g0103 a0001c0004t0008g0056 others(1): Show a0001c0003t0002g0223 a0001c0003t0003g0103 a0001c0004t0008g0056 a0004c0009t0012g0102	4	262	0.0153	22	c.407 others(39): Show c.407-2982_407-2981insCTTTTTTTCTTTTTTTTTTTTT	AFAP1L2	ENSG00000169129.16	transcript	ENST00000304129.9	protein_coding	5/18			chr10	TogoVar
AFAP1L2_chr10_114289824_114409502	114318751	A A	AAAAAAAA others(15): Show AAAAAAAAAGAAAAAAAGAAAAG	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA21309.hp2 NA18906.hp2 NA21309.hp2	a0002 a0004 a0002 a0004	a0002c0015 a0004c0013 a0002c0015 a0004c0013	a0002c0015t0007 a0004c0013t0009 a0002c0015t0007 a0004c0013t0009	a0002c0015t0007g0121 a0004c0013t0009g0020 a0002c0015t0007g0121 a0004c0013t0009g0020	2	262	0.0076	22	c.407 others(39): Show c.407-2987_407-2986insCTTTTCTTTTTTTCTTTTTTTT	AFAP1L2	ENSG00000169129.16	transcript	ENST00000304129.9	protein_coding	5/18			chr10	TogoVar
AFAP1L2_chr10_114289824_114409502	114327147	T T	TTATATAT others(15): Show TTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG03490.hp1 HG03492.hp2 others(1): Show HG01261.hp1 HG03490.hp1 HG03492.hp2 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0016 a0001c0001 a0001c0016	a0001c0001t0001 a0001c0016t0002 a0001c0001t0001 a0001c0016t0002	a0001c0001t0001g0106 a0001c0001t0001g0113 a0001c0016t0002g0127 others(1): Show a0001c0001t0001g0106 a0001c0001t0001g0113 a0001c0016t0002g0127 a0001c0016t0002g0128	4	262	0.0153	22	c.316 others(39): Show c.316-3908_316-3887dupTATATATATATATATATATATA	AFAP1L2	ENSG00000169129.16	transcript	ENST00000304129.9	protein_coding	4/18			chr10	TogoVar
AFAP1_chr4_7753714_7944861	7827569	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG01258.hp2 HG02040.hp1 HG01256.hp2 HG01258.hp2 HG02040.hp1	a0002 a0003 a0002 a0003	a0002c0005 a0003c0006 a0002c0005 a0003c0006	a0002c0005t0035 a0003c0006t0005 a0002c0005t0035 a0003c0006t0005	a0002c0005t0035g0317 a0002c0005t0035g0318 a0003c0006t0005g0143 a0002c0005t0035g0317 a0002c0005t0035g0318 a0003c0006t0005g0143	3	318	0.0094	22	c.727 others(39): Show c.727-8399_727-8398insTTTTTTTTTTTTTTTTTTTTTT	AFAP1	ENSG00000196526.11	transcript	ENST00000420658.6	protein_coding	6/17			chr4	TogoVar
AFAP1_chr4_7753714_7944861	7834128	C C	CACACACA others(15): Show CACACACACACACACACACATAT	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG03453.hp2 HG02895.hp1 HG03453.hp2	a0001 a0002 a0001 a0002	a0001c0009 a0002c0005 a0001c0009 a0002c0005	a0001c0009t0042 a0002c0005t0004 a0001c0009t0042 a0002c0005t0004	a0001c0009t0042g0229 a0002c0005t0004g0306 a0001c0009t0042g0229 a0002c0005t0004g0306	2	318	0.0063	22	c.726 others(39): Show c.726+4395_726+4396insATATGTGTGTGTGTGTGTGTGT	AFAP1	ENSG00000196526.11	transcript	ENST00000420658.6	protein_coding	6/17			chr4	TogoVar
AFDN_chr6_167821911_167977023	167826857	A A	ACGACGGC others(15): Show ACGACGGCGGGCGGCGGCGCGCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01346.hp1 HG01346.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0061 a0001c0003t0001g0061	1	326	0.0031	22	c.-27 others(31): Show c.-276_-275insCGACGGCGGGCGGCGGCGCGCT	AFDN	ENSG00000130396.22	transcript	ENST00000683244.1	protein_coding		53		chr6	TogoVar
AFDN_chr6_167821911_167977023	167826857	A A	ACGGCGGC others(15): Show ACGGCGGCGGGCGGCGGCGCGCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01433.hp1 HG01433.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0071 a0001c0003t0001g0071	1	326	0.0031	22	c.-27 others(31): Show c.-276_-275insCGGCGGCGGGCGGCGGCGCGCT	AFDN	ENSG00000130396.22	transcript	ENST00000683244.1	protein_coding		53		chr6	TogoVar
AFF1_chr4_86930011_87146039	86969879	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG04228.hp1 HG04228.hp2 HG04228.hp1 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0040 a0001c0001t0003 a0001c0001t0040	a0001c0001t0003g0067 a0001c0001t0040g0055 a0001c0001t0003g0067 a0001c0001t0040g0055	2	294	0.0068	22	c.38+ others(39): Show c.38+21326_38+21327insAAAAAAAAAAAAAAAAAAAAAA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	86985181	C C	CTATATAT others(15): Show CTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG01256.hp1 HG01433.hp2 others(5): Show HG00558.hp1 HG01256.hp1 HG01433.hp2 HG02083.hp2 HG03486.hp1 HG03540.hp1 NA19009.hp2 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0011 a0001c0001t0031 others(1): Show a0001c0001t0001 a0001c0001t0011 a0001c0001t0031 a0001c0004t0023	a0001c0001t0001g0031 a0001c0001t0001g0046 a0001c0001t0001g0143 others(5): Show a0001c0001t0001g0031 a0001c0001t0001g0046 a0001c0001t0001g0143 a0001c0001t0001g0168 a0001c0001t0001g0170 a0001c0001t0011g0094 a0001c0001t0031g0131 a0001c0004t0023g0250	8	294	0.0272	22	c.38+ others(39): Show c.38+36623_38+36644dupTATATATATATATATATATATA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF2_chrX_148495617_149005663	148704354	A A	ATATATAT others(15): Show ATATATATGTGTATATATATATT	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG02451.hp2 HG03540.hp2 HG01934.hp1 HG02451.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0098 a0001c0001t0010 a0001c0001t0098	a0001c0001t0010g0115 a0001c0001t0010g0116 a0001c0001t0098g0119 a0001c0001t0010g0115 a0001c0001t0010g0116 a0001c0001t0098g0119	3	169	0.0178	22	c.104 others(43): Show c.1041+41593_1041+41594insGTGTATATATATATTTATATAT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148762420	T T	TATATATA others(15): Show TATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0078 a0001c0002t0078	a0001c0002t0078g0152 a0001c0002t0078g0152	1	169	0.0059	22	c.104 others(43): Show c.1042-47455_1042-47454insTATATATATATATATATATACA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148824060	C C	CCTCTCTC others(15): Show CCTCTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG03041.hp2 HG02809.hp2 HG03041.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0040 a0001c0002t0072 a0001c0002t0040 a0001c0002t0072	a0001c0002t0040g0111 a0001c0002t0072g0018 a0001c0002t0040g0111 a0001c0002t0072g0018	2	169	0.0118	22	c.108 others(43): Show c.1087-13584_1087-13563dupCTCTCTCTCTCTCTCTCTCTCT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	4/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148839894	G G	GGTGTGTG others(15): Show GGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0108 a0001c0002t0108	a0001c0002t0108g0002 a0001c0002t0108g0002	1	169	0.0059	22	c.117 others(41): Show c.1173+2182_1173+2203dupGTGTGTGTGTGTGTGTGTGTGT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	5/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148983953	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02896.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0095 a0001c0004t0095	a0001c0004t0095g0113 a0001c0004t0095g0113	1	169	0.0059	22	c.362 others(41): Show c.3623+3178_3623+3179insAAAAAAAAAAAAAAAAAAAAAA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	19/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF3_chr2_99540419_100147590	99648905	A A	ACTCTCTC others(15): Show ACTCTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0005 a0001c0005t0005	a0001c0005t0005g0092 a0001c0005t0005g0092	1	100	0.0100	22	c.118 others(39): Show c.1184+720_1184+721insAGAGAGAGAGAGAGAGAGAGAG	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	13/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99648917	A A	ACACACTC others(15): Show ACACACTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0042 a0001c0001t0004g0042	1	100	0.0100	22	c.118 others(39): Show c.1184+708_1184+709insAGAGAGAGAGAGAGAGAGTGTG	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	13/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99648917	A A	ACACTCTC others(15): Show ACACTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0078 a0001c0001t0007g0078	1	100	0.0100	22	c.118 others(39): Show c.1184+708_1184+709insAGAGAGAGAGAGAGAGAGAGTG	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	13/24			chr2	TogoVar
AFF4_chr5_132870395_132968634	132958465	C C	CAACAGAG others(15): Show CAACAGAGTGAGACCCTGTCTCA	intron_variant intron_variant	MODIFIER	NA18983.hp1 NA18983.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0327 a0001c0001t0002g0327	1	392	0.0026	22	c.-5+ others(37): Show c.-5+4793_-5+4794insTGAGACAGGGTCTCACTCTGTT	AFF4	ENSG00000072364.13	transcript	ENST00000265343.10	protein_coding	1/20			chr5	TogoVar
AFM_chr4_73476745_73509001	73479014	T T	TGAATGTA others(15): Show TGAATGTATGTATGTATGTATAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02004.hp2 HG02004.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0146 a0001c0001t0003g0146	1	368	0.0027	22	c.-27 others(33): Show c.-2762_-2761insGAATGTATGTATGTATGTATAC	AFM	ENSG00000079557.5	transcript	ENST00000226355.5	protein_coding		2730		chr4	TogoVar
AFP_chr4_73431221_73461174	73456450	G G	GAAGGCCA others(15): Show GAAGGCCATTTTATGAAAGAGGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02027.hp2 HG02027.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0009 a0001c0001t0002g0009	1	390	0.0026	22	c.83 others(31): Show c.830_*831insAAGGCCATTTTATGAAAGAGGA	AFP	ENSG00000081051.8	transcript	ENST00000395792.7	protein_coding		277		chr4	TogoVar
AFP_chr4_73431221_73461174	73459177	G G	GTGTGTGT others(15): Show GTGTGTGTGTGTGTGTGTATGCA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00738.hp2 HG02257.hp2 HG02280.hp2 others(13): Show HG00738.hp2 HG02257.hp2 HG02280.hp2 HG02735.hp1 HG02895.hp1 HG02896.hp1 HG02965.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03831.hp1 HG04115.hp1 NA18943.hp2 NA18950.hp1 NA19030.hp2 NA19085.hp1	a0001 a0002 a0011 a0001 a0002 a0011	a0001c0001 a0001c0003 a0002c0002 others(1): Show a0001c0001 a0001c0003 a0002c0002 a0011c0010	a0001c0001t0001 a0001c0001t0002 a0001c0003t0001 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0003t0001 a0002c0002t0002 a0011c0010t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0042 a0001c0001t0001g0060 a0001c0001t0002g0012 a0001c0001t0002g0074 a0001c0003t0001g0010 a0002c0002t0002g0066 a0011c0010t0001g0065	16	390	0.0410	22	c.35 others(33): Show c.3557_*3558insTGTGTGTGTGTGTGTGTATGCA	AFP	ENSG00000081051.8	transcript	ENST00000395792.7	protein_coding		3004		chr4	TogoVar
AGAP1_chr2_235489043_236136793	235536254	T T	TACACACA others(15): Show TACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp2 HG02922.hp1 others(4): Show HG00438.hp1 HG00438.hp2 HG02922.hp1 HG03453.hp2 HG04199.hp1 HG04199.hp2 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0014 others(3): Show a0001c0001 a0001c0002 a0001c0014 a0001c0017 a0001c0021 a0002c0007	a0001c0001t0008 a0001c0002t0001 a0001c0014t0016 others(3): Show a0001c0001t0008 a0001c0002t0001 a0001c0014t0016 a0001c0017t0008 a0001c0021t0002 a0002c0007t0023	a0001c0001t0008g0069 a0001c0002t0001g0013 a0001c0002t0001g0068 others(4): Show a0001c0001t0008g0069 a0001c0002t0001g0013 a0001c0002t0001g0068 a0001c0014t0016g0048 a0001c0017t0008g0092 a0001c0021t0002g0091 a0002c0007t0023g0085	7	98	0.0714	22	c.163 others(41): Show c.163+41407_163+41428dupCACACACACACACACACACACA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235571932	T T	TTGTGTGT others(15): Show TTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03453.hp1 NA20129.hp1 HG03453.hp1 NA20129.hp1	a0001 a0001	a0001c0003 a0001c0005 a0001c0003 a0001c0005	a0001c0003t0022 a0001c0005t0004 a0001c0003t0022 a0001c0005t0004	a0001c0003t0022g0055 a0001c0005t0004g0058 a0001c0003t0022g0055 a0001c0005t0004g0058	2	98	0.0204	22	c.163 others(41): Show c.163+77089_163+77110dupGTGTGTGTGTGTGTGTGTGTGT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235682797	C C	CGTGTGTG others(15): Show CGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0014 a0001c0002t0014	a0001c0002t0014g0076 a0001c0002t0014g0076	1	98	0.0102	22	c.164 others(41): Show c.164-26381_164-26360dupGTGTGTGTGTGTGTGTGTGTGT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235702934	G G	GTTTTTTT others(15): Show GTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG04199.hp1 HG01192.hp2 HG04199.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0004 a0001c0002 a0002c0004	a0001c0002t0001 a0002c0004t0006 a0001c0002t0001 a0002c0004t0006	a0001c0002t0001g0068 a0002c0004t0006g0042 a0001c0002t0001g0068 a0002c0004t0006g0042	2	98	0.0204	22	c.164 others(39): Show c.164-6233_164-6232insTTTTTTTTTTTTTTTTTTTTTT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235867536	A A	AGTGTGTG others(15): Show AGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG03486.hp2 HG02717.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0003 a0001c0003t0047 a0001c0001t0003 a0001c0003t0047	a0001c0001t0003g0090 a0001c0003t0047g0033 a0001c0001t0003g0090 a0001c0003t0047g0033	2	98	0.0204	22	c.105 others(43): Show c.1051-15791_1051-15770dupTGTGTGTGTGTGTGTGTGTGTG	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	9/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	236098620	C C	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0016 a0001c0016	a0001c0016t0007 a0001c0016t0007	a0001c0016t0007g0089 a0001c0016t0007g0089	1	98	0.0102	22	c.211 others(43): Show c.2115-21553_2115-21552insTTTTTTTTTTTTTTTTTTTTTT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	16/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP3_chr7_151081475_151149434	151105792	C C	CCACACAC others(15): Show CCACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG02486.hp1 HG03098.hp2 others(1): Show HG00140.hp1 HG02486.hp1 HG03098.hp2 NA20129.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0015 a0001c0001 a0006c0015	a0001c0001t0001 a0006c0015t0001 a0001c0001t0001 a0006c0015t0001	a0001c0001t0001g0083 a0001c0001t0001g0116 a0001c0001t0001g0117 others(1): Show a0001c0001t0001g0083 a0001c0001t0001g0116 a0001c0001t0001g0117 a0006c0015t0001g0124	4	354	0.0113	22	c.332 others(41): Show c.332-10982_332-10961dupCACACACACACACACACACACA	AGAP3	ENSG00000133612.20	transcript	ENST00000397238.7	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGAP9_chr10_47496854_47528638	47503937	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18953.hp1 NA19011.hp2 NA18953.hp1 NA19011.hp2	a0001 a0011 a0001 a0011	a0001c0001 a0011c0015 a0001c0001 a0011c0015	a0001c0001t0001 a0011c0015t0001 a0001c0001t0001 a0011c0015t0001	a0001c0001t0001g0052 a0011c0015t0001g0033 a0001c0001t0001g0052 a0011c0015t0001g0033	2	206	0.0097	22	c.585 others(37): Show c.585+230_585+251dupTTTTTTTTTTTTTTTTTTTTTT	AGAP9	ENSG00000204172.12	transcript	ENST00000452145.6	protein_coding	7/7			chr10	TogoVar
AGBL1_chr15_86074871_86921156	86298246	A A	AATATATA others(15): Show AATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0004 a0004	a0004c0020 a0004c0020	a0004c0020t0012 a0004c0020t0012	a0004c0020t0012g0073 a0004c0020t0012g0073	1	132	0.0076	22	c.237 others(41): Show c.2374+2851_2374+2872dupATATATATATATATATATATAT	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	17/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86298336	C C	CTATATAT others(15): Show CTATATATATATGAATATATTCT	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0113 a0001c0001t0003g0113	1	132	0.0076	22	c.237 others(41): Show c.2374+2970_2374+2991dupTCTTATATATATATGAATATAT	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	17/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86386208	T T	TCCCCCTC others(15): Show TCCCCCTCCCTCCTCCCCCCCTC	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0008 a0008	a0008c0030 a0008c0030	a0008c0030t0010 a0008c0030t0010	a0008c0030t0010g0002 a0008c0030t0010g0002	1	132	0.0076	22	c.237 others(43): Show c.2375-11154_2375-11153insCTCCCTCCTCCCCCCCTCCCCC	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	17/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86410807	G G	GATATATA others(15): Show GATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0110 a0001c0001t0001g0110	1	132	0.0076	22	c.255 others(43): Show c.2555+13275_2555+13296dupTATATATATATATATATATATA	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	18/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86670600	G G	GACACACA others(15): Show GACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0102 a0001c0001t0008g0102	1	132	0.0076	22	c.299 others(41): Show c.2995-3667_2995-3646dupCACACACACACACACACACACA	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	21/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86735653	G G	GATATATA others(15): Show GATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18747.hp2 NA19012.hp1 NA18747.hp2 NA19012.hp1	a0001 a0001	a0001c0008 a0001c0019 a0001c0008 a0001c0019	a0001c0008t0002 a0001c0019t0001 a0001c0008t0002 a0001c0019t0001	a0001c0008t0002g0034 a0001c0019t0001g0058 a0001c0008t0002g0034 a0001c0019t0001g0058	2	132	0.0152	22	c.315 others(43): Show c.3158+61218_3158+61219insTATATATATATATATATATATA	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	22/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86769174	A A	AGAGAGAG others(15): Show AGAGAGAGAGAGAGAGAAAGAGG	intron_variant intron_variant	MODIFIER	HG02735.hp2 HG03710.hp1 NA18943.hp2 others(3): Show HG02735.hp2 HG03710.hp1 NA18943.hp2 NA18944.hp1 NA18979.hp2 NA18994.hp1	a0001 a0011 a0021 a0001 a0011 a0021	a0001c0003 a0001c0006 a0001c0008 others(2): Show a0001c0003 a0001c0006 a0001c0008 a0011c0047 a0021c0048	a0001c0003t0057 a0001c0003t0063 a0001c0006t0036 others(3): Show a0001c0003t0057 a0001c0003t0063 a0001c0006t0036 a0001c0008t0001 a0011c0047t0004 a0021c0048t0002	a0001c0003t0057g0038 a0001c0003t0063g0023 a0001c0006t0036g0083 others(3): Show a0001c0003t0057g0038 a0001c0003t0063g0023 a0001c0006t0036g0083 a0001c0008t0001g0006 a0011c0047t0004g0086 a0021c0048t0002g0029	6	132	0.0455	22	c.315 others(43): Show c.3158+94739_3158+94740insAGAGAGAGAGAGAGAAAGAGGG	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	22/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL1_chr15_86074871_86921156	86827938	C C	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00738.hp2 HG01074.hp1 others(16): Show HG00323.hp2 HG00738.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01258.hp1 HG01496.hp1 HG01884.hp1 HG02647.hp1 HG02735.hp1 HG03017.hp1 HG03139.hp2 HG03453.hp2 HG03834.hp2 HG04204.hp2 NA18994.hp1 NA19012.hp2 NA19043.hp2	a0001 a0002 a0010 others(2): Show a0001 a0002 a0010 a0019 a0021	a0001c0001 a0001c0002 a0001c0003 others(11): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0006 a0001c0007 a0001c0010 a0001c0023 a0001c0024 a0002c0005 a0002c0018 a0010c0017 a0019c0027 a0021c0048	a0001c0001t0001 a0001c0002t0027 a0001c0003t0002 others(15): Show a0001c0001t0001 a0001c0002t0027 a0001c0003t0002 a0001c0003t0024 a0001c0004t0020 a0001c0004t0034 a0001c0006t0007 a0001c0006t0045 a0001c0007t0021 a0001c0007t0030 a0001c0010t0067 a0001c0023t0020 a0001c0024t0007 a0002c0005t0050 a0002c0018t0007 a0010c0017t0012 a0019c0027t0032 a0021c0048t0002	a0001c0001t0001g0109 a0001c0002t0027g0082 a0001c0003t0002g0046 others(16): Show a0001c0001t0001g0109 a0001c0002t0027g0082 a0001c0003t0002g0046 a0001c0003t0002g0047 a0001c0003t0024g0048 a0001c0004t0020g0080 a0001c0004t0034g0124 a0001c0006t0007g0018 a0001c0006t0045g0044 a0001c0007t0021g0096 a0001c0007t0030g0123 a0001c0010t0067g0069 a0001c0023t0020g0088 a0001c0024t0007g0025 a0002c0005t0050g0036 a0002c0018t0007g0037 a0010c0017t0012g0090 a0019c0027t0032g0116 a0021c0048t0002g0029	19	132	0.1439	22	c.315 others(43): Show c.3159-79129_3159-79128insTTTTTTTTTTTTTTTTTTTTTT	AGBL1	ENSG00000273540.5	transcript	ENST00000614907.3	protein_coding	22/22		INFO_REALIGN_3_PRIME	chr15	TogoVar
AGBL2_chr11_47654591_47720369	47678338	A A	ATTTTTTT others(15): Show ATTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG04199.hp2 HG04199.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0116 a0002c0002t0002g0116	1	356	0.0028	22	c.201 others(39): Show c.2017-938_2017-937insAAAAAAAAAAAAAAAAAAAAAA	AGBL2	ENSG00000165923.17	transcript	ENST00000525123.6	protein_coding	13/18			chr11	TogoVar
AGBL2_chr11_47654591_47720369	47691729	A A	AAAAAAAA others(15): Show AAAAAAAAAAAAAAAAAAAAAAT	intron_variant intron_variant	MODIFIER	NA18971.hp1 NA18971.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0106 a0002c0002t0002g0106	1	356	0.0028	22	c.848 others(37): Show c.848+373_848+374insATTTTTTTTTTTTTTTTTTTTT	AGBL2	ENSG00000165923.17	transcript	ENST00000525123.6	protein_coding	9/18			chr11	TogoVar

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